BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC135315.2 - phase: 0
(478 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
OFD1_HUMAN (O75665) Oral-facial-digital syndrome 1 protein (Prot... 36 0.19
YN37_YEAST (P48563) Hypothetical 186.8 kDa protein in CLA4-PUS4 ... 34 0.73
YAJ8_SCHPO (Q09908) Hypothetical protein C30D11.08c in chromosome I 33 1.6
RLP7_KLULA (P32102) Ribosome biogenesis protein RLP7 33 1.6
PFDB_PYRAB (Q9UYJ4) Prefoldin beta subunit (GimC beta subunit) 33 2.1
PAR4_MOUSE (O88634) Proteinase activated receptor 4 precursor (P... 33 2.1
ATRX_CAEEL (Q9U7E0) Transcriptional regulator ATRX homolog (X-li... 33 2.1
PRX1_CHICK (Q91018) Homeobox prospero-like protein PROX1 (PROX 1) 32 2.8
IF2_AQUAE (O67825) Translation initiation factor IF-2 32 2.8
RX2_BRARE (O42357) Retinal homeobox protein Rx2 32 3.6
PFDB_PYRHO (O58268) Prefoldin beta subunit (GimC beta subunit) 32 3.6
PFDB_PYRFU (Q8U3S3) Prefoldin beta subunit (GimC beta subunit) 32 3.6
C5P2_MACFA (Q9BE52) CDK5 regulatory subunit associated protein 2... 32 3.6
C5P2_HUMAN (Q96SN8) CDK5 regulatory subunit associated protein 2... 32 3.6
YO61_CAEEL (P34600) Hypothetical protein ZK1098.1 in chromosome III 32 4.7
YA42_MYCPN (P75072) Hypothetical protein MPN042 (B01_orf672) 32 4.7
HOK1_MOUSE (Q8BIL5) Hook homolog 1 32 4.7
HOK1_HUMAN (Q9UJC3) Hook homolog 1 (h-hook1) (hHK1) 32 4.7
SNCP_HUMAN (Q9Y6H5) Synphilin 1 (Alpha-synuclein interacting pro... 31 6.1
INO1_ORYSA (O64437) Inositol-3-phosphate synthase (EC 5.5.1.4) (... 31 6.1
>OFD1_HUMAN (O75665) Oral-facial-digital syndrome 1 protein (Protein
71-7A)
Length = 1012
Score = 36.2 bits (82), Expect = 0.19
Identities = 39/140 (27%), Positives = 64/140 (44%), Gaps = 18/140 (12%)
Query: 350 RAEEIGMPYPA--MRHVAASAPSIPLPL--PPTTQEMYQEHLAMESRKKQMWKARYNEAE 405
R E+G PA M HV A+A ++PL P Q+ +E E ++Q K R E
Sbjct: 836 RQLEMGGLSPAGDMSHVDAAAAAVPLSYQHPSVDQKQIEEQKEEEKIREQQVKERRQREE 895
Query: 406 ----NLIMTLDGKD---EQKTHENLMLKKEL-VKVRRELEEKDELLMRD------SKRAR 451
NL L+ + E+ E M+++ L +K+++ELE ++EL M + S +
Sbjct: 896 RRQSNLQEVLERERRELEKLYQERKMIEESLKIKIKKELEMENELEMSNQEIKDKSAHSE 955
Query: 452 GRRNFYARYCGSDSESESED 471
Y + + + ES D
Sbjct: 956 NPLEKYMKIIQQEQDQESAD 975
>YN37_YEAST (P48563) Hypothetical 186.8 kDa protein in CLA4-PUS4
intergenic region
Length = 1636
Score = 34.3 bits (77), Expect = 0.73
Identities = 24/88 (27%), Positives = 44/88 (49%), Gaps = 2/88 (2%)
