BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC135230.12 + phase: 0
(1373 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
NKCR_HUMAN (P30414) NK-tumor recognition protein (Natural-killer... 44 0.004
VIT_ACITR (Q90243) Vitellogenin precursor (VTG) [Contains: Lipov... 38 0.17
SIS2_YEAST (P36024) SIS2 protein (Halotolerance protein HAL3) 38 0.17
NP14_HUMAN (Q14978) Nucleolar phosphoprotein p130 (Nucleolar 130... 38 0.17
DAXX_HUMAN (Q9UER7) Death domain-associated protein 6 (Daxx) (hD... 38 0.22
BA2B_CHICK (Q9DE13) Bromodomain adjacent to zinc finger domain 2... 38 0.22
MP62_LYTPI (P91753) Mitotic apparatus protein p62 37 0.37
LHS1_CANGA (Q6FU50) Heat shock protein 70 homolog LHS1 precursor 37 0.37
YSW1_YEAST (P38280) Spore-specific protein YSW1 37 0.48
FBSH_MOUSE (Q8R089) Probable fibrosin 1 long transcript protein 37 0.48
CEB2_HUMAN (Q15057) Centaurin beta 2 (Cnt-b2) 37 0.48
ATRX_CAEEL (Q9U7E0) Transcriptional regulator ATRX homolog (X-li... 37 0.48
MLH_TETTH (P40631) Micronuclear linker histone polyprotein (MIC ... 36 0.63
CTR9_YEAST (P89105) CTR9 protein 36 0.63
NMD2_YEAST (P38798) Nonsense-mediated mRNA decay protein 2 (Up-f... 36 0.83
K21A_HUMAN (Q7Z4S6) Kinesin family member 21A (Kinesin-like prot... 36 0.83
YPG1_DICSP (P10511) Hypothetical plasmid pDG1 103 kDa protein 35 1.1
NPM_MOUSE (Q61937) Nucleophosmin (NPM) (Nucleolar phosphoprotein... 35 1.1
UBP1_HUMAN (O94782) Ubiquitin carboxyl-terminal hydrolase 1 (EC ... 35 1.4
FKB4_YEAST (Q06205) FK506-binding protein 4 (EC 5.2.1.8) (Peptid... 35 1.4
>NKCR_HUMAN (P30414) NK-tumor recognition protein (Natural-killer
cells cyclophilin-related protein) (NK-TR protein)
Length = 1462
Score = 43.5 bits (101), Expect = 0.004
Identities = 91/395 (23%), Positives = 152/395 (38%), Gaps = 58/395 (14%)
Query: 453 SHNVDSIHSPDPDDLFYNKRPAQELGMSSLFKYEDWN----PKSKKRKAERESPDLSYTA 508
++++ +I ++ + E S+ KY D + P+S+ R + S SYT
Sbjct: 649 TYSLANIKETGSSSSYHKREKNSESDQSTYSKYSDRSSESSPRSRSRSSRSRSYSRSYTR 708
Query: 509 YR------SSSPQVSNRLFSSDFRTKSSQEKIRGSFV----QNGRKDMKPLRGS-HMLAR 557
R S S S+R S + + SQ S+ +GR+ + LR S +
Sbjct: 709 SRSLASSHSRSRSPSSRSHSRNKYSDHSQCSRSSSYTSISSDDGRRAKRRLRSSGKKNSV 768
Query: 558 GEETESDSSEQWDDDDDNNPLLQSKFAYPIGKAAGSLTKPL---KSHLDPMKAKFSRTDM 614
+ S SSE+ L SK Y G+ S + +S LD + ++ +
Sbjct: 769 SHKKHSSSSEK---------TLHSK--YVKGRDRSSCVRKYSESRSSLD-YSSDSEQSSV 816
Query: 615 KATQSKKIGGFAEQGNMHGADNYLSKNAKKSKIFNGSPVRNPAGKFMEENYPSVSDMLNG 674
