BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC135461.14 - phase: 0 /pseudo
(1361 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
GOB1_HUMAN (Q14789) Golgi autoantigen, golgin subfamily B member... 44 0.004
MYSP_TAESA (Q8T305) Paramyosin 42 0.015
MYSP_SCHMA (P06198) Paramyosin 42 0.015
MYSP_TAESO (P35418) Paramyosin (Antigen B) (AgB) 41 0.019
MYSP_SCHJA (Q05870) Paramyosin (Antigen Sj97) 41 0.019
ECX1_METMA (Q8PTT8) Probable exosome complex exonuclease 1 (EC 3... 40 0.033
RS3_HALN1 (P15009) 30S ribosomal protein S3P (HS4) (HHAS3) 40 0.043
MYH8_HUMAN (P13535) Myosin heavy chain, skeletal muscle, perinat... 40 0.043
MYSP_ECHGR (P35417) Paramyosin 40 0.057
IE68_SHV21 (Q01042) Immediate-early protein 40 0.057
PCN2_HUMAN (O95613) Pericentrin 2 (Pericentrin B) (Kendrin) 39 0.097
NRDC_RAT (P47245) Nardilysin precursor (EC 3.4.24.61) (N-arginin... 39 0.097
YDF3_SCHPO (Q10475) Probable eukaryotic initiation factor C17C9.03 39 0.13
MYH9_RAT (Q62812) Myosin heavy chain, nonmuscle type A (Cellular... 38 0.22
DIA1_HUMAN (O60610) Diaphanous protein homolog 1 (Diaphanous-rel... 38 0.22
PLE1_CRIGR (Q9JI55) Plectin 1 (PLTN) (PCN) (300-kDa intermediate... 37 0.28
USO1_YEAST (P25386) Intracellular protein transport protein USO1 37 0.37
MYSU_RABIT (Q99105) Myosin heavy chain, embryonic smooth muscle ... 37 0.37
Y343_METJA (Q57789) Hypothetical protein MJ0343 36 0.63
PLE1_RAT (P30427) Plectin 1 (PLTN) (PCN) 36 0.63
>GOB1_HUMAN (Q14789) Golgi autoantigen, golgin subfamily B member 1
(Giantin) (Macrogolgin) (Golgi complex-associated
protein, 372-kDa) (GCP372)
Length = 3259
Score = 43.5 bits (101), Expect = 0.004
Identities = 37/131 (28%), Positives = 65/131 (49%), Gaps = 9/131 (6%)
Query: 44 ISELLEVESKAAEAQETLEEESLAKVESEVRQELEQTLQGDDLETAVA-DEMAAFKEEWE 102
+ +LL+ E AAE + + + L ++E+E L T++ + E+ + ++M E +
Sbjct: 274 VVDLLQQELTAAEQRNQILSQQLQQMEAE-HNTLRNTVETEREESKILLEKMELEVAERK 332
Query: 103 AALDDLETESSHLLEQLDGAG---IELPSLYKLIEREAPDRCCTEAWKKRNHWVGSQATT 159
+ +L+ E HLLEQ + AG EL S Y +E++ E +K +H + Q T
Sbjct: 333 LSFHNLQEEMHHLLEQFEQAGQAQAELESRYSALEQKHK----AEMEEKTSHILSLQKTG 388
Query: 160 EIASSVSDAEK 170
+ S DA K
Sbjct: 389 QELQSACDALK 399
>MYSP_TAESA (Q8T305) Paramyosin
Length = 863
Score = 41.6 bits (96), Expect = 0.015
Identities = 39/172 (22%), Positives = 73/172 (41%), Gaps = 15/172 (8%)
