BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC135320.16 + phase: 0
(153 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
FER_MASLA (P00248) Ferredoxin 95 7e-20
FER1_NOSMU (P00252) Ferredoxin I 94 1e-19
FER_SYNEL (P00256) Ferredoxin I 92 6e-19
FER_CHLFR (P00247) Ferredoxin 91 8e-19
FER_SYNLI (P00255) Ferredoxin 91 1e-18
FER1_PLEBO (Q51577) Ferredoxin I (FdI) 91 1e-18
FER1_APHFL (P00244) Ferredoxin I 90 2e-18
FER2_SYNP6 (P08451) Ferredoxin II 88 6e-18
FER2_RAPSA (P14937) Ferredoxin, root R-B2 88 8e-18
FER_NOSMU (P00253) Ferredoxin 87 1e-17
FER1_ANASP (P06543) Ferredoxin I 87 1e-17
FER1_ANAVA (P00254) Ferredoxin I 87 1e-17
FER_SPIPL (P00246) Ferredoxin 86 2e-17
FER_SYNP4 (P15788) Ferredoxin 86 3e-17
FER_SPIMA (P00245) Ferredoxin 86 4e-17
FER1_CYAPA (P17007) Ferredoxin I 84 9e-17
FER_HORVU (P83522) Ferredoxin 83 3e-16
FER1_SYNP7 (P06517) Ferredoxin I 83 3e-16
FER1_CYACA (Q9TLW0) Ferredoxin 83 3e-16
FER_SYNY3 (P27320) Ferredoxin I 82 3e-16
>FER_MASLA (P00248) Ferredoxin
Length = 98
Score = 94.7 bits (234), Expect = 7e-20
Identities = 47/97 (48%), Positives = 62/97 (63%), Gaps = 3/97 (3%)
Query: 50 SSYKVVI--EHEGKTTQLEVEPDETILSKALDSGLDVPHDCKLGVCMTCPARLISGTVDQ 107
++YKV + E EG +EV D+ IL A ++G+D+P+ C+ G C TC +LISGTVDQ
Sbjct: 1 ATYKVTLINEAEGLNKTIEVPDDQYILDAAEEAGIDLPYSCRAGACSTCAGKLISGTVDQ 60
Query: 108 SD-GMLSDDVVERGYALLCASYPRSDCHIRVIPEDEL 143
SD L DD +E GY L C +YP SDC I E+EL
Sbjct: 61 SDQSFLDDDQIEAGYVLTCVAYPTSDCVIETHKEEEL 97
>FER1_NOSMU (P00252) Ferredoxin I
Length = 98
Score = 94.0 bits (232), Expect = 1e-19
Identities = 45/94 (47%), Positives = 61/94 (64%), Gaps = 2/94 (2%)
Query: 52 YKV-VIEHEGKTTQLEVEPDETILSKALDSGLDVPHDCKLGVCMTCPARLISGTVDQSD- 109
YKV +++ EG T ++V DE IL A D GLD+P+ C+ G C TC +++SGTVDQSD
Sbjct: 4 YKVTLVDQEGTETTIDVPDDEYILDIAEDQGLDLPYSCRAGACSTCAGKIVSGTVDQSDQ 63
Query: 110 GMLSDDVVERGYALLCASYPRSDCHIRVIPEDEL 143
L DD +E+GY L C +YP SD I E++L
Sbjct: 64 SFLDDDQIEKGYVLTCVAYPTSDLKIETHKEEDL 97
>FER_SYNEL (P00256) Ferredoxin I
Length = 97
Score = 91.7 bits (226), Expect = 6e-19
Identities = 44/96 (45%), Positives = 61/96 (62%), Gaps = 2/96 (2%)
Query: 50 SSYKV-VIEHEGKTTQLEVEPDETILSKALDSGLDVPHDCKLGVCMTCPARLISGTVDQS 108
++YKV ++ +G T ++V DE IL A + GLD+P C+ G C TC +L+ G VDQS
Sbjct: 1 ATYKVTLVRPDGSETTIDVPEDEYILDVAEEQGLDLPFSCRAGACSTCAGKLLEGEVDQS 60
