BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC134521.7 + phase: 0
(183 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
NTRC_RHOCA (P09432) Nitrogen regulation protein ntrC 32 0.83
KAPR_TRIAT (Q86ZN7) cAMP-dependent protein kinase regulatory sub... 30 2.4
NGK7_SCHPO (Q9USL4) Putative nucleoporin C18B5.07c 30 3.1
NAB2_YEAST (P32505) Nuclear polyadenylated RNA-binding protein NAB2 30 3.1
AREA_PENCH (Q01582) Nitrogen regulatory protein areA (Nitrogen r... 30 4.1
PRF1_LYCES (Q00451) 36.4 kDa proline-rich protein 29 5.4
MGA2_YEAST (P40578) MGA2 protein 29 5.4
BAG_STRAG (P27951) IgA FC receptor precursor (Beta antigen) (B a... 29 5.4
YPS7_CAEEL (Q20085) Putative serine/threonine-protein kinase F35... 29 7.0
SYL_FUSNN (Q8RIQ3) Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine-... 29 7.0
SYLC_NEUCR (P10857) Leucyl-tRNA synthetase, cytoplasmic (EC 6.1.... 29 7.0
ARLY_SULTO (Q970U9) Argininosuccinate lyase (EC 4.3.2.1) (Argino... 29 7.0
GDA1_WHEAT (P04721) Alpha/beta-gliadin A-I precursor (Prolamin) 28 9.1
>NTRC_RHOCA (P09432) Nitrogen regulation protein ntrC
Length = 457
Score = 32.0 bits (71), Expect = 0.83
Identities = 39/150 (26%), Positives = 59/150 (39%), Gaps = 24/150 (16%)
Query: 27 PFSQPNTSKQLNYQFT-TLKPQASAKGFSNTRPPSTNKAKDDVPIKKNPNNKNDDDDIPK 85
PF P+ K+ T + Q K +RP T D+P+
Sbjct: 104 PFDLPDLMKRAARALELTRRAQVVPKVIETSRPEGT-----DLPLVGRT--------AAM 150
Query: 86 EVMYRIIGRILFSTLVPMALGLSFLHLYGELKDRHIFNAPLWMPFVTTLV--FFGASGLG 143
+ +YR++ R++ + L M +G S K H F+ +PFV GA G
Sbjct: 151 QALYRLVARVMNADLPVMIMGESGTGKSLIAKAIHDFSDRRTLPFVVAQAADLLGADG-- 208
Query: 144 IAYGVLSTSLDAEREGSLLGFEEVEKNWDE 173
+SL A R+G L+ F+EV DE
Sbjct: 209 ------PSSLLARRQGRLVVFDEVGDYDDE 232
>KAPR_TRIAT (Q86ZN7) cAMP-dependent protein kinase regulatory
subunit (PKA regulatory subunit)
Length = 462
Score = 30.4 bits (67), Expect = 2.4
Identities = 23/72 (31%), Positives = 32/72 (43%), Gaps = 18/72 (25%)
Query: 29 SQPNTSKQLNYQFTTLKPQASAKGFSNTRPPSTNKAKDDVPIKKNPNNKNDDDDIPKEVM 88
+Q N S++ + +LKP SA GF N PP T+K + V + +
Sbjct: 155 AQYNFSRRTSVSAESLKP--SADGFDNWTPPYTDKTPEQV----------------ERLK 196
Query: 89 YRIIGRILFSTL 100
Y I G LFS L
Sbjct: 197 YAIEGNFLFSHL 208
>NGK7_SCHPO (Q9USL4) Putative nucleoporin C18B5.07c
Length = 565
Score = 30.0 bits (66), Expect = 3.1
Identities = 19/54 (35%), Positives = 24/54 (44%), Gaps = 3/54 (5%)
Query: 24 QKFPFSQPNTSKQLNYQFTTLKPQASAKGFS---NTRPPSTNKAKDDVPIKKNP 74
