BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC135230.10 - phase: 0
(548 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
LFNG_XENLA (P79948) Beta-1,3-N-acetylglucosaminyltransferase lun... 48 8e-05
LFNG_HUMAN (Q8NES3) Beta-1,3-N-acetylglucosaminyltransferase lun... 45 4e-04
LFNG_RAT (Q924T4) Beta-1,3-N-acetylglucosaminyltransferase lunat... 44 8e-04
LFNG_MOUSE (O09010) Beta-1,3-N-acetylglucosaminyltransferase lun... 44 0.001
LFNG_CHICK (O12971) Beta-1,3-N-acetylglucosaminyltransferase lun... 44 0.001
FNG_DROME (Q24342) Fringe glycosyltransferase (EC 2.4.1.222) (O-... 42 0.005
LFNG_BRARE (Q8JHF2) Beta-1,3-N-acetylglucosaminyltransferase lun... 41 0.007
RFNG_XENLA (P79949) Beta-1,3-N-acetylglucosaminyltransferase rad... 40 0.016
RFNG_CHICK (O12972) Beta-1,3-N-acetylglucosaminyltransferase rad... 39 0.027
NKX1_HUMAN (O60721) Sodium/potassium/calcium exchanger 1 precurs... 39 0.027
TRT_DROME (P19351) Troponin T, skeletal muscle (Upheld protein) ... 39 0.046
NUCL_HUMAN (P19338) Nucleolin (Protein C23) 37 0.10
GARP_PLAFF (P13816) Glutamic acid-rich protein precursor 37 0.13
YGR4_YEAST (P53107) Hypothetical 50.3 kDa protein in ACE1-RAD54 ... 37 0.17
YCF2_OENPI (P31568) Protein ycf2 (Fragment) 37 0.17
NUCL_MOUSE (P09405) Nucleolin (Protein C23) 37 0.17
B3G7_MOUSE (Q9Z222) Beta-1,3-galactosyltransferase 7 (EC 2.4.1.-... 37 0.17
YJM3_YEAST (P47018) Hypothetical 53.5 kDa protein in GCD14-POS18... 36 0.23
NUCL_MESAU (P08199) Nucleolin (Protein C23) 36 0.23
THYP_BOVIN (P08814) Parathymosin 36 0.30
>LFNG_XENLA (P79948) Beta-1,3-N-acetylglucosaminyltransferase
lunatic fringe (EC 2.4.1.222) (O-fucosylpeptide
3-beta-N-acetylglucosaminyltransferase)
Length = 375
Score = 47.8 bits (112), Expect = 8e-05
Identities = 35/120 (29%), Positives = 56/120 (46%), Gaps = 15/120 (12%)
Query: 184 DIRISDDTSKFRYTNRQGQRSALRIS-RVVTETLKLGLKDVRWFVMGDDDTVFVVDNVVR 242
D + T TN S +S ++ E K D +WF DDD V +V+
Sbjct: 149 DEELQKKTGNVISTNCSAAHSRQALSCKMAVEYDKFIESDKKWFCHVDDDNYVNVRTLVK 208
Query: 243 ILSKYDHRHFYYVGSS------------SESHVQNIHFSYAMAYGGGGFAISYPLAVELA 290
+LS+Y H + Y+G SES+++ ++F +A GG GF IS LA++++
Sbjct: 209 LLSRYSHTNDIYIGKPSLDRPIQATERISESNMRPVNFWFAT--GGAGFCISRGLALKMS 266
>LFNG_HUMAN (Q8NES3) Beta-1,3-N-acetylglucosaminyltransferase
lunatic fringe (EC 2.4.1.222) (O-fucosylpeptide
3-beta-N-acetylglucosaminyltransferase)
Length = 379
Score = 45.4 bits (106), Expect = 4e-04
