BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC135234.5 - phase: 0 /pseudo
         (256 letters)

Database: sprot 
           164,201 sequences; 59,974,054 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

IHBA_HORSE (P55102) Inhibin beta A chain precursor (Activin beta...    39  0.016
IHBA_HUMAN (P08476) Inhibin beta A chain precursor (Activin beta...    34  0.30
SPOF_SCHPO (Q10411) Sporulation-specific protein 15                    32  2.0
HTPG_RICCN (P58478) Chaperone protein htpG (Heat shock protein h...    31  3.3
Y0G0_VIBCH (Q9KL96) Hypothetical response regulatory protein VCA...    30  7.4
STU2_YEAST (P46675) Suppressor of tubulin STU2                         30  7.4
AFT1_YEAST (P22149) Iron-regulated transcriptional repressor AFT1      30  7.4
AMI3_MYCTU (P63494) Putative amidase amiC (EC 3.5.1.4)                 29  9.7
AMI3_MYCBO (P63495) Putative amidase amiC (EC 3.5.1.4)                 29  9.7

>IHBA_HORSE (P55102) Inhibin beta A chain precursor (Activin beta-A
           chain)
          Length = 426

 Score = 38.5 bits (88), Expect = 0.016
 Identities = 34/140 (24%), Positives = 66/140 (46%), Gaps = 7/140 (5%)

Query: 41  PMQARIGKIVEPKR--VPIGVVCE-ARDTASFFTTNARWREREELLTWVRRQGVKAGFGV 97
           P+ + I ++++  +  + I + C+   +T +      + +++EE     ++ G +AG GV
Sbjct: 222 PVSSSIQRLLDQGKSSLDIRIACDQCHETGASLVLLGKKKKKEEEGEGKKKDGGEAGAGV 281

Query: 98  CIDKSVLKRPYLTTQSERSGIYKPPKTRKKPNLEGIGSMKCNCPFR-LKGFFDKDTNDWW 156
             +K    RP+L  Q+ +S  +  P  R++  LE  G +   C  +    F D   NDW 
Sbjct: 282 DEEKEQSHRPFLMLQARQSEDH--PHRRRRRGLECDGKVNICCKKQFFVSFKDIGWNDWI 339

Query: 157 LAILCGMHNHDLEEKLQGHL 176
           +A   G H +  E +   H+
Sbjct: 340 IA-PSGYHANYCEGECPSHI 358


>IHBA_HUMAN (P08476) Inhibin beta A chain precursor (Activin beta-A
           chain) (Erythroid differentiation protein) (EDF)
          Length = 426

 Score = 34.3 bits (77), Expect = 0.30
 Identities = 31/140 (22%), Positives = 65/140 (46%), Gaps = 7/140 (5%)

Query: 41  PMQARIGKIVEPKR--VPIGVVCE-ARDTASFFTTNARWREREELLTWVRRQGVKAGFGV 97
           P+ + I ++++  +  + + + CE  +++ +      + +++EE     ++ G + G G 
Sbjct: 222 PVSSSIQRLLDQGKSSLDVRIACEQCQESGASLVLLGKKKKKEEEGEGKKKGGGEGGAGA 281

Query: 98  CIDKSVLKRPYLTTQSERSGIYKPPKTRKKPNLEGIGSMKCNCPFR-LKGFFDKDTNDWW 156
             +K    RP+L  Q+ +S  +  P  R++  LE  G +   C  +    F D   NDW 
Sbjct: 282 DEEKEQSHRPFLMLQARQSEDH--PHRRRRRGLECDGKVNICCKKQFFVSFKDIGWNDWI 339

Query: 157 LAILCGMHNHDLEEKLQGHL 176
           +A   G H +  E +   H+
Sbjct: 340 IA-PSGYHANYCEGECPSHI 358


>SPOF_SCHPO (Q10411) Sporulation-specific protein 15
          Length = 1957

 Score = 31.6 bits (70), Expect = 2.0
 Identities = 18/59 (30%), Positives = 33/59 (55%), Gaps = 4/59 (6%)

Query: 163 MHNHDLEEKLQGHLIAGRLSAEEKKKVIDMTKSLTVPRNILTNLKENN---KESVTTIK 218
           +H  + E  ++   + G+L  EE K   D+ K LT  +  ++NLKE N    +++T++K
Sbjct: 918 LHTENEELHIRLDKLTGKLKIEESKSS-DLGKKLTARQEEISNLKEENMSQSQAITSVK 975


>HTPG_RICCN (P58478) Chaperone protein htpG (Heat shock protein
           htpG) (High temperature protein G)
          Length = 621

 Score = 30.8 bits (68), Expect = 3.3
 Identities = 29/134 (21%), Positives = 54/134 (39%), Gaps = 17/134 (12%)

