BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC133780.10 - phase: 0
(172 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UBF1_HUMAN (P17480) Nucleolar transcription factor 1 (Upstream b... 68 9e-12
UBF1_RAT (P25977) Nucleolar transcription factor 1 (Upstream bin... 68 1e-11
NUCL_HUMAN (P19338) Nucleolin (Protein C23) 66 5e-11
UBF2_XENLA (P25980) Nucleolar transcription factor 2 (Upstream b... 64 1e-10
SIS2_YEAST (P36024) SIS2 protein (Halotolerance protein HAL3) 62 7e-10
VHS3_YEAST (Q08438) Protein VHS3 (Viable in a HAL3 SIT4 backgrou... 62 9e-10
GARP_PLAFF (P13816) Glutamic acid-rich protein precursor 61 1e-09
UBF1_MOUSE (P25976) Nucleolar transcription factor 1 (Upstream b... 61 1e-09
YKK5_YEAST (P34250) Hypothetical 125.6 kDa protein in AAT1-GFA1 ... 60 2e-09
NMD2_YEAST (P38798) Nonsense-mediated mRNA decay protein 2 (Up-f... 60 2e-09
UBF1_XENLA (P25979) Nucleolar transcription factor 1 (Upstream b... 59 7e-09
NUCL_CHICK (P15771) Nucleolin (Protein C23) 58 9e-09
SPBP_RAT (P08723) Prostatic spermine-binding protein precursor (... 58 1e-08
NUCL_RAT (P13383) Nucleolin (Protein C23) 57 2e-08
CAQ1_RANES (P31231) Calsequestrin, skeletal muscle isoform precu... 57 2e-08
YHT1_YEAST (P38835) Hypothetical 95.1 kDa protein in ACT5-YCK1 i... 57 2e-08
NAB3_YEAST (P38996) Nuclear polyadenylated RNA-binding protein 3 57 2e-08
NUCL_MOUSE (P09405) Nucleolin (Protein C23) 55 6e-08
IFH1_YEAST (P39520) IFH1 protein (RRP3 protein) 55 6e-08
BA2B_CHICK (Q9DE13) Bromodomain adjacent to zinc finger domain 2... 55 8e-08
>UBF1_HUMAN (P17480) Nucleolar transcription factor 1 (Upstream
binding factor 1) (UBF-1) (Autoantigen NOR-90)
Length = 764
Score = 68.2 bits (165), Expect = 9e-12
Identities = 38/114 (33%), Positives = 64/114 (55%), Gaps = 4/114 (3%)
Query: 27 HLPNKNPKLTSTTTVDQETELPTTVNSSSDAVPNNEPENNTDDDDEDDEDEENSDEEPVV 86
++ NK +T + ++ TT+ S S++ ++E + + +D+DE++ED+EN D
Sbjct: 648 YISNKRKSMTKLRGPNPKSSR-TTLQSKSESEEDDEEDEDDEDEDEEEEDDENGDSSEDG 706
Query: 87 DRKGKGIMRDDKGKGKMIEEEDED-DDDSDDSDDSDDDSDGNVSGSDS--DFSD 137
+ D+ G EE+DED DDD DD +D D++S+G+ S S S D SD
Sbjct: 707 GDSSESSSEDESEDGDENEEDDEDEDDDEDDDEDEDNESEGSSSSSSSSGDSSD 760
Score = 41.2 bits (95), Expect = 0.001
Identities = 28/113 (24%), Positives = 49/113 (42%), Gaps = 24/113 (21%)
Query: 62 EPENNTDDDDEDDEDEENSDEEPVVDRKGKGIMRDDKGKGKMIEEEDEDDDDS--DDSDD 119
+ ++ +++DDE+DED+E+ DEE EED+++ DS D D
Sbjct: 672 QSKSESEEDDEEDEDDEDEDEE----------------------EEDDENGDSSEDGGDS 709
Query: 120 SDDDSDGNVSGSDSDFSDDPLAEVDLDNILPSRTRRRTAQSGVRISGGTPNAD 172
S+ S+ D + DD + D D+ + S SG + ++D
Sbjct: 710 SESSSEDESEDGDENEEDDEDEDDDEDDDEDEDNESEGSSSSSSSSGDSSDSD 762
Score = 38.1 bits (87), Expect = 0.010
Identities = 27/119 (22%), Positives = 47/119 (38%), Gaps = 29/119 (24%)
Query: 16 TKRKPDQEETHHLPNKNPKLTSTTTVDQETELPTTVNSSSDAVPNNEPENNTDDDDEDDE 75
++ + D EE +++ + D + + SSS+ + EN DD+DEDD+
Sbjct: 675 SESEEDDEEDEDDEDEDEEEEDDENGDSSEDGGDSSESSSEDESEDGDENEEDDEDEDDD 734
Query: 76 DEENSDEEPVVDRKGKGIMRDDKGKGKMIEEEDEDDDDSDDSDDSDDDSDGNVSGSDSD 134
E++DED+D+ + S S G+ S SDS+
Sbjct: 735 -----------------------------EDDDEDEDNESEGSSSSSSSSGDSSDSDSN 764
>UBF1_RAT (P25977) Nucleolar transcription factor 1 (Upstream
binding factor 1) (UBF-1)
Length = 764
Score = 67.8 bits (164), Expect = 1e-11
Identities = 37/114 (32%), Positives = 65/114 (56%), Gaps = 4/114 (3%)
Query: 27 HLPNKNPKLTSTTTVDQETELPTTVNSSSDAVPNNEPENNTDDDDEDDEDEENSDEEPVV 86
++ NK +T + ++ TT+ S S++ +++ E++ DDD+E++ED+EN D
Sbjct: 648 YISNKRKNMTKLRGPNPKSSR-TTLQSKSESEEDDDEEDDDDDDEEEEEDDENGDSSEDG 706
Query: 87 DRKGKGIMRDDKGKGKMIEEEDED-DDDSDDSDDSDDDSDGNVSGSDS--DFSD 137
+ D+ G E++D+D DDD DD +D D++S+G+ S S S D SD
Sbjct: 707 GDSSESSSEDESEDGDENEDDDDDEDDDEDDDEDEDNESEGSSSSSSSSGDSSD 760
>NUCL_HUMAN (P19338) Nucleolin (Protein C23)
Length = 706
Score = 65.9 bits (159), Expect = 5e-11
Identities = 39/135 (28%), Positives = 66/135 (48%), Gaps = 10/135 (7%)
Query: 18 RKPDQEETHHLPNKNPKLTSTTTVDQETELPTTVNSSSDAVPNNEPENNTDD-DDEDDED 76
+K D +E ++ + + E E+ ++ A P +E E++ DD DDEDD+D
Sbjct: 140 KKEDSDEEEDDDSEEDEEDDEDEDEDEDEIEPAAMKAAAAAPASEDEDDEDDEDDEDDDD 199
Query: 77 EENSDEE----PVVDRKGKGIMRDDKGKGKMI-----EEEDEDDDDSDDSDDSDDDSDGN 127
+E D E KGK + K K + EEED++D+D DD +D +DD D +
Sbjct: 200 DEEDDSEEEAMETTPAKGKKAAKVVPVKAKNVAEDEDEEEDDEDEDDDDDEDDEDDDDED 259
Query: 128 VSGSDSDFSDDPLAE 142
+ + ++P+ E
Sbjct: 260 DEEEEEEEEEEPVKE 274
Score = 48.9 bits (115), Expect = 6e-06
Identities = 28/102 (27%), Positives = 42/102 (40%), Gaps = 7/102 (6%)
Query: 53 SSSDAVPNNEPENNTDDDDEDDEDEENSDEEPVVDRKGKGIMRDDKGKGKMIEEEDEDDD 112
+ +A + E DD +ED+ED+E+ DE+ D M K ED+D
Sbjct: 135 NGKNAKKEDSDEEEDDDSEEDEEDDEDEDEDE--DEIEPAAM-----KAAAAAPASEDED 187
Query: 113 DSDDSDDSDDDSDGNVSGSDSDFSDDPLAEVDLDNILPSRTR 154
D DD DD DDD D + P ++P + +
Sbjct: 188 DEDDEDDEDDDDDEEDDSEEEAMETTPAKGKKAAKVVPVKAK 229
Score = 39.7 bits (91), Expect = 0.003
Identities = 22/82 (26%), Positives = 38/82 (45%), Gaps = 7/82 (8%)
Query: 21 DQEETHHLPNKNPKLTSTTTVDQETELPTTVNSSSDAVPNNEPENNTDDDDEDDEDEENS 80
++E P K K V + N + D + E+ DDDDEDDED+++
Sbjct: 206 EEEAMETTPAKGKKAAKVVPVKAK-------NVAEDEDEEEDDEDEDDDDDEDDEDDDDE 258
Query: 81 DEEPVVDRKGKGIMRDDKGKGK 102
D+E + + + +++ GK K
Sbjct: 259 DDEEEEEEEEEEPVKEAPGKRK 280
Score = 34.7 bits (78), Expect = 0.11
Identities = 22/89 (24%), Positives = 42/89 (46%), Gaps = 9/89 (10%)
Query: 3 EPETNNHEEPTFPTKRKPDQEETHHLPNKNPKLTSTTTVDQETELPTTVNSSSDAVPNNE 62
+ E ++ EE T ++ +P K + +++ E D + +
Sbjct: 199 DDEEDDSEEEAMETTPAKGKKAAKVVPVKAKNVAEDEDEEEDDE-------DEDDDDDED 251
Query: 63 PENNTDDDDEDDEDEENSDEEPVVDRKGK 91
E++ D+DDE++E+EE +EEPV + GK
Sbjct: 252 DEDDDDEDDEEEEEEE--EEEPVKEAPGK 278
Score = 33.9 bits (76), Expect = 0.19
Identities = 13/35 (37%), Positives = 20/35 (57%)
Query: 91 KGIMRDDKGKGKMIEEEDEDDDDSDDSDDSDDDSD 125
KG K + +EE++DD + D+ DD D+D D
Sbjct: 131 KGAKNGKNAKKEDSDEEEDDDSEEDEEDDEDEDED 165
Score = 33.1 bits (74), Expect = 0.33
Identities = 13/45 (28%), Positives = 24/45 (52%)
Query: 88 RKGKGIMRDDKGKGKMIEEEDEDDDDSDDSDDSDDDSDGNVSGSD 132
+KG I GK ++ED D+++ DDS++ ++D + D
Sbjct: 123 KKGAAIPAKGAKNGKNAKKEDSDEEEDDDSEEDEEDDEDEDEDED 167
Score = 29.6 bits (65), Expect = 3.6
Identities = 13/37 (35%), Positives = 24/37 (64%), Gaps = 2/37 (5%)
Query: 57 AVPNNEPENNTDDDD--EDDEDEENSDEEPVVDRKGK 91
A P E E +++D++ ED+ED+ + +E + +KGK
Sbjct: 17 APPPKEVEEDSEDEEMSEDEEDDSSGEEVVIPQKKGK 53
Score = 28.5 bits (62), Expect = 8.0
Identities = 18/69 (26%), Positives = 31/69 (44%), Gaps = 3/69 (4%)
Query: 90 GKGIMRDDKGKGKMIEEEDEDDDDSDDSDDSDDDSDGNVSGSDSDFSDDPLAEVDLDNIL 149
GK ++ KG I + + + +DSD++ D + S+ D DD + D D I