Identities = 36/123 (29%), Positives = 55/123 (44%), Gaps = 18/123 (14%)
Query: 224 RWFVMGDDDTVFVVDNVVRILSKYDHRHFYYVGSS------------SESHVQNIHFSYA 271
+WF DDD + ++R+L+ Y H YVG SE+ V+ +HF +A
Sbjct: 194 KWFCHVDDDNYVNLRALLRLLASYPHTRDVYVGKPSLDRPIQAMERVSENKVRPVHFWFA 253
Query: 272 MAYGGGGFAISYPLAVELATMQD--RCIQRYPALYGSDDRMQACMAE--LGVPLTKEAGF 327
GG GF IS LA++++ + + DD + E LGVPL + F
Sbjct: 254 T--GGAGFCISRGLALKMSPWASGGHFMNTAERIRLPDDCTIGYIVEALLGVPLIRSGLF 311
Query: 328 HQY 330
H +
Sbjct: 312 HSH 314
>LFNG_RAT (Q924T4) Beta-1,3-N-acetylglucosaminyltransferase lunatic
fringe (EC 2.4.1.222) (O-fucosylpeptide
3-beta-N-acetylglucosaminyltransferase)
Length = 378
Score = 44.3 bits (103), Expect = 8e-04
Identities = 35/123 (28%), Positives = 53/123 (42%), Gaps = 18/123 (14%)
Query: 224 RWFVMGDDDTVFVVDNVVRILSKYDHRHFYYVGSS------------SESHVQNIHFSYA 271
+WF DDD + ++R+L+ Y H Y+G SE V+ +HF +A
Sbjct: 193 KWFCHVDDDNYVNLRALLRLLASYPHTQDVYIGKPSLDRPIQATERISEHRVRPVHFWFA 252
Query: 272 MAYGGGGFAISYPLAVELATMQD--RCIQRYPALYGSDDRMQACMAE--LGVPLTKEAGF 327
GG GF IS LA+++ + + DD + E LGVPL + F
Sbjct: 253 T--GGAGFCISRGLALKMGPWASGGHFMSTAERIRLPDDCTIGYIVEALLGVPLIRSGLF 310
Query: 328 HQY 330
H +
Sbjct: 311 HSH 313
>LFNG_MOUSE (O09010) Beta-1,3-N-acetylglucosaminyltransferase
lunatic fringe (EC 2.4.1.222) (O-fucosylpeptide
3-beta-N-acetylglucosaminyltransferase)
Length = 378
Score = 43.9 bits (102), Expect = 0.001
Identities = 35/123 (28%), Positives = 53/123 (42%), Gaps = 18/123 (14%)
Query: 224 RWFVMGDDDTVFVVDNVVRILSKYDHRHFYYVGSS------------SESHVQNIHFSYA 271
+WF DDD + ++R+L+ Y H Y+G SE V+ +HF +A
Sbjct: 193 KWFCHVDDDNYVNLRALLRLLASYPHTQDVYIGKPSLDRPIQATERISEHKVRPVHFWFA 252
Query: 272 MAYGGGGFAISYPLAVELATMQD--RCIQRYPALYGSDDRMQACMAE--LGVPLTKEAGF 327
GG GF IS LA+++ + + DD + E LGVPL + F
Sbjct: 253 T--GGAGFCISRGLALKMGPWASGGHFMSTAERIRLPDDCTIGYIVEALLGVPLIRSGLF 310
Query: 328 HQY 330
H +
Sbjct: 311 HSH 313
>LFNG_CHICK (O12971) Beta-1,3-N-acetylglucosaminyltransferase
lunatic fringe (EC 2.4.1.222) (O-fucosylpeptide
3-beta-N-acetylglucosaminyltransferase)
Length = 363
Score = 43.9 bits (102), Expect = 0.001
Identities = 26/79 (32%), Positives = 39/79 (48%), Gaps = 14/79 (17%)
Query: 224 RWFVMGDDDTVFVVDNVVRILSKYDHRHFYYVGSS------------SESHVQNIHFSYA 271
+WF DDD V +V++LS Y H Y+G SE+ + +HF +A
Sbjct: 178 KWFCHVDDDNYVNVRTLVKLLSSYPHTQDIYIGKPSLDRPIQATERISENKMHPVHFWFA 237
