BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC130807.11 - phase: 0
(261 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SMC_BACSU (P51834) Chromosome partition protein smc 46 1e-04
CENF_HUMAN (P49454) CENP-F kinetochore protein (Centromere prote... 42 0.001
GOB1_HUMAN (Q14789) Golgi autoantigen, golgin subfamily B member... 42 0.001
SMC2_YEAST (P38989) Structural maintenance of chromosome 2 (DA-b... 41 0.003
USO1_YEAST (P25386) Intracellular protein transport protein USO1 40 0.006
YJ9C_YEAST (P47166) Hypothetical 81.2 kDa protein in NMD5-HOM6 i... 40 0.007
MYS2_DICDI (P08799) Myosin II heavy chain, non muscle 39 0.010
DRS1_YEAST (P32892) Probable ATP-dependent RNA helicase DRS1 39 0.010
CC12_SCHPO (Q10059) Cell division control protein 12 39 0.010
YY08_METJA (Q60307) Hypothetical protein MJECS08 39 0.013
TIG_BUCAI (P57546) Trigger factor (TF) 39 0.013
M22_STRPY (P50469) M protein, serotype 2.2 precursor 39 0.013
A60D_DROME (P91927) Calcium-binding mitochondrial protein Anon-60Da 39 0.013
YG6P_CAEEL (P90970) Hypothetical protein T23G11.8 in chromosome I 39 0.017
MYPS_MYTGA (O96064) Paramyosin 38 0.028
SCP1_RAT (Q03410) Synaptonemal complex protein 1 (SCP-1 protein) 37 0.037
SMY1_YEAST (P32364) Kinesin-related protein SMY1 (Suppressor pro... 37 0.048
PCP1_SCHPO (Q92351) Spindle pole body protein pcp1 37 0.048
MLP2_YEAST (P40457) MLP2 protein (Myosin-like protein 2) 37 0.048
DESP_HUMAN (P15924) Desmoplakin (DP) (250/210 kDa paraneoplastic... 37 0.048
>SMC_BACSU (P51834) Chromosome partition protein smc
Length = 1186
Score = 45.8 bits (107), Expect = 1e-04
Identities = 45/166 (27%), Positives = 87/166 (52%), Gaps = 23/166 (13%)
Query: 6 KKLYSKYTTLKTNKLSELEDVHKEQELKFLKFVSAAEDVIDHLRTENDKLLGQINDLGNE 65
+KL+ K++TLK E + KE+EL +SA E I+ R + L +N+L
Sbjct: 235 EKLHGKWSTLK-----EKVQMAKEEELAESSAISAKEAKIEDTRDKIQALDESVNELQQV 289
Query: 66 LTSVRVAKDNELVEHKRLLLEEKKKN-----EALFEEVEKLQK---LLKEGTSGDLSNRK 117
L + +++ E +E ++ +L+E+KKN E L E + + Q+ +LKE +LS ++
Sbjct: 290 L--LVTSEELEKLEGRKEVLKERKKNAVQNQEQLEEAIVQFQQKETVLKE----ELSKQE 343
Query: 118 VVNNTSNNSSIRMTRKRMRQEQDALDIEARCIPSENEGVDTQESDH 163
V T + ++ R +++++Q AL + + E ++ +SD+
Sbjct: 344 AVFETL-QAEVKQLRAQVKEKQQALSLHNENV---EEKIEQLKSDY 385
>CENF_HUMAN (P49454) CENP-F kinetochore protein (Centromere protein F)
(Mitosin) (AH antigen)
Length = 3210
Score = 42.4 bits (98), Expect = 0.001
Identities = 37/161 (22%), Positives = 75/161 (45%), Gaps = 21/161 (13%)
Query: 9 YSKYTTLKTNKLSELEDVHKEQELKFLKFV----SAAEDVIDHLRTENDKLLGQINDLGN 64
++ Y + +SEL D +K+++L L+ +A ED+ + +K ++ L N
Sbjct: 1000 FANYIDEREKSISELSDQYKQEKLILLQRCEETGNAYEDLSQKYKAAQEKN-SKLECLLN 1058
Query: 65 ELTSVRVAKDNELVEHKRLLLEE-----------KKKNEALFEEVEKLQKLLKEGTSGDL 113
E TS+ + NEL + K +E +++N+ L E+E +Q+ L+ + +
Sbjct: 1059 ECTSLCENRKNELEQLKEAFAKEHQEFLTKLAFAEERNQNLMLELETVQQALRSEMTDNQ 1118
Query: 114 SNRKVVNNTSNNSSIRMTRKRMRQEQDALDIEARCIPSENE 154
+N K S ++ +++EQ+ + E + ENE
Sbjct: 1119 NNSK-----SEAGGLKQEIMTLKEEQNKMQKEVNDLLQENE 1154
Score = 37.4 bits (85), Expect = 0.037
