
BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC135231.7 + phase: 0 /pseudo
(943 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CXK_CONVR (Q7YZS9) Kappa-conotoxin ViTx precursor 33 4.7
>CXK_CONVR (Q7YZS9) Kappa-conotoxin ViTx precursor
Length = 67
Score = 32.7 bits (73), Expect = 4.7
Identities = 24/65 (36%), Positives = 31/65 (46%), Gaps = 17/65 (26%)
Query: 666 SYACFL----CLSFFYTGLE*NRSF--GVRCNTPFLPLPQLRKLYFICWRLCRLN*NNIC 719
S +CFL CL+ F L +R F G+ C TP+LP CW +C N+C
Sbjct: 7 SVSCFLLVIACLNLFQVVLT-SRCFPPGIYC-TPYLPC---------CWGICCGTCRNVC 55
Query: 720 HLYYG 724
HL G
Sbjct: 56 HLRIG 60
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.365 0.165 0.642
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 90,679,562
Number of Sequences: 164201
Number of extensions: 3250493
Number of successful extensions: 14449
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 14449
Number of HSP's gapped (non-prelim): 1
length of query: 943
length of database: 59,974,054
effective HSP length: 120
effective length of query: 823
effective length of database: 40,269,934
effective search space: 33142155682
effective search space used: 33142155682
T: 11
A: 40
X1: 14 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 36 (21.6 bits)
S2: 71 (32.0 bits)
Medicago: description of AC135231.7