+ATQS + +QG M N KN + K + + + ++EN +SD L
Sbjct: 817 QATQSAQ--EKEKQGQMERTHNKQEKNRGEEKSKSERECPHSKKRTLKEN---LSDHLRN 871
Query: 675 GHDDWRQLYK-SKNDQIRDEPVQRFDMPSSTSYAAEHKKKGRIGLDHSSMRSKYLHDYGN 733
G R+ Y SK D + + S+ + K++G D S S+ +H
Sbjct: 872 GSKPKRKNYAGSKWDSESNSERDVTKNSKNDSHPSSDKEEGEATSDSESEVSE-IHIKVK 930
Query: 734 DEDDSLENRLLADENGVGQSRFWRKGQKNVAHKDDRDERSEVPLLGCNSAMKKRKMKFGA 793
S N L D+NG W+ ++ + D S N+ K +K K G+
Sbjct: 931 PTTKSSTNTSLPDDNGA-----WKSSKQRTSTSDSEGSCSNSE----NNRGKPQKHKHGS 981
Query: 794 ADFGERDEDANLLSSNPSKIDDLPAFSLKRKSKKK 828
+ NL + K+ + LK K KK
Sbjct: 982 KE--------NLKREHTKKVKE----KLKGKKDKK 1004
>VIT_ACITR (Q90243) Vitellogenin precursor (VTG) [Contains:
Lipovitellin I (LVI); Phosvitin (PV); Lipovitellin II
(LVII)] (Fragment)
Length = 1677
Score = 38.1 bits (87), Expect = 0.17
Identities = 56/252 (22%), Positives = 93/252 (36%), Gaps = 45/252 (17%)
Query: 376 SSALRVGKRHDLLRGDEIEGGNLMGLSMSSKTD-------LRGYTRNPNQSSDMQLFAAK 428
S +RV L DE++G L L+ D LRG+ R + SS ++
Sbjct: 1050 SKIIRVVAMQSLAEADEMKGNILKKLNKLLTVDGETQDSTLRGFKRRSSSSSSSSSSSSS 1109
Query: 429 PPSKKKGKYAENVQQFVGSRGSKLSHNVDSIHSPDPDDLFYNKRPAQELGMSSLFKYEDW 488
S ++ + KL+ N++ D D + G S K ++W
Sbjct: 1110 SSSSSSSSSSQQSRMEKRMEQDKLTENLER----DRDHM---------RGKQSKNKKQEW 1156
Query: 489 NPKSKKRKAERESPDLSYTAYRSSSPQVSNRLFSSDFRTKSSQEKIRGSFVQNGRKDMKP 548
K+K++K ++ P S ++ SSS S+ + SS S N R + +
Sbjct: 1157 --KNKQKKHHKQLPSSSSSSSSSSS--------GSNSSSSSSSSSSSSSRSHNHRNNTRT 1206
Query: 549 LRGSHMLARGEETESDS-SEQWDDDDDNNPLLQSKFAYPIGKAAGSLTKPLKSHLDPMKA 607
L S + S S S ++ NP + FAY +SH D +
Sbjct: 1207 LSKSKRYQNNNNSSSSSGSSSSSEEIQKNPEI---FAY-----------RFRSHRDKLGF 1252
Query: 608 KFSRTDMKATQS 619
+ R M ++ S
Sbjct: 1253 QNKRGRMSSSSS 1264
>SIS2_YEAST (P36024) SIS2 protein (Halotolerance protein HAL3)
Length = 562
Score = 38.1 bits (87), Expect = 0.17
Identities = 19/50 (38%), Positives = 25/50 (50%)
Query: 23 ESMSSGDEEDVQRRNSGNESDEDDDEFDDADSGAGSDDFDLLELGETGAE 72
E +EED + +N N D+DDD+ DD D DD D + E AE
Sbjct: 504 EEEDDDEEEDTEDKNENNNDDDDDDDDDDDDDDDDDDDDDDDDEDEDEAE 553
Score = 33.9 bits (76), Expect = 3.1
Identities = 16/54 (29%), Positives = 26/54 (47%)
Query: 9 KVSRVDTECEPMSKESMSSGDEEDVQRRNSGNESDEDDDEFDDADSGAGSDDFD 62
K + + + E ++ D ED N+ ++ D+DDD+ DD D DD D
Sbjct: 493 KNNEEEDDDEDEEEDDDEEEDTEDKNENNNDDDDDDDDDDDDDDDDDDDDDDDD 546
>NP14_HUMAN (Q14978) Nucleolar phosphoprotein p130 (Nucleolar 130
kDa protein) (140 kDa nucleolar phosphoprotein)