Identities = 38/148 (25%), Positives = 66/148 (43%), Gaps = 13/148 (8%)
Query: 39 SAAEDVIDHLRTENDKLLGQINDLGNELTSVRVAKDNELVEHKRLLLEEKKKNEALFEEV 98
S+ ED+ D++ ND + D+ NEL+ +R K + +EH+ L LE EV
Sbjct: 1973 SSREDIGDNVAKVNDSWKERFLDVENELSRIRSEKAS--IEHEALYLEADL-------EV 2023
Query: 99 EKLQKLLKEGTSGDLSNRKVVNNTSNNSSIRMTRKRMRQEQDALDIEARCIP--SENEGV 156
+ +KL E + + +V S + R ++R E D + + + SE
Sbjct: 2024 VQTEKLCLE-KDNENKQKVIVCLEEELSVVTSERNQLRGELDTMSKKTTALDQLSEKMKE 2082
Query: 157 DTQE-SDHQNWLVHALFEYTLDMKLSTD 183
TQE HQ+ +H + ++K T+
Sbjct: 2083 KTQELESHQSECLHCIQVAEAEVKEKTE 2110
Score = 30.0 bits (66), Expect = 5.9
Identities = 37/178 (20%), Positives = 80/178 (44%), Gaps = 23/178 (12%)
Query: 1 MEALYKKLYSKYTTLKTNKLSELEDVHK------EQELKFLKFVSAAEDVIDHLRTENDK 54
+++ YK L ++ K +K+S +E V+K E + + + ++ + L E ++
Sbjct: 2682 LQSSYKNLENELELTKMDKMSFVEKVNKMTAKETELQREMHEMAQKTAELQEELSGEKNR 2741
Query: 55 LLGQINDLGNELTSVRVAKDNELVEHKRLLLEEKKKNEAL----FEEVEKLQKLLKEGTS 110
L G++ L L ++ +KD + K L LE + ++L ++VEK K+ +E
Sbjct: 2742 LAGELQLL---LEEIKSSKD----QLKELTLENSELKKSLDCMHKDQVEKEGKVREEIAE 2794
Query: 111 GDLSNRKVVNNTSNNSSIRMTRKRMRQE----QDALDIEARCIPSENEGVDTQESDHQ 164
L + + + + T K+ E ++ L + C+ S+ +D +S +
Sbjct: 2795 YQLRLHEA--EKKHQALLLDTNKQYEVEIQTYREKLTSKEECLSSQKLEIDLLKSSKE 2850
>GOB1_HUMAN (Q14789) Golgi autoantigen, golgin subfamily B member 1
(Giantin) (Macrogolgin) (Golgi complex-associated
protein, 372-kDa) (GCP372)
Length = 3259
Score = 42.0 bits (97), Expect = 0.001
Identities = 39/166 (23%), Positives = 70/166 (41%), Gaps = 20/166 (12%)
Query: 6 KKLYSKYTTLKTNK------LSELEDVHKEQELKFLKFVSAAEDVIDHLRTENDKLLGQI 59
++LY K + + NK L E E +E + K KF + + I L END+L ++
Sbjct: 1644 QELYGKLRSTEANKKETEKQLQEAEQEMEEMKEKMRKFAKSKQQKILELEEENDRLRAEV 1703
Query: 60 NDLGN-------ELTSVRVAKDNELVEHKRLLLEEKKKNEALFEEVEKLQKLLKEGTSGD 112
+ G+ L S + EL K KK ++L E + L + +++
Sbjct: 1704 HPAGDTAKECMETLLSSNASMKEELERVKMEYETLSKKFQSLMSEKDSLSEEVQD----- 1758
Query: 113 LSNRKVVNNTSNNSSIRMTRKRMRQEQDALDIEARCIPSENEGVDT 158
++ +N S +++ T K Q + + + IP E E D+
Sbjct: 1759 -LKHQIEDNVSKQANLEATEKHDNQ-TNVTEEGTQSIPGETEEQDS 1802
Score = 38.9 bits (89), Expect = 0.013
Identities = 36/179 (20%), Positives = 89/179 (49%), Gaps = 20/179 (11%)
Query: 6 KKLYSKYTTLKTNKLSEL---EDVHKEQELKFLKFVSAAEDV----------IDHLRTEN 52
+KL + +LK++K++E ++ HKE + ++ + + E+V ++ +R E
Sbjct: 1584 EKLVKEIESLKSSKIAESTEWQEKHKELQKEYEILLQSYENVSNEAERIQHVVEAVRQEK 1643
Query: 53 DKLLGQIN--DLGNELTSVRVAKDNELVEHKRLLLEE--KKKNEALFEEVEKLQKLLKE- 107
+L G++ + + T ++ + + +E + + + K K + + E E+ +L E
Sbjct: 1644 QELYGKLRSTEANKKETEKQLQEAEQEMEEMKEKMRKFAKSKQQKILELEEENDRLRAEV 1703
Query: 108 GTSGDLSNRKVVNNTSNNSSIRMTRKRMRQEQDALDIEARCIPSENEGV--DTQESDHQ 164
+GD + + S+N+S++ +R++ E + L + + + SE + + + Q+ HQ
Sbjct: 1704 HPAGDTAKECMETLLSSNASMKEELERVKMEYETLSKKFQSLMSEKDSLSEEVQDLKHQ 1762
Score = 35.4 bits (80), Expect = 0.14
Identities = 27/116 (23%), Positives = 55/116 (47%), Gaps = 4/116 (3%)
Query: 5 YKKLYSKYTTLKTNKLSELEDVHKEQELKFLKFVSAAEDVIDHLRTENDKLLGQINDLGN 64
Y++L ++ ++ K +++ E K + + +D L +EN KL ++
Sbjct: 2480 YQQLEERHLSIILEKDQLIQEAAAENN-KLKEEIRGLRSHMDDLNSENAKLDAELIQYRE 2538