Query: 109 D-GMLSDDVVERGYALLCASYPRSDCHIRVIPEDEL 143
D L DD +E+G+ L C +YPRSDC I E+EL
Sbjct: 61 DQSFLDDDQIEKGFVLTCVAYPRSDCKILTNQEEEL 96
>FER_CHLFR (P00247) Ferredoxin
Length = 98
Score = 91.3 bits (225), Expect = 8e-19
Identities = 45/97 (46%), Positives = 61/97 (62%), Gaps = 3/97 (3%)
Query: 50 SSYKVVI--EHEGKTTQLEVEPDETILSKALDSGLDVPHDCKLGVCMTCPARLISGTVDQ 107
++YKV + + EG +EV+ D IL A ++GLD+P+ C+ G C TC ++ SGTVDQ
Sbjct: 1 ATYKVTLINDAEGLNQTIEVDDDTYILDAAEEAGLDLPYSCRAGACSTCAGKIKSGTVDQ 60
Query: 108 SD-GMLSDDVVERGYALLCASYPRSDCHIRVIPEDEL 143
SD L DD +E GY L C +YP SDC I E+EL
Sbjct: 61 SDQSFLDDDQIEAGYVLTCVAYPTSDCTIETHKEEEL 97
>FER_SYNLI (P00255) Ferredoxin
Length = 96
Score = 90.9 bits (224), Expect = 1e-18
Identities = 43/95 (45%), Positives = 58/95 (60%), Gaps = 1/95 (1%)
Query: 50 SSYKVVIEHEGKTTQLEVEPDETILSKALDSGLDVPHDCKLGVCMTCPARLISGTVDQSD 109
++YKV + T ++V DE IL A + GLD+P C+ G C TC +L+ G VDQSD
Sbjct: 1 ATYKVTLVRPDGETTIDVPEDEYILDVAEEQGLDLPFSCRAGACSTCAGKLLEGEVDQSD 60
Query: 110 -GMLSDDVVERGYALLCASYPRSDCHIRVIPEDEL 143
L DD +E+G+ L C +YPRSDC I E+EL
Sbjct: 61 QSFLDDDQIEKGFVLTCVAYPRSDCKILTHQEEEL 95
>FER1_PLEBO (Q51577) Ferredoxin I (FdI)
Length = 99
Score = 90.5 bits (223), Expect = 1e-18
Identities = 44/96 (45%), Positives = 60/96 (61%), Gaps = 3/96 (3%)
Query: 51 SYKVVI--EHEGKTTQLEVEPDETILSKALDSGLDVPHDCKLGVCMTCPARLISGTVDQS 108
S+KV + E EG T +EV DE IL A + G+D+P+ C+ G C TC ++ +GTVDQS
Sbjct: 3 SFKVTLINETEGLNTTIEVPDDEYILDAAEEQGIDLPYSCRAGACSTCAGKITAGTVDQS 62
Query: 109 D-GMLSDDVVERGYALLCASYPRSDCHIRVIPEDEL 143
D L DD ++ GY L C +YP SDC I E++L
Sbjct: 63 DQSFLDDDQIQAGYVLTCVAYPTSDCTILTHQEEDL 98
>FER1_APHFL (P00244) Ferredoxin I
Length = 97
Score = 90.1 bits (222), Expect = 2e-18
Identities = 44/96 (45%), Positives = 62/96 (63%), Gaps = 2/96 (2%)
Query: 50 SSYKV-VIEHEGKTTQLEVEPDETILSKALDSGLDVPHDCKLGVCMTCPARLISGTVDQS 108
++YKV +I+ EG TT ++ D IL A ++GLD+P+ C+ G C TC +L++GT+DQS
Sbjct: 1 ATYKVTLIDAEGTTTTIDCPDDTYILDAAEEAGLDLPYSCRAGACSTCAGKLVTGTIDQS 60
Query: 109 D-GMLSDDVVERGYALLCASYPRSDCHIRVIPEDEL 143
D L DD VE GY L C +YP SD I E++L
Sbjct: 61 DQSFLDDDQVEAGYVLTCVAYPTSDVTIETHKEEDL 96
>FER2_SYNP6 (P08451) Ferredoxin II
Length = 104
Score = 88.2 bits (217), Expect = 6e-18
Identities = 40/99 (40%), Positives = 64/99 (64%), Gaps = 1/99 (1%)
Query: 50 SSYKVVIEHEGKTTQLEVEPDETILSKALDSGLDVPHDCKLGVCMTCPARLISGTVDQSD 109