Query: 272 MAYGGGGFAISYPLAVELA 290
GG GF IS LA++++
Sbjct: 238 T--GGAGFCISRGLALKMS 254
>FNG_DROME (Q24342) Fringe glycosyltransferase (EC 2.4.1.222)
(O-fucosylpeptide
3-beta-N-acetylglucosaminyltransferase)
Length = 412
Score = 41.6 bits (96), Expect = 0.005
Identities = 61/247 (24%), Positives = 93/247 (36%), Gaps = 36/247 (14%)
Query: 104 REGEGEEQENKSPIVVRLTPEQMAQRQDTELKHIVFGIAASSNLWNTRKEYI-KIWWRPK 162
R GE + S V TP+ TEL I + + N +TR I K W++
Sbjct: 121 RSRNGELLRDLSQRAVTATPQPPV----TELDDIFISVKTTKNYHDTRLALIIKTWFQ-- 174
Query: 163 QTRGVVWL----DQRVSTQRNEGLPDIRISDDTSKFRYTNRQGQRSALRISRVVTETLKL 218
R W D ++ +G I FR + ++S + L+
Sbjct: 175 LARDQTWFFTDTDDHYYQEKTKGHL-INTKCSQGHFR------KALCCKMSAELDVFLES 227
Query: 219 GLKDVRWFVMGDDDTVFVVDNVVRILSKYDHRHFYYVGSSSESHVQNIH----------- 267
G K WF DDD V +V++L +Y +Y+G S S IH
Sbjct: 228 GKK---WFCHFDDDNYVNVPRLVKLLDEYSPSVDWYLGKPSISSPLEIHLDSKNTTTNKK 284
Query: 268 FSYAMAYGGGGFAISYPLAVELATMQ--DRCIQRYPALYGSDDRMQACMAE--LGVPLTK 323
++ A GG GF +S L +++ + + I + DD + E L VPLT
Sbjct: 285 ITFWFATGGAGFCLSRALTLKMLPIAGGGKFISIGDKIRFPDDVTMGFIIEHLLKVPLTV 344
Query: 324 EAGFHQY 330
FH +
Sbjct: 345 VDNFHSH 351
>LFNG_BRARE (Q8JHF2) Beta-1,3-N-acetylglucosaminyltransferase
lunatic fringe (EC 2.4.1.222) (O-fucosylpeptide
3-beta-N-acetylglucosaminyltransferase)
Length = 374
Score = 41.2 bits (95), Expect = 0.007
Identities = 33/123 (26%), Positives = 55/123 (43%), Gaps = 18/123 (14%)
Query: 224 RWFVMGDDDTVFVVDNVVRILSKYDHRHFYYVGSSS------------ESHVQNIHFSYA 271
+WF DDD +V++LS Y H Y+G S ++ ++ ++F +A
Sbjct: 189 KWFCHVDDDNYVNTKTLVKLLSNYPHTQDMYIGKPSLDRPIEATERLGDNKMRPVNFWFA 248
Query: 272 MAYGGGGFAISYPLAVELATMQD--RCIQRYPALYGSDDRMQACMAE--LGVPLTKEAGF 327
GG GF IS LA++++ + + DD + E LGV LT+ + F
Sbjct: 249 T--GGAGFCISRGLALKMSPWASGGHFMNTAEKIRLPDDCTIGYIIESVLGVSLTRSSLF 306
Query: 328 HQY 330
H +
Sbjct: 307 HSH 309
>RFNG_XENLA (P79949) Beta-1,3-N-acetylglucosaminyltransferase
radical fringe (EC 2.4.1.222) (O-fucosylpeptide
3-beta-N-acetylglucosaminyltransferase)
Length = 340
Score = 40.0 bits (92), Expect = 0.016
Identities = 27/91 (29%), Positives = 42/91 (45%), Gaps = 10/91 (10%)
Query: 210 RVVTETLKLGLKDVRWFVMGDDDTVFVVDNVVRILSKYDHRHFYYVGSSSESH-VQNI-- 266
++ E K L D +WF DDD + ++ +LS + H YVG S H V+ +
Sbjct: 162 KMAVEYDKFVLSDKKWFCHLDDDNYLNLHALLDLLSTFSHSTDVYVGRPSLDHPVETVDR 221
Query: 267 -------HFSYAMAYGGGGFAISYPLAVELA 290
+ A GG GF IS LA++++