Sbjct: 114 GKALVATPGKKGAAIPAKGAKNGKNAKKEDSDEEEDDD---SEEDEEDDEDEDEDEDEIE 170
Query: 150 PSRTRRRTA 158
P+ + A
Sbjct: 171 PAAMKAAAA 179
>UBF2_XENLA (P25980) Nucleolar transcription factor 2 (Upstream
binding factor-2) (UBF-2) (xUBF-2)
Length = 701
Score = 64.3 bits (155), Expect = 1e-10
Identities = 39/111 (35%), Positives = 60/111 (53%), Gaps = 5/111 (4%)
Query: 30 NKNPKLTSTTTVDQETELPTTVNSSSDAVPNNEP-ENNTDDDDEDDEDEENSDEEPVVDR 88
N N + ++T ++ + S SD ++E E+ DDDD+DDED+E+S E+ D
Sbjct: 589 NTNKRKSTTKIQAPSSKSKLVIQSKSDDDEDDEDDEDEEDDDDDDDEDKEDSSEDG--DS 646
Query: 89 KGKGIMRDDKGKGKMIEEEDEDDDDSDDSDDSDDDSDGNVSGSDS--DFSD 137
D + + +EEDE+DDD D+ +D DD+ G+ S S S D SD
Sbjct: 647 SDSSSDEDSEEGEENEDEEDEEDDDEDNEEDDDDNESGSSSSSSSSADSSD 697
Score = 61.6 bits (148), Expect = 9e-10
Identities = 30/109 (27%), Positives = 58/109 (52%), Gaps = 5/109 (4%)
Query: 34 KLTSTTTVDQETELPTTVNSSSDAVPNNEPENNTDDDDEDDEDEENSDEEPVVDRKGKGI 93
K +T T++ + S + + ++ D+DDED+ED+++ D+E D G
Sbjct: 586 KEQNTNKRKSTTKIQAPSSKSKLVIQSKSDDDEDDEDDEDEEDDDDDDDEDKEDSSEDGD 645
Query: 94 MRD-----DKGKGKMIEEEDEDDDDSDDSDDSDDDSDGNVSGSDSDFSD 137
D D +G+ E+E++++DD +D+++ DDD++ S S S +D
Sbjct: 646 SSDSSSDEDSEEGEENEDEEDEEDDDEDNEEDDDDNESGSSSSSSSSAD 694
Score = 48.5 bits (114), Expect = 7e-06
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 17/77 (22%)
Query: 62 EPENNTDDDDEDDEDEENSDEEPVVDRKGKGIMRDDKGKGKMIEEEDEDDDDSDDSDDSD 121
+ +++ D+DDEDDEDEE+ D++ DD+ K E+ +D DS DS +
Sbjct: 611 QSKSDDDEDDEDDEDEEDDDDD------------DDEDK-----EDSSEDGDSSDSSSDE 653
Query: 122 DDSDGNVSGSDSDFSDD 138
D +G + + D DD
Sbjct: 654 DSEEGEENEDEEDEEDD 670
Score = 40.4 bits (93), Expect = 0.002
Identities = 22/82 (26%), Positives = 38/82 (45%), Gaps = 9/82 (10%)
Query: 75 EDEENSDEEPVVDRKGKGIMRDDKGKGKMI---------EEEDEDDDDSDDSDDSDDDSD 125
+D E+ RK ++ K K++ ++ED++D++ DD DD +D D
Sbjct: 580 QDRAAYKEQNTNKRKSTTKIQAPSSKSKLVIQSKSDDDEDDEDDEDEEDDDDDDDEDKED 639
Query: 126 GNVSGSDSDFSDDPLAEVDLDN 147
+ G SD S D +E +N
Sbjct: 640 SSEDGDSSDSSSDEDSEEGEEN 661
Score = 40.0 bits (92), Expect = 0.003
Identities = 25/96 (26%), Positives = 39/96 (40%), Gaps = 19/96 (19%)
Query: 39 TTVDQETELPTTVNSSSDAVPNNEPENNTDDDDEDDEDEENSDEEPVVDRKGKGIMRDDK 98
+T D+ N P + + + D++ DE DD+
Sbjct: 578 STQDRAAYKEQNTNKRKSTTKIQAPSSKSKLVIQSKSDDDEDDE-------------DDE 624
Query: 99 GKGKMIEEEDEDDDDSDDSDDSDDDSDGNVSGSDSD 134
+EED+DDDD +D +DS +D D + S SD D
Sbjct: 625 ------DEEDDDDDDDEDKEDSSEDGDSSDSSSDED 654
>SIS2_YEAST (P36024) SIS2 protein (Halotolerance protein HAL3)
Length = 562
Score = 62.0 bits (149), Expect = 7e-10
Identities = 28/77 (36%), Positives = 46/77 (59%), Gaps = 13/77 (16%)
Query: 63 PENNTDDDDEDDEDEENSDEEPVVDRKGKGIMRDDKGKGKMIEEEDEDDDDSDDSDDSDD 122
P+NN ++DD++DE+E++ +EE +DK + +++D+DDDD DD DD DD
Sbjct: 492 PKNNEEEDDDEDEEEDDDEEEDT----------EDKNENNNDDDDDDDDDDDDDDDDDDD 541
Query: 123 DSDGNVSGSDSDFSDDP 139
D D + D D ++ P
Sbjct: 542 DDDDD---EDEDEAETP 555
Score = 48.9 bits (115), Expect = 6e-06
Identities = 26/74 (35%), Positives = 40/74 (53%), Gaps = 27/74 (36%)
Query: 60 NNEPENNTDDDDEDDED--------EENSDEEPVVDRKGKGIMRDDKGKGKMIEEEDEDD 111
NNE E++ +D++EDD++ E N+D++ DD +++D+DD
Sbjct: 494 NNEEEDDDEDEEEDDDEEEDTEDKNENNNDDD------------DD-------DDDDDDD 534
Query: 112 DDSDDSDDSDDDSD 125
DD DD DD DDD D
Sbjct: 535 DDDDDDDDDDDDED 548
Score = 43.1 bits (100), Expect = 3e-04
Identities = 19/74 (25%), Positives = 37/74 (49%), Gaps = 22/74 (29%)
Query: 52 NSSSDAVPNNEPENNTDDDDEDDEDEENSDEEPVVDRKGKGIMRDDKGKGKMIEEEDEDD 111
+ D +++ E +T+D +E++ D+++ D+ +++D+DD
Sbjct: 499 DDDEDEEEDDDEEEDTEDKNENNNDDDDDDD----------------------DDDDDDD 536
Query: 112 DDSDDSDDSDDDSD 125
DD DD DD D+D D
Sbjct: 537 DDDDDDDDDDEDED 550
Score = 41.6 bits (96), Expect = 0.001
Identities = 19/49 (38%), Positives = 29/49 (58%)
Query: 99 GKGKMIEEEDEDDDDSDDSDDSDDDSDGNVSGSDSDFSDDPLAEVDLDN 147
G K EEED+D+D+ +D D+ +D D N + +D D DD + D D+
Sbjct: 490 GYPKNNEEEDDDEDEEEDDDEEEDTEDKNENNNDDDDDDDDDDDDDDDD 538
Score = 37.7 bits (86), Expect = 0.013
Identities = 21/76 (27%), Positives = 36/76 (46%), Gaps = 18/76 (23%)
Query: 7 NNHEEPTFPTKRKPDQEETHHLPNKNPKLTSTTTVDQETELPTTVNSSSDAVPNNEPENN 66
NN EE + + D EE ++TE N+ D +++ +++
Sbjct: 494 NNEEEDDDEDEEEDDDEE------------------EDTEDKNENNNDDDDDDDDDDDDD 535
Query: 67 TDDDDEDDEDEENSDE 82
DDDD+DD+D+E+ DE
Sbjct: 536 DDDDDDDDDDDEDEDE 551
Score = 37.4 bits (85), Expect = 0.017
Identities = 21/85 (24%), Positives = 34/85 (39%), Gaps = 30/85 (35%)
Query: 42 DQETELPTTVNSSSDAVPNNEPENNTDDDDEDDEDEENSDEEPVVDRKGKGIMRDDKGKG 101
+ E E + D NN +++ DDDD+DD+D
Sbjct: 502 EDEEEDDDEEEDTEDKNENNNDDDDDDDDDDDDDD------------------------- 536
Query: 102 KMIEEEDEDDDDSDDSDDSDDDSDG 126
+D+DDDD DD D+ + ++ G
Sbjct: 537 -----DDDDDDDDDDEDEDEAETPG 556
Score = 37.0 bits (84), Expect = 0.023
Identities = 20/52 (38%), Positives = 24/52 (45%), Gaps = 14/52 (26%)
Query: 105 EEEDEDD--------------DDSDDSDDSDDDSDGNVSGSDSDFSDDPLAE 142
E+E+EDD DD DD DD DDD D + D D D+ AE
Sbjct: 502 EDEEEDDDEEEDTEDKNENNNDDDDDDDDDDDDDDDDDDDDDDDDEDEDEAE 553
Score = 36.2 bits (82), Expect = 0.038
Identities = 19/85 (22%), Positives = 38/85 (44%), Gaps = 16/85 (18%)
Query: 4 PETNNHEEPTFPTKRKPDQEETHHLPNKNPKLTSTTTVDQETELPTTVNSSSDAVPNNEP 63
P+ N E+ + D+EE N+N + D +++
Sbjct: 492 PKNNEEEDDDEDEEEDDDEEEDTEDKNEN----------------NNDDDDDDDDDDDDD 535
Query: 64 ENNTDDDDEDDEDEENSDEEPVVDR 88
+++ DDDD+DDEDE+ ++ ++D+
Sbjct: 536 DDDDDDDDDDDEDEDEAETPGIIDK 560
Score = 35.0 bits (79), Expect = 0.086
Identities = 14/43 (32%), Positives = 26/43 (59%)
Query: 105 EEEDEDDDDSDDSDDSDDDSDGNVSGSDSDFSDDPLAEVDLDN 147
E++DED+++ DD ++ +D + N + D D DD + D D+
Sbjct: 498 EDDDEDEEEDDDEEEDTEDKNENNNDDDDDDDDDDDDDDDDDD 540
Score = 34.3 bits (77), Expect = 0.15
Identities = 13/53 (24%), Positives = 33/53 (61%)
Query: 42 DQETELPTTVNSSSDAVPNNEPENNTDDDDEDDEDEENSDEEPVVDRKGKGIM 94
+ + E T + + + +++ +++ DDDD+DD+D+++ D+E + + GI+
Sbjct: 506 EDDDEEEDTEDKNENNNDDDDDDDDDDDDDDDDDDDDDDDDEDEDEAETPGII 558
>VHS3_YEAST (Q08438) Protein VHS3 (Viable in a HAL3 SIT4 background
protein 3)
Length = 674
Score = 61.6 bits (148), Expect = 9e-10
Identities = 28/76 (36%), Positives = 40/76 (51%)
Query: 63 PENNTDDDDEDDEDEENSDEEPVVDRKGKGIMRDDKGKGKMIEEEDEDDDDSDDSDDSDD 122
P+ + ++E+DED + D+ D GK DD +++D+DDDD DD DD DD
Sbjct: 573 PDVSAGKEEEEDEDNDEEDDNKKNDTGGKDEDNDDDDDDDDDDDDDDDDDDDDDDDDDDD 632
Query: 123 DSDGNVSGSDSDFSDD 138
D D + D D DD
Sbjct: 633 DDDDDDDDDDDDDDDD 648
Score = 60.5 bits (145), Expect = 2e-09
Identities = 28/97 (28%), Positives = 48/97 (48%), Gaps = 21/97 (21%)
Query: 42 DQETELPTTVNSSSDAVPNNEPENNTDDDDEDDEDEENSDEEPVVDRKGKGIMRDDKGKG 101
D + E N + +N+ +++ DDDD+DD+D+++ D++
Sbjct: 586 DNDEEDDNKKNDTGGKDEDNDDDDDDDDDDDDDDDDDDDDDD------------------ 627