++Y+V + ++G++ + D+++L A +G+D+P C GVC TC AR++SG VDQ D
Sbjct: 1 ATYQVEVIYQGQSQTFTADSDQSVLDSAQAAGVDLPASCLTGVCTTCAARILSGEVDQPD 60
Query: 110 GM-LSDDVVERGYALLCASYPRSDCHIRVIPEDELLSMQ 147
M + + ++GY LLC +YPRSD I EDEL ++Q
Sbjct: 61 AMGVGPEPAKQGYTLLCVAYPRSDLKIETHKEDELYALQ 99
>FER2_RAPSA (P14937) Ferredoxin, root R-B2
Length = 98
Score = 87.8 bits (216), Expect = 8e-18
Identities = 42/94 (44%), Positives = 61/94 (64%), Gaps = 2/94 (2%)
Query: 52 YKV-VIEHEGKTTQLEVEPDETILSKALDSGLDVPHDCKLGVCMTCPARLISGTVDQSDG 110
YKV +I EG+ + EV+ D+ IL A ++G+D+P+ C+ G C TC +++ G VDQS+G
Sbjct: 4 YKVKLIGPEGEENEFEVQDDQFILDAAEEAGVDLPYSCRAGACSTCAGQIVKGQVDQSEG 63
Query: 111 -MLSDDVVERGYALLCASYPRSDCHIRVIPEDEL 143
L DD E+G+ L C +YP+SDC I E EL
Sbjct: 64 SFLEDDHFEKGFVLTCVAYPQSDCVIHTHKETEL 97
>FER_NOSMU (P00253) Ferredoxin
Length = 98
Score = 87.4 bits (215), Expect = 1e-17
Identities = 44/97 (45%), Positives = 60/97 (61%), Gaps = 3/97 (3%)
Query: 50 SSYKVVI--EHEGKTTQLEVEPDETILSKALDSGLDVPHDCKLGVCMTCPARLISGTVDQ 107
+++KV + E EG ++EV DE IL A + G D+P C+ G C TC +L+SGTVDQ
Sbjct: 1 ATFKVTLINEAEGTKHEIEVPDDEYILDAAEEEGYDLPFSCRAGACSTCAGKLVSGTVDQ 60
Query: 108 SD-GMLSDDVVERGYALLCASYPRSDCHIRVIPEDEL 143
SD L DD +E GY L C +YP SD I+ E++L
Sbjct: 61 SDQSFLDDDQIEAGYVLTCVAYPTSDVVIQTHKEEDL 97
>FER1_ANASP (P06543) Ferredoxin I
Length = 98
Score = 87.4 bits (215), Expect = 1e-17
Identities = 44/97 (45%), Positives = 60/97 (61%), Gaps = 3/97 (3%)
Query: 50 SSYKVVI--EHEGKTTQLEVEPDETILSKALDSGLDVPHDCKLGVCMTCPARLISGTVDQ 107
+++KV + E EG ++EV DE IL A + G D+P C+ G C TC +L+SGTVDQ
Sbjct: 1 ATFKVTLINEAEGTKHEIEVPDDEYILDAAEEQGYDLPFSCRAGACSTCAGKLVSGTVDQ 60
Query: 108 SD-GMLSDDVVERGYALLCASYPRSDCHIRVIPEDEL 143
SD L DD +E GY L C +YP SD I+ E++L
Sbjct: 61 SDQSFLDDDQIEAGYVLTCVAYPTSDVVIQTHKEEDL 97
>FER1_ANAVA (P00254) Ferredoxin I
Length = 98
Score = 87.0 bits (214), Expect = 1e-17
Identities = 43/97 (44%), Positives = 60/97 (61%), Gaps = 3/97 (3%)
Query: 50 SSYKVVI--EHEGKTTQLEVEPDETILSKALDSGLDVPHDCKLGVCMTCPARLISGTVDQ 107
+++KV + E EG + ++V DE IL A + G D+P C+ G C TC +L+SGTVDQ
Sbjct: 1 ATFKVTLINEAEGTSNTIDVPDDEYILDAAEEQGYDLPFSCRAGACSTCAGKLVSGTVDQ 60
Query: 108 SD-GMLSDDVVERGYALLCASYPRSDCHIRVIPEDEL 143
SD L DD +E GY L C +YP SD I+ E++L
Sbjct: 61 SDQSFLDDDQIEAGYVLTCVAYPTSDVTIQTHKEEDL 97
>FER_SPIPL (P00246) Ferredoxin