+KF F+ P +SK+L P A+A GFS T P S K P P
Sbjct: 353 KKFTFTNPLSSKKLPASSDVKPPSAAAVGFSFGTTTNPFSFAAPKSSFPTSSTP 406
>NAB2_YEAST (P32505) Nuclear polyadenylated RNA-binding protein NAB2
Length = 525
Score = 30.0 bits (66), Expect = 3.1
Identities = 16/49 (32%), Positives = 21/49 (42%)
Query: 13 QSSTQSPICKPQKFPFSQPNTSKQLNYQFTTLKPQASAKGFSNTRPPST 61
Q Q P +PQ+ P QP Q Q L+PQ + T P+T
Sbjct: 130 QQPQQQPQQQPQQQPQQQPQQQPQQQPQLQPLQPQLGTQNAMQTDAPAT 178
>AREA_PENCH (Q01582) Nitrogen regulatory protein areA (Nitrogen
regulator nre)
Length = 725
Score = 29.6 bits (65), Expect = 4.1
Identities = 28/109 (25%), Positives = 45/109 (40%), Gaps = 17/109 (15%)
Query: 2 KTLVFASNPILQSSTQSPICKPQKFPFSQPNTSKQLNYQFT-TLKPQASAKGFSNTRPPS 60
+++ F+ P +S TQ I P Q N S L ++ + S G + T PP+
Sbjct: 260 QSIFFSDAPSAESHTQRRI--PNYIQQRQSNLSASLQPRYMYNMSNGESHPGSAVTGPPT 317
Query: 61 TNKAKDDVPIKKNPNNKNDDDDIPKEVMYRIIGRILFSTLVPMALGLSF 109
TN + VP NP+ +++G FST P + +F
Sbjct: 318 TNMSGFSVPQHVNPS--------------QVLGHGEFSTTAPASSMFTF 352
>PRF1_LYCES (Q00451) 36.4 kDa proline-rich protein
Length = 346
Score = 29.3 bits (64), Expect = 5.4
Identities = 23/68 (33%), Positives = 28/68 (40%), Gaps = 12/68 (17%)
Query: 15 STQSPICKPQKFP--------FSQPNTSKQLNYQFTTLKPQASAKGFSNTRPPSTNKAKD 66
STQ P KP P P+T KQ Y +KP + K + +PPST K
Sbjct: 30 STQPPHVKPPSTPKHPKDPPHVKPPSTPKQPPY----VKPPTTPKHPPHVKPPSTPKHPK 85
Query: 67 DVPIKKNP 74
P K P
Sbjct: 86 HPPQKPCP 93
>MGA2_YEAST (P40578) MGA2 protein
Length = 1113
Score = 29.3 bits (64), Expect = 5.4
Identities = 19/68 (27%), Positives = 37/68 (53%), Gaps = 8/68 (11%)
Query: 58 PPSTNKAKDDVPIKKNPNNKNDDDDIPKEVMYRIIGRILFS-------TLVPMALGLSFL 110
PP+ + V I + NN+N++DD+P+E+ + +F+ L+ +AL + L
Sbjct: 584 PPAAYAGQVFVSIT-DTNNENNNDDLPQEIEINDNKKAIFTYVDDTDRQLIELALQIVGL 642
Query: 111 HLYGELKD 118
+ G+L+D
Sbjct: 643 KMNGKLED 650
>BAG_STRAG (P27951) IgA FC receptor precursor (Beta antigen) (B
antigen)
Length = 1164
Score = 29.3 bits (64), Expect = 5.4
Identities = 14/52 (26%), Positives = 27/52 (51%)
Query: 32 NTSKQLNYQFTTLKPQASAKGFSNTRPPSTNKAKDDVPIKKNPNNKNDDDDI 83
N K+LN+Q + ++ A KG +N S K +D+ + +K +D ++
Sbjct: 193 NIDKELNHQKSQVEKMAEQKGITNEDKDSMLKKIEDIRKQAQQADKKEDAEV 244
>YPS7_CAEEL (Q20085) Putative serine/threonine-protein kinase
F35H8.7 (EC 2.7.1.37)
Length = 468
Score = 28.9 bits (63), Expect = 7.0
Identities = 23/67 (34%), Positives = 33/67 (48%), Gaps = 7/67 (10%)
Query: 32 NTSKQLNYQFTTLKPQASAKGFSNTRPPSTNKAKDDVP-IKKNPNNKNDDDDIPKEVMYR 90