(Nopp140) (Nucleolar and coiled-body phosphoprotein 1)
Length = 699
Score = 38.1 bits (87), Expect = 0.17
Identities = 51/224 (22%), Positives = 85/224 (37%), Gaps = 25/224 (11%)
Query: 403 MSSKTDLRGYTRNPNQSSDMQLFAAKPPSKKKGKYAENVQQFVGSRGSKLSHNVDSIHSP 462
++ K + + + SS+ + PP+KK A+ V G +K S + S S
Sbjct: 74 VAKKAKKKASSSDSEDSSEEEEEVQGPPAKKAAVPAKRVGLPPGKAAAKASESSSSEESR 133
Query: 463 DPDDLFYNKRPAQELGMSSLFKYEDWNPKSKKRKAERESPDLSYTAYRSSSPQVSNRLFS 522
D DD K+ + G+ P++K KA + S + SS S
Sbjct: 134 DDDDEEDQKKQPVQKGV---------KPQAKAAKAPPKKAKSSDSDSDSS---------S 175
Query: 523 SDFRTKSSQEKIRGSFVQNGRK-DMKPLRGSHMLARGE----ETESDSSEQWDDDDDNNP 577
D K+ + KI V+ K KP R + +A G+ + S SS DD ++
Sbjct: 176 EDEPPKNQKPKITPVTVKAQTKAPPKPARAAPKIANGKAASSSSSSSSSSSSDDSEEEKA 235
Query: 578 LLQSKFAYPIGKAAGSLTKPLKSHLDPMKAKFSRTDMKATQSKK 621
K P K P+K+ P + S D + + ++
Sbjct: 236 AATPKKTVP--KKQVVAKAPVKAATTPTRKSSSSEDSSSDEEEE 277
>DAXX_HUMAN (Q9UER7) Death domain-associated protein 6 (Daxx)
(hDaxx) (Fas death domain-associated protein) (ETS1
associated protein 1) (EAP1)
Length = 740
Score = 37.7 bits (86), Expect = 0.22
Identities = 19/66 (28%), Positives = 35/66 (52%)
Query: 14 DTECEPMSKESMSSGDEEDVQRRNSGNESDEDDDEFDDADSGAGSDDFDLLELGETGAEF 73
+ E E +E+ S +EED+++ G E DE++DE ++A +G D + L + +
Sbjct: 448 EEEEEEEEEEATDSEEEEDLEQMQEGQEDDEEEDEEEEAAAGKDGDKSPMSSLQISNEKN 507
Query: 74 CQIGNQ 79
+ G Q
Sbjct: 508 LEPGKQ 513
>BA2B_CHICK (Q9DE13) Bromodomain adjacent to zinc finger domain 2B
(Extracellular matrix protein F22)
Length = 2130
Score = 37.7 bits (86), Expect = 0.22
Identities = 27/72 (37%), Positives = 38/72 (52%), Gaps = 10/72 (13%)
Query: 18 EPMSKESMSSGDEEDVQRRNSGNESDEDDDEFDDADSGAGSDDFDLLELGE---TGAEFC 74
EP S E+ + G + RR G +SD DDD+ DD+D A DD D + + AE C
Sbjct: 1200 EPHSLETPTPGRK----RRRKGGDSDYDDDDDDDSDDQADEDDEDEEDKEDKKGKKAEVC 1255
Query: 75 Q---IGNQTCSI 83
+ G+QT S+
Sbjct: 1256 EDEDDGDQTVSV 1267
Score = 33.1 bits (74), Expect = 5.4
Identities = 18/48 (37%), Positives = 27/48 (55%), Gaps = 7/48 (14%)
Query: 13 VDTECEPMSKESMSSGDEEDVQRRNSGNESDEDDDEFDDADSGAGSDD 60
VD++ P SKES S D++D +E +++DDE DD+D D
Sbjct: 543 VDSDA-PSSKESDDSNDDDD------DDEDEDEDDEDDDSDDSQSESD 583
>MP62_LYTPI (P91753) Mitotic apparatus protein p62
Length = 411
Score = 37.0 bits (84), Expect = 0.37
Identities = 24/63 (38%), Positives = 31/63 (49%), Gaps = 5/63 (7%)
Query: 4 EKNSFKVSRVDTECEPMS----KESMSSGDEEDVQRRNSGNESDEDDDEFDDADSGAGSD 59