Query: 49 EVESKAAEAQETLEEESLAKVESEVRQELEQTLQGDDLETAVADEMAAFKEEWEAALDDL 108
E+E + E E LE +L K + +EL T+ ++E +M+ K+++EA + +L
Sbjct: 483 EMEQRLREKDEELE--NLRKSTTRTIEELTTTIS--EMEVRFKSDMSRLKKKYEATISEL 538
Query: 109 ETE-------SSHLLEQLDGAGIELPSLYKLIEREAPDRCCTEAWKKRNHWVGSQATTEI 161
E + +++L + + L +E E R E+ N V + +
Sbjct: 539 EVQLDVANKANANLNRENKTLAQRVQELQAALEDERRAREAAES----NLQVSERKRIAL 594
Query: 162 ASSVSDAEKYLQINRPVRRRHGKLLEEGASGFLQKKISPETLEPGKKETEGD 213
AS V + L+++ R+ L + + +S TL K+ EGD
Sbjct: 595 ASEVEEIRSQLELSDRARKNAESELNDANGRISELTLSVNTLTNDKRRLEGD 646
>MYSP_SCHMA (P06198) Paramyosin
Length = 866
Score = 41.6 bits (96), Expect = 0.015
Identities = 41/182 (22%), Positives = 76/182 (41%), Gaps = 15/182 (8%)
Query: 49 EVESKAAEAQETLEEESLAKVESEVRQELEQTLQGDDLETAVADEMAAFKEEWEAALDDL 108
E+E + E E LE SL K + +EL T+ ++E E++ K+ +E+ + DL
Sbjct: 487 EMEQRLRERDEELE--SLRKSTTRTIEELTVTIT--EMEVKYKSELSRLKKRYESNIADL 542
Query: 109 ETE-------SSHLLEQLDGAGIELPSLYKLIEREAPDRCCTEAWKKRNHWVGSQATTEI 161
E + +++L+++ + L ++ E R E N + ++
Sbjct: 543 EIQLDTANKANANLMKENKNLSQRVKDLETFLDEERRLREAAE----NNLQITEHKRLQL 598
Query: 162 ASSVSDAEKYLQINRPVRRRHGKLLEEGASGFLQKKISPETLEPGKKETEGDWDVFNKII 221
A+ + + L+ +R+ LEE S + I TL K+ EGD V +
Sbjct: 599 ANEIEEIRSTLENLERLRKHAETELEEAQSRVSELTIQVNTLTNDKRRLEGDIGVMQADM 658
Query: 222 SD 223
D
Sbjct: 659 DD 660
>MYSP_TAESO (P35418) Paramyosin (Antigen B) (AgB)
Length = 863
Score = 41.2 bits (95), Expect = 0.019
Identities = 40/173 (23%), Positives = 74/173 (42%), Gaps = 17/173 (9%)
Query: 49 EVESKAAEAQETLEEESLAKVESEVRQELEQTLQGDDLETAVADEMAAFKEEWEAALDDL 108
E+E + E E LE +L K + +EL T+ ++E +M+ K+++EA + +L
Sbjct: 483 EMEQRLREKDEELE--NLRKSTTRTIEELTTTIS--EMEVRFKSDMSRLKKKYEATISEL 538
Query: 109 ETESSHLLEQLDGAGIELPSLYKLIEREA--------PDRCCTEAWKKRNHWVGSQATTE 160
E + L+ + A + L K + + +R EA + N V +
Sbjct: 539 EVQ----LDVANKANVNLNRENKTLAQRVQELQAALEDERRAREA-AESNLQVSERKRIA 593
Query: 161 IASSVSDAEKYLQINRPVRRRHGKLLEEGASGFLQKKISPETLEPGKKETEGD 213
+AS V + L+++ R+ L + + +S TL K+ EGD
Sbjct: 594 LASEVEEIRSQLELSDRARKNAESELNDANGRISELTLSVNTLTNDKRRLEGD 646
>MYSP_SCHJA (Q05870) Paramyosin (Antigen Sj97)
Length = 866
Score = 41.2 bits (95), Expect = 0.019
Identities = 41/182 (22%), Positives = 77/182 (41%), Gaps = 15/182 (8%)
Query: 49 EVESKAAEAQETLEEESLAKVESEVRQELEQTLQGDDLETAVADEMAAFKEEWEAALDDL 108