Sbjct: 222 MKGDGSGSLKFWFATGGAGFCISRGLALKMS 252
>RFNG_CHICK (O12972) Beta-1,3-N-acetylglucosaminyltransferase
radical fringe (EC 2.4.1.222) (O-fucosylpeptide
3-beta-N-acetylglucosaminyltransferase)
Length = 372
Score = 39.3 bits (90), Expect = 0.027
Identities = 45/188 (23%), Positives = 75/188 (38%), Gaps = 28/188 (14%)
Query: 119 VRLTPEQMAQRQDTELKHIVFGIAASSNLWNTRKEYIKIWWRPKQTRGVV-----WLDQR 173
VR+ P + ++ ELK I + + TR E + W + RG W D+
Sbjct: 88 VRMGPPGGSAKESLELKDIFIAVKTTRKYHKTRLELLFQTWISR-ARGQTFIFTDWEDRE 146
Query: 174 VSTQRNEGLPDIRISDDTSKFRYTNRQGQRSALRISRVVTETLKLGLKDVRWFVMGDDDT 233
+ + + + + S ++ Q ++S + L+ G K WF DDD
Sbjct: 147 LRLKAGDHMINTNCSAVHTR--------QALCCKMSVEYDKFLESGQK---WFCHVDDDN 195
Query: 234 VFVVDNVVRILSKYDHRHFYYVGSSS-------ESHVQN----IHFSYAMAYGGGGFAIS 282
++R+LS + YVG S HVQ+ + A GG GF IS
Sbjct: 196 YVNPRTLLRLLSAFSPSQDVYVGRPSLDHPIEAADHVQSDGSKTSVKFWFATGGAGFCIS 255
Query: 283 YPLAVELA 290
LA++++
Sbjct: 256 RGLALKMS 263
>NKX1_HUMAN (O60721) Sodium/potassium/calcium exchanger 1 precursor
(Na(+)/K(+)/Ca(2+)-exchange protein 1) (Retinal rod
Na-Ca+K exchanger)
Length = 1099
Score = 39.3 bits (90), Expect = 0.027
Identities = 25/97 (25%), Positives = 41/97 (41%), Gaps = 21/97 (21%)
Query: 83 ENKEQMQDETEKETEQDEDDFREGEGEEQENKSPIVVRLTPEQMAQ-------------- 128
E +E+ Q+E E+E EQ+E++ E E EE+ N+ P+ + + Q
Sbjct: 863 EEEEEEQEEEEEEEEQEEEEEEEEEEEEKGNEEPLSLDWPETRQKQAIYLFLLPIVFPLW 922
Query: 129 ------RQDTELKHIVFGIAASSNLWNTRKEYIKIWW 159
R+ K VF S +W Y+ +WW
Sbjct: 923 LTVPDVRRQESRKFFVFTFLGSI-MWIAMFSYLMVWW 958
>TRT_DROME (P19351) Troponin T, skeletal muscle (Upheld protein)
(Intended thorax protein)
Length = 396
Score = 38.5 bits (88), Expect = 0.046
Identities = 16/43 (37%), Positives = 30/43 (69%)
Query: 72 DKNIEHKVLPIENKEQMQDETEKETEQDEDDFREGEGEEQENK 114
D+ +E +V+ E++E +DE E+E E++E++ E E EE+E +
Sbjct: 348 DEEVEEEVVEEEDEEDEEDEEEEEEEEEEEEEEEEEEEEEEEE 390
Score = 31.6 bits (70), Expect = 5.6
Identities = 14/34 (41%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 82 IENKEQMQDET-EKETEQDEDDFREGEGEEQENK 114
+E+ E++++E E+E E+DE+D E E EE+E +
Sbjct: 345 VEDDEEVEEEVVEEEDEEDEEDEEEEEEEEEEEE 378
>NUCL_HUMAN (P19338) Nucleolin (Protein C23)
Length = 706
Score = 37.4 bits (85), Expect = 0.10
Identities = 18/62 (29%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 53 DDTTQDDVHMTSYNISSTSDKNIEHKVLPIENKEQMQDETEKETEQDEDDFREGEGEEQE 112
DD +DD + + K KV+P++ K +DE E+E ++DEDD + + E+ +