Query: 102 KMIEEEDEDDDDSDDSDDSDDDSDGNVSGSDSDFSDD 138
+++D+DDDD DD DD DDD D + D D D+
Sbjct: 628 ---DDDDDDDDDDDDDDDDDDDDDDDEDDEDEDEDDE 661
Score = 57.0 bits (136), Expect = 2e-08
Identities = 31/91 (34%), Positives = 43/91 (47%), Gaps = 19/91 (20%)
Query: 56 DAVPNNEPENNTDDDDEDD--------EDEENSDEEPVVDRKGKGIMRDDKGKGKMIEEE 107
D E E + D+D+EDD +DE+N D++ DD +++
Sbjct: 574 DVSAGKEEEEDEDNDEEDDNKKNDTGGKDEDNDDDDD-----------DDDDDDDDDDDD 622
Query: 108 DEDDDDSDDSDDSDDDSDGNVSGSDSDFSDD 138
D+DDDD DD DD DDD D + D D DD
Sbjct: 623 DDDDDDDDDDDDDDDDDDDDDDDDDDDDEDD 653
Score = 55.5 bits (132), Expect = 6e-08
Identities = 25/87 (28%), Positives = 44/87 (49%), Gaps = 12/87 (13%)
Query: 52 NSSSDAVPNNEPENNTDDDDEDDEDEENSDEEPVVDRKGKGIMRDDKGKGKMIEEEDEDD 111
N +D +E ++ DDDD+DD+D+++ D++ DD +++D+DD
Sbjct: 593 NKKNDTGGKDEDNDDDDDDDDDDDDDDDDDDD------------DDDDDDDDDDDDDDDD 640
Query: 112 DDSDDSDDSDDDSDGNVSGSDSDFSDD 138
DD DD DD D+D + + +D
Sbjct: 641 DDDDDDDDDDEDDEDEDEDDEGKKKED 667
Score = 48.5 bits (114), Expect = 7e-06
Identities = 26/107 (24%), Positives = 48/107 (44%), Gaps = 26/107 (24%)
Query: 19 KPDQEETHHLPNKNPKLTSTTTVDQETELPTTVNSSSDAVPNNEPENNTDDDDEDDEDEE 78
K ++E+ + + K T D++ + + D +++ +++ DDDD+DD+D++
Sbjct: 579 KEEEEDEDNDEEDDNKKNDTGGKDEDNDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD 638
Query: 79 NSDEEPVVDRKGKGIMRDDKGKGKMIEEEDEDDDDSDDSDDSDDDSD 125
+ D D+DDDD DD DD D+D D
Sbjct: 639 DDD--------------------------DDDDDDDDDEDDEDEDED 659
Score = 43.9 bits (102), Expect = 2e-04
Identities = 23/115 (20%), Positives = 51/115 (44%), Gaps = 25/115 (21%)
Query: 12 PTFPTKRKPDQEETHHLPNKNPKLTSTTTVDQETELPTTVNSSSDAVPNNEPENNTDDDD 71
P ++ +++E + + N K + + + + D +++ +++ DDDD
Sbjct: 573 PDVSAGKEEEEDEDNDEEDDNKKNDTGGKDEDNDDDDDDDDDDDDDDDDDDDDDDDDDDD 632
Query: 72 EDDEDEENSDEEPVVDRKGKGIMRDDKGKGKMIEEEDEDDDDSDDSDDSDDDSDG 126
+DD+D+++ D +D+DDDD +D +D D+D +G
Sbjct: 633 DDDDDDDDDD-------------------------DDDDDDDDEDDEDEDEDDEG 662
Score = 37.7 bits (86), Expect = 0.013
Identities = 13/48 (27%), Positives = 31/48 (64%)
Query: 52 NSSSDAVPNNEPENNTDDDDEDDEDEENSDEEPVVDRKGKGIMRDDKG 99
+ D +++ +++ DDDD+DD+D+++ +++ D +G ++DKG
Sbjct: 622 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDEDDEDEDEDDEGKKKEDKG 669
>GARP_PLAFF (P13816) Glutamic acid-rich protein precursor
Length = 678
Score = 61.2 bits (147), Expect = 1e-09
Identities = 35/142 (24%), Positives = 65/142 (45%), Gaps = 11/142 (7%)
Query: 4 PETNNH-------EEPTFPTKRKPDQEETHHLPNKNPKLTSTTTVDQETELPTTVNSSSD 56
P +NH EE ++ D+EE +K + S + E E V +
Sbjct: 522 PRRDNHKKKMAKIEEAELQKQKHVDKEEDKKEESKEVQEESKEVQEDEEE----VEEDEE 577
Query: 57 AVPNNEPENNTDDDDEDDEDEENSDEEPVVDRKGKGIMRDDKGKGKMIEEEDEDDDDSDD 116
E E ++++E++E+EE +EE D + + +D+ + E++ E+DDD +D
Sbjct: 578 EEEEEEEEEEEEEEEEEEEEEEEEEEEEDEDEEDEDDAEEDEDDAEEDEDDAEEDDDEED 637
Query: 117 SDDSDDDSDGNVSGSDSDFSDD 138
D+ DDD D + D + ++
Sbjct: 638 DDEEDDDEDEDEDEEDEEEEEE 659
Score = 55.1 bits (131), Expect = 8e-08
Identities = 32/135 (23%), Positives = 60/135 (43%), Gaps = 8/135 (5%)
Query: 2 AEPETNNH--EEPTFPTKRKPDQEETHHLPNKNPKLTSTTTVDQETELPTTVNSSSDAVP 59
AE + H +E + K QEE+ + ++ ++E E +
Sbjct: 537 AELQKQKHVDKEEDKKEESKEVQEESKEVQEDEEEVEEDEEEEEEEEEEEEEEEEEEEEE 596
Query: 60 NNEPENNTDDDDEDDEDEENSDEEPVVDRKGKGIMRDDKGKGKMIEEEDEDDDDSDDSDD 119
E E +D+DE+DED+ DE+ + + DD+ E++DE+DDD D+ +D
Sbjct: 597 EEEEEEEEEDEDEEDEDDAEEDEDDAEEDEDDAEEDDDE------EDDDEEDDDEDEDED 650
Query: 120 SDDDSDGNVSGSDSD 134
+D+ + +S+
Sbjct: 651 EEDEEEEEEEEEESE 665
Score = 39.3 bits (90), Expect = 0.005
Identities = 17/76 (22%), Positives = 42/76 (54%), Gaps = 2/76 (2%)
Query: 74 DEDEENSDEEPVVDRKGKGIMRDDKG--KGKMIEEEDEDDDDSDDSDDSDDDSDGNVSGS 131
D++E+ +E V + K + D++ + + EEE+E++++ ++ ++ +++ +
Sbjct: 546 DKEEDKKEESKEVQEESKEVQEDEEEVEEDEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 605
Query: 132 DSDFSDDPLAEVDLDN 147
D D D+ AE D D+
Sbjct: 606 DEDEEDEDDAEEDEDD 621
Score = 35.8 bits (81), Expect = 0.050
Identities = 19/93 (20%), Positives = 43/93 (45%)
Query: 3 EPETNNHEEPTFPTKRKPDQEETHHLPNKNPKLTSTTTVDQETELPTTVNSSSDAVPNNE 62
E E EE + + ++EE ++ + + D E D ++E
Sbjct: 581 EEEEEEEEEEEEEEEEEEEEEEEEEDEDEEDEDDAEEDEDDAEEDEDDAEEDDDEEDDDE 640
Query: 63 PENNTDDDDEDDEDEENSDEEPVVDRKGKGIMR 95
+++ D+D++++++EE +EE ++K K +R
Sbjct: 641 EDDDEDEDEDEEDEEEEEEEEEESEKKIKRNLR 673
Score = 35.8 bits (81), Expect = 0.050
Identities = 29/96 (30%), Positives = 52/96 (53%), Gaps = 9/96 (9%)
Query: 24 ETHHLPNKNPKLTSTTTV----DQETELPTTVNSS-SDAVPNNEPENNTDDD---DEDDE 75
ET NK+ S T + D++ ++PTT N + +A NNE ++TD + +D+
Sbjct: 52 ETELEKNKDDNSKSETLLKEEKDEKDDVPTTSNDNLKNAHNNNEISSSTDPTNIINVNDK 111
Query: 76 DEENSDEEPVVDRKGKGIMRDDKGKGKMIEEEDEDD 111
D ENS ++ D+K K +D K K + +++++ D
Sbjct: 112 DNENSVDKK-KDKKEKKHKKDKKEKKEKKDKKEKKD 146
Score = 35.0 bits (79), Expect = 0.086
Identities = 19/101 (18%), Positives = 41/101 (39%)
Query: 3 EPETNNHEEPTFPTKRKPDQEETHHLPNKNPKLTSTTTVDQETELPTTVNSSSDAVPNNE 62
E E EE + + ++EE + + E + + + + +
Sbjct: 578 EEEEEEEEEEEEEEEEEEEEEEEEEEEEDEDEEDEDDAEEDEDDAEEDEDDAEEDDDEED 637
Query: 63 PENNTDDDDEDDEDEENSDEEPVVDRKGKGIMRDDKGKGKM 103
+ DD+DED+++E+ +EE + K I R+ + K+
Sbjct: 638 DDEEDDDEDEDEDEEDEEEEEEEEEESEKKIKRNLRKNAKI 678
Score = 31.2 bits (69), Expect = 1.2
Identities = 25/120 (20%), Positives = 49/120 (40%), Gaps = 7/120 (5%)
Query: 3 EPETNNHEEPTFPTKRKPDQEETHHLP---NKNPKLTSTTTVDQETELPTTVNSSSDAVP 59
E E N + T K +++E +P N N K + PT + + +D
Sbjct: 54 ELEKNKDDNSKSETLLKEEKDEKDDVPTTSNDNLKNAHNNNEISSSTDPTNIINVND--- 110
Query: 60 NNEPENNTDDDDEDDEDEENSDEEPVVDRKGKGIMRDDKGKGKMIEEEDEDDDDSDDSDD 119
+ EN+ D + E + D++ ++K K +D K K E++ + D ++ +
Sbjct: 111 -KDNENSVDKKKDKKEKKHKKDKKEKKEKKDKKEKKDKKEKKHKKEKKHKKDKKKKENSE 169
>UBF1_MOUSE (P25976) Nucleolar transcription factor 1 (Upstream
binding factor 1) (UBF-1)
Length = 765
Score = 60.8 bits (146), Expect = 1e-09
Identities = 32/114 (28%), Positives = 60/114 (52%), Gaps = 3/114 (2%)
Query: 27 HLPNKNPKLTSTTTVDQETELPTTVNSSSDAVPNNEPENNTDDDDEDDEDEENSDEEPVV 86
++ NK +T + ++ T + S ++E E + ++++E++ED+EN D
Sbjct: 648 YISNKRKNMTKLRGPNPKSSRTTLQSKSESEEDDDEEEEDDEEEEEEEEDDENGDSSEDG 707
Query: 87 DRKGKGIMRDDKGKGKMIEEEDEDDDDSDDSD-DSDDDSDGNVSGSDS--DFSD 137
+ D+ G +++D+D+DD DD D D D++S+G+ S S S D SD
Sbjct: 708 GDSSESSSEDESEDGDENDDDDDDEDDEDDDDEDEDNESEGSSSSSSSSGDSSD 761
Score = 51.2 bits (121), Expect = 1e-06
Identities = 28/91 (30%), Positives = 42/91 (45%), Gaps = 6/91 (6%)
Query: 52 NSSSDAVPNNEPENNTDDDDEDDEDEENSDEEPVVDRKGKGIMRDDKGKGKMIEEEDEDD 111
N S + +DDDE++ED+E +EE D G +D G E +
Sbjct: 663 NPKSSRTTLQSKSESEEDDDEEEEDDEEEEEEEEDDENGDS--SEDGGDSS----ESSSE 716
Query: 112 DDSDDSDDSDDDSDGNVSGSDSDFSDDPLAE 142