NTS++L + TT K Q++ K RPP NKA+ +P I + D I +
Sbjct: 33 NTSRKL--EVTTKKNQSNNK----KRPPPINKARKSLPSIFRRAEENKDSAQIITPTGSK 86
Query: 91 IIGRILF 97
IIG L+
Sbjct: 87 IIGSPLY 93
>SYL_FUSNN (Q8RIQ3) Leucyl-tRNA synthetase (EC 6.1.1.4)
(Leucine--tRNA ligase) (LeuRS)
Length = 859
Score = 28.9 bits (63), Expect = 7.0
Identities = 8/17 (47%), Positives = 13/17 (76%)
Query: 164 FEEVEKNWDEMWQQENV 180
F+E+EK W E W ++N+
Sbjct: 6 FKEIEKKWQERWSKDNI 22
>SYLC_NEUCR (P10857) Leucyl-tRNA synthetase, cytoplasmic (EC
6.1.1.4) (Leucine--tRNA ligase) (LeuRS)
Length = 1123
Score = 28.9 bits (63), Expect = 7.0
Identities = 16/48 (33%), Positives = 24/48 (49%), Gaps = 6/48 (12%)
Query: 139 ASGLGIAYGVLSTSLDAEREGSLLGFE------EVEKNWDEMWQQENV 180
A +A GV + S+ A + L G E E+EK + + W+QE V
Sbjct: 2 ADTAAVAKGVENLSVSASKTKELKGTEKRDTLIEIEKRYQQKWEQEGV 49
>ARLY_SULTO (Q970U9) Argininosuccinate lyase (EC 4.3.2.1)
(Arginosuccinase) (ASAL)
Length = 446
Score = 28.9 bits (63), Expect = 7.0
Identities = 22/75 (29%), Positives = 33/75 (43%), Gaps = 8/75 (10%)
Query: 97 FSTLVPMALGLSFLHLYGELKDRHIFNAPLWMPFVTTLVFFGASGLGIAYGV-LSTSLDA 155
F P L FL++ EL +W ++L+ S LG V + LD
Sbjct: 146 FQPAQPSTLAHYFLYIEDELDT-------IWNYIYSSLLLVNRSPLGSGAIVGTNVKLDR 198
Query: 156 EREGSLLGFEEVEKN 170
+RE LLGF+++ N
Sbjct: 199 KREAELLGFDDIIYN 213
>GDA1_WHEAT (P04721) Alpha/beta-gliadin A-I precursor (Prolamin)
Length = 262
Score = 28.5 bits (62), Expect = 9.1
Identities = 22/89 (24%), Positives = 35/89 (38%), Gaps = 5/89 (5%)
Query: 17 QSPICKPQKFPFSQPNTSKQLNYQFTTLKPQASAKGFSNTRP---PSTNKAKDDVPIKKN 73
Q P +PQ FP QP QL P + + F +P P ++ PI +
Sbjct: 60 QQPYPQPQPFPSQQPYL--QLQPFLQPQLPYSQPQPFRPQQPYPQPQPQYSQPQQPISQQ 117
Query: 74 PNNKNDDDDIPKEVMYRIIGRILFSTLVP 102
+ ++ +II +IL L+P
Sbjct: 118 QQQQQQQQQQQQQQQQQIIQQILQQQLIP 146
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.316 0.134 0.399
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,762,098
Number of Sequences: 164201
Number of extensions: 973044
Number of successful extensions: 2596
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 2590
Number of HSP's gapped (non-prelim): 15
length of query: 183
length of database: 59,974,054
effective HSP length: 103
effective length of query: 80
effective length of database: 43,061,351
effective search space: 3444908080
effective search space used: 3444908080
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (28.5 bits)
Medicago: description of AC134521.7