Query: 65 ELTSVRVAKDNELVEHKRLLLEEKKKNEALFEEVEKLQKLLKEGTSGDLSNRKVVN 120
+L V KD+ + K+LL + ++N+ L + KL++ LKE + R+ N
Sbjct: 2539 DLNQVITIKDS---QQKQLLEVQLQQNKELENKYAKLEEKLKESEEANEDLRRSFN 2591
Score = 31.2 bits (69), Expect = 2.6
Identities = 32/120 (26%), Positives = 52/120 (42%), Gaps = 3/120 (2%)
Query: 4 LYKKLYSKYTTLKTNK-LSELEDVHKEQELKFLKFVSAAEDVIDHLRTENDKLLGQINDL 62
L L S+ LK NK L E + + + K ++ E + E D +LG++ L
Sbjct: 1485 LQAALISRKEALKENKSLQEELSLARGTIERLTKSLADVESQVSAQNKEKDTVLGRLALL 1544
Query: 63 GNELTSVRVAKDNELVEHKRLLLEEKKKNEALFEEVEKLQKLLKEGTSGDLSNRKVVNNT 122
E + D L+E++ L + AL E +KL+KE S L + K+ +T
Sbjct: 1545 QEERDKLITEMDRSLLENQSLSSSCESLKLALEGLTEDKEKLVKEIES--LKSSKIAEST 1602
Score = 30.8 bits (68), Expect = 3.5
Identities = 40/188 (21%), Positives = 88/188 (46%), Gaps = 13/188 (6%)
Query: 19 KLSELEDV--HKEQELKFLKF-VSAAEDVIDHLRTENDKLLGQINDLGNELTSVRVAKDN 75
KL EL+ + KE+++ +L +S E + ++TE + I L +L D
Sbjct: 1393 KLDELQKLISKKEEDVSYLSGQLSEKEAALTKIQTEIIEQEDLIKALHTQLEMQAKEHDE 1452
Query: 76 ELVEHKRLLLEEKKKNEALFEEVEKLQKLLKEGTSGDLSNRKVV-NNTSNNSSIRMTRKR 134
+ + + L E K+K E + EE Q++ ++ + +S ++ + N S + + R
Sbjct: 1453 RIKQLQVELCEMKQKPEEIGEESRAKQQIQRKLQAALISRKEALKENKSLQEELSLARGT 1512
Query: 135 M-RQEQDALDIEARCIPSENEGVDT------QESDHQNWLVHALFEYTLD-MKLSTDCQT 186
+ R + D+E++ + ++N+ DT + ++ L+ + L+ LS+ C++
Sbjct: 1513 IERLTKSLADVESQ-VSAQNKEKDTVLGRLALLQEERDKLITEMDRSLLENQSLSSSCES 1571
Query: 187 GRLCLSAM 194
+L L +
Sbjct: 1572 LKLALEGL 1579
>SMC2_YEAST (P38989) Structural maintenance of chromosome 2 (DA-box
protein SMC2)
Length = 1170
Score = 41.2 bits (95), Expect = 0.003
Identities = 43/163 (26%), Positives = 79/163 (48%), Gaps = 35/163 (21%)
Query: 22 ELEDVHKEQELKFLKFVSAAEDVIDHLRTENDKLLGQIND----LGNELTSVRVAK---- 73
ELE+ E E K+ D+ +L E ++L +++ L N L S+ K
Sbjct: 806 ELEEQESESERKY--------DLFQNLELETEQLSSELDSNKTLLHNHLKSIESLKLENS 857
Query: 74 ---------DNELVEHKRLLLEEKKKNEALFEEVEKLQKLLK----EGTSGDLSNRKVVN 120
+++LV + L EEKK+ + +E+ +L+ L+K E S +L +K+V+
Sbjct: 858 DLEGKIRGVEDDLVTVQTELNEEKKRLMDIDDELNELETLIKKKQDEKKSSELELQKLVH 917
Query: 121 N----TSNNSSIRMTRKRMRQEQDAL-DIE-ARCIPSENEGVD 157
+ SN +++ + +RQ+ + L D + R I +NEG+D
Sbjct: 918 DLNKYKSNTNNMEKIIEDLRQKHEFLEDFDLVRNIVKQNEGID 960
>USO1_YEAST (P25386) Intracellular protein transport protein USO1
Length = 1790
Score = 40.0 bits (92), Expect = 0.006
Identities = 36/142 (25%), Positives = 68/142 (47%), Gaps = 12/142 (8%)
Query: 16 KTNKLSELEDVHKEQE---LKFLKFVSAAEDVIDHLRTENDKLLGQINDLGNELTSVRVA 72
K ++SELED K E K+L+ +E + + L + +L Q+ + N L+ +
Sbjct: 1270 KEKEVSELEDKLKASEDKNSKYLELQKESEKIKEELDAKTTELKIQLEKITN-LSKAKEK 1328
Query: 73 KDNELVEHKRLLLEEKKKNEALFEEVEKLQKLLKEGTSGDLSNRKVVNNTSNNSSIRMTR 132
++EL K+ EE+K E E++EKL+ ++ RK++N S+ + +
Sbjct: 1329 SESELSRLKKTSSEERKNAE---EQLEKLKNEIQIKNQAFEKERKLLNEGSSTITQEYSE 1385
Query: 133 KRMRQEQDALDIEARCIPSENE 154
K E + + ++ +ENE
Sbjct: 1386 KINTLEDELIRLQ-----NENE 1402
Score = 34.3 bits (77), Expect = 0.31
Identities = 33/157 (21%), Positives = 70/157 (44%), Gaps = 20/157 (12%)