Sbjct: 198 DDDEEDDSEEEAMETTPAKGKKAA-KVVPVKAKNVAEDEDEEEDDEDEDDDDDEDDEDDD 256
Query: 113 NK 114
++
Sbjct: 257 DE 258
>GARP_PLAFF (P13816) Glutamic acid-rich protein precursor
Length = 678
Score = 37.0 bits (84), Expect = 0.13
Identities = 17/49 (34%), Positives = 29/49 (58%)
Query: 66 NISSTSDKNIEHKVLPIENKEQMQDETEKETEQDEDDFREGEGEEQENK 114
++ DK E K + E+KE +DE E E +++E++ E E EE+E +
Sbjct: 544 HVDKEEDKKEESKEVQEESKEVQEDEEEVEEDEEEEEEEEEEEEEEEEE 592
Score = 32.7 bits (73), Expect = 2.5
Identities = 13/32 (40%), Positives = 22/32 (68%)
Query: 83 ENKEQMQDETEKETEQDEDDFREGEGEEQENK 114
E +E+ ++E E E E+DEDD E E + +E++
Sbjct: 595 EEEEEEEEEEEDEDEEDEDDAEEDEDDAEEDE 626
Score = 32.3 bits (72), Expect = 3.3
Identities = 13/42 (30%), Positives = 26/42 (60%)
Query: 73 KNIEHKVLPIENKEQMQDETEKETEQDEDDFREGEGEEQENK 114
K ++ +E E+ ++E E+E E++E++ E E EE+E +
Sbjct: 563 KEVQEDEEEVEEDEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 604
Score = 32.3 bits (72), Expect = 3.3
Identities = 14/39 (35%), Positives = 27/39 (68%)
Query: 76 EHKVLPIENKEQMQDETEKETEQDEDDFREGEGEEQENK 114
E +V E +E+ ++E E+E E++E++ E E EE+E++
Sbjct: 569 EEEVEEDEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEDE 607
Score = 32.3 bits (72), Expect = 3.3
Identities = 13/31 (41%), Positives = 22/31 (70%)
Query: 83 ENKEQMQDETEKETEQDEDDFREGEGEEQEN 113
E +E+ ++E E+E E+DED+ E + EE E+
Sbjct: 590 EEEEEEEEEEEEEEEEDEDEEDEDDAEEDED 620
Score = 31.6 bits (70), Expect = 5.6
Identities = 16/58 (27%), Positives = 33/58 (56%)
Query: 57 QDDVHMTSYNISSTSDKNIEHKVLPIENKEQMQDETEKETEQDEDDFREGEGEEQENK 114
++D S + S + E + E++E+ ++E E+E E++E++ E E EE+E +
Sbjct: 548 EEDKKEESKEVQEESKEVQEDEEEVEEDEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 605
>YGR4_YEAST (P53107) Hypothetical 50.3 kDa protein in ACE1-RAD54
intergenic region
Length = 440
Score = 36.6 bits (83), Expect = 0.17
Identities = 30/161 (18%), Positives = 72/161 (44%), Gaps = 20/161 (12%)
Query: 37 LLFNNEQECPMTTTTLDDTTQDDVHMTSYNISSTSDKNIEHKVL--PIENKEQMQDETEK 94
LL EQ+ P+ +D + + N SS DK + + + E ++++ E+
Sbjct: 294 LLRLEEQDSPVLVLKIDRSDDKE------NESSEGDKGLLDDITWYAVSGYEAIEEDEEE 347
Query: 95 ETEQDEDDFREGEGEEQENKSPIVVRLTPEQMAQRQDTELKHIVFGIAASSNLWNTRKEY 154
+ E+DE++ ++GE ++E + E + +D+ + + + I +S N +K
Sbjct: 348 DEEEDEEEGKDGEERKEEEEE--------ENKLEDKDSSITLLEYIIRLTSLQSNDQKSI 399
Query: 155 IKIWWRPKQTRGVVWLDQRVSTQRNEGLPDIRISDDTSKFR 195
+++ R ++L+ + R + + + I + K +