Query: 103 VIAKDLYLKTSDVSKHLITKSHIRGFTSKYLLVQANLETTCQDALEAILALLIYGLILFP 162
V A L L+ S+H T +R LL++ + + LE IL+LLI+G+ +
Sbjct: 269 VKAIPLLLRCISSSRHFSTA--VRSCRCLKLLIRKEYLSILELELEVILSLLIHGISVES 326
Query: 163 NLDNFVDMNAIEIFHSRNPVPTLLANMY 190
NL + + ++E+F + P ++ +Y
Sbjct: 327 NLSGWQRVLSLELFKDLSQDPEIVNTLY 354
>YAJ8_SCHPO (Q09908) Hypothetical protein C30D11.08c in chromosome I
Length = 538
Score = 33.1 bits (74), Expect = 1.6
Identities = 30/98 (30%), Positives = 44/98 (44%), Gaps = 16/98 (16%)
Query: 365 AASAPSIPL---PLPPTTQEMYQEHLAMESRKKQMWKA-----RYNEAENLIMTLDGKDE 416
+A P++P PLPP + +AM +K+ W A R N A+ L T DG++E
Sbjct: 137 SALPPNVPASSSPLPPMS-------IAMNIARKRSWPASLAIERDNTADALFSTEDGREE 189
Query: 417 QKTHENLMLKKELVKVRRELEEKDELLMRDSKRARGRR 454
Q E + K KV R + + +R GRR
Sbjct: 190 QFNLEGVKTKSGR-KVHRPNHFDPLVKLPTRRRGPGRR 226
>RLP7_KLULA (P32102) Ribosome biogenesis protein RLP7
Length = 318
Score = 33.1 bits (74), Expect = 1.6
Identities = 22/96 (22%), Positives = 43/96 (43%), Gaps = 4/96 (4%)
Query: 380 QEMYQEHLAMESRKKQMWKARYNEAENLIMTLDGKDEQKTHENLMLKKELVKVRREL--- 436
QE+ ++ E ++K+ K R+ AE ++ T + +KT + E KV+ +L
Sbjct: 27 QELAKKRKEQEEKQKRSKKNRFVRAETIVATTLATEREKTRIRRVRDLENQKVKNDLSHI 86
Query: 437 -EEKDELLMRDSKRARGRRNFYARYCGSDSESESED 471
++D +L + A + + D E E +D
Sbjct: 87 PSDRDFILRISEREAGSKATSESELQDVDEEDEEDD 122
>PFDB_PYRAB (Q9UYJ4) Prefoldin beta subunit (GimC beta subunit)
Length = 117
Score = 32.7 bits (73), Expect = 2.1
Identities = 25/79 (31%), Positives = 38/79 (47%), Gaps = 10/79 (12%)
Query: 375 LPPTTQEM------YQEHLAMESRKKQMWKARYNEAENLIMTL----DGKDEQKTHENLM 424
+PP Q M YQ+ L + ++KQ +A NEA+ + + D KT L+
Sbjct: 4 IPPQVQAMLGQLESYQQQLQLVIQQKQKVQADLNEAKKALEEIEALPDDAQVYKTVGTLI 63
Query: 425 LKKELVKVRRELEEKDELL 443
+K K +EL+EK E L
Sbjct: 64 VKTTKEKALQELKEKVETL 82
>PAR4_MOUSE (O88634) Proteinase activated receptor 4 precursor
(PAR-4) (Thrombin receptor-like 3) (Coagulation factor
II receptor-like 3)
Length = 396
Score = 32.7 bits (73), Expect = 2.1
Identities = 20/67 (29%), Positives = 33/67 (48%), Gaps = 2/67 (2%)
Query: 152 ALLIYGLILFPNLDNFVDMNAIEIFHSRNPVPTLLANMYHAIHDRTLKGRGYILCCVPLL 211
AL + L+LF + +F N + + H NP P N+Y A + +L C P +
Sbjct: 293 ALRLTALVLFSAVASFTPSNVLLVLHYSNPSPEAWGNLYGA-YVPSLALSTLNSCVDPFI 351
Query: 212 YRWFISH 218
Y +++SH
Sbjct: 352 Y-YYVSH 357
>ATRX_CAEEL (Q9U7E0) Transcriptional regulator ATRX homolog
(X-linked nuclear protein-1)