E+E + E E LE SL K + +EL T+ ++E E++ K+ +E+++ DL
Sbjct: 487 EMEQRLRERDEELE--SLRKSTTRTIEELTVTIT--EMEVKYKSELSRLKKRYESSIADL 542
Query: 109 ETE-------SSHLLEQLDGAGIELPSLYKLIEREAPDRCCTEAWKKRNHWVGSQATTEI 161
E + +++L+++ + L ++ E R E N + ++
Sbjct: 543 EIQLDATNKANANLMKENKNLAQRVKDLETFLDDERRLREAAE----NNLQITEHKRIQL 598
Query: 162 ASSVSDAEKYLQINRPVRRRHGKLLEEGASGFLQKKISPETLEPGKKETEGDWDVFNKII 221
A+ V + ++ +R+ LEE S + I TL K+ EGD V +
Sbjct: 599 ANEVEELRSAMENLERLRKHAETELEETQSRVSELTIQVNTLSNDKRRLEGDIGVMQADM 658
Query: 222 SD 223
D
Sbjct: 659 DD 660
>ECX1_METMA (Q8PTT8) Probable exosome complex exonuclease 1 (EC
3.1.13.-)
Length = 493
Score = 40.4 bits (93), Expect = 0.033
Identities = 47/189 (24%), Positives = 85/189 (44%), Gaps = 11/189 (5%)
Query: 46 ELLEVESKAAEAQETLEEESLAKVESEVRQELEQTLQGDDLETAVADEMAA-FKEEWEAA 104
E+LE AA +ET EE + E E+ +E+E + ++ DE+ +EE E +
Sbjct: 257 EVLEPSPVAAIVEETPEEAE--EPEVEISEEVEAEILASEVIPDFEDELEEEIEEELEES 314
Query: 105 LDDLETESSHLLEQ-LDGAGIELPSLYKLIEREAPDRCCTEAWKKRNHWVGSQAT---TE 160
+DLETE E+ L+ L + +E + + E + +A TE
Sbjct: 315 EEDLETEEEEFEEEALEEEAEPEEDLEEDLEEDLGEELEEEEEELEEEEFEEEALEEETE 374
Query: 161 IASSVSDAEKYLQINRPVRRRHGKLLEEGASGFLQKKISPETLEPGKKETEGDWDVFNKI 220
+ +S+ A + + + R L +E AS +++I PE E ++ E + ++
Sbjct: 375 LEASLECAPELKEFDEIEAR----LEKEDASIEAEEEIEPEAEEATEEGLEEEAEIEETA 430
Query: 221 ISDESGIDA 229
S+E I+A
Sbjct: 431 ASEEENIEA 439
Score = 37.4 bits (85), Expect = 0.28
Identities = 46/187 (24%), Positives = 78/187 (41%), Gaps = 19/187 (10%)
Query: 49 EVESKAAEAQETLE------EESLAKVESEVRQELEQTLQGDDLETAVADEMAAFKEEWE 102
E+E + E++E LE EE + E+E ++LE+ L+ D E +E +EE+E
Sbjct: 306 EIEEELEESEEDLETEEEEFEEEALEEEAEPEEDLEEDLEEDLGEELEEEEEELEEEEFE 365
Query: 103 AALDDLETESSHLLEQLDGAGIELPSLYKLIEREAPDRCCTEAWKKRNHWVGSQATTEIA 162
+ ETE LE EL ++ R + EA ++ +AT E
Sbjct: 366 EEALEEETELEASLE----CAPELKEFDEIEARLEKEDASIEA-EEEIEPEAEEATEEGL 420
Query: 163 SSVSDAEKYLQINRPVRRRHGKLLEEGASGFLQKKISPET----LEPGKKETEGDWDVFN 218
++ E+ + EE ++IS E EP ++++EG W
Sbjct: 421 EEEAEIEETAASEEENIEAEAEAEEEAEPEVEAEEISTEAEEAEEEPEEEKSEGPW---- 476
Query: 219 KIISDES 225
K++ D S
Sbjct: 477 KVVKDPS 483
>RS3_HALN1 (P15009) 30S ribosomal protein S3P (HS4) (HHAS3)
Length = 302
Score = 40.0 bits (92), Expect = 0.043
Identities = 28/84 (33%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
Query: 56 EAQETLEEESLAKVESEVRQELEQTLQGDDLETAVADEMAAFKEEWEAALDDLETESSHL 115
