BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC135461.13 + phase: 0 
         (560 letters)

Database: sprot 
           164,201 sequences; 59,974,054 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

YG3H_YEAST (P53285) Hypothetical 54.5 kDa protein in CBF2-SKN1 i...    52  4e-06
TRME_UREPA (Q9PRC7) Probable tRNA modification GTPase trmE             35  0.40
PELE_ERWCH (P04960) Pectate lyase E precursor (EC 4.2.2.2)             34  0.88
Y912_MYCBO (P64744) Hypothetical protein Mb0912                        32  4.4
Y888_MYCTU (P64743) Hypothetical protein Rv0888/MT0911                 32  4.4
RNG1_HUMAN (Q06587) Polycomb complex protein RING1 (RNF1)              32  4.4
KNT2_RAT (P08932) T-kininogen II precursor (Major acute phase pr...    31  7.5
IDE3_ERYVA (P81366) Trypsin inhibitor DE-3 (ETIA)                      31  7.5
ZCC2_HUMAN (Q7Z2W4) Zinc finger CCCH type antiviral protein 1 (Z...    31  9.8

>YG3H_YEAST (P53285) Hypothetical 54.5 kDa protein in CBF2-SKN1
           intergenic region
          Length = 467

 Score = 52.0 bits (123), Expect = 4e-06
 Identities = 52/217 (23%), Positives = 82/217 (36%), Gaps = 41/217 (18%)

Query: 264 PTVYFHPDEKYMPSSVSWFFKNGAILYTAGNA--------KGKAIDYHGTNLPGGGY--- 312
           P ++ + +EKY P+ V  F K   +   +G               +Y+   L  G +   
Sbjct: 92  PLLHLYSEEKYWPADVKDFVKRFQLRDHSGEKIINEHLRDLSDLQEYYSVELENGTWGRV 151

Query: 313 -NDGAFWIDLPTDEDARSNLKKGNIESAELYVHVKPAL------GGAFTDIAMWVFCPFN 365
            ++G +   L   +     L     E    ++   PA+      G  + D   + F PFN
Sbjct: 152 SSEGTYMTSLDDFDKGPDWLLGEQPEYGTGHIKKAPAVLFVVDKGNGWVDAFWFYFYPFN 211

Query: 366 -GPATLKVSLMNIEMNKIGEHVGDWEHFTLRVSNFTGELWSVFFSEHSGGKWVNAFDLEF 424
            GP  +            G HVGDWEH  +R   + GE   ++ S H GG       +E 
Sbjct: 212 WGPYIMG-------SGPWGNHVGDWEHSLVRF--YKGEPQYLWMSAHGGGSAYKFEAIEK 262

Query: 425 IKE-------------NKPIVYSSRHGHASYPHAGTY 448
           IK               KP+++S+R  HA Y   G +
Sbjct: 263 IKRLRRVDGKLTNEVIKKPLIFSARGTHAHYASVGQH 299


>TRME_UREPA (Q9PRC7) Probable tRNA modification GTPase trmE
          Length = 438

 Score = 35.4 bits (80), Expect = 0.40
 Identities = 18/66 (27%), Positives = 31/66 (46%)

Query: 173 VRCVRTDLTEVCETSDLLLTIKSKKNSFQVWNTQPCDRGMLARGVSVGTFFCGTYFDSEQ 232
           +  +R    +  E  + + TIK KK +F++W T   D   +   V + TF     F  E 
Sbjct: 16  IHIIRVSGPKAFEIINKISTIKIKKETFKIWYTILKDDNQILDEVLINTFVAPKTFTGED 75

Query: 233 VVDVVC 238
           +V++ C
Sbjct: 76  LVEINC 81


>PELE_ERWCH (P04960) Pectate lyase E precursor (EC 4.2.2.2)
          Length = 385

 Score = 34.3 bits (77), Expect = 0.88
 Identities = 22/76 (28%), Positives = 36/76 (46%), Gaps = 6/76 (7%)

Query: 34  QGGGFAGGRISLGKIEVTKVNKFEKVWRCTNSNGKALGFTFYRPLEIPDGFSCLGYYCHS 93
           Q GG  GG  +   +EV  ++ F+K    T+S+ K +  T   P++I  G +    Y   
Sbjct: 44  QNGGTTGGAKAAKAVEVKNISDFKKALNGTDSSAKIIKVT--GPIDISGGKA----YTSF 97

Query: 94  NDQPLRGHVLVARETT 109
           +DQ  R  + +   TT
Sbjct: 98  DDQKARSQISIPSNTT 113


>Y912_MYCBO (P64744) Hypothetical protein Mb0912
          Length = 490

 Score = 32.0 bits (71), Expect = 4.4
 Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 3/68 (4%)

Query: 28  PLPQWPQGGGFAGGRISLGKIEVTKVNKFEKVWRCTNSNGKAL-GFTFYRPLEIPDGFSC 86
           P   WP G  F+ G  +L + +V ++++ +  + CT+ N   L GFT Y  + +P G + 
Sbjct: 290 PTLLWPIGVPFSDGLNTLSEFKVQRLDR-QTWYECTSDNCLTLKGFT-YSQMRLPGGDTV 347