D+S+D D++DDD D D D +D +E
Sbjct: 717 DESEDGDENDDDDDDEDDEDDDDEDEDNESE 747
Score = 43.1 bits (100), Expect = 3e-04
Identities = 25/89 (28%), Positives = 44/89 (49%), Gaps = 26/89 (29%)
Query: 64 ENNTDDDDEDDEDEENSDEEPVVDRKGKGIMRDDKGKGKMIEEEDEDDDDSDDSDDSDDD 123
++ ++ +++DDE+EE+ +EE EEE+EDD++ D S+D D
Sbjct: 672 QSKSESEEDDDEEEEDDEEE---------------------EEEEEDDENGDSSEDGGDS 710
Query: 124 S-----DGNVSGSDSDFSDDPLAEVDLDN 147
S D + G ++D DD + D D+
Sbjct: 711 SESSSEDESEDGDENDDDDDDEDDEDDDD 739
Score = 37.4 bits (85), Expect = 0.017
Identities = 23/92 (25%), Positives = 40/92 (43%), Gaps = 25/92 (27%)
Query: 59 PNNEPENNT---DDDDEDDEDEENSDEEPVVDRKGKGIMRDDKGKGKMIEEEDEDDDDSD 115
PN + T + E+D+DEE D+E EE+E+++D +
Sbjct: 662 PNPKSSRTTLQSKSESEEDDDEEEEDDE----------------------EEEEEEEDDE 699
Query: 116 DSDDSDDDSDGNVSGSDSDFSDDPLAEVDLDN 147
+ D S+D D + S S+ + D + D D+
Sbjct: 700 NGDSSEDGGDSSESSSEDESEDGDENDDDDDD 731
Score = 36.2 bits (82), Expect = 0.038
Identities = 21/79 (26%), Positives = 38/79 (47%), Gaps = 23/79 (29%)
Query: 54 SSDAVPNNEPENNTDDDDEDDEDEENSDEEPVVDRKGKGIMRDDKGKGKMIEEEDEDDDD 113
SS++ +E E+ D++D+DD+DE++ D+ ++EDED++
Sbjct: 710 SSESSSEDESEDG-DENDDDDDDEDDEDD----------------------DDEDEDNES 746
Query: 114 SDDSDDSDDDSDGNVSGSD 132
S S D + SGS+
Sbjct: 747 EGSSSSSSSSGDSSDSGSN 765
>YKK5_YEAST (P34250) Hypothetical 125.6 kDa protein in AAT1-GFA1
intergenic region
Length = 1132
Score = 60.1 bits (144), Expect = 2e-09
Identities = 42/133 (31%), Positives = 62/133 (46%), Gaps = 16/133 (12%)
Query: 18 RKPDQEE--THHLPNKNPKLTSTTTVDQETELPTTVNSSSDAVPNNEPENNTDDDDEDDE 75
+K DQEE + + P + K ST+ ++ +L S D NN P N+ DDDD+ D
Sbjct: 547 QKEDQEEALSDNEPESSEKFPSTSGIEN-VKLEDETGSVMDK--NNGPNNDKDDDDDKDN 603
Query: 76 DEENSDEEPVVDRKGKGIMRDDKGKGKMIEEEDEDDDDSDDSDDSDDDSDGNVSGSDSDF 135
D ++ D+ K + DDK E D+D++ DD DD DDD D D
Sbjct: 604 DNDDDDD------KDDDVNDDDKD-----ENVDDDENVDDDDDDDDDDDDEYHDSYDVIM 652
Query: 136 SDDPLAEVDLDNI 148
D E D+ ++
Sbjct: 653 RDPVQIEQDISDV 665
Score = 45.8 bits (107), Expect = 5e-05
Identities = 32/114 (28%), Positives = 49/114 (42%), Gaps = 8/114 (7%)
Query: 42 DQETELPTTVNSSSDAVPNNEPENNTDDDDE--DDEDEENSDEEPVVDRKGKGIMRD--- 96
D E + T S V N +D +E D + E+S++ P + D
Sbjct: 523 DSEKQEERTKGKKSGLVDTNCFLVQKEDQEEALSDNEPESSEKFPSTSGIENVKLEDETG 582
Query: 97 ---DKGKGKMIEEEDEDDDDSDDSDDSDDDSDGNVSGSDSDFSDDPLAEVDLDN 147
DK G +++D+DD D+D+ DD D D D N D + DD + D D+
Sbjct: 583 SVMDKNNGPNNDKDDDDDKDNDNDDDDDKDDDVNDDDKDENVDDDENVDDDDDD 636
Score = 38.9 bits (89), Expect = 0.006
Identities = 32/141 (22%), Positives = 64/141 (44%), Gaps = 11/141 (7%)
Query: 3 EPETNNHEEPTFPTKRKPDQEETHHLPNKN--PKLTSTTTVDQETELPTTVNSSSDAVPN 60
EPE++ T + ++ET + +KN P D++ + + D +
Sbjct: 559 EPESSEKFPSTSGIENVKLEDETGSVMDKNNGPNNDKDDDDDKDNDNDDDDDKDDDVNDD 618
Query: 61 NEPEN-------NTDDDDEDDEDEENSDEEPVVDRKGKGIMRD--DKGKGKMIEEEDEDD 111
++ EN + DDDD+DD+D+E D V+ R I +D D K E +
Sbjct: 619 DKDENVDDDENVDDDDDDDDDDDDEYHDSYDVIMRDPVQIEQDISDVPSLKHPSEYSTET 678
Query: 112 DDSDDSDDSDDDSDGNVSGSD 132
+D+ + + ++++ + SG++
Sbjct: 679 EDNKKKEQNSENAEVSQSGTN 699
Score = 34.3 bits (77), Expect = 0.15
Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Query: 5 ETNNHEEPTFPTKRKPDQEETHHLPNKNPK-LTSTTTVDQETELPTTVNSSSDA 57
+TN+H PT +K+K DQ +H +P +PK L + + L T SS++A
Sbjct: 788 KTNSHGPPTSISKQKYDQSSSHQIPVMSPKRLDDKRKITNRSCLRTLRGSSNEA 841
>NMD2_YEAST (P38798) Nonsense-mediated mRNA decay protein 2
(Up-frameshift suppressor 2)
Length = 1089
Score = 60.1 bits (144), Expect = 2e-09
Identities = 36/140 (25%), Positives = 67/140 (47%), Gaps = 18/140 (12%)
Query: 7 NNHEEPTFPTKRKPDQEETHHLPNKNPKLTSTTTVDQETELPTTVNSSSDAVPNNEPENN 66
+N +E P + + +E ++N D++ E+ T S+ + + +
Sbjct: 829 HNGKESAVPIESITEDDEDED--DENDDGVDLLGEDEDAEISTPNTESAPGKHQAKQDES 886
Query: 67 TDDDDEDDEDEENSDEEPVVDRKGKGIMRDDKGKGKMIEEEDEDDDDSDDSDDSDDDSDG 126
D+DDEDD+++++ D++ DD G EE ++DDD DD D+ DDD +
Sbjct: 887 EDEDDEDDDEDDDDDDD------------DDDDDG----EEGDEDDDEDDDDEDDDDEEE 930
Query: 127 NVSGSDSDFSDDPLAEVDLD 146
S SD ++ D A+ D++
Sbjct: 931 EDSDSDLEYGGDLDADRDIE 950
Score = 35.4 bits (80), Expect = 0.066
Identities = 30/115 (26%), Positives = 50/115 (43%), Gaps = 12/115 (10%)
Query: 2 AEPETNNHEEPTFPTKRKPDQEETHHLPNKNPKLTSTTTVDQETELPTTVNSSSDAVPNN 61
AE T N E P K + Q+E+ +++ D E + + D +
Sbjct: 865 AEISTPNTESA--PGKHQAKQDESEDEDDED---------DDEDDDDDDDDDDDDGEEGD 913
Query: 62 EPENNTDDDDEDDEDEENSDEEPVVDRKGKGIMRDDKGKGKMIEEEDEDDDDSDD 116
E +++ DDDDEDD+DEE D + ++ G D +M EE + D ++
Sbjct: 914 E-DDDEDDDDEDDDDEEEEDSDSDLEYGGDLDADRDIEMKRMYEEYERKLKDEEE 967
>UBF1_XENLA (P25979) Nucleolar transcription factor 1 (Upstream
binding factor-1) (UBF-1) (xUBF-1)
Length = 677
Score = 58.5 bits (140), Expect = 7e-09
Identities = 30/116 (25%), Positives = 53/116 (44%)
Query: 22 QEETHHLPNKNPKLTSTTTVDQETELPTTVNSSSDAVPNNEPENNTDDDDEDDEDEENSD 81
Q+ + + K ST + P V S + + +++ D+DD+DDEDE+ D
Sbjct: 558 QDRAAYKEQNSNKRKSTAKIQVPVAKPKLVAQSKSDDDDEDDDDDEDEDDDDDEDEDKED 617
Query: 82 EEPVVDRKGKGIMRDDKGKGKMIEEEDEDDDDSDDSDDSDDDSDGNVSGSDSDFSD 137
D D + + +EE E+D+D ++ DD ++ + S S +D SD
Sbjct: 618 SSEDGDSSESSSDEDSEDGEENEDEEGEEDEDEEEDDDDNESGSSSSSSSSADSSD 673
Score = 50.1 bits (118), Expect = 3e-06
Identities = 28/91 (30%), Positives = 45/91 (48%), Gaps = 15/91 (16%)
Query: 57 AVPNNEPENNTDDDDEDDEDEENSDEEPVVDRKGKGIMRDDKGKGKMIEEEDEDDDDSDD 116
A P ++ +DDDDEDD+D+E+ D++ DD+ + K E+ +D DS +
Sbjct: 582 AKPKLVAQSKSDDDDEDDDDDEDEDDD------------DDEDEDK---EDSSEDGDSSE 626
Query: 117 SDDSDDDSDGNVSGSDSDFSDDPLAEVDLDN 147
S +D DG + + D+ E D DN
Sbjct: 627 SSSDEDSEDGEENEDEEGEEDEDEEEDDDDN 657
Score = 36.6 bits (83), Expect = 0.029
Identities = 21/74 (28%), Positives = 37/74 (49%), Gaps = 8/74 (10%)
Query: 77 EENSDEEPVVDRKGKGIMRDDKGKGKMIEE---EDEDDDDSDDSDDSDDDSDGNVSGSDS 133
E+NS++ RK ++ K K++ + +D+D+DD DD D+ DDD + S
Sbjct: 565 EQNSNK-----RKSTAKIQVPVAKPKLVAQSKSDDDDEDDDDDEDEDDDDDEDEDKEDSS 619
Query: 134 DFSDDPLAEVDLDN 147
+ D + D D+
Sbjct: 620 EDGDSSESSSDEDS 633
>NUCL_CHICK (P15771) Nucleolin (Protein C23)
Length = 694
Score = 58.2 bits (139), Expect = 9e-09
Identities = 38/142 (26%), Positives = 64/142 (44%), Gaps = 11/142 (7%)
Query: 3 EPETNNHEEPTFPTKRKPDQEETHHLPNKNPKLTSTTTVDQETELPTTVNSSSDAVPNNE 62
E E + +E + + D+EE +P K S V + P V + ++ E
Sbjct: 119 EDEDDEDDEEDEDEEEESDEEEEPAVPVKPAAKKSAAAVPAKK--PAVVPAKQES----E 172
Query: 63 PENNTDDDDEDDEDEENSDEE-----PVVDRKGKGIMRDDKGKGKMIEEEDEDDDDSDDS 117
E DD++ED+ED+E+ DE V + K K + +EEDE+D+D D+
Sbjct: 173 EEEEEDDEEEDEEDDESEDEAMDTTPAPVKKPTPAKATPAKAKAESEDEEDEEDEDEDEE 232
Query: 118 DDSDDDSDGNVSGSDSDFSDDP 139
D+ D++ D S + + P
Sbjct: 233 DEDDEEEDEEESEDEKPVKEAP 254
Score = 48.5 bits (114), Expect = 7e-06