E QE + E L E+E ++LE+ L+G+D + AD AA + E E A + E +
Sbjct: 194 EIQEDADIEDLVVDEAEAGEDLEELLEGEDADAEDADADAAAEPESEPA----DFEDEEV 249
Query: 116 LEQLDGAGIELPSLYKLIEREAPD 139
+E D EL L +E E D
Sbjct: 250 IETDDDVEEELDELADAVEGEDED 273
>MYH8_HUMAN (P13535) Myosin heavy chain, skeletal muscle, perinatal
(MyHC-perinatal)
Length = 1937
Score = 40.0 bits (92), Expect = 0.043
Identities = 53/196 (27%), Positives = 91/196 (46%), Gaps = 32/196 (16%)
Query: 47 LLEVE-SKAAEAQETLEEESLAKVESEVRQELEQT---LQGDDLET-AVADEMAAFKEEW 101
+L+VE S AA A ++ + KV SE +Q+ E+T L+ E+ +++ E+ K +
Sbjct: 1432 MLDVERSNAACAALDKKQRNFDKVLSEWKQKYEETQAELEASQKESRSLSTELFKVKNVY 1491
Query: 102 EAALDDLET----------ESSHLLEQLDGAGIELPSLYKLIEREAPDRC-----CTEAW 146
E +LD LET E S L EQ+ G ++ L K+ ++ ++C EA
Sbjct: 1492 EESLDQLETLRRENKNLQQEISDLTEQIAEGGKQIHELEKIKKQVEQEKCEIQAALEEAE 1551
Query: 147 KKRNHWVG---------SQATTEIASSVSDAEKYLQINRPVRRRHGKLLEEGASGFLQKK 197
H G +Q +E+ + AEK +I++ ++R H +++E S +
Sbjct: 1552 ASLEHEEGKILRIQLELNQVKSEVDRKI--AEKDEEIDQ-LKRNHTRVVETMQSTLDAEI 1608
Query: 198 ISPETLEPGKKETEGD 213
S KK+ EGD
Sbjct: 1609 RSRNDALRVKKKMEGD 1624
>MYSP_ECHGR (P35417) Paramyosin
Length = 863
Score = 39.7 bits (91), Expect = 0.057
Identities = 38/172 (22%), Positives = 71/172 (41%), Gaps = 15/172 (8%)
Query: 49 EVESKAAEAQETLEEESLAKVESEVRQELEQTLQGDDLETAVADEMAAFKEEWEAALDDL 108
E+E + E E LE +L K + +EL T+ ++E +M+ K+++EA + +L
Sbjct: 483 EMEQRLREKDEELE--NLRKSTTRTIEELTTTIS--EMEVRFKSDMSRLKKKYEATISEL 538
Query: 109 ETE-------SSHLLEQLDGAGIELPSLYKLIEREAPDRCCTEAWKKRNHWVGSQATTEI 161
E + ++ L + + L +E E R E+ N V + +
Sbjct: 539 EVQLDVANKANASLNRENKALAQRVQELQTALEDERRAREAAES----NLQVSERKRIAL 594
Query: 162 ASSVSDAEKYLQINRPVRRRHGKLLEEGASGFLQKKISPETLEPGKKETEGD 213
S V + L+++ R+ L + + +S TL K+ EGD
Sbjct: 595 TSEVEEIRSQLELSDRARKNAESELNDANGRISELTMSVNTLTNDKRRLEGD 646
>IE68_SHV21 (Q01042) Immediate-early protein
Length = 407
Score = 39.7 bits (91), Expect = 0.057
Identities = 30/90 (33%), Positives = 46/90 (50%), Gaps = 3/90 (3%)
Query: 46 ELLEVESKAAEAQETLEEESLAKVESEVRQELEQTLQGDDLETAVADEMAAFKEEWEAAL 105
E E +A EA+E EEE+ E+E +E E+ + + E A+E A EE E A
Sbjct: 166 EAEEEAEEAEEAEEEAEEEAEEAEEAEEAEEAEEEAEEAEEEAEEAEEEAEEAEEAEEA- 224
Query: 106 DDLETESSHLLEQLDGAGIELPSL--YKLI 133
++ E E+ E+ + AG P L YK++
Sbjct: 225 EEAEEEAEEAEEEEEEAGPSTPRLPHYKVV 254