Query: 87  LGYYCHSN 94
             Y  H+N
Sbjct: 348 DVYNLHTN 355


>Y888_MYCTU (P64743) Hypothetical protein Rv0888/MT0911
          Length = 490

 Score = 32.0 bits (71), Expect = 4.4
 Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 3/68 (4%)

Query: 28  PLPQWPQGGGFAGGRISLGKIEVTKVNKFEKVWRCTNSNGKAL-GFTFYRPLEIPDGFSC 86
           P   WP G  F+ G  +L + +V ++++ +  + CT+ N   L GFT Y  + +P G + 
Sbjct: 290 PTLLWPIGVPFSDGLNTLSEFKVQRLDR-QTWYECTSDNCLTLKGFT-YSQMRLPGGDTV 347

Query: 87  LGYYCHSN 94
             Y  H+N
Sbjct: 348 DVYNLHTN 355


>RNG1_HUMAN (Q06587) Polycomb complex protein RING1 (RNF1)
          Length = 377

 Score = 32.0 bits (71), Expect = 4.4
 Identities = 14/33 (42%), Positives = 17/33 (51%)

Query: 14  EFFDSDPLPFSLPSPLPQWPQGGGFAGGRISLG 46
           E   SD  P S P P P+ P+GGG  G  +  G
Sbjct: 155 EDVSSDSAPDSAPGPAPKRPRGGGAGGSSVGTG 187


>KNT2_RAT (P08932) T-kininogen II precursor (Major acute phase
           protein) (Alpha-1-MAP) (Thiostatin) [Contains: T-kinin]
          Length = 430

 Score = 31.2 bits (69), Expect = 7.5
 Identities = 24/84 (28%), Positives = 35/84 (41%), Gaps = 4/84 (4%)

Query: 120 ESPALKKPLNYSLIWCMDSHDECVYFWLPNPPKGYKAVGIVVTTNPDEPKAEEVRC---V 176
           +SP LK+ L +S+      H+   YF +    K    V +  T    E  A E  C    
Sbjct: 273 DSPELKEALGHSIAQLNAQHNHLFYFKIDTVKKATSQV-VAGTKYVIEFIARETNCSKQT 331

Query: 177 RTDLTEVCETSDLLLTIKSKKNSF 200
            T+LT  CET  L  ++    N +
Sbjct: 332 NTELTADCETKHLGQSLNCNANVY 355


>IDE3_ERYVA (P81366) Trypsin inhibitor DE-3 (ETIA)
          Length = 172

 Score = 31.2 bits (69), Expect = 7.5
 Identities = 38/150 (25%), Positives = 57/150 (37%), Gaps = 20/150 (13%)

Query: 29  LPQ-WPQGGGFAGGRISLGKIEVTKVNKFEKVWRCTNSNGKALGF-TFYRPLEIPDGFSC 86
           LPQ W QGGG    +       +T V    ++     SNGK +   +  R   IPD    
Sbjct: 19  LPQVWAQGGGVQLAKTGEETCPLTVVQSPNEL-----SNGKPIRIESRLRSAFIPDDDKV 73

Query: 87  -LGYYCHSNDQPLRGHVLVARETTSKSQADCSESESPALKKPL----------NYSLIWC 135
            +G+       P     ++  E    S    SE ES     P           +Y L++C
Sbjct: 74  RIGFAYAPKCAPSPWWTVLEDEQEGLS-VKLSEDESTQFDYPFKFEQVSDKLHSYKLLYC 132

Query: 136 MDSHDECVYFWLPNPPKGYKAVGIVVTTNP 165
              H++C    +    KGY+ + +V   NP
Sbjct: 133 EGKHEKCASIGINRDQKGYRRL-VVTEDNP 161


>ZCC2_HUMAN (Q7Z2W4) Zinc finger CCCH type antiviral protein 1 (Zinc
           finger CCCH type domain containing protein 2) (PRO1677)
          Length = 902

 Score = 30.8 bits (68), Expect = 9.8
 Identities = 22/75 (29%), Positives = 32/75 (42%), Gaps = 9/75 (12%)

Query: 227 YFDSEQVVDVVCLKNLDSLLHAMPNLNQIHALIEHYGPTVYFHPDEKYMPSSVSWFFKNG 286
           Y  S   V+ +C  N DS LH      + H     YG  +YF  D  Y   +  +  KN 
Sbjct: 787 YATSRAYVESICSNNFDSFLH------ETHE--NKYGKGIYFAKDAIYSHKNCPYDAKN- 837

Query: 287 AILYTAGNAKGKAID 301
            +++ A    GK I+
Sbjct: 838 VVMFVAQVLVGKFIE 852


  Database: sprot
    Posted date:  Nov 25, 2004 10:54 AM
  Number of letters in database: 59,974,054
  Number of sequences in database:  164,201
  
Lambda     K      H
   0.320    0.139    0.449 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 76,038,940
Number of Sequences: 164201
Number of extensions: 3504179
Number of successful extensions: 6945
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 6941
Number of HSP's gapped (non-prelim): 9
length of query: 560
length of database: 59,974,054
effective HSP length: 115
effective length of query: 445
effective length of database: 41,090,939
effective search space: 18285467855
effective search space used: 18285467855
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 68 (30.8 bits)