Sbjct: 400 LEV----SDERLSIYLNDENTNSRKDRISNSTIEETEKKLK 436
>YCF2_OENPI (P31568) Protein ycf2 (Fragment)
Length = 721
Score = 36.6 bits (83), Expect = 0.17
Identities = 20/71 (28%), Positives = 34/71 (47%)
Query: 56 TQDDVHMTSYNISSTSDKNIEHKVLPIENKEQMQDETEKETEQDEDDFREGEGEEQENKS 115
T+++V T + T D+ +E +E E+ + TE+E E E++ E EE E
Sbjct: 196 TEEEVEGTEEEVEGTEDEEVEGTEEEVEGTEEEVEGTEEEVEGTEEEVEGTEDEEVEGTE 255
Query: 116 PIVVRLTPEQM 126
V T E++
Sbjct: 256 DEEVEGTEEEV 266
Score = 35.8 bits (81), Expect = 0.30
Identities = 27/100 (27%), Positives = 46/100 (46%), Gaps = 7/100 (7%)
Query: 42 EQECPMTTTTLDDTTQDDVHMTSYNISSTSDKNIEHKVLPIENKEQMQDETEKETEQDED 101
E+E T + T+++V T + T D+ +E +E E+ + TE+E E E+
Sbjct: 306 EEEVEGTEDEEVEGTEEEVEGTEEEVEGTEDEEVEGTEEEVEGTEEEVEGTEEEVEGTEE 365
Query: 102 DFREGEGEEQENKSPIV------VRLTPEQMAQRQDTELK 135
+ EG EE E V V T E++ +D E++
Sbjct: 366 EV-EGTEEEVEGTEEEVEGTEEEVEGTEEEVEGTEDEEVE 404
Score = 34.3 bits (77), Expect = 0.86
Identities = 23/94 (24%), Positives = 42/94 (44%), Gaps = 1/94 (1%)
Query: 42 EQECPMTTTTLDDTTQDDVHMTSYNISSTSDKNIEHKVLPIENKEQMQDETEKETEQDED 101
E+E T ++ T ++ + T D+ +E +E E+ + TE+E E E+
Sbjct: 226 EEEVEGTEEEVEGTEEEVEGTEDEEVEGTEDEEVEGTEEEVEGTEEEVEGTEEEVEGTEE 285
Query: 102 DFREGEGEEQENKSPIVVRLTPEQMAQRQDTELK 135
+ E EE E V T E++ +D E++
Sbjct: 286 EVEGTEDEEVEGTEE-EVEGTEEEVEGTEDEEVE 318
Score = 33.9 bits (76), Expect = 1.1
Identities = 21/92 (22%), Positives = 44/92 (47%), Gaps = 5/92 (5%)
Query: 72 DKNIEHKVLPIENKEQMQDETEKETEQDEDDFREGEGEEQENKSPIVVRLTPEQMAQRQD 131
D+ +E + ++ +E DE E+E +++ED+ E E EE+E + E Q D
Sbjct: 536 DELLEEEDEELDEEEDELDEEEEEPKEEEDELHEEEEEEEEEEEE-----EEEDELQEND 590
Query: 132 TELKHIVFGIAASSNLWNTRKEYIKIWWRPKQ 163
+E + I ++ +K+ ++ P++
Sbjct: 591 SEFFRVKPIIPRHRWIFRKKKDVFEVLSYPEE 622
Score = 32.7 bits (73), Expect = 2.5
Identities = 22/92 (23%), Positives = 38/92 (40%)
Query: 42 EQECPMTTTTLDDTTQDDVHMTSYNISSTSDKNIEHKVLPIENKEQMQDETEKETEQDED 101
E+E T + T+++V T + T D+ +E +E E+ + TE E + +
Sbjct: 284 EEEVEGTEDEEVEGTEEEVEGTEEEVEGTEDEEVEGTEEEVEGTEEEVEGTEDEEVEGTE 343
Query: 102 DFREGEGEEQENKSPIVVRLTPEQMAQRQDTE 133
+ EG EE E V E ++ E
Sbjct: 344 EEVEGTEEEVEGTEEEVEGTEEEVEGTEEEVE 375
Score = 31.6 bits (70), Expect = 5.6
Identities = 22/74 (29%), Positives = 36/74 (47%), Gaps = 6/74 (8%)
Query: 68 SSTSDKNIEHKVLPIENKEQMQDETEKETEQDEDDFREGEGEEQENKSPIV------VRL 121
SS +++ +E +E E+ + TE+E E ED+ EG EE E V V