Identities = 29/85 (34%), Positives = 44/85 (51%), Gaps = 13/85 (15%)
Query: 52 NSSSDAVPNNEPENNTDDDDEDDEDEE---NSDEEPVVD-----RKGKGIMRDDK----- 98
N + +E E+ D+DDE+DEDEE + +EEP V +K + K
Sbjct: 107 NGKNAKKEESEEEDEDDEDDEEDEDEEEESDEEEEPAVPVKPAAKKSAAAVPAKKPAVVP 166
Query: 99 GKGKMIEEEDEDDDDSDDSDDSDDD 123
K + EEE+EDD++ D+ DD +D
Sbjct: 167 AKQESEEEEEEDDEEEDEEDDESED 191
Score = 46.2 bits (108), Expect = 4e-05
Identities = 24/90 (26%), Positives = 41/90 (44%)
Query: 2 AEPETNNHEEPTFPTKRKPDQEETHHLPNKNPKLTSTTTVDQETELPTTVNSSSDAVPNN 61
A+ E+ EE + + D E + P T + T S + +
Sbjct: 167 AKQESEEEEEEDDEEEDEEDDESEDEAMDTTPAPVKKPTPAKATPAKAKAESEDEEDEED 226
Query: 62 EPENNTDDDDEDDEDEENSDEEPVVDRKGK 91
E E+ D+DDE++++EE+ DE+PV + GK
Sbjct: 227 EDEDEEDEDDEEEDEEESEDEKPVKEAPGK 256
Score = 38.1 bits (87), Expect = 0.010
Identities = 15/36 (41%), Positives = 23/36 (63%)
Query: 90 GKGIMRDDKGKGKMIEEEDEDDDDSDDSDDSDDDSD 125
GKG K + EEEDEDD+D ++ +D +++SD
Sbjct: 102 GKGAKNGKNAKKEESEEEDEDDEDDEEDEDEEEESD 137
Score = 33.5 bits (75), Expect = 0.25
Identities = 30/129 (23%), Positives = 51/129 (39%), Gaps = 32/129 (24%)
Query: 3 EPETNNHEEPTFPTK------------RKP----------------DQEETHHLPNKNPK 34
E E++ EEP P K +KP D+EE +
Sbjct: 133 EEESDEEEEPAVPVKPAAKKSAAAVPAKKPAVVPAKQESEEEEEEDDEEEDEEDDESEDE 192
Query: 35 LTSTTTVDQETELPTTVNSSSDAVPNNEPENNTDDDDED-DEDEENSDEEPVVDRKGKGI 93
TT + P ++ A E E+ D++DED DE++E+ +EE + + +
Sbjct: 193 AMDTTPAPVKKPTPA---KATPAKAKAESEDEEDEEDEDEDEEDEDDEEEDEEESEDEKP 249
Query: 94 MRDDKGKGK 102
+++ GK K
Sbjct: 250 VKEAPGKRK 258
Score = 32.3 bits (72), Expect = 0.56
Identities = 24/103 (23%), Positives = 41/103 (39%), Gaps = 1/103 (0%)
Query: 3 EPETNNHEEPTFPTKRKPDQEETHHLPNKNPKLTSTTTVDQETELPTTVNSSSDAVPNNE 62
E E ++ EE + + + +T P K P T + E D + E
Sbjct: 174 EEEEDDEEEDEEDDESEDEAMDTTPAPVKKPTPAKATPAKAKAESEDE-EDEEDEDEDEE 232
Query: 63 PENNTDDDDEDDEDEENSDEEPVVDRKGKGIMRDDKGKGKMIE 105
E++ ++D+E+ EDE+ E P +K + K K E
Sbjct: 233 DEDDEEEDEEESEDEKPVKEAPGKRKKEMANKSAPEAKKKKTE 275
>SPBP_RAT (P08723) Prostatic spermine-binding protein precursor
(SBP)
Length = 279
Score = 57.8 bits (138), Expect = 1e-08
Identities = 31/91 (34%), Positives = 49/91 (53%), Gaps = 6/91 (6%)
Query: 52 NSSSDAVPNNEPENNTDDDDEDDEDEENSDEEPVVDRKGKGIMRDDKGKGKMIEEEDE-- 109
N +N+ +++ D DD+DD+ E++++E+ +R K +D K +++D
Sbjct: 174 NEEDHGDKDNDNDHDDDHDDDDDDKEDDNEEDVDDERDDKDDDEEDDDNDKENDKDDGEG 233
Query: 110 --DDDDSDDSDDSDDDSDGNVSGSDSDFSDD 138
DDDD+DD DD DD G SG D D DD
Sbjct: 234 SGDDDDNDDEDDDKDDDGG--SGDDGDDGDD 262
Score = 53.9 bits (128), Expect = 2e-07
Identities = 35/132 (26%), Positives = 56/132 (41%), Gaps = 10/132 (7%)
Query: 7 NNHEEPTFPTKRKPDQEETHHLPNKNPKLTSTTTVDQETELPTTVNSSSDAVPNNEPENN 66
N H++ K D ++ H N+ D + + + D N E ++
Sbjct: 151 NIHDDFDDNDDDKEDDDDEHDDDNEEDHGDKDNDNDHDDDHDDDDDDKED--DNEEDVDD 208
Query: 67 TDDDDEDDEDEENSDEEPVVDRKGKGIMRDDKGKGKMIEEEDEDDDDSDDSDDSDDDSDG 126
DD +DDE+++++D+E D D +G G + +DEDDD DD DD DG
Sbjct: 209 ERDDKDDDEEDDDNDKENDKD--------DGEGSGDDDDNDDEDDDKDDDGGSGDDGDDG 260
Query: 127 NVSGSDSDFSDD 138
+ D DD
Sbjct: 261 DDDEDDDGGDDD 272
Score = 53.1 bits (126), Expect = 3e-07
Identities = 27/87 (31%), Positives = 43/87 (49%), Gaps = 16/87 (18%)
Query: 60 NNEPENNTDDDDEDDEDEENSDEEPVVDRKGKGIMRDDKGKGKMIEEEDEDDDDSDDSDD 119
+ + +N+ DDD +DD+D++ D E VD E +D+DDD+ DD +D
Sbjct: 180 DKDNDNDHDDDHDDDDDDKEDDNEEDVDD----------------ERDDKDDDEEDDDND 223
Query: 120 SDDDSDGNVSGSDSDFSDDPLAEVDLD 146
++D D D D +DD + D D
Sbjct: 224 KENDKDDGEGSGDDDDNDDEDDDKDDD 250
Score = 50.8 bits (120), Expect = 2e-06
Identities = 29/84 (34%), Positives = 44/84 (51%), Gaps = 11/84 (13%)
Query: 64 ENNTDDDDEDDEDEENSDEEPVVDRKGKGIMRDDKGKGKMIEEEDEDDDDSDDSDDSDDD 123
+N DD D++D+D+E+ D+E D +++ G + D DDD DD DD +DD
Sbjct: 150 KNIHDDFDDNDDDKEDDDDEHDDD--------NEEDHGDKDNDNDHDDDHDDDDDDKEDD 201
Query: 124 SDGNVSGSDSDFSDDPLAEVDLDN 147
++ +V D DD E D DN
Sbjct: 202 NEEDVDDERDDKDDD---EEDDDN 222
Score = 50.8 bits (120), Expect = 2e-06
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Query: 65 NNTDDDDEDDEDEENSD-EEPVVDRKGKGIMRDDKGKGKMIEEEDEDDDDSDDSDDSDDD 123
++ DDD EDD+DE + D EE D+ DD +E+D ++D D+ DD DDD
Sbjct: 157 DDNDDDKEDDDDEHDDDNEEDHGDKDNDNDHDDDHDDDDDDKEDDNEEDVDDERDDKDDD 216
Query: 124 SDGNVSGSDSDFSDDPLAEVDLDN 147
+ + + ++D D + D DN
Sbjct: 217 EEDDDNDKENDKDDGEGSGDDDDN 240
Score = 47.4 bits (111), Expect = 2e-05
Identities = 32/121 (26%), Positives = 53/121 (43%), Gaps = 17/121 (14%)
Query: 7 NNHEEPTFPTKRKPDQEETHHLPNKNPKLTSTTTVDQETELPTTVNSSSDAVPNNEPENN 66
+++EE D ++ H + + + + VD E + D N+ EN+
Sbjct: 172 DDNEEDHGDKDNDNDHDDDHDDDDDDKEDDNEEDVDDERDDKDDDEEDDD----NDKEND 227
Query: 67 TDDDDEDDEDEENSDEEPVVDRKGKGIMRDDKGKGKMIEEEDEDDDDSDDSDDSDDDSDG 126
DD + +D++N DE+ D DD G G +D DD D D+ DD DD +G
Sbjct: 228 KDDGEGSGDDDDNDDEDDDKD--------DDGGSG-----DDGDDGDDDEDDDGGDDDNG 274
Query: 127 N 127
+
Sbjct: 275 D 275
Score = 36.2 bits (82), Expect = 0.038
Identities = 20/81 (24%), Positives = 35/81 (42%)
Query: 3 EPETNNHEEPTFPTKRKPDQEETHHLPNKNPKLTSTTTVDQETELPTTVNSSSDAVPNNE 62
+ E +N E+ K D EE +N K + D + + D ++
Sbjct: 197 DKEDDNEEDVDDERDDKDDDEEDDDNDKENDKDDGEGSGDDDDNDDEDDDKDDDGGSGDD 256
Query: 63 PENNTDDDDEDDEDEENSDEE 83
++ DD+D+D D++N DEE
Sbjct: 257 GDDGDDDEDDDGGDDDNGDEE 277
Score = 31.6 bits (70), Expect = 0.95
Identities = 13/39 (33%), Positives = 20/39 (50%)
Query: 100 KGKMIEEEDEDDDDSDDSDDSDDDSDGNVSGSDSDFSDD 138
K K I ++ +D+DD + DD + D D D D +D
Sbjct: 148 KWKNIHDDFDDNDDDKEDDDDEHDDDNEEDHGDKDNDND 186
>NUCL_RAT (P13383) Nucleolin (Protein C23)
Length = 712
Score = 57.4 bits (137), Expect = 2e-08
Identities = 29/92 (31%), Positives = 53/92 (57%), Gaps = 4/92 (4%)
Query: 53 SSSDAVPNNEPENNTDDDDEDDEDEENSDEEPVVDRKGKGIMRDDK---GKGKMIEEEDE 109
+S D ++ + + DDDDE++E+E++S+EE + KG K K K + EE+E
Sbjct: 185 ASEDEDEEDDDDEDDDDDDEEEEEEDDSEEEVMEITPAKGKKTPAKVVPVKAKSVAEEEE 244
Query: 110 DD-DDSDDSDDSDDDSDGNVSGSDSDFSDDPL 140
DD DD D+ +D D++ + + D + ++P+
Sbjct: 245 DDEDDEDEEEDEDEEDEEDDEDEDEEEEEEPV 276
Score = 55.1 bits (131), Expect = 8e-08
Identities = 29/109 (26%), Positives = 54/109 (48%), Gaps = 9/109 (8%)
Query: 54 SSDAVPNNEPENNTDDDDEDDEDEENSDEEPVVDRKGKGIMRDDKGKGKM-------IEE 106
++ A P +E E+ DDDDEDD+D++ +EE D + +M KGK ++
Sbjct: 179 AAPAAPASEDEDEEDDDDEDDDDDDEEEEEE--DDSEEEVMEITPAKGKKTPAKVVPVKA 236
Query: 107 EDEDDDDSDDSDDSDDDSDGNVSGSDSDFSDDPLAEVDLDNILPSRTRR 155
+ +++ DD DD D++ D + + D +D E + P + ++
Sbjct: 237 KSVAEEEEDDEDDEDEEEDEDEEDEEDDEDEDEEEEEEPVKAAPGKRKK 285
Score = 52.4 bits (124), Expect = 5e-07
Identities = 31/91 (34%), Positives = 50/91 (54%), Gaps = 16/91 (17%)
Query: 60 NNEPENNTDDDDEDDEDEENSDEE-------PVVDRKGKGIMRDDKGKGKMIEEEDEDDD 112
N + E++ +D+DE+DED+ + DE+ PVV KG+ + K EDED++