Score = 37.0 bits (84), Expect = 0.37
Identities = 31/122 (25%), Positives = 52/122 (42%), Gaps = 2/122 (1%)
Query: 51 ESKAAEAQETLEEESLAKVESEVRQELEQTLQGDDLETAVADEMAAFKE--EWEAALDDL 108
E +A EA+E EEE + E+E + E+ + ++ E A +E +E E E A ++
Sbjct: 108 EEEAEEAEEEAEEEEAEEAEAEEEEAEEEEAEEEEAEEAEEEEAEEAEEEAEEEEAEEEA 167
Query: 109 ETESSHLLEQLDGAGIELPSLYKLIEREAPDRCCTEAWKKRNHWVGSQATTEIASSVSDA 168
E E+ E + A E + E E + EA ++ E A +A
Sbjct: 168 EEEAEEAEEAEEEAEEEAEEAEEAEEAEEAEEEAEEAEEEAEEAEEEAEEAEEAEEAEEA 227
Query: 169 EK 170
E+
Sbjct: 228 EE 229
>PCN2_HUMAN (O95613) Pericentrin 2 (Pericentrin B) (Kendrin)
Length = 3336
Score = 38.9 bits (89), Expect = 0.097
Identities = 53/169 (31%), Positives = 70/169 (41%), Gaps = 19/169 (11%)
Query: 46 ELLEVESKAAEAQETLEEESLAKVESEVRQELEQ-TLQGDDLETAVADEMAAFKEEWEAA 104
E +V K E E L+EES AK E + Q TL+G +ETA E+ A KE+ E
Sbjct: 1301 ETAQVVRKHQELLECLKEESAAKAELALELHKTQGTLEGFKVETADLKEVLAGKEDSEHR 1360
Query: 105 LDDLETESSHLLEQLDGAGIELPSLYKLIEREAPDRCCTEAWKKRNHWVGSQATTEIASS 164
L LE ES L QL A E +L RE CT W + G T+ +
Sbjct: 1361 L-VLELES--LRRQLQQAAQEQAAL-----REE----CTRLWSR-----GEATATDAEAR 1403
Query: 165 VSDAEKYLQINRPVRRRHGKLLEEGASGFL-QKKISPETLEPGKKETEG 212
+ K ++ + K E+ S L Q KI LE + G
Sbjct: 1404 EAALRKEVEDLTKEQSETRKQAEKDRSALLSQMKILESELEEQLSQHRG 1452
>NRDC_RAT (P47245) Nardilysin precursor (EC 3.4.24.61) (N-arginine
dibasic convertase) (NRD convertase) (NRD-C)
Length = 1161
Score = 38.9 bits (89), Expect = 0.097
Identities = 33/109 (30%), Positives = 47/109 (42%), Gaps = 6/109 (5%)
Query: 28 RDLRLLILMTNCILSLISELLEVESKAAEAQETLEEESLAKVESEVRQELEQTLQGDDLE 87
+ R + L LIS+L VE K A + EEE + E E +E E+ DD E
Sbjct: 108 KQYRYIKLQNGLQALLISDLSNVEGKTGNATDEEEEEEEEEEEGEEEEEEEEDDDDDDDE 167
Query: 88 TAVADEMAAFKEEWEAALDDLE--TESSHLLEQLDGAGIELPSLYKLIE 134
D A +++ E DD E + H + LD EL L + +E
Sbjct: 168 ----DSGAEIQDDDEEGFDDEEEFDDDEHDDDDLDNEENELEELEERVE 212
>YDF3_SCHPO (Q10475) Probable eukaryotic initiation factor C17C9.03
Length = 1403
Score = 38.5 bits (88), Expect = 0.13
Identities = 56/248 (22%), Positives = 97/248 (38%), Gaps = 22/248 (8%)
Query: 51 ESKAAEAQETLEEESLAKVESEVRQELEQTLQGDDLETAVAD-EMAAFKEEWEAALDDLE 109
E AEA+ EE++ + E ++E E+ + + E A + E A +E E A + E
Sbjct: 539 EKAEAEAKRKAEEKARLEAEENAKREAEEQAKREAEEKAKREAEEKAKREAEEKAKREAE 598
Query: 110 TESSHLLEQLDGAGIELPSLYKLIE---REAPDRCCTEAWKKRNHWVGSQATTEIASSVS 166