E +KV + E E S +E +EED + G++ DEDDDE DD D G D
Sbjct: 253 EDEDYKVGDEEEEEEATSGEEEEEDEEEEEEEDDEEMALGDDDDEDDDEEDDEDE-EGMD 311
Query: 60 DFD 62
D D
Sbjct: 312 DED 314
Score = 34.7 bits (78), Expect = 1.8
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Query: 13 VDTECEPMSKESMSSGDEEDVQRRNSGNESDED---DDEFDDADSGAGSDD 60
+D + + E GDEE+ + SG E +ED ++E DD + G DD
Sbjct: 245 IDDDEDDEEDEDYKVGDEEEEEEATSGEEEEEDEEEEEEEDDEEMALGDDD 295
>LHS1_CANGA (Q6FU50) Heat shock protein 70 homolog LHS1 precursor
Length = 889
Score = 37.0 bits (84), Expect = 0.37
Identities = 18/51 (35%), Positives = 31/51 (60%), Gaps = 6/51 (11%)
Query: 14 DTECEPMSKESMSSGDEEDVQRRNS------GNESDEDDDEFDDADSGAGS 58
+T+ + KE+ SSGD ++ +S GN+ DE+D+E ++ DS AG+
Sbjct: 833 ETKTKKYLKEATSSGDSSTIKEEDSTGSNEAGNKGDEEDEEEEEDDSSAGN 883
>YSW1_YEAST (P38280) Spore-specific protein YSW1
Length = 609
Score = 36.6 bits (83), Expect = 0.48
Identities = 46/221 (20%), Positives = 86/221 (38%), Gaps = 35/221 (15%)
Query: 386 DLLRGDEIEGGNLMGLSMSSKTDLRGYTRNPNQSSDMQLFAAKPPSKKKGKYAENVQQFV 445
D + G E + G +++S T + ++S ++ + KP + K + V+
Sbjct: 6 DTVEGSEAKRGRFSNNALTSDTGIL------QKNSTLRNWFLKPTADLKNSCEDRVED-- 57
Query: 446 GSRGSKLSHNVDSIHSPDPDDLFYNKRPAQE------LGMSSLFKYEDWNPKSKKRKAER 499
D +D++ N + +Q+ LG ++ N + E
Sbjct: 58 -----------------DVNDVYLNDKNSQKSVEERKLGRKVRSFFKQTNSNKDESVLED 100
Query: 500 ESPDLSYTAYRSSSPQVSNRLFSSDFRTKSSQEKIRGSFVQNGRKDMKPLRGSHMLARGE 559
E L ++ +S + + + S D + S +KIR S ++ D+K R + L
Sbjct: 101 EDDAL---VWKKTSNKCAKKENSHDIQKGSFTKKIRNSIFKSAN-DVKEFRNENNLLLPV 156
Query: 560 ETESDSSEQWDDDDDNNPLLQSKFAYPIGKAAGSLTKPLKS 600
E SD + D N+ ++QSK I LTK K+
Sbjct: 157 ELSSDDENESHFTDANSHVMQSKSPEKIPSKDQCLTKGAKN 197
>FBSH_MOUSE (Q8R089) Probable fibrosin 1 long transcript protein
Length = 378
Score = 36.6 bits (83), Expect = 0.48
Identities = 31/136 (22%), Positives = 58/136 (41%), Gaps = 12/136 (8%)
Query: 1027 PEAWGLPHKMLVKLVDSFANWLKCGQDTLKQIGSLPAPPLELMQINLDEKERFRDLRAQK 1086
P+ WG H+ + +F W++ +T + GS P+E + ++ ++E+ RDL +
Sbjct: 133 PDPWGRLHRSPL----AFPAWVR-PPETARTPGSDKERPMERREPSVTKEEKDRDLPFSR 187
Query: 1087 SLNTISPSSEEVRAYFRKEELLRYSI-------PDRAFSYTAADGKKSIVAPLRRCGGKP 1139
+SP++ + RA + S+ + A + AA + A
Sbjct: 188 PQLRVSPATPKARAGEEGARPAKESVRVKEERKEEAAAAAAAAAAAAAAAAAAAAAAAAT 247
Query: 1140 TSKARDHFMLKRDRPP 1155
T H +L+R RPP
Sbjct: 248 TGPQGLHLLLERPRPP 263
>CEB2_HUMAN (Q15057) Centaurin beta 2 (Cnt-b2)
Length = 778
Score = 36.6 bits (83), Expect = 0.48
