BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC133864.7 - phase: 0 
         (563 letters)

Database: sprot 
           164,201 sequences; 59,974,054 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

BCSC_PSEFL (P58937) Cellulose synthase operon protein C precursor      33  2.6
BTPA_SYNY3 (P72966) Photosystem I biogenesis protein btpA              31  7.5
VAV2_HUMAN (P52735) Vav-2 protein                                      31  9.8
PDI_DROME (P54399) Protein disulfide-isomerase precursor (EC 5.3...    31  9.8
CRUP_STRCO (Q9ACU1) Bifunctional crtB/uppS protein [Includes: Ph...    31  9.8
BPI_HUMAN (P17213) Bactericidal permeability-increasing protein ...    31  9.8

>BCSC_PSEFL (P58937) Cellulose synthase operon protein C precursor
          Length = 1279

 Score = 32.7 bits (73), Expect = 2.6
 Identities = 29/103 (28%), Positives = 47/103 (45%), Gaps = 10/103 (9%)

Query: 360 YDEVINNERIQRPELLTARSNMTYHQRKMAGLCPLNVMEVMRLLKALGAPKDARIYWAGG 419
           YD++I   R+++ + L  ++++      +A    L+     R   ALG    AR+Y A G
Sbjct: 680 YDDLIYLYRVKQADALREKNDL------VAAYDMLSPALAQRPNDALGVGALARMYAASG 733

Query: 420 KPLGGKEALLPLIQEFPNFYNKE----DLALPGELQPFVRKAS 458
                 E   PLIQ+ PN    +    D+AL G  +   + AS
Sbjct: 734 NGKKAMELYAPLIQQNPNNARLQLGLADIALKGNDRGLAQSAS 776


>BTPA_SYNY3 (P72966) Photosystem I biogenesis protein btpA
          Length = 287

 Score = 31.2 bits (69), Expect = 7.5
 Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 4/86 (4%)

Query: 178 MVVVSGGMNQQRNQIVDAVVIARILGAALVVPVLQVNVIWGDESEF-GDIFDLEHFKRVL 236
           +VV   G+N  RN    A+ IA  +GA  +   +   V+  D+    G+  +L  ++R L
Sbjct: 87  LVVAPVGINVLRNDAHSALAIASCVGAKFIRVNVLTGVMATDQGLIEGNAHELLRYRREL 146

Query: 237 ANDVRVVSALPSTHIMTRPVEGRPPL 262
           ++DV +++ +   H   RP+ G P L
Sbjct: 147 SSDVAILADVLVKH--ARPL-GTPNL 169


>VAV2_HUMAN (P52735) Vav-2 protein
          Length = 878

 Score = 30.8 bits (68), Expect = 9.8
 Identities = 18/73 (24%), Positives = 33/73 (44%), Gaps = 10/73 (13%)

Query: 247 PSTHIMTRPVEGRPPLHATPS---------WIRARYLRRLNREGVLLLRGLDSRLSKDLP 297
           PS+ +   PV+GRPP+   PS         W  A  + R   + +L      + L ++ P
Sbjct: 643 PSSSVKPCPVDGRPPISRPPSREIDYTAYPWF-AGNMERQQTDNLLKSHASGTYLIRERP 701

Query: 298 SDLQKLRCKVAFN 310
           ++ ++    + FN
Sbjct: 702 AEAERFAISIKFN 714


>PDI_DROME (P54399) Protein disulfide-isomerase precursor (EC
           5.3.4.1) (PDI)
          Length = 496

 Score = 30.8 bits (68), Expect = 9.8
 Identities = 30/111 (27%), Positives = 45/111 (40%), Gaps = 19/111 (17%)

Query: 450 LQPFVRKASLMAAIDYIVSEKSDVFMPSHGGNMGRAIQGHRAFT-----GH-KKYITPNK 503
           L+ F +  SL   +D+     S +F        G +I+ H  F      GH +KY+ P K
Sbjct: 225 LKKFAQVQSLPLIVDFNHESASKIF--------GGSIKSHLLFFVSREGGHIEKYVDPLK 276

Query: 504 RHMLPY-----FLNSSLSEEEFNRIIKELHQDSLGQPELRTNKNGRDVTKY 549
                Y     F+  S  EE+  RI +    +    P +R  K   D+ KY
Sbjct: 277 EIAKKYRDDILFVTISSDEEDHTRIFEFFGMNKEEVPTIRLIKLEEDMAKY 327


>CRUP_STRCO (Q9ACU1) Bifunctional crtB/uppS protein [Includes:
           Phytoene synthase (EC 2.5.1.-); Undecaprenyl
           pyrophosphate synthetase 3 (EC 2.5.1.31) (UPP synthetase
           3) (Di-trans-poly-cis-decaprenylcistransferase 3)
           (Undecaprenyl diphosphate synthase 3) (U
          Length = 564

 Score = 30.8 bits (68), Expect = 9.8
 Identities = 24/63 (38%), Positives = 32/63 (50%), Gaps = 4/63 (6%)

Query: 253 TRPVEGRPPLHATPSWIRARYLRRLNREGVLLLRGLDSRLSKDLPSDLQKLRCKVAFNAL 312
           T PVE RP L+A  SW  + Y  R+  EG   L G + RL++     L  LR   + + L
Sbjct: 62  TLPVETRPSLYAIASW--SAYTDRIIDEGP--LEGREERLAQWSADTLADLRAGHSSHPL 117

Query: 313 RFA 315
           R A
Sbjct: 118 RRA 120


>BPI_HUMAN (P17213) Bactericidal permeability-increasing protein
           precursor (BPI) (CAP 57)
          Length = 483

 Score = 30.8 bits (68), Expect = 9.8
 Identities = 31/124 (25%), Positives = 55/124 (44%), Gaps = 3/124 (2%)

Query: 12  SYISVPSQIINSISSSSLQSLIDSPKKSSKTTIFTRKSTLWFLALFLVGFFGMFKFGFNP 71
           S IS+   +    S S+    I    K+ K   F + S  + L++  +      K G NP
Sbjct: 93  SQISMVPNVGLKFSISNANIKISGKWKAQKR--FLKMSGNFDLSIEGMSISADLKLGSNP 150

Query: 72  DTPFPQKPCSTTLQKF-SISNHHSFSKLGFGSVLLQKERKTSLKNDHNDEFLQHGSEFLV 130
            +  P   CS+      S+  H S SK+G+   L  K+ +++L+N  N +  +  +  + 
Sbjct: 151 TSGKPTITCSSCSSHINSVHVHISKSKVGWLIQLFHKKIESALRNKMNSQVCEKVTNSVS 210

Query: 131 SHVQ 134
           S +Q
Sbjct: 211 SKLQ 214


  Database: sprot
    Posted date:  Nov 25, 2004 10:54 AM
  Number of letters in database: 59,974,054
  Number of sequences in database:  164,201
  
Lambda     K      H
   0.320    0.136    0.404 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 67,505,977
Number of Sequences: 164201
Number of extensions: 2929844
Number of successful extensions: 6690
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 6690
Number of HSP's gapped (non-prelim): 6
length of query: 563
length of database: 59,974,054
effective HSP length: 115
effective length of query: 448
effective length of database: 41,090,939
effective search space: 18408740672
effective search space used: 18408740672
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 68 (30.8 bits)