+ E+ E + + E REA ++ EA +K +A E A +
Sbjct: 599 ENAKREAEEKAKREAEEKAKREAEEKAKREAEEKAKREAEEKAKREAEEKAKRE-AEEKA 657
Query: 167 DAEKYLQINRPVRRRHGKLLEEGASGFLQKKISPETLEPGKKETEGDWDVFNKIISDESG 226
E R + + EE A ++K+ ET E K++ E +E
Sbjct: 658 KREAEENAKREAEEKAKREAEENAKREAEEKVKRETEENAKRKAE-----------EEGK 706
Query: 227 IDASFGSKTWASVYLAS------TPQQAALIGLEFPGVNEVEEIDDIDGNSTDPFVAAAI 280
+A + +S LAS T +Q E +VE++ +G ST + +
Sbjct: 707 READKNPEIKSSAPLASSEANVDTSKQTNATEPEVVDKTKVEKLKASEGKSTSSLSSPSH 766
Query: 281 ANEKELDL 288
+ + DL
Sbjct: 767 STSSKRDL 774
>MYH9_RAT (Q62812) Myosin heavy chain, nonmuscle type A (Cellular
myosin heavy chain, type A) (Nonmuscle myosin heavy
chain-A) (NMMHC-A)
Length = 1961
Score = 37.7 bits (86), Expect = 0.22
Identities = 57/234 (24%), Positives = 101/234 (42%), Gaps = 59/234 (25%)
Query: 35 LMTNCILSLISELLEVESKAA---------EAQETLEEESLAKVESEVRQELEQT---LQ 82
L+ + + ++L+E E K+ EA T EE L + E + RQELE+T L+
Sbjct: 996 LLEDRVAEFTTDLMEEEEKSKSLAKLKNKHEAMITDLEERLRREEKQ-RQELEKTRRKLE 1054
Query: 83 GD--DLETAVAD----------EMAAFKEEWEAALDDLETESSH---LLEQLDGAGIELP 127
GD DL +A+ ++A +EE +AAL +E E++ L+++ ++
Sbjct: 1055 GDSTDLSDQIAELQAQIAELKMQLAKKEEELQAALARVEEEAAQKNMALKKIRELETQIS 1114
Query: 128 SLYKLIEREAPDRCCTEAWKKRNHWVGSQAT---TEIASSVSD--AEKYLQINRP----- 177
L + +E E R C +K+ +G + TE+ ++ A++ L+ R
Sbjct: 1115 ELQEDLESE---RACRNKAEKQKRDLGEELEALKTELEDTLDSTAAQQELRSKREQEVSI 1171
Query: 178 ------------------VRRRHGKLLEEGASGFLQKKISPETLEPGKKETEGD 213
+R++H + +EE A Q K TLE K+ E +
Sbjct: 1172 LKKTLEDEAKTHEAQIQEMRQKHSQAVEELAEQLEQTKRVKATLEKAKQTLENE 1225
>DIA1_HUMAN (O60610) Diaphanous protein homolog 1
(Diaphanous-related formin 1) (DRF1)
Length = 1248
Score = 37.7 bits (86), Expect = 0.22
Identities = 29/89 (32%), Positives = 49/89 (54%), Gaps = 11/89 (12%)
Query: 51 ESKAAEAQETLEEE---------SLAKVESEVRQELEQTLQGD-DLETAVADEMAAFKEE 100
E+KAAE ++ L+ E + K+ES+ Q+L Q LQG+ D + ++A K++
Sbjct: 469 EAKAAELEKKLDSELTARHELQVEMKKMESDFEQKL-QDLQGEKDALHSEKQQIATEKQD 527
Query: 101 WEAALDDLETESSHLLEQLDGAGIELPSL 129
EA + L E + L ++L+ A E+ SL
Sbjct: 528 LEAEVSQLTGEVAKLTKELEDAKKEMASL 556
>PLE1_CRIGR (Q9JI55) Plectin 1 (PLTN) (PCN) (300-kDa intermediate
filament-associated protein) (IFAP300) (Fragment)
Length = 4473
Score = 37.4 bits (85), Expect = 0.28
Identities = 43/168 (25%), Positives = 73/168 (42%), Gaps = 8/168 (4%)