Identities = 31/152 (20%), Positives = 68/152 (44%), Gaps = 10/152 (6%)
Query: 1193 DVSDEKINQVVSGALDRLHYERDPCVLFDQERKLWVYLHREREEEDFDDDGTSSTKKWKR 1252
++ ++ IN+V ++++ ++ Q ++ Y+ + E F D + S ++
Sbjct: 469 ELGNDVINRVYEANVEKMGIKKPQP---GQRQEKEAYIRAKYVERKFVDKYSISLSPPEQ 525
Query: 1253 QKKDVADQSDQAPVTVACNGTGEQSGYDLCSDLNVDPPCIEDDKEAVQLLTTDTRPNAED 1312
QKK V+ S++ ++++ G G+Q S + + +Q + D R +
Sbjct: 526 QKKFVSKSSEEKRLSISKFGPGDQVRASAQSS-------VRSNDSGIQQSSDDGRESLPS 578
Query: 1313 QVVVNPVSEVGNSCEDNSMTWEALDLNPTREL 1344
V N + E +D+SM ++ LNP +L
Sbjct: 579 TVSANSLYEPEGERQDSSMFLDSKHLNPGLQL 610
>ATRX_CAEEL (Q9U7E0) Transcriptional regulator ATRX homolog
(X-linked nuclear protein-1)
Length = 1359
Score = 36.6 bits (83), Expect = 0.48
Identities = 54/305 (17%), Positives = 112/305 (36%), Gaps = 23/305 (7%)
Query: 559 EETESDSSEQWDDDDDNNPLLQSKFAYPIGKAAGSLTKPLKSHLDPMKAKFSRTDMKATQ 618
++ ++ SSE+ DDD++ +P SK + K+ + + + D K +
Sbjct: 57 KKRKASSSEEDDDDEEESPRKSSKKSRKRAKSESESDESDEEEDRKKSKSKKKVDQKKKE 116
Query: 619 SKKIGGFAEQGNMHGADNYLSKNAKKSKIFNGSPVRNPAGKFMEENYPSVSDMLNGGHDD 678
K +D + +KK + + + EE N
Sbjct: 117 KSKKKRTTSSSEDEDSDEEREQKSKKKSKKTKKQTSSESSEESEEERKVKKSKKNKEKSV 176
Query: 679 WRQLYKSKNDQIRDEPVQRFD--MPSSTSYAAEHKKKGRIGLDHSSMRSKYLHDYGNDED 736
++ S+ ++P ++ + +E + + + S +SK + ++ +
Sbjct: 177 KKRAETSEESDEDEKPSKKSKKGLKKKAKSESESESEDEKEVKKSKKKSKKVVKKESESE 236
Query: 737 DSLENRLLADENGVGQSRFWRKGQKNVAHKDDRDERSEVPLLGCNSAMKKRKMKFGAADF 796
D + ++ RK K + + E+S+ S+ K +K K A
Sbjct: 237 DEAPEKKKTEK---------RKRSKTSSEESSESEKSDEEEEEKESSPKPKKKKPLAVKK 287
Query: 797 GERDEDANLLSSNPSKIDDLPAFSLKRKSKKKPGAEMVISEMENSELPLTHTVTADVEVE 856
DE+ S S ++ LP KKK GA +IS+ E+ + + + +DVE +
Sbjct: 288 LSSDEE-----SEESDVEVLP-------QKKKRGAVTLISDSEDEKDQKSESEASDVEEK 335
Query: 857 TKPQK 861
+K
Sbjct: 336 VSKKK 340
>MLH_TETTH (P40631) Micronuclear linker histone polyprotein (MIC LH)
[Contains: Micronuclear linker histone-alpha;
Micronuclear linker histone-beta; Micronuclear linker
histone-delta; Micronuclear linker histone-gamma]
Length = 633
Score = 36.2 bits (82), Expect = 0.63
Identities = 52/244 (21%), Positives = 87/244 (35%), Gaps = 12/244 (4%)
Query: 491 KSKKRKAERESPDLSYTAYRSSSPQVSNRLFSSDFRTKSSQEKIRGSFVQNGRKDMKPLR 550
K+KK + + S +SSS + R SS KSS+ K R S GRK +
Sbjct: 272 KNKKSSSSKNKKSSSSKGRKSSSSR--GRKASSSKNRKSSKSKDRKSSSSKGRKSSSSSK 329
Query: 551 GSHMLA---RGEETESDSSEQWDDDDD--NNPLLQSKFAYPIGKAAGSLTKPLKSHLDPM 605
+ A RG ++ S + + N+ SK G+ + K D