Query: 4 LYKKLYSKYTTLKTNKLSELEDVHKEQELKFLKFVSAAEDVIDHLRTENDKLLGQINDLG 63
+ KKL S + +T S +E + K E K + +AE+ I +L+ E L+ +IN+
Sbjct: 1506 MMKKLESTIESNETELKSSMETIRKSDE-KLEQSKKSAEEDIKNLQHEKSDLISRINESE 1564
Query: 64 NELTSV--------RVAKDNELVEHKRLLLEEK-----KKNEALFEEVEKLQKLLKEGTS 110
++ + + + E V+ + +EK ++N L ++E +++ LK+
Sbjct: 1565 KDIEELKSKLRIEAKSGSELETVKQELNNAQEKIRINAEENTVLKSKLEDIERELKD--- 1621
Query: 111 GDLSNRKVVNNTSNNSSIRMTRKRMRQEQDALDIEAR 147
++ +N + K + QE D+ +A+
Sbjct: 1622 ---KQAEIKSNQEEKELLTSRLKELEQELDSTQQKAQ 1655
Score = 34.3 bits (77), Expect = 0.31
Identities = 39/150 (26%), Positives = 65/150 (43%), Gaps = 10/150 (6%)
Query: 19 KLSELEDVHKEQELKFLKFVSAAEDVIDHLRTEN-DKLLGQINDLGNELTSVRVAKDNEL 77
K + +V+ ++E K LK AA+ EN +++ Q N+L E + EL
Sbjct: 888 KEKDKSNVNHQKETKSLKEDIAAKITEIKAINENLEEMKIQCNNLSKEKEHI----SKEL 943
Query: 78 VEHKRLLLEEKKKNEALFEEVEKLQKLLKEGTSGDLSNRKVVNNTSNNSSIRMTRKR--- 134
VE+K L E+++ L K+ + + S K V + N SSI+++ +
Sbjct: 944 VEYKSRFQSHDNLVAKLTEKLKSLANNYKDMQAENESLIKAVEESKNESSIQLSNLQNKI 1003
Query: 135 --MRQEQDALDIEARCIPSENEGVDTQESD 162
M QE++ IE I E + SD
Sbjct: 1004 DSMSQEKENFQIERGSIEKNIEQLKKTISD 1033
Score = 32.7 bits (73), Expect = 0.91
Identities = 37/149 (24%), Positives = 63/149 (41%), Gaps = 16/149 (10%)
Query: 18 NKLSELEDVHKEQELKFLKFVSAAEDVIDHLRTENDKLLGQINDLGNELTSVRVAKDNEL 77
N +ELE + E K LK V E+ HL+ E +L + + +L S+R ++
Sbjct: 1096 NLKNELETKLETSE-KALKEVKENEE---HLKEEKIQLEKEATETKQQLNSLRANLESLE 1151
Query: 78 VEHKRLLLEEKKKNEALFEEV----EKLQKLLKEGTSGDLSNRKVVNNTSNNSSIRMTRK 133
EH+ L + KK E + + E++ +L E TS N + K
Sbjct: 1152 KEHEDLAAQLKKYEEQIANKERQYNEEISQLNDEITSTQQENESIKKKNDELEGEVKAMK 1211
Query: 134 RMRQEQ--------DALDIEARCIPSENE 154
+EQ DAL+++ + + +NE
Sbjct: 1212 STSEEQSNLKKSEIDALNLQIKELKKKNE 1240
Score = 30.0 bits (66), Expect = 5.9
Identities = 37/151 (24%), Positives = 65/151 (42%), Gaps = 16/151 (10%)
Query: 17 TNKLSELEDVHKEQELKFLKFVSAAEDVIDH---LRTENDKLLGQINDLGNELTSVRVAK 73
T KL L + HKE + K+ S+ + ++ L TE L + D +E+T +R
Sbjct: 761 TEKLIALTNEHKELDEKYQILNSSHSSLKENFSILETE----LKNVRDSLDEMTQLRDVL 816
Query: 74 DNELVEHKRLLLEEKKKNEALFEEVEKLQKLLKEGTSGDLSNRKVVNNTSNNSSIRMTRK 133
+ + E++ LLE K + + E K L++G LS +K + N +M +
Sbjct: 817 ETKDKENQTALLEYK----STIHKQEDSIKTLEKGLETILSQKKKAEDGIN----KMGKD 868
Query: 134 RMRQEQDALDIEARCIPSENEGVDTQESDHQ 164
++ +E C + E D +HQ
Sbjct: 869 LFALSREMQAVEENCKNLQKE-KDKSNVNHQ 898
>YJ9C_YEAST (P47166) Hypothetical 81.2 kDa protein in NMD5-HOM6
intergenic region
Length = 707
Score = 39.7 bits (91), Expect = 0.007
Identities = 43/199 (21%), Positives = 87/199 (43%), Gaps = 19/199 (9%)
Query: 1 MEALYKKLYSKYTTLK------TNKLSELEDVHKEQELKFLKFVSAAEDVIDHLRTENDK 54
+E L K++ +Y L TN+L+ + + + F K + +D+ID LR E K
Sbjct: 122 VEELVKEISPEYLRLNKQIDDLTNELNRKSQI-ETTDSSFFKLIKEKDDLIDQLRKEGAK 180
Query: 55 LLGQINDLGNELTSVRVAKDNELVEHKRLLLEEKKKNEALFEEVEKLQKL--LKEGTSGD 112
L N++ ++R + K L E + N++ + VE +L L G
Sbjct: 181 LAETELRQSNQIKALR-------TKVKDLEYEVSELNDSSAQSVENYNELQSLYHNIQGQ 233
Query: 113 L--SNRKVVNNTSNNSSIRMTRKRMRQEQDALDIEARCIPSENEGVDTQESDHQNWLVHA 170
L + K+ + S+ K ++++ D + I + + + ++ ++S+ Q A