Sbjct: 138 NAKKEDSDEDEDEEDEDDSDEDEDEEDEFEPPVV----KGV-KPAKAAPAAPASEDEDEE 192
Query: 113 DSDDSDDSDDDSDGNVSGSDSDFSDDPLAEV 143
D DD DD DDD + + D S++ + E+
Sbjct: 193 DDDDEDDDDDDEE----EEEEDDSEEEVMEI 219
Score = 49.3 bits (116), Expect = 4e-06
Identities = 34/101 (33%), Positives = 53/101 (51%), Gaps = 15/101 (14%)
Query: 60 NNEPENNTDDDDED-DEDEENSDEEPVVDRKGKGIMRDDKGKGKMIEEEDEDDDDSDDSD 118
++E E+ D+DD D DEDEE+ E PVV KG+ K ED+D+ DD D
Sbjct: 144 SDEDEDEEDEDDSDEDEDEEDEFEPPVV----KGVK---PAKAAPAAPASEDEDEEDD-D 195
Query: 119 DSDDDSDGNVSGSDSDFSDDPLAEVDLDNILPSRTRRRTAQ 159
D DDD D D + ++ +E ++ I P++ ++ A+
Sbjct: 196 DEDDDDD------DEEEEEEDDSEEEVMEITPAKGKKTPAK 230
Score = 34.7 bits (78), Expect = 0.11
Identities = 13/31 (41%), Positives = 21/31 (66%)
Query: 95 RDDKGKGKMIEEEDEDDDDSDDSDDSDDDSD 125
++ K K +EDED++D DDSD+ +D+ D
Sbjct: 134 KNGKNAKKEDSDEDEDEEDEDDSDEDEDEED 164
Score = 34.7 bits (78), Expect = 0.11
Identities = 18/38 (47%), Positives = 24/38 (62%), Gaps = 3/38 (7%)
Query: 91 KGIMRDDKG--KGKMIEEEDEDDD-DSDDSDDSDDDSD 125
KG + KG GK ++ED D+D D +D DDSD+D D
Sbjct: 124 KGAVTPAKGAKNGKNAKKEDSDEDEDEEDEDDSDEDED 161
Score = 34.3 bits (77), Expect = 0.15
Identities = 20/71 (28%), Positives = 31/71 (43%), Gaps = 1/71 (1%)
Query: 21 DQEETHHLPNKNPKLTSTTTVDQETELPTTVNSSSDAVPNNEPENNTDDDDEDDEDEENS 80
++E P K K + + + D E E+ D++D++DEDEE
Sbjct: 213 EEEVMEITPAKGKKTPAKVVPVKAKSVAEEEEDDEDDEDEEEDEDEEDEEDDEDEDEE-E 271
Query: 81 DEEPVVDRKGK 91
+EEPV GK
Sbjct: 272 EEEPVKAAPGK 282
Score = 33.9 bits (76), Expect = 0.19
Identities = 21/98 (21%), Positives = 39/98 (39%), Gaps = 25/98 (25%)
Query: 21 DQEETHHLPNKNPKLTSTTTVDQETELPTTVNSSSDAVPNNEPENNTDDDDEDDEDEENS 80
D EE + ++ T + V + +V E ++ D+D+E+DEDEE+
Sbjct: 202 DDEEEEEEDDSEEEVMEITPAKGKKTPAKVVPVKAKSVAEEEEDDEDDEDEEEDEDEED- 260
Query: 81 DEEPVVDRKGKGIMRDDKGKGKMIEEEDEDDDDSDDSD 118
EE+DED+D+ ++ +
Sbjct: 261 ------------------------EEDDEDEDEEEEEE 274
Score = 32.3 bits (72), Expect = 0.56
Identities = 12/36 (33%), Positives = 24/36 (66%), Gaps = 4/36 (11%)
Query: 88 RKGKGIMRDDKGKGKMIEEEDEDDDDSDDSDDSDDD 123
+ GK ++D + +E++ED+DDSD+ +D +D+
Sbjct: 134 KNGKNAKKEDSDE----DEDEEDEDDSDEDEDEEDE 165
Score = 30.8 bits (68), Expect = 1.6
Identities = 15/82 (18%), Positives = 37/82 (44%)
Query: 21 DQEETHHLPNKNPKLTSTTTVDQETELPTTVNSSSDAVPNNEPENNTDDDDEDDEDEENS 80
D+EE ++ + T ++T + E + + +D++ED+++E+
Sbjct: 203 DEEEEEEDDSEEEVMEITPAKGKKTPAKVVPVKAKSVAEEEEDDEDDEDEEEDEDEEDEE 262
Query: 81 DEEPVVDRKGKGIMRDDKGKGK 102
D+E + + + ++ GK K
Sbjct: 263 DDEDEDEEEEEEPVKAAPGKRK 284
Score = 30.8 bits (68), Expect = 1.6
Identities = 24/115 (20%), Positives = 46/115 (39%), Gaps = 22/115 (19%)
Query: 2 AEPETNNHEEPTFPTKRKPDQEETHHLPNKNPKLTSTTTVDQETELPTTVNSSSDAVPNN 61
A P + + +E + D +E + + + T + + P V
Sbjct: 182 AAPASEDEDEEDDDDEDDDDDDEEEEEEDDSEEEVMEITPAKGKKTPAKVVPVKAKSVAE 241
Query: 62 EPENNTDDDDEDDEDEENSDEEPVVDRKGKGIMRDDKGKGKMIEEEDEDDDDSDD 116
E E++ DD+DE+ EDE+ DEE ++EDED+++ ++
Sbjct: 242 EEEDDEDDEDEE-EDEDEEDEE---------------------DDEDEDEEEEEE 274
Score = 28.9 bits (63), Expect = 6.1
Identities = 15/41 (36%), Positives = 26/41 (62%), Gaps = 2/41 (4%)
Query: 53 SSSDAVPNNEPENNTDDDD-EDDEDEENSDEEPVV-DRKGK 91
S A P E E +++D++ +DED+ + +EE V+ +KGK
Sbjct: 13 SKKMAPPPKEVEEDSEDEEMSEDEDDSSGEEEVVIPQKKGK 53
>CAQ1_RANES (P31231) Calsequestrin, skeletal muscle isoform
precursor
Length = 420
Score = 57.4 bits (137), Expect = 2e-08
Identities = 34/98 (34%), Positives = 48/98 (48%), Gaps = 27/98 (27%)
Query: 41 VDQETELPTTVNSSSDAVPNN-EPENNTDDDDEDDEDEENSDEEPVVDRKGKGIMRDDKG 99
+D E +LPT V+ D + + E E NT+DDD+DD+D+++ D+
Sbjct: 349 MDDEEDLPT-VDELEDWIEDVLEGEVNTEDDDDDDDDDDDDDD----------------- 390
Query: 100 KGKMIEEEDEDDDDSDDSDDSDDDSDGNVSGSDSDFSD 137
D+DDDD DD DD DDD D + D D D
Sbjct: 391 --------DDDDDDDDDDDDDDDDDDDDDDDDDDDDDD 420
Score = 51.6 bits (122), Expect = 9e-07
Identities = 28/82 (34%), Positives = 41/82 (49%)
Query: 66 NTDDDDEDDEDEENSDEEPVVDRKGKGIMRDDKGKGKMIEEEDEDDDDSDDSDDSDDDSD 125
N D D D ++ ++ P VD I +G+ +++D+DDDD DD DD DDD D
Sbjct: 338 NVTDADSVWMDMDDEEDLPTVDELEDWIEDVLEGEVNTEDDDDDDDDDDDDDDDDDDDDD 397
Query: 126 GNVSGSDSDFSDDPLAEVDLDN 147
+ D D DD + D D+
Sbjct: 398 DDDDDDDDDDDDDDDDDDDDDD 419
Score = 31.6 bits (70), Expect = 0.95
Identities = 11/44 (25%), Positives = 27/44 (61%)
Query: 40 TVDQETELPTTVNSSSDAVPNNEPENNTDDDDEDDEDEENSDEE 83
T D + + + D +++ +++ DDDD+DD+D+++ D++
Sbjct: 375 TEDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD 418
>YHT1_YEAST (P38835) Hypothetical 95.1 kDa protein in ACT5-YCK1
intergenic region
Length = 840
Score = 57.0 bits (136), Expect = 2e-08
Identities = 25/79 (31%), Positives = 43/79 (53%), Gaps = 20/79 (25%)
Query: 51 VNSSSDAVPNNEPENNTDDDDEDDEDEENSDEEPVVDRKGKGIMRDDKGKGKMIEEEDED 110
V ++ DA + E + + DD ++DD+D+++ D++ ++ED+D
Sbjct: 781 VGTTKDAEDHGEDDGDGDDGEDDDDDDDDDDDDD--------------------DDEDDD 820
Query: 111 DDDSDDSDDSDDDSDGNVS 129
DDD DD DD DDD DG ++
Sbjct: 821 DDDDDDDDDDDDDDDGQIT 839
Score = 47.8 bits (112), Expect = 1e-05
Identities = 20/43 (46%), Positives = 26/43 (59%)
Query: 96 DDKGKGKMIEEEDEDDDDSDDSDDSDDDSDGNVSGSDSDFSDD 138
+D G G E++D+DDDD DD DD +DD D + D D DD
Sbjct: 792 EDDGDGDDGEDDDDDDDDDDDDDDDEDDDDDDDDDDDDDDDDD 834
Score = 42.0 bits (97), Expect = 7e-04
Identities = 18/43 (41%), Positives = 24/43 (54%)
Query: 96 DDKGKGKMIEEEDEDDDDSDDSDDSDDDSDGNVSGSDSDFSDD 138
+D G+ ++ EDDDD DD DD DDD + + D D DD
Sbjct: 788 EDHGEDDGDGDDGEDDDDDDDDDDDDDDDEDDDDDDDDDDDDD 830
Score = 40.4 bits (93), Expect = 0.002
Identities = 18/47 (38%), Positives = 24/47 (50%)
Query: 92 GIMRDDKGKGKMIEEEDEDDDDSDDSDDSDDDSDGNVSGSDSDFSDD 138
G +D + G+ + D+ +DD DD DD DDD D D D DD
Sbjct: 782 GTTKDAEDHGEDDGDGDDGEDDDDDDDDDDDDDDDEDDDDDDDDDDD 828
Score = 39.3 bits (90), Expect = 0.005
Identities = 18/42 (42%), Positives = 23/42 (53%)
Query: 106 EEDEDDDDSDDSDDSDDDSDGNVSGSDSDFSDDPLAEVDLDN 147
E+D D DD +D DD DDD D + D D DD + D D+
Sbjct: 792 EDDGDGDDGEDDDDDDDDDDDDDDDEDDDDDDDDDDDDDDDD 833
Score = 39.3 bits (90), Expect = 0.005
Identities = 19/49 (38%), Positives = 25/49 (50%)
Query: 99 GKGKMIEEEDEDDDDSDDSDDSDDDSDGNVSGSDSDFSDDPLAEVDLDN 147
G K E+ EDD D DD +D DDD D + D + DD + D D+
Sbjct: 782 GTTKDAEDHGEDDGDGDDGEDDDDDDDDDDDDDDDEDDDDDDDDDDDDD 830
Score = 34.3 bits (77), Expect = 0.15
Identities = 15/62 (24%), Positives = 34/62 (54%)
Query: 30 NKNPKLTSTTTVDQETELPTTVNSSSDAVPNNEPENNTDDDDEDDEDEENSDEEPVVDRK 89
NKN + +T + E + D +++ +++ DDD++DD+D+++ D++ D
Sbjct: 776 NKNAIVGTTKDAEDHGEDDGDGDDGEDDDDDDDDDDDDDDDEDDDDDDDDDDDDDDDDDD 835
Query: 90 GK 91
G+
Sbjct: 836 GQ 837
Score = 33.1 bits (74), Expect = 0.33
Identities = 16/47 (34%), Positives = 28/47 (59%), Gaps = 4/47 (8%)