Sbjct: 330 SNKRKASSSRGRKSSSSKGRKSSKSQERKNSHADTSKQMEDEGQKRRQSSSSAKR--DES 387
Query: 606 KAKFSRTDMKATQSKKIGGFAEQGNMHGADNYLSKNAKKSKIFNGSPVRNPAGKFMEENY 665
K R MK ++KK + K+A KSK + S +N + +
Sbjct: 388 SKKSRRNSMKEARTKKANNKSASKASKSGSKSKGKSASKSKGKSSSKGKNSKSRSASKPK 447
Query: 666 PSVSDMLNGGH---DDWRQLYKSKNDQIRDEPVQRFDMPSSTSYAAEHKKKGRIGLDHSS 722
+ + N H D + + R ++ DM + S + K + ++
Sbjct: 448 SNAAQNSNNTHQTADSSENASSTTQTRTRGRQREQKDMVNEKSNSKSSSKGKKNSKSNTR 507
Query: 723 MRSK 726
+SK
Sbjct: 508 SKSK 511
>CTR9_YEAST (P89105) CTR9 protein
Length = 1077
Score = 36.2 bits (82), Expect = 0.63
Identities = 32/164 (19%), Positives = 74/164 (44%), Gaps = 20/164 (12%)
Query: 418 QSSDMQLFAAKPPSKKKGKYAENVQQFVGSRGSKL--SHNV-DSIHSPDPDDLFYNKRPA 474
Q + + + +++ K + Q+ + R + HNV D D D+ + ++P
Sbjct: 930 QEEEARRLKLEKQAEEYRKLQDEAQKLIQEREAMAISEHNVKDDSDLSDKDNEYDEEKPR 989
Query: 475 QELGMSSLFKYEDWNPKSKKRKAERESPDLSYTAYRSSSPQVSNRLFSSDFRTKSSQEKI 534
Q+ S+ K +SK+RKA +++ S S + + + K + ++
Sbjct: 990 QKRKRSTKTKNSG---ESKRRKAAKKT--------LSDSDEDDDDVVKKPSHNKGKKSQL 1038
Query: 535 RGSFVQNGRKDMKPLRGSHMLARGEETESDSSEQWDDDDDNNPL 578
F+++ ++ + GS E+ ++D +++ +D+DDN+ L
Sbjct: 1039 SNEFIEDSDEEEAQMSGS------EQNKNDDNDENNDNDDNDGL 1076
>NMD2_YEAST (P38798) Nonsense-mediated mRNA decay protein 2
(Up-frameshift suppressor 2)
Length = 1089
Score = 35.8 bits (81), Expect = 0.83
Identities = 16/59 (27%), Positives = 29/59 (49%)
Query: 4 EKNSFKVSRVDTECEPMSKESMSSGDEEDVQRRNSGNESDEDDDEFDDADSGAGSDDFD 62
E ++S +TE P ++ E++ + ++ D+DDD+ DD + G DD D
Sbjct: 861 EDEDAEISTPNTESAPGKHQAKQDESEDEDDEDDDEDDDDDDDDDDDDGEEGDEDDDED 919
Score = 32.3 bits (72), Expect = 9.1
Identities = 17/59 (28%), Positives = 26/59 (43%)
Query: 14 DTECEPMSKESMSSGDEEDVQRRNSGNESDEDDDEFDDADSGAGSDDFDLLELGETGAE 72
D + E ++ D++D + DEDDD+ DD D D DL G+ A+
Sbjct: 888 DEDDEDDDEDDDDDDDDDDDDGEEGDEDDDEDDDDEDDDDEEEEDSDSDLEYGGDLDAD 946
>K21A_HUMAN (Q7Z4S6) Kinesin family member 21A (Kinesin-like protein
KIF2) (NY-REN-62 antigen)
Length = 1674
Score = 35.8 bits (81), Expect = 0.83
Identities = 25/93 (26%), Positives = 42/93 (44%), Gaps = 7/93 (7%)
Query: 9 KVSRVDTECEPMSKESMSSGDEEDVQRRNSGNESD------EDDDEFDDADSGAGSDDFD 62
K DT+ E ++ +S + +++ S SD E+++E DD D G SD+ D
Sbjct: 575 KEDNTDTDQEKKEEKGVSERENNELEVEESQEVSDHEDEEEEEEEEEDDIDGGESSDESD 634
Query: 63 LLELGETGAEFCQIGNQTCSIPLELYDLSGLED 95
E E + N TC I ++ + LE+
Sbjct: 635 -SESDEKANYQADLANITCEIAIKQKLIDELEN 666
>YPG1_DICSP (P10511) Hypothetical plasmid pDG1 103 kDa protein