Sbjct: 234 LAEATNKLKDADKQKESLETLEKNIKEKDDLITILQQSLDNMRTLLEKEKSEFQT-EKKA 292
Query: 171 LFEYTLDMKLSTDCQTGRL 189
L E T+D + + + +L
Sbjct: 293 LQEATVDQVTTLETKLEQL 311
>MYS2_DICDI (P08799) Myosin II heavy chain, non muscle
Length = 2116
Score = 39.3 bits (90), Expect = 0.010
Identities = 34/146 (23%), Positives = 71/146 (48%), Gaps = 12/146 (8%)
Query: 26 VHKEQELKFLKF-VSAAEDVIDHLRTENDKLLGQINDLGNELTSVRVAKDNELVEHKRLL 84
V +E +++ L+ +S + I L L G++ L EL + ++AK N + K++
Sbjct: 1146 VKQESDMEALRNQISELQSTIAKLEKIKSTLEGEVARLQGELEAEQLAKSNVEKQKKKVE 1205
Query: 85 LEEKKKNEALFEE------VEKLQKLLKE-----GTSGDLSNRKVVNNTSNNSSIRMTRK 133
L+ + K+ L EE ++KL+K L++ T +N K VN+ S N + +
Sbjct: 1206 LDLEDKSAQLAEETAAKQALDKLKKKLEQELSEVQTQLSEANNKNVNSDSTNKHLETSFN 1265
Query: 134 RMRQEQDALDIEARCIPSENEGVDTQ 159
++ E +A + + + G++++
Sbjct: 1266 NLKLELEAEQKAKQALEKKRLGLESE 1291
Score = 32.7 bits (73), Expect = 0.91
Identities = 39/168 (23%), Positives = 68/168 (40%), Gaps = 23/168 (13%)
Query: 6 KKLYSKYTTLKTNKLSELEDVHKEQELKFLKFVSAAEDVIDHLRTENDKLLGQIND---- 61
+KL + LK ELE++ + + + +S E + D L+ E ++L ++
Sbjct: 939 QKLRNTLEKLKKKYEEELEEMKRVNDGQS-DTISRLEKIKDELQKEVEELTESFSEESKD 997
Query: 62 ----------LGNELTSVRVAKDNELVEHKRLLLEEKKKNEALFEEVEKL-----QKLLK 106
L +EL + V D+E + LL ++KK E L + E L KL +
Sbjct: 998 KGVLEKTRVRLQSELDDLTVRLDSETKDKSELLRQKKKLEEELKQVQEALAAETAAKLAQ 1057
Query: 107 EGTSGDLSNRKVVNNTSNNSSIRMTRKRMRQEQDALDIEARCIPSENE 154
E + L N NS + R E+ +E++ + NE
Sbjct: 1058 EAANKKLQGEYTELNEKFNSEV---TARSNVEKSKKTLESQLVAVNNE 1102
>DRS1_YEAST (P32892) Probable ATP-dependent RNA helicase DRS1
Length = 752
Score = 39.3 bits (90), Expect = 0.010
Identities = 32/111 (28%), Positives = 52/111 (46%), Gaps = 20/111 (18%)
Query: 51 ENDKLLGQINDLGNELTSVRVAKDNELVEHKR-----LLLEEKKKNEALFEEVE--KLQK 103
E +K L Q LG + V++ + N+LVE +L+EEK++ E L E++ K +
Sbjct: 601 EENKSLTQGKALGRNVDWVQIEETNKLVESMNDTIEDILVEEKEEKEILRAEMQLRKGEN 660
Query: 104 LLKEG-------------TSGDLSNRKVVNNTSNNSSIRMTRKRMRQEQDA 141
+LK + D N KV+ S N + ++KR R+E A
Sbjct: 661 MLKHKKEIQARPRRTWFQSESDKKNSKVLGALSRNKKVTNSKKRKREEAKA 711
>CC12_SCHPO (Q10059) Cell division control protein 12
Length = 1841
Score = 39.3 bits (90), Expect = 0.010
Identities = 35/137 (25%), Positives = 67/137 (48%), Gaps = 12/137 (8%)
Query: 35 LKFVSAAEDVIDHLRTENDKLLGQINDLGNELTSVRVAKDNELVEHKRLLLEEKKKNEAL 94
LK A+ + + + E D + Q+N LG E ++ K+ E + K ++L +K+ NE L
Sbjct: 648 LKEAKASRAMAEKMVIERDAMAAQVN-LGAEDLIAKLNKEVE--DQKDVILSQKRTNETL 704
Query: 95 FEEVEKLQKL-LKEGTSGDLSNRK---VVNNTSNNSSIRMTRKRMRQEQDALDIEARCIP 150
E++ LQK + + ++ R+ ++N+ S S + + D LD+ + I
Sbjct: 705 KTEIDALQKSHVTQIQRSEVELRELYLLINSDSFQGSTNSKERIIEYLLDKLDLRKKEIA 764
Query: 151 SE-----NEGVDTQESD 162
+E N+G+D + D
Sbjct: 765 AESTLWSNDGIDDKLRD 781
>YY08_METJA (Q60307) Hypothetical protein MJECS08
Length = 1064
Score = 38.9 bits (89), Expect = 0.013
Identities = 41/158 (25%), Positives = 74/158 (45%), Gaps = 16/158 (10%)
Query: 8 LYSKYTTLKTNKLSELEDVHKEQELKFLKFVSAAEDVIDHLRTENDKLLGQINDLGNELT 67
L+ Y+ N++ + + + LKF ++V EDV D L+ +LG +
Sbjct: 915 LFKGYSDRLFNQIEYMAKAYAK--LKFKEYVDL-EDVRDALKIWFKTILGVL-------- 963