Length = 98
Score = 86.3 bits (212), Expect = 2e-17
Identities = 42/97 (43%), Positives = 59/97 (60%), Gaps = 3/97 (3%)
Query: 50 SSYKVVI--EHEGKTTQLEVEPDETILSKALDSGLDVPHDCKLGVCMTCPARLISGTVDQ 107
++YKV + E EG ++ + D IL A ++GLD+P+ C+ G C TC + SGT+DQ
Sbjct: 1 ATYKVTLINEAEGINETIDCDDDTYILDAAEEAGLDLPYSCRAGACSTCAGTITSGTIDQ 60
Query: 108 SD-GMLSDDVVERGYALLCASYPRSDCHIRVIPEDEL 143
SD L DD +E GY L C +YP SDC I+ E+ L
Sbjct: 61 SDQSFLDDDQIEAGYVLTCVAYPTSDCTIKTHQEEGL 97
>FER_SYNP4 (P15788) Ferredoxin
Length = 98
Score = 85.9 bits (211), Expect = 3e-17
Identities = 43/97 (44%), Positives = 58/97 (59%), Gaps = 3/97 (3%)
Query: 50 SSYKVVIEHE--GKTTQLEVEPDETILSKALDSGLDVPHDCKLGVCMTCPARLISGTVDQ 107
+SYKV + +E G +EV DE IL A + G+D+P+ C+ G C TC ++ G +DQ
Sbjct: 1 ASYKVTLINEEMGLNETIEVPDDEYILDVAEEEGIDLPYSCRAGACSTCAGKIKEGEIDQ 60
Query: 108 SD-GMLSDDVVERGYALLCASYPRSDCHIRVIPEDEL 143
SD L DD +E GY L C +YP SDC I E+EL
Sbjct: 61 SDQSFLDDDQIEAGYVLTCVAYPASDCTIITHQEEEL 97
>FER_SPIMA (P00245) Ferredoxin
Length = 98
Score = 85.5 bits (210), Expect = 4e-17
Identities = 41/97 (42%), Positives = 60/97 (61%), Gaps = 3/97 (3%)
Query: 50 SSYKVVI--EHEGKTTQLEVEPDETILSKALDSGLDVPHDCKLGVCMTCPARLISGTVDQ 107
++YKV + E EG ++ + D IL A ++GLD+P+ C+ G C TC ++ SG++DQ
Sbjct: 1 ATYKVTLISEAEGINETIDCDDDTYILDAAEEAGLDLPYSCRAGACSTCAGKITSGSIDQ 60
Query: 108 SD-GMLSDDVVERGYALLCASYPRSDCHIRVIPEDEL 143
SD L DD +E GY L C +YP SDC I+ E+ L
Sbjct: 61 SDQSFLDDDQIEAGYVLTCVAYPTSDCTIQTHQEEGL 97
>FER1_CYAPA (P17007) Ferredoxin I
Length = 98
Score = 84.3 bits (207), Expect = 9e-17
Identities = 37/92 (40%), Positives = 55/92 (59%), Gaps = 1/92 (1%)
Query: 53 KVVIEHEGKTTQLEVEPDETILSKALDSGLDVPHDCKLGVCMTCPARLISGTVDQSDGML 112
+++ E +G T +E DE IL A + G+D+P+ C+ G C TC +++ GTVDQSD
Sbjct: 6 RLICEEQGLDTTIECPDDEYILDAAEEQGIDLPYSCRAGACSTCAGKVVEGTVDQSDQSF 65
Query: 113 SDDV-VERGYALLCASYPRSDCHIRVIPEDEL 143
DD + GY L C +YP SDC ++ E+ L
Sbjct: 66 LDDAQLAAGYVLTCVAYPSSDCTVKTHQEESL 97
>FER_HORVU (P83522) Ferredoxin
Length = 97
Score = 82.8 bits (203), Expect = 3e-16
Identities = 40/95 (42%), Positives = 59/95 (62%), Gaps = 1/95 (1%)
Query: 50 SSYKVVIEHEGKTTQLEVEPDETILSKALDSGLDVPHDCKLGVCMTCPARLISGTVDQSD 109
++YKV + +LEV D IL +A + G+D+P+ C+ G C +C +L+SG +DQSD
Sbjct: 1 ATYKVKLVTPEGEVELEVPDDVYILDQAEEEGIDLPYSCRAGSCSSCAGKLVSGEIDQSD 60
Query: 110 -GMLSDDVVERGYALLCASYPRSDCHIRVIPEDEL 143