Query: 48 LEVESKAAEAQETLEEESLAKVESEVRQELEQTLQGDD--LETAVADEMAAFK--EEWEA 103
L++ +AA+ + EE++ A V + +EL+QTLQ + LE + AA + EE E
Sbjct: 1962 LQLAQEAAQKRLQAEEKAHAFVVQQREEELQQTLQQEQSMLERLRGEAEAARRAAEEAEE 2021
Query: 104 ALDDLETESSHLLEQLDGAGIELPSLYKLIEREAPDRCCTEAWKKRNHWVGSQATTEIAS 163
A + E E++ +Q++ E L + E +A R +A ++ Q A
Sbjct: 2022 AREQAEREAAQSRKQVE----EAERLKQSAEEQAQARAQAQAAAEKLRKEAEQEAARRAQ 2077
Query: 164 SVSDAEKYLQINRPVRRRHGKLLEEGASGFLQKKISPETLEPGKKETE 211
+ A K Q +H K E+ Q + TL +ET+
Sbjct: 2078 AEQAALKQKQAADAEMEKHKKFAEQTLRQKAQVEQELTTLRLQLEETD 2125
Score = 32.3 bits (72), Expect = 9.0
Identities = 40/188 (21%), Positives = 75/188 (39%), Gaps = 26/188 (13%)
Query: 48 LEVESKAAEAQE------TLEEESLAKVESEVRQELEQTLQGDDLETAVADEMAAFKEEW 101
L V+++A AQE LEE L E+E R Q + ++ A+ + + E
Sbjct: 1445 LRVKAQAEAAQEKQRALQALEELRLQAEEAERRLRQAQAERARQVQVALETAQRSAEVEL 1504
Query: 102 EAALDDLETESSHLLEQLDGAGIELPSLYKLIEREA-----PDRCCTEAWKKRNHW---- 152
++ +++ L L + + L + ER A +R EA ++ W
Sbjct: 1505 QSKRASFAEKTAQLERTLQEEHVTVTQLREKAERRAQQQAEAERAREEAERELERWQLKA 1564
Query: 153 --------VGSQATTEIASSVSDAEKYLQINRPVRRRHGKLLEEGASGFLQKKISPETLE 204
+ + + + +DAEK + RR GK E+ Q++++ + LE
Sbjct: 1565 NEALRLRLQAEEVAQQRSLAQADAEKQKEEAEREARRRGKAEEQAVR---QRELAEQELE 1621
Query: 205 PGKKETEG 212
++ EG
Sbjct: 1622 KQRQLAEG 1629
>USO1_YEAST (P25386) Intracellular protein transport protein USO1
Length = 1790
Score = 37.0 bits (84), Expect = 0.37
Identities = 34/146 (23%), Positives = 59/146 (40%), Gaps = 2/146 (1%)
Query: 53 KAAEAQETLEEESLAKVESEVRQ--ELEQTLQGDDLETAVADEMAAFKEEWEAALDDLET 110
K E E ES+ VESE + EL+ + E + ++ E+ + +L+
Sbjct: 1237 KKNETNEASLLESIKSVESETVKIKELQDECNFKEKEVSELEDKLKASEDKNSKYLELQK 1296
Query: 111 ESSHLLEQLDGAGIELPSLYKLIEREAPDRCCTEAWKKRNHWVGSQATTEIASSVSDAEK 170
ES + E+LD EL + I + + +E+ R S+ + +
Sbjct: 1297 ESEKIKEELDAKTTELKIQLEKITNLSKAKEKSESELSRLKKTSSEERKNAEEQLEKLKN 1356
Query: 171 YLQINRPVRRRHGKLLEEGASGFLQK 196
+QI + KLL EG+S Q+
Sbjct: 1357 EIQIKNQAFEKERKLLNEGSSTITQE 1382
>MYSU_RABIT (Q99105) Myosin heavy chain, embryonic smooth muscle
isoform (Fragment)
Length = 501
Score = 37.0 bits (84), Expect = 0.37
Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Query: 59 ETLEEESLAKVESEVRQELEQTLQGDDLETAVADEMAAFKEEWEAALDDLETESSHLLEQ 118
E E S A+ RQ+LE+ Q DL+ + + A K +++A + LE + L EQ
Sbjct: 297 ELAAERSAAQKSDNARQQLER--QNKDLKAKLQELEGAVKSKFKATISALEAKIGQLEEQ 354