Sbjct: 179 SSPTEEEVEGTEEEVEGTEEEVEGTEEEVEGTEDEEVEGTEEEVEGTEEEVEGTEEEVEG 238
Query: 122 TPEQMAQRQDTELK 135
T E++ +D E++
Sbjct: 239 TEEEVEGTEDEEVE 252
Score = 31.6 bits (70), Expect = 5.6
Identities = 21/85 (24%), Positives = 39/85 (45%), Gaps = 8/85 (9%)
Query: 42 EQECPMTTTTLDDTTQDDVHMTSYNISSTSDKNIEHKVLPIENKEQMQDETEKETEQDED 101
E+E T ++ T ++V T + T ++ +E E+ + TE+E E ED
Sbjct: 197 EEEVEGTEEEVEGTEDEEVEGTEEEVEGTEEE--------VEGTEEEVEGTEEEVEGTED 248
Query: 102 DFREGEGEEQENKSPIVVRLTPEQM 126
+ EG +E+ + V T E++
Sbjct: 249 EEVEGTEDEEVEGTEEEVEGTEEEV 273
>NUCL_MOUSE (P09405) Nucleolin (Protein C23)
Length = 706
Score = 36.6 bits (83), Expect = 0.17
Identities = 18/71 (25%), Positives = 37/71 (51%), Gaps = 6/71 (8%)
Query: 53 DDTTQDDVHMTSYNISSTSDKNIEHKVLPIENKEQMQDETEKETEQDEDD------FREG 106
D+ +DD I++ K KV+P++ K ++E ++E ++D++D E
Sbjct: 204 DEEEEDDSEEEVMEITTAKGKKTPAKVVPMKAKSVAEEEDDEEEDEDDEDEDDEEEDDED 263
Query: 107 EGEEQENKSPI 117
+ EE+E + P+
Sbjct: 264 DDEEEEEEEPV 274
Score = 32.7 bits (73), Expect = 2.5
Identities = 16/43 (37%), Positives = 25/43 (57%)
Query: 85 KEQMQDETEKETEQDEDDFREGEGEEQENKSPIVVRLTPEQMA 127
K++ DE E E ++D+ D E + EE E + PIV + P + A
Sbjct: 140 KKEDSDEDEDEEDEDDSDEDEDDEEEDEFEPPIVKGVKPAKAA 182
>B3G7_MOUSE (Q9Z222) Beta-1,3-galactosyltransferase 7 (EC 2.4.1.-)
(Beta-1,3-GalTase 7) (Beta3Gal-T7) (b3Gal-T7)
(UDP-galactose:beta-N-acetylglucosamine
beta-1,3-galactosyltransferase 7) (UDP-Gal:beta-GlcNAc
beta-1,3-galactosyltransferase 7) (Beta-3-Gx-T7
Length = 397
Score = 36.6 bits (83), Expect = 0.17
Identities = 39/143 (27%), Positives = 59/143 (40%), Gaps = 32/143 (22%)
Query: 218 LGLKDV---RW---------FVMGDDDTVFV----VDNVVRILSKYDHRHFY-------- 253
L LK+V RW FV DD VFV + N + LSK + +
Sbjct: 220 LSLKEVLFLRWVSTSCPDAEFVFKGDDDVFVNTHHILNYLNSLSKSKAKDLFIGDVIHNA 279
Query: 254 --YVGSSSESHVQNIHFS--YAMAYGGGGFAISYPLAVELATMQDRCIQRYPALYGSDDR 309
+ + ++ + ++ Y GGGGF S PLA+ L + R + YP D
Sbjct: 280 GPHRDKKLKYYIPEVFYTGVYPPYAGGGGFLYSGPLALRLYSATSR-VHLYPI---DDVY 335
Query: 310 MQACMAELGVPLTKEAGFHQYDV 332
C+ +LG+ K GF +D+
Sbjct: 336 TGMCLQKLGLVPEKHKGFRTFDI 358
>YJM3_YEAST (P47018) Hypothetical 53.5 kDa protein in GCD14-POS18
intergenic region
Length = 478
Score = 36.2 bits (82), Expect = 0.23
Identities = 22/98 (22%), Positives = 47/98 (47%)
Query: 53 DDTTQDDVHMTSYNISSTSDKNIEHKVLPIENKEQMQDETEKETEQDEDDFREGEGEEQE 112
DD + + N+S T K +E K + QDE +E++++++ ++ G+E+E