L DD +E G+ L CA+YP+SD I E+EL
Sbjct: 61 QSFLDDDQMEEGWVLTCAAYPKSDVVIETHKEEEL 95
>FER1_SYNP7 (P06517) Ferredoxin I
Length = 98
Score = 82.8 bits (203), Expect = 3e-16
Identities = 40/97 (41%), Positives = 59/97 (60%), Gaps = 3/97 (3%)
Query: 50 SSYKVVIEH--EGKTTQLEVEPDETILSKALDSGLDVPHDCKLGVCMTCPARLISGTVDQ 107
++YKV + + EG T ++V D IL A + G+D+P+ C+ G C TC +++SGTVDQ
Sbjct: 1 ATYKVTLVNAAEGLNTTIDVADDTYILDAAEEQGIDLPYSCRAGACSTCAGKVVSGTVDQ 60
Query: 108 SD-GMLSDDVVERGYALLCASYPRSDCHIRVIPEDEL 143
SD L DD + G+ L C +YP SD I E++L
Sbjct: 61 SDQSFLDDDQIAAGFVLTCVAYPTSDVTIETHKEEDL 97
>FER1_CYACA (Q9TLW0) Ferredoxin
Length = 98
Score = 82.8 bits (203), Expect = 3e-16
Identities = 41/97 (42%), Positives = 59/97 (60%), Gaps = 3/97 (3%)
Query: 50 SSYKVVI--EHEGKTTQLEVEPDETILSKALDSGLDVPHDCKLGVCMTCPARLISGTVDQ 107
+SYKV + E EG ++ D+ IL A + G+D+P+ C+ G C TC +LISGTVDQ
Sbjct: 1 TSYKVKLTNEKEGIDVEINCPNDQYILDAAEEQGIDLPYSCRAGACSTCAGKLISGTVDQ 60
Query: 108 SD-GMLSDDVVERGYALLCASYPRSDCHIRVIPEDEL 143
SD L D+ ++ G+ L C +YP S+C I E+ L
Sbjct: 61 SDQSFLDDEQIKEGFVLTCVAYPTSNCTILTHQEEAL 97
>FER_SYNY3 (P27320) Ferredoxin I
Length = 96
Score = 82.4 bits (202), Expect = 3e-16
Identities = 39/95 (41%), Positives = 56/95 (58%), Gaps = 1/95 (1%)
Query: 50 SSYKVVIEHEGKTTQLEVEPDETILSKALDSGLDVPHDCKLGVCMTCPARLISGTVDQSD 109
+SY V + + +E D IL A ++GLD+P+ C+ G C TC ++ +G+VDQSD
Sbjct: 1 ASYTVKLITPDGESSIECSDDTYILDAAEEAGLDLPYSCRAGACSTCAGKITAGSVDQSD 60
Query: 110 -GMLSDDVVERGYALLCASYPRSDCHIRVIPEDEL 143
L DD +E GY L C +YP SDC I E++L
Sbjct: 61 QSFLDDDQIEAGYVLTCVAYPTSDCTIETHKEEDL 95
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.317 0.133 0.392
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,856,346
Number of Sequences: 164201
Number of extensions: 713073
Number of successful extensions: 1982
Number of sequences better than 10.0: 157
Number of HSP's better than 10.0 without gapping: 134
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 1741
Number of HSP's gapped (non-prelim): 158
length of query: 153
length of database: 59,974,054
effective HSP length: 101
effective length of query: 52
effective length of database: 43,389,753
effective search space: 2256267156
effective search space used: 2256267156
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)
Medicago: description of AC135320.16