Query: 68 SVRVAKDNELVEHKRLLLEEKKKNEALFEEVEKLQKLLKEGTSGDLSNRKVVNNTSNNSS 127
+R+ +++ E +L+ EE K+ + EE+E++ KL++E R+++N N
Sbjct: 964 -LRIKAPDKVKEIFKLVGEEIKETQQKDEELEEINKLIEESRKLSQLKREILNYMLQNPK 1022
Query: 128 IRMTRKRMRQEQDALDIEARCIPSE---NEGVDTQESD 162
I T + + + + AR I E N VD ESD
Sbjct: 1023 I-YTTVEIAENFNISEDTARGILKELWKNGDVDNPESD 1059
>TIG_BUCAI (P57546) Trigger factor (TF)
Length = 442
Score = 38.9 bits (89), Expect = 0.013
Identities = 36/185 (19%), Positives = 82/185 (43%), Gaps = 30/185 (16%)
Query: 6 KKLYSKYTTLKTNKLSELEDVHKEQELKFLKFVSAAEDVIDHLRTENDKLLG------QI 59
K + + Y T+K N S++ + K+L+ +I + +N LL +I
Sbjct: 262 KTIQTDYQTIKNNLHSQINIITD----KYLE-----NQIIQKIVEKNILLLPPLLFQKEI 312
Query: 60 NDLGNELTSVRVAKDNELVEHK---------------RLLLEEKKKNEALFEEVEKLQKL 104
+L + T +++ ++E K ++++E+ N LF + +QKL
Sbjct: 313 KNLYKQYTKQYQEENSNILEKKYHMSLDSEVKKRLYFQIIIEQIILNNKLFADENNIQKL 372
Query: 105 LKEGTSGDLSNRKVVNNTSNNSSIRMTRKRMRQEQDALDIEARCIPSENEGVDTQESDHQ 164
+K+ +S + +++ + N +++ T K + E+ A+ + + I E + + + +
Sbjct: 373 IKKISSNYKNPMEIIKLYNKNKNLKNTMKNIELERQAMLLLKKSIKIEKQNWNFERFLNY 432
Query: 165 NWLVH 169
NW H
Sbjct: 433 NWASH 437
>M22_STRPY (P50469) M protein, serotype 2.2 precursor
Length = 372
Score = 38.9 bits (89), Expect = 0.013
Identities = 39/164 (23%), Positives = 73/164 (43%), Gaps = 26/164 (15%)
Query: 9 YSKYTTLKTNKLSELEDVHKEQELKFLKFVSAAEDVIDHLRTENDKLLGQINDLGNELTS 68
Y + + K +LE ++KE + K +D ID L E + L + T
Sbjct: 77 YLEKINAEEEKNKKLEAINKELNENYYKL----QDGIDALEKEKEDL---------KTTL 123
Query: 69 VRVAKDNELVEHKRLLLEE--------KKKNEALFEEVEKLQKLLKEGTSGDLSNRKVVN 120
+ K+NE+ E R L KK+ EA +++E K L EG ++RK ++
Sbjct: 124 AKTTKENEISEASRKGLSRDLEASRTAKKELEAKHQKLEAENKKLTEGNQVSEASRKGLS 183
Query: 121 NTSNNSSIRMTRKRMRQEQDALDIEARCIPSENEGVDTQESDHQ 164
N S R +K + + L+ + + + ++++ + E+D+Q
Sbjct: 184 NDLEAS--RAAKKELEAKYQKLETDHQALEAKHQKL---EADYQ 222
>A60D_DROME (P91927) Calcium-binding mitochondrial protein Anon-60Da
Length = 1013
Score = 38.9 bits (89), Expect = 0.013
Identities = 56/236 (23%), Positives = 103/236 (42%), Gaps = 17/236 (7%)
Query: 18 NKLSELEDVHKEQELKFLKFVSAAEDVI-DHLRTEND--KLLGQINDLGNELTSVRVAKD 74
N + L++ E LK ++ V D D + T ND K+L I +L+ + +
Sbjct: 758 NNIKVLKETSDEARLKHIEAVLEKFDADKDGVVTVNDIRKVLESIGRDNIKLSDKAIEEL 817
Query: 75 NELVEHKRLLLEEKKKNEALFEEVEKLQKLLKEGTSGDLSNRKVVNNTSNNS-SIRMTRK 133
L++ +++L E+K +A+ + +++ +KL E D K+VN+ +++ I+
Sbjct: 818 ISLLDKEQVLQAEQKIEKAIAKSMKEAEKLKSEVDKADKDLSKLVNDIHDSAKEIQDIAN 877
Query: 134 RMRQEQDALDIEARCIPSENEGVDTQES--DHQNWLVHALFEYTLDMKLSTDCQTGR--L 189
MR +++ + +A+ + +E DT ++ D+ L + D K T TG
Sbjct: 878 EMRDKEETVPDKAKELKAEPAFKDTAKTLKDNAKDLDDLAKDPKSDPKSPTKASTGSGPA 937
Query: 190 CLSAMHQSSGYSFSISWISRAPGEEAELLYHVLSLGTLERLAPEWMREDIMFSPTM 245
LS SSG S A G E + +E++ P DI PT+
Sbjct: 938 GLSGGGPSSGSS------GIATGSTTESALREAAERQMEKILPS---TDIGLPPTI 984
>YG6P_CAEEL (P90970) Hypothetical protein T23G11.8 in chromosome I
Length = 530
Score = 38.5 bits (88), Expect = 0.017
Identities = 37/154 (24%), Positives = 70/154 (45%), Gaps = 2/154 (1%)