Query: 94 MRDDKGKGKMIEEEDEDDDDS----DDSDDSDDDSDGNVSGSDSDFS 136
+ DD+ + E+E++ + D D +DD+DD + G GS+SD+S
Sbjct: 616 INDDESATETDEDENDGETDEYAGDDTNDDTDDSNIGYAYGSESDYS 662
Score = 29.3 bits (64), Expect = 4.7
Identities = 14/50 (28%), Positives = 22/50 (44%)
Query: 98 KGKGKMIEEEDEDDDDSDDSDDSDDDSDGNVSGSDSDFSDDPLAEVDLDN 147
K K ++ + +D +D D DD D + D D DD + D D+
Sbjct: 775 KNKNAIVGTTKDAEDHGEDDGDGDDGEDDDDDDDDDDDDDDDEDDDDDDD 824
>NAB3_YEAST (P38996) Nuclear polyadenylated RNA-binding protein 3
Length = 802
Score = 57.0 bits (136), Expect = 2e-08
Identities = 39/128 (30%), Positives = 60/128 (46%), Gaps = 20/128 (15%)
Query: 30 NKNPKLTSTTTVDQ-ETELPTTVNSSSDAVPNNEPENNTDDDDEDDEDEE---------- 78
N+N + +++ D E + P + N E D +DE++ED+E
Sbjct: 25 NENELMNNSSADDGIEFDAPEEEREAEREEENEEQHELEDVNDEEEEDKEEKGEENGEVI 84
Query: 79 NSDEEPVVDRKGKGIMRDDKGKGKMIEEEDEDDDDSDDSDDSDDD---------SDGNVS 129
N++EE + + KG DD + EEE+EDDDD DD DD D++ +D +
Sbjct: 85 NTEEEEEEEHQQKGGNDDDDDDNEEEEEEEEDDDDDDDDDDDDEEEEEEEEEEGNDNSSV 144
Query: 130 GSDSDFSD 137
GSDS D
Sbjct: 145 GSDSAAED 152
Score = 54.3 bits (129), Expect = 1e-07
Identities = 28/120 (23%), Positives = 56/120 (46%), Gaps = 2/120 (1%)
Query: 2 AEPETNNHEEPTFPTKRKPDQEETHHLPNKNPKLTSTTTVDQETELPTTVNSSSDAVPNN 61
AE E N E+ ++E+ +N ++ +T ++E N D +N
Sbjct: 50 AEREEENEEQHELEDVNDEEEEDKEEKGEENGEVINTEEEEEEEHQQKGGNDDDD--DDN 107
Query: 62 EPENNTDDDDEDDEDEENSDEEPVVDRKGKGIMRDDKGKGKMIEEEDEDDDDSDDSDDSD 121
E E ++DD+DD+D+++ DEE + + +G G E+ ++++D D + D +
Sbjct: 108 EEEEEEEEDDDDDDDDDDDDEEEEEEEEEEGNDNSSVGSDSAAEDGEDEEDKKDKTKDKE 167
Score = 52.8 bits (125), Expect = 4e-07
Identities = 30/126 (23%), Positives = 54/126 (42%), Gaps = 25/126 (19%)
Query: 17 KRKPDQEETHHLPNKNPKLTSTTTVDQETELPTTVNSSSDAVPNNEPENNTDDDDEDDED 76
+R+ + EE H L + N + ++ E +N+ + ++ + DDDD+D+E+
Sbjct: 51 EREEENEEQHELEDVNDE-EEEDKEEKGEENGEVINTEEEEEEEHQQKGGNDDDDDDNEE 109
Query: 77 EENSDEEPVVDRKGKGIMRDDKGKGKMIEEEDEDDDDSDDSDDSDDDSDGNVSGSDSDFS 136
EE EE+D+DDDD DD D+ +++ + +S
Sbjct: 110 EEEE------------------------EEDDDDDDDDDDDDEEEEEEEEEEGNDNSSVG 145
Query: 137 DDPLAE 142
D AE
Sbjct: 146 SDSAAE 151
Score = 45.1 bits (105), Expect = 8e-05
Identities = 32/121 (26%), Positives = 60/121 (49%), Gaps = 13/121 (10%)
Query: 32 NPKLTSTTTVDQETELPTTVNSSSDA-----VPNNEPENNTDDDDEDDEDEENSDEEPVV 86
+P+L S + E EL NSS+D P E E ++++E+ + E+ ++E
Sbjct: 15 SPEL-SVDSNSNENELMN--NSSADDGIEFDAPEEEREAEREEENEEQHELEDVNDEEEE 71
Query: 87 DRKGKGIMRDDKGKGKMIEEEDEDDDDSDDSDDSDDDSDGNVSGSDSDFSDDPLAEVDLD 146
D++ KG + G++I E+E++++ +DDD D N + + DD + D D
Sbjct: 72 DKEEKG-----EENGEVINTEEEEEEEHQQKGGNDDDDDDNEEEEEEEEDDDDDDDDDDD 126
Query: 147 N 147
+
Sbjct: 127 D 127
>NUCL_MOUSE (P09405) Nucleolin (Protein C23)
Length = 706
Score = 55.5 bits (132), Expect = 6e-08
Identities = 26/97 (26%), Positives = 55/97 (55%), Gaps = 4/97 (4%)
Query: 48 PTTVNSSSDAVPNNEPENNTDDDDEDDEDEENSDEEPVVD---RKGKGI-MRDDKGKGKM 103
P ++ A + E + + DD+++DDE+EE+ EE V++ KGK + K K
Sbjct: 178 PAKAAPAAPASEDEEDDEDEDDEEDDDEEEEDDSEEEVMEITTAKGKKTPAKVVPMKAKS 237
Query: 104 IEEEDEDDDDSDDSDDSDDDSDGNVSGSDSDFSDDPL 140
+ EE++D+++ +D +D DD+ + + + + ++P+
Sbjct: 238 VAEEEDDEEEDEDDEDEDDEEEDDEDDDEEEEEEEPV 274
Score = 53.9 bits (128), Expect = 2e-07
Identities = 24/72 (33%), Positives = 39/72 (53%)
Query: 52 NSSSDAVPNNEPENNTDDDDEDDEDEENSDEEPVVDRKGKGIMRDDKGKGKMIEEEDEDD 111
N+ + +E E + DD DED++DEE + EP + + K EE+DED+
Sbjct: 138 NAKKEDSDEDEDEEDEDDSDEDEDDEEEDEFEPPIVKGVKPAKAAPAAPASEDEEDDEDE 197
Query: 112 DDSDDSDDSDDD 123
DD +D D+ ++D
Sbjct: 198 DDEEDDDEEEED 209
Score = 42.0 bits (97), Expect = 7e-04
Identities = 19/74 (25%), Positives = 36/74 (47%), Gaps = 8/74 (10%)
Query: 60 NNEPENNTDDDDEDDEDEENSDEEPVVDRKG--------KGIMRDDKGKGKMIEEEDEDD 111
N + D D+++DE++E+ +E D + KG+ E++EDD
Sbjct: 135 NGKNAKKEDSDEDEDEEDEDDSDEDEDDEEEDEFEPPIVKGVKPAKAAPAAPASEDEEDD 194
Query: 112 DDSDDSDDSDDDSD 125
+D DD +D D++ +
Sbjct: 195 EDEDDEEDDDEEEE 208
Score = 40.4 bits (93), Expect = 0.002
Identities = 24/89 (26%), Positives = 39/89 (42%), Gaps = 1/89 (1%)
Query: 3 EPETNNHEEPTFPTKRKPDQEETHHLPNKNPKLTSTTTVDQETELPTTVNSSSDAVPNNE 62
+ E + EE + +EE + K T V + + + ++E
Sbjct: 193 DDEDEDDEEDDDEEEEDDSEEEVMEITTAKGKKTPAKVVPMKAKSVAEEEDDEEEDEDDE 252
Query: 63 PENNTDDDDEDDEDEENSDEEPVVDRKGK 91
E++ ++DDEDD DEE +EEPV GK
Sbjct: 253 DEDDEEEDDEDD-DEEEEEEEPVKAAPGK 280
Score = 38.9 bits (89), Expect = 0.006
Identities = 24/101 (23%), Positives = 44/101 (42%), Gaps = 2/101 (1%)
Query: 2 AEPETNNHEEPTFPTKRKPDQEETHHLPNKNPKLTSTTTVDQETELPTTVNSSSDAVPNN 61
A P + + E+ + D EE + ++ TT + V + +V
Sbjct: 184 AAPASEDEEDDEDEDDEEDDDEEEED--DSEEEVMEITTAKGKKTPAKVVPMKAKSVAEE 241
Query: 62 EPENNTDDDDEDDEDEENSDEEPVVDRKGKGIMRDDKGKGK 102
E + D+DDED++DEE DE+ + + + ++ GK K
Sbjct: 242 EDDEEEDEDDEDEDDEEEDDEDDDEEEEEEEPVKAAPGKRK 282
Score = 35.4 bits (80), Expect = 0.066
Identities = 17/43 (39%), Positives = 23/43 (52%), Gaps = 1/43 (2%)
Query: 84 PVVDRKGKGIMRDDKGKGKMIEEEDEDDD-DSDDSDDSDDDSD 125
P +KG GK ++ED D+D D +D DDSD+D D
Sbjct: 119 PTPGKKGAATPAKGAKNGKNAKKEDSDEDEDEEDEDDSDEDED 161
Score = 34.7 bits (78), Expect = 0.11
Identities = 13/31 (41%), Positives = 21/31 (66%)
Query: 95 RDDKGKGKMIEEEDEDDDDSDDSDDSDDDSD 125
++ K K +EDED++D DDSD+ +DD +
Sbjct: 134 KNGKNAKKEDSDEDEDEEDEDDSDEDEDDEE 164
Score = 30.4 bits (67), Expect = 2.1
Identities = 10/34 (29%), Positives = 21/34 (61%)
Query: 88 RKGKGIMRDDKGKGKMIEEEDEDDDDSDDSDDSD 121
+ GK ++D + + E+ED+ D+D DD ++ +
Sbjct: 134 KNGKNAKKEDSDEDEDEEDEDDSDEDEDDEEEDE 167
Score = 28.5 bits (62), Expect = 8.0
Identities = 12/34 (35%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 59 PNNEPENNTDDDDEDDEDEENSDEEPVV-DRKGK 91
P E++ D++ +DED+ + +EE V+ +KGK
Sbjct: 20 PKEVEEDSEDEEMSEDEDDSSGEEEVVIPQKKGK 53
>IFH1_YEAST (P39520) IFH1 protein (RRP3 protein)
Length = 1085
Score = 55.5 bits (132), Expect = 6e-08
Identities = 40/157 (25%), Positives = 69/157 (43%), Gaps = 16/157 (10%)
Query: 3 EPETNNHEEPTFPTKRKPDQEETHHLPNKNPKLTSTTTVDQETELPTTVNSSSDAVPNNE 62
E +T + + P + +P + + + S + ++ T P + + + NN
Sbjct: 33 ESDTKSRQSPPTLSTTRPRRFSLIYSSESSLSDVSDSDKNKSTN-PHKIKRKAKNISNNS 91
Query: 63 PENNTD----DDDEDDEDEENSDEEPVVDRKGKGIMRDDKGKGKMIEEEDEDDDDSDDSD 118
+ D DDE E+SD + V D + + + EEE E++++ DD D
Sbjct: 92 QGKKSKLIQRQIDNDDEGTESSDYQAVTDGE----------ESENEEEESEEEEEDDDED 141
Query: 119 DSDDDSDGNVSGSDSDFSDDPLAEVDLDNILPSRTRR 155
D DDD DG+ S SDS+ S D +D + R +R
Sbjct: 142 DDDDDDDGSDSDSDSETSSDD-ENIDFVKLTAQRKKR 177
Score = 37.4 bits (85), Expect = 0.017
Identities = 38/158 (24%), Positives = 63/158 (39%), Gaps = 11/158 (6%)
Query: 1 MAEPETNNHEEPTFPTKRKPDQEETHHLPNKNPKLTSTTTVDQETELPTTVNSSSDAVPN 60
++ + N E+ K K +Q++ K + TTT Q + N