Length = 1359
Score = 32.7 bits (73), Expect = 2.1
Identities = 23/87 (26%), Positives = 44/87 (50%), Gaps = 6/87 (6%)
Query: 385 EHLAMESRKKQMWKARYNEAENLIMTLDGKDEQKTHENLMLKKELVKVRRELEEKDELLM 444
E +S+KK + +E+ + + ++E+K ++ K++ VK R E E+ +
Sbjct: 134 EEREQKSKKKSKKTKKQTSSES---SEESEEERKVKKSKKNKEKSVKKRAETSEESD--- 187
Query: 445 RDSKRARGRRNFYARYCGSDSESESED 471
D K ++ + + S+SESESED
Sbjct: 188 EDEKPSKKSKKGLKKKAKSESESESED 214
>PRX1_CHICK (Q91018) Homeobox prospero-like protein PROX1 (PROX 1)
Length = 736
Score = 32.3 bits (72), Expect = 2.8
Identities = 19/81 (23%), Positives = 40/81 (48%), Gaps = 15/81 (18%)
Query: 390 ESRKKQMWKARYNEAENLIMTLDGKDEQKTHENLMLKKELVKVRRELEEKDELLMRDSKR 449
E+++KQ W + ++ +++ + EQK E LK++L ++++L + E
Sbjct: 206 ENKRKQNWPQQQQQSFQQLVS--ARKEQKREERRQLKQQLEDMQKQLRQLQE-------- 255
Query: 450 ARGRRNFYARYCGSDSESESE 470
FY Y +DSE++ +
Sbjct: 256 -----EFYQIYDSTDSENDED 271
>IF2_AQUAE (O67825) Translation initiation factor IF-2
Length = 805
Score = 32.3 bits (72), Expect = 2.8
Identities = 17/73 (23%), Positives = 37/73 (50%)
Query: 378 TTQEMYQEHLAMESRKKQMWKARYNEAENLIMTLDGKDEQKTHENLMLKKELVKVRRELE 437
+ +E+ +E L + ++K+ K E + ++ K E++ E KKE K + ++
Sbjct: 127 SVEELIKEILEKKEKEKEKKKVEKERKEEKVRVVEVKKEERKEEKKEEKKEEEKPKIKMS 186
Query: 438 EKDELLMRDSKRA 450
+K+ +MR + A
Sbjct: 187 KKEREIMRKLEHA 199
>RX2_BRARE (O42357) Retinal homeobox protein Rx2
Length = 327
Score = 32.0 bits (71), Expect = 3.6
Identities = 33/113 (29%), Positives = 48/113 (42%), Gaps = 15/113 (13%)
Query: 13 DLVSLRELALKVKNQTGFRLRYGGLLTILRTNVEEKLVHTLVQFYDPSFRCFTFPDFQLV 72
D+ S ELA+KV N R++ + +EK+ ++ +D R F P +
Sbjct: 161 DVYSREELAMKV-NLPEVRVQVWFQNRRAKWRRQEKMDTGTMKLHDSPIRSFNRPP--MA 217
Query: 73 PTLEAYSYLL------GSPIAEKTP------FTGPGASLTPLVIAKDLYLKTS 113
P + S L SP++ TP F GPG SL P A +L TS
Sbjct: 218 PNVGPMSNSLPLDPWLSSPLSSATPMHSIPGFMGPGQSLQPTYTAHPGFLNTS 270
>PFDB_PYRHO (O58268) Prefoldin beta subunit (GimC beta subunit)
Length = 117
Score = 32.0 bits (71), Expect = 3.6
Identities = 25/79 (31%), Positives = 38/79 (47%), Gaps = 10/79 (12%)
Query: 375 LPPTTQEM------YQEHLAMESRKKQMWKARYNEAENLIMTL----DGKDEQKTHENLM 424
+PP Q M YQ+ L + ++KQ +A NEA+ + + D KT L+
Sbjct: 4 IPPQVQAMLGQLDTYQQQLQLVIQQKQKVQADLNEAKKALEEIETLPDDAQIYKTVGTLI 63
Query: 425 LKKELVKVRRELEEKDELL 443
+K K +EL+EK E L
Sbjct: 64 VKTTKEKAVQELKEKIETL 82
>PFDB_PYRFU (Q8U3S3) Prefoldin beta subunit (GimC beta subunit)
Length = 117
