Medicago
BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC135319.9 + phase: 0 /pseudo
         (734 letters)

Database: sprot 
           164,201 sequences; 59,974,054 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

FTSZ_AQUAE (O66809) Cell division protein ftsZ                         32  7.8

>FTSZ_AQUAE (O66809) Cell division protein ftsZ
          Length = 367

 Score = 31.6 bits (70), Expect = 7.8
 Identities = 15/50 (30%), Positives = 24/50 (48%)

Query: 678 EKLHSLCNPITENYFGGIT*QAEADLLYSLITKAKFENNRYQKPKKKTKF 727
           E++HS  +P  E  FG +    E D +   I    F   ++Q  +K+ KF
Sbjct: 277 ERIHSKVHPEAEIIFGAVLEPQEQDFIRVAIVATDFPEEKFQVGEKEVKF 326


  Database: sprot
    Posted date:  Nov 25, 2004 10:54 AM
  Number of letters in database: 59,974,054
  Number of sequences in database:  164,201
  
Lambda     K      H
   0.365    0.163    0.692 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 76,671,105
Number of Sequences: 164201
Number of extensions: 2929994
Number of successful extensions: 13100
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 13099
Number of HSP's gapped (non-prelim): 1
length of query: 734
length of database: 59,974,054
effective HSP length: 118
effective length of query: 616
effective length of database: 40,598,336
effective search space: 25008574976
effective search space used: 25008574976
T: 11
A: 40
X1: 14 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 36 (21.6 bits)
S2: 70 (31.6 bits)


Medicago: description of AC135319.9