Query: 119 LDGAGIELPSLYKLIER 135
L+ E + KL+ R
Sbjct: 355 LEQEAKERAAANKLVRR 371
>Y343_METJA (Q57789) Hypothetical protein MJ0343
Length = 849
Score = 36.2 bits (82), Expect = 0.63
Identities = 41/163 (25%), Positives = 69/163 (42%), Gaps = 26/163 (15%)
Query: 41 LSLISELLEVESKAAEAQETLEEESLAKVESEVRQELEQTLQGDDLETAVAD-------- 92
L I LE+ES + L+E K E E + + ++ +LE AD
Sbjct: 29 LEKIKSKLEIESNINAVIKQLDELKNVKSEVEFKSNINMIIR--ELEEIEADASKMNINF 86
Query: 93 --EMAAFKEEWEAALD---DLETESSHLLEQLDGAGIELPSLYKLIEREAPDRCCTEAWK 147
+++ K E E + D++T + +L+Q++ EL + + DR TE K
Sbjct: 87 DYDLSKLKSELEQLKNTKIDIKTNTDQILKQINKIKSELSEKQTIRAKVEVDR--TEWDK 144
Query: 148 KRNHWVGS---QATTEIAS------SVSDAEKYLQINRPVRRR 181
+ W A ++AS +SDAEKY ++ +R R
Sbjct: 145 LKKEWSEKYHINAIADVASVGTAYMGISDAEKYNELMTILRER 187
>PLE1_RAT (P30427) Plectin 1 (PLTN) (PCN)
Length = 4687
Score = 36.2 bits (82), Expect = 0.63
Identities = 42/168 (25%), Positives = 74/168 (44%), Gaps = 8/168 (4%)
Query: 48 LEVESKAAEAQETLEEESLAKVESEVRQELEQTLQGDD--LETAVADEMAAFK--EEWEA 103
L++ +AA+ + EE++ A V + +EL+QTLQ + LE ++ AA + EE E
Sbjct: 2176 LQLAQEAAQKRLQAEEKAHAFVVQQREEELQQTLQQEQNMLERLRSEAEAARRAAEEAEE 2235
Query: 104 ALDDLETESSHLLEQLDGAGIELPSLYKLIEREAPDRCCTEAWKKRNHWVGSQATTEIAS 163
A + E E++ +Q++ E L + E +A + +A ++ Q A
Sbjct: 2236 AREQAEREAAQSRKQVE----EAERLKQSAEEQAQAQAQAQAAAEKLRKEAEQEAARRAQ 2291
Query: 164 SVSDAEKYLQINRPVRRRHGKLLEEGASGFLQKKISPETLEPGKKETE 211
+ A K Q +H K E+ Q + TL +ET+
Sbjct: 2292 AEQAALKQKQAADAEMEKHKKFAEQTLRQKAQVEQELTTLRLQLEETD 2339
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.362 0.161 0.621
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 128,763,988
Number of Sequences: 164201
Number of extensions: 4665116
Number of successful extensions: 26104
Number of sequences better than 10.0: 80
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 75
Number of HSP's that attempted gapping in prelim test: 25808
Number of HSP's gapped (non-prelim): 301
length of query: 1361
length of database: 59,974,054
effective HSP length: 123
effective length of query: 1238
effective length of database: 39,777,331
effective search space: 49244335778
effective search space used: 49244335778
T: 11
A: 40
X1: 14 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 37 (22.0 bits)
S2: 72 (32.3 bits)
Medicago: description of AC135461.14