Score = 32.0 bits (71), Expect = 3.6
Identities = 24/79 (30%), Positives = 39/79 (48%), Gaps = 10/79 (12%)
Query: 375 LPPTTQEM------YQEHLAMESRKKQMWKARYNEAENLIMTLDGKDEQ----KTHENLM 424
+PP Q M YQ+ L + ++KQ +A NEA+ + ++ + KT L+
Sbjct: 4 IPPQVQAMLGQLESYQQQLQLVIQQKQKVQADLNEAKKALEEIEKLTDDAVIYKTVGTLI 63
Query: 425 LKKELVKVRRELEEKDELL 443
+K K +EL+EK E L
Sbjct: 64 VKTTKEKALQELKEKVETL 82
>C5P2_MACFA (Q9BE52) CDK5 regulatory subunit associated protein 2
(CDK5 activator-binding protein C48) (QflA-15432)
Length = 862
Score = 32.0 bits (71), Expect = 3.6
Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 4/67 (5%)
Query: 405 ENLIMTLDGKDEQKTHENLMLKKELVKVRRELEEKDELLMRDSKRARGRRNFYARYCGSD 464
E + G E N+ LK E+ ++REL+E++ LL+R SK A GS+
Sbjct: 86 ERMQQEFHGPAEHIYKTNIELKVEVESLKRELQERERLLIRASKAVES----LAEAGGSE 141
Query: 465 SESESED 471
+ ED
Sbjct: 142 IQRVKED 148
>C5P2_HUMAN (Q96SN8) CDK5 regulatory subunit associated protein 2
(CDK5 activator-binding protein C48)
Length = 1893
Score = 32.0 bits (71), Expect = 3.6
Identities = 20/67 (29%), Positives = 33/67 (48%), Gaps = 4/67 (5%)
Query: 405 ENLIMTLDGKDEQKTHENLMLKKELVKVRRELEEKDELLMRDSKRARGRRNFYARYCGSD 464
E + G E N+ LK E+ ++REL+E+++LL++ SK A GS+
Sbjct: 86 ERMQQEFHGPTEHIYKTNIELKVEVESLKRELQEREQLLIKASKAVES----LAEAGGSE 141
Query: 465 SESESED 471
+ ED
Sbjct: 142 IQRVKED 148
>YO61_CAEEL (P34600) Hypothetical protein ZK1098.1 in chromosome III
Length = 724
Score = 31.6 bits (70), Expect = 4.7
Identities = 25/106 (23%), Positives = 50/106 (46%), Gaps = 17/106 (16%)
Query: 360 AMRHVAASAPSIPLPLPPTTQEMYQEHLAMESRK----KQMWKARYNEA--------ENL 407
AM+ AS P++PLP +E + + ++ R+ +++ + +YN+ +
Sbjct: 194 AMKATLASMPNVPLPSEKKEEESVNDEVELKKRQSERFRELLRDKYNDGKITTNCNWDQA 253
Query: 408 IMTLDGKDEQKTHENLMLKKELV---KVRRELEEKDE--LLMRDSK 448
+ + + + KK+L KV+R EE+DE L ++ SK
Sbjct: 254 VKWIQNDPRFRILNKVSEKKQLFNAWKVQRGKEERDEKRLAIKKSK 299
>YA42_MYCPN (P75072) Hypothetical protein MPN042 (B01_orf672)
Length = 672
Score = 31.6 bits (70), Expect = 4.7
Identities = 24/83 (28%), Positives = 42/83 (49%), Gaps = 10/83 (12%)
Query: 373 LPLPPTTQEMYQEHLAMESRKKQMWKARYNEAENLIMTLDGKDEQKTHENLMLKKELVKV 432
L LP E Q+++ KKQ KA + EAE + K+E++ H+ + +E ++
Sbjct: 302 LELPRLEAEFQQKYVDPLIEKKQRQKAEWEEAERI-----RKEEEEKHQKEL--EEQQRI 354
Query: 433 RRELEEKDELLMR---DSKRARG 452
+ E + DE L + + K+A G
Sbjct: 355 QAEKAKNDEQLQKPQTELKKALG 377
>HOK1_MOUSE (Q8BIL5) Hook homolog 1
Length = 728