Sbjct: 207 LSPKKENEEEQKEEKEKEKEEQQKQQESNKKEVNGSGTTTTQQALSFKFKKEDDGISFGN 266
Query: 61 NEPENNTDDDDED---DEDEENSDEEPVVDRKGKGIMRDDKGKGKMIEEEDEDDDDSDDS 117
N D +E E N +EE +D K + +D+ + I E DE + D D
Sbjct: 267 GNEGYNEDIGEEVLDLKNKENNGNEEDKLDSKVM-LGNNDELRFPNISESDESEYDIDQD 325
Query: 118 DDSD----DDSDGNVSGSDSDFSDD--PLAEVDLDNIL 149
D +DS G + G+D + +D P+ E + NI+
Sbjct: 326 AYFDVINNEDSHGEI-GTDLETGEDDLPILEEEEQNIV 362
Score = 37.4 bits (85), Expect = 0.017
Identities = 34/135 (25%), Positives = 53/135 (39%), Gaps = 23/135 (17%)
Query: 5 ETNNHEEPTFPTKRKPDQEETHHLPNKNPKLTSTTTVDQET------------ELPTTVN 52
E N +EE +K + PN + S +DQ+ E+ T +
Sbjct: 286 ENNGNEEDKLDSKVMLGNNDELRFPNISESDESEYDIDQDAYFDVINNEDSHGEIGTDLE 345
Query: 53 SSSDAVP--NNEPENNTDDDDEDDE-------DEENSDEEPVVDRKGKGIMRDDKGKGKM 103
+ D +P E +N + DDE EE SD PV D + K + + +
Sbjct: 346 TGEDDLPILEEEEQNIVSELQNDDELSFDGSIHEEGSD--PVEDAENKFLQNEYNQENGY 403
Query: 104 IEEEDEDDDDSDDSD 118
EE+DE+D+ D D
Sbjct: 404 DEEDDEEDEIMSDFD 418
Score = 30.4 bits (67), Expect = 2.1
Identities = 38/167 (22%), Positives = 64/167 (37%), Gaps = 37/167 (22%)
Query: 8 NHEEPTFPTKRKPDQEETHHLPNKNPKLTSTTTVDQETELPTTVNSSSDAVPN------N 61
+++E F + D E + H K + + ++ + + + S+ D P+ N
Sbjct: 494 DNDEYIFNVFFQSDDENSGHKSKKGRHKSGKSHIEHKNKGSNLIKSNDDLEPSTHSTVLN 553
Query: 62 EPENNTDDDDEDD---------EDEENSDEEPVVDRKGKGIMRDDKGKGKMIEEEDEDDD 112
+ ++ DD+ D+ D+E S+ E D +R I E +DD
Sbjct: 554 SGKYDSSDDEYDNILLDVAHMPSDDECSESETSHDADTDEELRALDSDSLDIGTELDDDY 613
Query: 113 DSDDSD--------DSDD----------DSDGN----VSGSDSDFSD 137
+ DD D D DD DSDG+ S SD + SD
Sbjct: 614 EDDDDDSSVTNVFIDIDDLDPDSFYFHYDSDGSSSLISSNSDKENSD 660
>BA2B_CHICK (Q9DE13) Bromodomain adjacent to zinc finger domain 2B
(Extracellular matrix protein F22)
Length = 2130
Score = 55.1 bits (131), Expect = 8e-08
Identities = 28/86 (32%), Positives = 49/86 (56%), Gaps = 9/86 (10%)
Query: 41 VDQETELPTTVNSSSDAVPNNEPENNTDDDDEDDEDEENSDEEPVVDRKGKGIMRDDKGK 100
V+Q + + SS ++ +N+ +++ +D+DEDDED+++ D + D + D G
Sbjct: 537 VEQFRGVDSDAPSSKESDDSNDDDDDDEDEDEDDEDDDSDDSQSESDSNSES---DTDG- 592
Query: 101 GKMIEEEDEDDDDSDDSDDSDDDSDG 126
EDEDD+D D D+SD D++G
Sbjct: 593 -----SEDEDDEDDKDQDESDTDTEG 613
Score = 52.4 bits (124), Expect = 5e-07
Identities = 27/80 (33%), Positives = 43/80 (53%), Gaps = 14/80 (17%)
Query: 55 SDAVPNNEPENNTDDDDEDDEDEENSDEEPVVDRKGKGIMRDDKGKGKMIEEEDEDDDDS 114
SDA P+++ ++++DDD+DDEDE+ DE DD E + + D+
Sbjct: 545 SDA-PSSKESDDSNDDDDDDEDEDEDDE-------------DDDSDDSQSESDSNSESDT 590
Query: 115 DDSDDSDDDSDGNVSGSDSD 134
D S+D DD+ D + SD+D
Sbjct: 591 DGSEDEDDEDDKDQDESDTD 610
Score = 44.3 bits (103), Expect = 1e-04
Identities = 31/90 (34%), Positives = 41/90 (45%), Gaps = 30/90 (33%)
Query: 58 VPNNEPENNTDDDDEDDEDEENSDEEPVVDRKGKGIMRDDKGKGKMIEEEDEDDDD-SDD 116
V ++ P + DD DD+D++ EDED+DD DD
Sbjct: 543 VDSDAPSSKESDDSNDDDDDD----------------------------EDEDEDDEDDD 574
Query: 117 SDDSDDDSDGNVSGSDSDFSDDPLAEVDLD 146
SDDS +SD N S SD+D S+D E D D
Sbjct: 575 SDDSQSESDSN-SESDTDGSEDEDDEDDKD 603
Score = 43.5 bits (101), Expect = 2e-04
Identities = 23/58 (39%), Positives = 31/58 (52%), Gaps = 1/58 (1%)
Query: 91 KGIMRDDKGKGKMIEEEDEDDDDSD-DSDDSDDDSDGNVSGSDSDFSDDPLAEVDLDN 147
+G+ D + + D+DDDD D D DD DDDSD + S SDS+ D D D+
Sbjct: 541 RGVDSDAPSSKESDDSNDDDDDDEDEDEDDEDDDSDDSQSESDSNSESDTDGSEDEDD 598
Score = 40.0 bits (92), Expect = 0.003
Identities = 21/66 (31%), Positives = 35/66 (52%), Gaps = 8/66 (12%)
Query: 46 ELPTTVNSSSDAVPNNEPENNTDDDDEDDEDEENSDEEPVVDRKGKGIMRDDKGKGKMIE 105
E PT +++ +++ DDD +D DE++ DEE D+KGK K ++ E
Sbjct: 1205 ETPTPGRKRRRKGGDSDYDDDDDDDSDDQADEDDEDEEDKEDKKGK--------KAEVCE 1256
Query: 106 EEDEDD 111
+ED+ D
Sbjct: 1257 DEDDGD 1262
Score = 37.0 bits (84), Expect = 0.023
Identities = 17/63 (26%), Positives = 32/63 (49%)
Query: 52 NSSSDAVPNNEPENNTDDDDEDDEDEENSDEEPVVDRKGKGIMRDDKGKGKMIEEEDEDD 111
+S P + D D DD+D+++SD++ D + + D KGK + E+++D
Sbjct: 1202 HSLETPTPGRKRRRKGGDSDYDDDDDDDSDDQADEDDEDEEDKEDKKGKKAEVCEDEDDG 1261
Query: 112 DDS 114
D +
Sbjct: 1262 DQT 1264
Score = 35.8 bits (81), Expect = 0.050
Identities = 24/91 (26%), Positives = 42/91 (45%), Gaps = 16/91 (17%)
Query: 76 DEENSDEEPVVDRKGKGIMRDDKGKGKMIEEEDEDDDDSDDSDDSDDDSDGNVSG----- 130
+E +S E P RK + KG + +D+DDDDSDD D DD+ + +
Sbjct: 1199 EEPHSLETPTPGRKRRR-------KGGDSDYDDDDDDDSDDQADEDDEDEEDKEDKKGKK 1251
Query: 131 ----SDSDFSDDPLAEVDLDNILPSRTRRRT 157
D D D ++ +L+ + T++++
Sbjct: 1252 AEVCEDEDDGDQTVSVEELEKQIEKLTKQQS 1282
Score = 32.7 bits (73), Expect = 0.43
Identities = 32/141 (22%), Positives = 53/141 (36%), Gaps = 5/141 (3%)
Query: 4 PETNNHEEPTFPTKRKPDQEETHHLPNKNPKLTSTTTVDQETELPTTVNSSSDAVPNNEP 63
P NH+ F + N L +T + + T+V S+S A +
Sbjct: 85 PPAQNHDSTPFHPRTTGKNNRGSLEKGINGSLNGNSTT-AASAISTSVLSTSIATSAGQV 143
Query: 64 ENNTDDDDEDDEDEENSDEEPVVDRKGKGIMRDDKGKGKMIEEEDEDDDDSDDSDDSDDD 123
+ T ++E + + + R K ++D K + K +E + DSD SD
Sbjct: 144 KVVTSGAGGRKYNQEQNKVQLLDTRADK--IKDKKPRKKAVESSS--NSDSDSGSSSDTS 199
Query: 124 SDGNVSGSDSDFSDDPLAEVD 144
S+G S D +D E D
Sbjct: 200 SEGISSSDSDDLEEDEEEEED 220
Score = 30.0 bits (66), Expect = 2.8
Identities = 16/82 (19%), Positives = 34/82 (40%), Gaps = 1/82 (1%)
Query: 47 LPTTVNSSSDAVPNNEPENNTDDDDEDDEDEENSDEEPVVDRKGKGIMRDDKGKGKMIEE 106
L T + D P + ++ + D D ++ E + + D++ + E
Sbjct: 165 LDTRADKIKDKKPRKKAVESSSNSDSDSGSSSDTSSEGISSSDSDDLEEDEEEEEDQSAE 224
Query: 107 EDEDDDDSDDSDDSDDDSDGNV 128
E EDD +SD +++ ++ V
Sbjct: 225 ESEDD-ESDSENEAHHENKNKV 245
Score = 28.9 bits (63), Expect = 6.1
Identities = 20/76 (26%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
Query: 41 VDQETELPTTVNSSSDAVPNNEPENNTDDDDEDDEDEEN-SDEEPVVDRKGKGIMRDDKG 99
V+ + + SSSD +++DD +ED+E+EE+ S EE D +
Sbjct: 182 VESSSNSDSDSGSSSDTSSEGISSSDSDDLEEDEEEEEDQSAEESEDDESDSENEAHHEN 241
Query: 100 KGKMIEEEDEDDDDSD 115
K K++ D +D
Sbjct: 242 KNKVLMHSGVKDMKTD 257
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.298 0.124 0.340
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,715,716
Number of Sequences: 164201
Number of extensions: 1365329
Number of successful extensions: 31169
Number of sequences better than 10.0: 1615
Number of HSP's better than 10.0 without gapping: 939
Number of HSP's successfully gapped in prelim test: 711
Number of HSP's that attempted gapping in prelim test: 8497
Number of HSP's gapped (non-prelim): 8212
length of query: 172
length of database: 59,974,054
effective HSP length: 102
effective length of query: 70
effective length of database: 43,225,552
effective search space: 3025788640
effective search space used: 3025788640
T: 11
A: 40
X1: 17 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 44 (21.9 bits)
S2: 62 (28.5 bits)
Medicago: description of AC133780.10