Query: 15 LKTNKLSELE-DVHKEQELKFLKFVSAAEDVIDHLRTENDKLLGQINDLGNELTSVRVAK 73
++ K+S E D +E +L K E ++ K++G ++ + +R+AK
Sbjct: 180 VENQKVSSHEMDSLQELKLARQKAQDQKEKAVEECNMHKRKIVGLEEEIRAMVEQLRLAK 239
Query: 74 DNELVEHKRLLLEEKKKNEALFEEVEKLQKLLKEGTSGDLSNRKVVNNTSNNSSIRMTRK 133
N L E+K+ E K K + + EKL + LK S+R V + IR+ R
Sbjct: 240 FN-LNENKKEFDEYKNKAQKILTAKEKLVESLKSEQGIGSSDRPVHLLQAEVEEIRVERD 298
Query: 134 RMRQEQDALDIEARCIPSENEGVDTQESDHQNWL 167
+ + ++ ++ + S+ E ++ Q D Q+ L
Sbjct: 299 LTKADLESAQLQVYTLRSDMEELEAQIRDLQSQL 332
>MYPS_MYTGA (O96064) Paramyosin
Length = 864
Score = 37.7 bits (86), Expect = 0.028
Identities = 39/170 (22%), Positives = 68/170 (39%), Gaps = 21/170 (12%)
Query: 1 MEALYKKLYSKYTTLKTNKLSELEDVHKEQELKFLKFVSAAEDVIDHLRTENDKLLGQIN 60
+ A Y L +KY K ELE++ + +K + ED + LRT + L N
Sbjct: 289 LSATYAALKTKYDKELMAKQEELEEIRRRLSIK----IQELEDTCEQLRTRCNTLEKTKN 344
Query: 61 DLGNELTSVRVAKDNELVEHKRLLLEEKKKNEALFEEVEKLQKLLKEGTSGDLSNRKVVN 120
L E+ + + +N + ++ + K+N L E LQK DLS
Sbjct: 345 KLTVEIREITIELENTQI----IVQDLTKRNRQLENENAALQK-----RCDDLS------ 389
Query: 121 NTSNNSSIRMTRKRMRQEQDALDIEARCIPSENEGVDTQESDHQNWLVHA 170
+ N +R + + E L + + +N ++ + + QN L A
Sbjct: 390 --AENGQLRNEKANLEAECARLKVANAELAEKNANLERENAGLQNALREA 437
>SCP1_RAT (Q03410) Synaptonemal complex protein 1 (SCP-1 protein)
Length = 997
Score = 37.4 bits (85), Expect = 0.037
Identities = 30/134 (22%), Positives = 66/134 (48%), Gaps = 11/134 (8%)
Query: 19 KLSELEDV-----HKEQELKFLKFVSAAEDVIDHLRTENDKLLGQINDLGNELTSVRVAK 73
K SELE++ +KE EL+ LK + A + + + + +KL ++ ELT + +
Sbjct: 416 KSSELEEMTKFKNNKEVELEELKTILAEDQKLLDEKKQVEKLAEELQGKEQELTFLLQTR 475
Query: 74 DNELVEHKRLLLEEKKKNEALFEEVEKLQKLLKEGTSGDLSNRKVVNNTSNNSSIRMTRK 133
+ E+ + + + K E ++VE+++ L++ K + T+N+ + + K
Sbjct: 476 EKEIHDLEVQVTVTKTSEEHYLKQVEEMKTELEK------EKLKNIELTANSDMLLLENK 529
Query: 134 RMRQEQDALDIEAR 147
++ QE + +E +
Sbjct: 530 KLVQEASDMVLELK 543
Score = 33.5 bits (75), Expect = 0.53
Identities = 30/96 (31%), Positives = 46/96 (47%), Gaps = 3/96 (3%)
Query: 15 LKTNKLSELEDVHKEQELKFLKFVSAAEDVIDHLRTENDKLLGQINDLGNELTSVRVAKD 74
+K K +L HK E+ L + + D + E D LG + E +S +VA +
Sbjct: 715 VKLQKEIDLRCQHKIAEMVAL--MEKHKHQYDKIVEERDSELGLYKNREQEQSSAKVALE 772
Query: 75 NELVEHKRLLLEEKKKNEALFEEVEKLQKLLKEGTS 110
EL + L+ KK+ E EE EKL K+ +E T+
Sbjct: 773 TELSNIRNELVSLKKQLEVEKEEKEKL-KMEQENTA 807
Score = 29.6 bits (65), Expect = 7.7
Identities = 27/102 (26%), Positives = 48/102 (46%), Gaps = 12/102 (11%)
Query: 45 IDHLRTENDKLLGQINDLGNELTSVRV---AKDNELVEHKRLLLEEKKKNEALFEEVEKL 101
I HL E K ++N+ N+++ + + K+N++ + LL E + K L E+ +
Sbjct: 251 IQHLEEEYQK---EVNNKENQVSLLLIQSTEKENKMKDLTFLLEESRDKANQLEEKTKLQ 307
Query: 102 QKLLKEGTSGDLSNRKVVNNTSNNSSIRMTRKRMRQEQDALD 143
+ LKE N K + TS I+M+ +R Q L+
Sbjct: 308 DENLKE------LNEKKDHLTSELEDIKMSMQRSMSTQKTLE 343
>SMY1_YEAST (P32364) Kinesin-related protein SMY1 (Suppressor
protein SMY1)
Length = 656
Score = 37.0 bits (84), Expect = 0.048
Identities = 22/74 (29%), Positives = 41/74 (54%), Gaps = 2/74 (2%)
Query: 45 IDHLRTENDKLLGQINDLGNELTSVRVAKDNELVE--HKRLLLEEKKKNEALFEEVEKLQ 102
I ++ ++D + QIN L E+ S++ + L E K++L KK+N L +++ +