Score = 31.6 bits (70), Expect = 4.7
Identities = 20/63 (31%), Positives = 33/63 (51%), Gaps = 4/63 (6%)
Query: 375 LPPTTQEMYQEHLAMESRKKQMWKARYNEAENLIMTLDGKDEQKTHENLMLKKELVKVRR 434
L Q+ ++ AME R +K +A N+I TLD K + E ++L+K+L + R
Sbjct: 588 LEAALQKKDEDMKAMEER----YKMYLEKARNVIKTLDPKLNPASAEIMLLRKQLAEKER 643
Query: 435 ELE 437
+E
Sbjct: 644 RIE 646
>HOK1_HUMAN (Q9UJC3) Hook homolog 1 (h-hook1) (hHK1)
Length = 728
Score = 31.6 bits (70), Expect = 4.7
Identities = 20/63 (31%), Positives = 33/63 (51%), Gaps = 4/63 (6%)
Query: 375 LPPTTQEMYQEHLAMESRKKQMWKARYNEAENLIMTLDGKDEQKTHENLMLKKELVKVRR 434
L Q+ ++ AME R +K +A N+I TLD K + E ++L+K+L + R
Sbjct: 588 LEAALQKKDEDMKAMEER----YKMYLEKARNVIKTLDPKLNPASAEIMLLRKQLAEKER 643
Query: 435 ELE 437
+E
Sbjct: 644 RIE 646
>SNCP_HUMAN (Q9Y6H5) Synphilin 1 (Alpha-synuclein interacting
protein)
Length = 919
Score = 31.2 bits (69), Expect = 6.1
Identities = 25/103 (24%), Positives = 48/103 (46%), Gaps = 3/103 (2%)
Query: 377 PTTQEMYQEHLAMESRKKQMWKARYNEAENLIMTLDGKDEQK---THENLMLKKELVKVR 433
P QE Q ++ + + KA+ +++ ++ L GK+ + T E L L+ + +
Sbjct: 589 PGVQEGIQVLGSLSASSRARPKAKDEDSDKILRQLLGKEISENVCTQEKLSLEFQDAQAS 648
Query: 434 RELEEKDELLMRDSKRARGRRNFYARYCGSDSESESEDHPTTS 476
+K L R+ K AR R+ SD++S + + P T+
Sbjct: 649 SRNSKKIPLEKRELKLARLRQLMQRSLSESDTDSNNSEDPKTT 691
>INO1_ORYSA (O64437) Inositol-3-phosphate synthase (EC 5.5.1.4)
(Myo-inositol-1-phosphate synthase) (MI-1-P synthase)
(IPS)
Length = 510
Score = 31.2 bits (69), Expect = 6.1
Identities = 21/56 (37%), Positives = 31/56 (54%), Gaps = 4/56 (7%)
Query: 139 LETTCQDALEAILALLIYGLILFPNLDNFVDMNAI--EIFHSRNPVPTLLANMYHA 192
L TC+D+L A A +I L+L L + + A E FHS +PV T+L+ + A
Sbjct: 416 LHNTCEDSLLA--APIILDLVLLAELSTRIQLKAEGEEKFHSFHPVATILSYLTKA 469
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.320 0.136 0.405
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 58,736,125
Number of Sequences: 164201
Number of extensions: 2629364
Number of successful extensions: 7581
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 7564
Number of HSP's gapped (non-prelim): 39
length of query: 478
length of database: 59,974,054
effective HSP length: 114
effective length of query: 364
effective length of database: 41,255,140
effective search space: 15016870960
effective search space used: 15016870960
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 68 (30.8 bits)
Medicago: description of AC135315.2