Length = 906
Score = 35.4 bits (80), Expect = 1.1
Identities = 15/31 (48%), Positives = 18/31 (57%)
Query: 30 EEDVQRRNSGNESDEDDDEFDDADSGAGSDD 60
E+D GNE DED+DE +D D G G D
Sbjct: 869 EDDDDDEGEGNEDDEDNDENEDEDEGEGEGD 899
>NPM_MOUSE (Q61937) Nucleophosmin (NPM) (Nucleolar phosphoprotein
B23) (Numatrin) (Nucleolar protein NO38)
Length = 292
Score = 35.4 bits (80), Expect = 1.1
Identities = 19/47 (40%), Positives = 24/47 (50%)
Query: 22 KESMSSGDEEDVQRRNSGNESDEDDDEFDDADSGAGSDDFDLLELGE 68
K S G + Q++ +E DEDDDE D+ D DDFD E E
Sbjct: 141 KRSAPGGGNKVPQKKVKLDEDDEDDDEDDEDDEDDDDDDFDEEETEE 187
>UBP1_HUMAN (O94782) Ubiquitin carboxyl-terminal hydrolase 1 (EC
3.1.2.15) (Ubiquitin thiolesterase 1)
(Ubiquitin-specific processing protease 1)
(Deubiquitinating enzyme 1) (hUBP)
Length = 785
Score = 35.0 bits (79), Expect = 1.4
Identities = 27/105 (25%), Positives = 47/105 (44%), Gaps = 18/105 (17%)
Query: 854 EVETKPQKKPYILITPTVHTGFSFSIMHLLTAVRTAMISPPEVES--------LEAGKPV 905
E TKP Y L +H+G + S H +V+ ++ E++ E GKP
Sbjct: 566 EWSTKPTNDSYGLFAVVMHSGITISSGHYTASVKVTDLNSLELDKGNFVVDQMCEIGKP- 624
Query: 906 EQQNKAQEDSLNGVI---SSDKVDDKVAANVEPS---DQKNVPSL 944
E+ GV+ + ++V +V N +PS ++KNV ++
Sbjct: 625 ---EPLNEEEARGVVENYNDEEVSIRVGGNTQPSKVLNKKNVEAI 666
>FKB4_YEAST (Q06205) FK506-binding protein 4 (EC 5.2.1.8)
(Peptidyl-prolyl cis-trans isomerase) (PPIase)
(Rotamase)
Length = 392
Score = 35.0 bits (79), Expect = 1.4
Identities = 17/46 (36%), Positives = 24/46 (51%), Gaps = 2/46 (4%)
Query: 19 PMSKESMSSGDEEDV--QRRNSGNESDEDDDEFDDADSGAGSDDFD 62
P S S DEED +S E +E+++E DD + +G DD D
Sbjct: 167 PFDNSSDSDEDEEDYYSDEESSNGEEEEEEEEEDDEELSSGDDDLD 212
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.312 0.131 0.379
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 170,148,648
Number of Sequences: 164201
Number of extensions: 7774997
Number of successful extensions: 20965
Number of sequences better than 10.0: 69
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 42
Number of HSP's that attempted gapping in prelim test: 20120
Number of HSP's gapped (non-prelim): 486
length of query: 1373
length of database: 59,974,054
effective HSP length: 123
effective length of query: 1250
effective length of database: 39,777,331
effective search space: 49721663750
effective search space used: 49721663750
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 72 (32.3 bits)
Medicago: description of AC135230.12