Sbjct: 385 IQDMKIKDDNYVAQINILKAEIDSLKSLHNKSLPEDDEKKMLENTKKENIKLKLQLDSIT 444
Query: 103 KLLKEGTSGDLSNR 116
+LL T+ D +NR
Sbjct: 445 QLLSSSTNEDPNNR 458
>PCP1_SCHPO (Q92351) Spindle pole body protein pcp1
Length = 1208
Score = 37.0 bits (84), Expect = 0.048
Identities = 34/153 (22%), Positives = 72/153 (46%), Gaps = 16/153 (10%)
Query: 2 EALYKKLYSKYTTL--KTNKLSELEDVHKEQELK-FLKFVSAAEDVIDHLRTENDKLLGQ 58
E+L +K K L K + LS++ DV + Q +K F + + E+ ++ ++ E D L
Sbjct: 212 ESLLQKSEDKNFKLEEKVDYLSKVNDVEQSQNVKVFTERIRFLENALEKVQREKDSLS-- 269
Query: 59 INDLGNELTSVRVAKDNELVEHKRLLLEEKKKNEALFEEVEKLQKLLKEGTSGDLSNRKV 118
T + K N+ V+++ + + + + + L EE++ Q LL E + ++
Sbjct: 270 --------TEMEEDKSNKEVDYEYEIRQLQNRLDELSEELDVAQDLLTEKEDEIATLKRQ 321
Query: 119 VNNTSNNSSIRMTRKR---MRQEQDALDIEARC 148
+ N+SS + + ++D ++A+C
Sbjct: 322 IEEKENSSSAFENEENSSYVHLQEDYAILQAKC 354
>MLP2_YEAST (P40457) MLP2 protein (Myosin-like protein 2)
Length = 1679
Score = 37.0 bits (84), Expect = 0.048
Identities = 37/164 (22%), Positives = 71/164 (42%), Gaps = 21/164 (12%)
Query: 19 KLSELEDVHKEQELKFLKFVSAAEDVIDHLRTENDKLLGQINDLGNELTSVRVAKDNEL- 77
+L E E H E ++ F + I L ++L + E+ S+R KD++L
Sbjct: 754 RLKESEISHNENKMDFSSKEGQYKAKIKELENNLERLRSDLQSKIQEIESIRSCKDSQLK 813
Query: 78 ----------VEHKRLLLEEKKKN---EALFEEVEKLQKLLKEGTSGDLSNRKVVNNTSN 124
++ K LL E K E L E+E L K L++ K ++ S+
Sbjct: 814 WAQNTIDDTEMKMKSLLTELSNKETTIEKLSSEIENLDKELRK----TKFQYKFLDQNSD 869
Query: 125 NSSIRMTRKRMRQEQDALDIEARCIPSENEGVDTQESDHQNWLV 168
S++ T +R+E + + ++ + S+ + + S ++N L+
Sbjct: 870 ASTLEPT---LRKELEQIQVQLKDANSQIQAYEEIISSNENALI 910
>DESP_HUMAN (P15924) Desmoplakin (DP) (250/210 kDa paraneoplastic
pemphigus antigen)
Length = 2871
Score = 37.0 bits (84), Expect = 0.048
Identities = 39/141 (27%), Positives = 63/141 (44%), Gaps = 18/141 (12%)
Query: 11 KYTTLKTNKLSELEDVHK----EQELKFLKFVSAAEDVIDHLRTENDKLLGQINDLGNEL 66
+Y K N S E ++K EQEL L+ + + RT D+ + + + EL
Sbjct: 1511 QYDLQKANS-SATETINKLKVQEQELTRLRI---DYERVSQERTVKDQDITRFQNSLKEL 1566
Query: 67 TSVRVAKDNELVEHKRLLLEEKKKNEALFEEVEKLQKLLKEGTSGDLSNRKVVNNTSNNS 126
+ + EL KR E+ K + L EE+E +++ LKE K+ N T
Sbjct: 1567 QLQKQKVEEELNRLKRTASEDSCKRKKLEEELEGMRRSLKEQAI------KITNLTQQLE 1620
Query: 127 SIRMTRKR----MRQEQDALD 143
+ +KR +RQ++D LD
Sbjct: 1621 QASIVKKRSEDDLRQQRDVLD 1641
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.315 0.131 0.364
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,461,800
Number of Sequences: 164201
Number of extensions: 1203068
Number of successful extensions: 4822
Number of sequences better than 10.0: 246
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 228
Number of HSP's that attempted gapping in prelim test: 4554
Number of HSP's gapped (non-prelim): 477
length of query: 261
length of database: 59,974,054
effective HSP length: 108
effective length of query: 153
effective length of database: 42,240,346
effective search space: 6462772938
effective search space used: 6462772938
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 65 (29.6 bits)
Medicago: description of AC130807.11