Sbjct: 60 DDIFEFLEELEKSNLSLTDKKGVEKKAPSESVNNKAQDEKVEESKENKNSEQDAHGKEKE 119
Query: 113 NKSPIVVRLTPEQMAQRQDTELKHIVFGIAASSNLWNT 150
+ E+ + ++ E + IA+ SN W++
Sbjct: 120 PQQQEKEEEEEEEEEEEEEEEETPLHDPIASISNWWSS 157
>NUCL_MESAU (P08199) Nucleolin (Protein C23)
Length = 713
Score = 36.2 bits (82), Expect = 0.23
Identities = 38/160 (23%), Positives = 69/160 (42%), Gaps = 23/160 (14%)
Query: 53 DDTTQDDVHMTSYNISSTSDKNIEHKVLPIENK---------EQMQDETEKETEQDEDDF 103
DD+ +++ + I+ K KV+P++ K E+ ++ E++ E++ED+
Sbjct: 207 DDSEEEE----AMEITPAKGKKAPAKVVPVKAKNVAEEDDDDEEEDEDEEEDEEEEEDEE 262
Query: 104 REGEGEEQENKSPIVVRLTPEQMAQRQDTEL-KHIVFGIAASS--NLW----NTRKEYIK 156
E E EE+E P + E Q++ E K V G +++ NL+ N K +
Sbjct: 263 EEEEEEEEEPVKPAPGKRKKEMTKQKEVPEAKKQKVEGSESTTPFNLFIGNLNPNKSVAE 322
Query: 157 I---WWRPKQTRGVVWLDQRVSTQRNEGLPDIRISDDTSK 193
+ P + +D R T R G D ++D K
Sbjct: 323 LKVAISEPFAKNDLAVVDVRTGTNRKFGYVDFESAEDLEK 362
Score = 32.0 bits (71), Expect = 4.3
Identities = 17/60 (28%), Positives = 28/60 (46%)
Query: 53 DDTTQDDVHMTSYNISSTSDKNIEHKVLPIENKEQMQDETEKETEQDEDDFREGEGEEQE 112
DD+ +D+ K + KV + +DE E E E++ED+ E + EE+E
Sbjct: 154 DDSDEDEEDEEEDEFEPPVVKGKQGKVAAAAPASEDEDEEEDEEEEEEDEEEEDDSEEEE 213
>THYP_BOVIN (P08814) Parathymosin
Length = 101
Score = 35.8 bits (81), Expect = 0.30
Identities = 23/66 (34%), Positives = 36/66 (53%), Gaps = 8/66 (12%)
Query: 76 EHKVLPIENKEQMQDETEKET-----EQDEDDFREGEGEEQENKSPIVVRLTPEQ---MA 127
E K +E +E +E E+ET E+D+ D + E EE+E++ P +VR E+
Sbjct: 31 ERKKEVVEEEENGAEEEEEETAEDGEEEDDGDEEDEEEEEEEDEGPALVRAAEEEDEADP 90
Query: 128 QRQDTE 133
+RQ TE
Sbjct: 91 KRQKTE 96
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.322 0.136 0.416
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 63,929,611
Number of Sequences: 164201
Number of extensions: 2679329
Number of successful extensions: 12689
Number of sequences better than 10.0: 165
Number of HSP's better than 10.0 without gapping: 76
Number of HSP's successfully gapped in prelim test: 95
Number of HSP's that attempted gapping in prelim test: 11543
Number of HSP's gapped (non-prelim): 609
length of query: 548
length of database: 59,974,054
effective HSP length: 115
effective length of query: 433
effective length of database: 41,090,939
effective search space: 17792376587
effective search space used: 17792376587
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 68 (30.8 bits)
Medicago: description of AC135230.10