Query: 97  VCIDKSVLKRPYLTT-------QSERSGIY-----KPPKTRKKPNLEGIGSMKCNCPFRL 144
           VCI +S L    ++        +  +S IY      P K    P +EG+ S K +     
Sbjct: 391 VCIFRSALHNKMISLDEYIANFKEGQSTIYYLSGDNPDKLLSSPQIEGLLSKKIDVLL-- 448

Query: 145 KGFFDKDTNDWWLAILCGMHNHDLEEKLQGHLIAGRLSAEEKKKVIDMTKSLTVPRNILT 204
              F    +D+W+ +      H ++   +  +   + +++ ++K  D TKS    + +  
Sbjct: 449 ---FTDTVDDFWVNVNSKYKEHAIKSATRSDIDVEQTTSQSEEKNTDSTKSNDEYKLLTD 505

Query: 205 NLKENNKESVTTIK 218
             KE   E V  +K
Sbjct: 506 YFKETLGELVKEVK 519


>Y0G0_VIBCH (Q9KL96) Hypothetical response regulatory protein
           VCA0850
          Length = 261

 Score = 29.6 bits (65), Expect = 7.4
 Identities = 18/70 (25%), Positives = 31/70 (43%)

Query: 187 KKVIDMTKSLTVPRNILTNLKENNKESVTTIKQVYNVRTRWCKGERGDMTELQFLISKLV 246
           +K+    +    P N L  L    ++   T+K  Y V  +  KGE   +  +  L+    
Sbjct: 119 EKLQQQLRRNVAPSNDLAQLMSQFEQLTRTVKPQYQVWLKASKGEEIHLIAVNELLYVKA 178

Query: 247 EHKYVYLHKM 256
           E KY+ L+K+
Sbjct: 179 EDKYLSLYKV 188


>STU2_YEAST (P46675) Suppressor of tubulin STU2
          Length = 888

 Score = 29.6 bits (65), Expect = 7.4
 Identities = 17/61 (27%), Positives = 32/61 (51%), Gaps = 5/61 (8%)

Query: 181 LSAEEKKKVIDMTKSLTVPRNILTNLKENNKESVTTIK----QVYNVRTRWCKGERGDMT 236
           ++A  K +V+  +KSL  P+N++ N  + N++ +   K    ++ N    W K ER  + 
Sbjct: 628 VAANNKSRVLLTSKSLATPKNVVANSTDKNEKLIEEYKYRLQKLQNDEMIWTK-ERQSLL 686

Query: 237 E 237
           E
Sbjct: 687 E 687


>AFT1_YEAST (P22149) Iron-regulated transcriptional repressor AFT1
          Length = 690

 Score = 29.6 bits (65), Expect = 7.4
 Identities = 12/43 (27%), Positives = 21/43 (47%)

Query: 127 KPNLEGIGSMKCNCPFRLKGFFDKDTNDWWLAILCGMHNHDLE 169
           KP  +   S   NCPFR++  +      W + ++   H+H L+
Sbjct: 202 KPKKKRCVSRFNNCPFRVRATYSLKRKRWSIVVMDNNHSHQLK 244


>AMI3_MYCTU (P63494) Putative amidase amiC (EC 3.5.1.4)
          Length = 473

 Score = 29.3 bits (64), Expect = 9.7
 Identities = 17/57 (29%), Positives = 30/57 (51%), Gaps = 13/57 (22%)

Query: 31  INLKPFKVQIPMQARIGKIVEPKRVPIGVVCE------ARDTASFFTTNAR-WRERE 80
           + LKP + ++P++       E +R+P+G+V         RDTA+F+    R WR  +
Sbjct: 192 VGLKPSRGRLPLEP------EYRRLPVGIVANGVLTRTVRDTAAFYREAERLWRNHQ 242


>AMI3_MYCBO (P63495) Putative amidase amiC (EC 3.5.1.4)
          Length = 473

 Score = 29.3 bits (64), Expect = 9.7
 Identities = 17/57 (29%), Positives = 30/57 (51%), Gaps = 13/57 (22%)

Query: 31  INLKPFKVQIPMQARIGKIVEPKRVPIGVVCE------ARDTASFFTTNAR-WRERE 80
           + LKP + ++P++       E +R+P+G+V         RDTA+F+    R WR  +
Sbjct: 192 VGLKPSRGRLPLEP------EYRRLPVGIVANGVLTRTVRDTAAFYREAERLWRNHQ 242


  Database: sprot
    Posted date:  Nov 25, 2004 10:54 AM
  Number of letters in database: 59,974,054
  Number of sequences in database:  164,201
  
Lambda     K      H
   0.318    0.136    0.410 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31,026,460
Number of Sequences: 164201
Number of extensions: 1298043
Number of successful extensions: 3173
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 3170
Number of HSP's gapped (non-prelim): 10
length of query: 256
length of database: 59,974,054
effective HSP length: 108
effective length of query: 148
effective length of database: 42,240,346
effective search space: 6251571208
effective search space used: 6251571208
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)