BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC130200.5 - phase: 0
(312 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
FTSY_AQUAE (O67066) Cell division protein ftsY homolog 42 0.002
KLC_DROME (P46824) Kinesin light chain (KLC) 34 0.41
ERB4_RAT (Q62956) Receptor tyrosine-protein kinase erbB-4 precur... 34 0.53
OGT1_RAT (P56558) UDP-N-acetylglucosamine--peptide N-acetylgluco... 33 0.70
OGT1_HUMAN (O15294) UDP-N-acetylglucosamine--peptide N-acetylglu... 33 0.70
ERB4_HUMAN (Q15303) Receptor tyrosine-protein kinase erbB-4 prec... 33 0.91
YE63_THETN (Q8R9W9) Hypothetical UPF0122 protein TTE1463 33 1.2
SR72_CAEEL (P91240) Signal recognition particle 72 kDa protein h... 33 1.2
SNE1_HUMAN (Q8NF91) Nesprin 1 (Nuclear envelope spectrin repeat ... 32 1.6
RPC2_PORPU (P51250) DNA-directed RNA polymerase beta'' chain (EC... 32 1.6
YG49_SCHPO (O60184) Protein C23E6.09 in chromosome II 32 2.0
IFA2_CAEEL (O02365) Intermediate filament protein ifa-2 (Interme... 32 2.0
RA50_PYRAB (Q9UZC8) DNA double-strand break repair rad50 ATPase 32 2.7
PRS6_YEAST (P33298) 26S protease regulatory subunit 6B homolog (... 32 2.7
YI97_HUMAN (Q96PZ0) Hypothetical pseudouridine synthase KIAA1897... 31 4.5
VGLH_EHV1B (Q6DLH1) Glycoprotein H precursor 31 4.5
VGLH_EHV1 (P68330) Glycoprotein H precursor 31 4.5
TTCJ_HUMAN (Q6DKK2) Tetratricopeptide repeat protein 19 (TPR rep... 31 4.5
PUMA_PARUN (O61308) 227 kDa spindle- and centromere-associated p... 31 4.5
NDL_DROME (P98159) Serine protease nudel precursor (EC 3.4.21.-) 30 5.9
>FTSY_AQUAE (O67066) Cell division protein ftsY homolog
Length = 461
Score = 42.4 bits (98), Expect = 0.002
Identities = 38/134 (28%), Positives = 68/134 (50%), Gaps = 13/134 (9%)
Query: 23 VLKKSSKGKKEDLYHVIHKVPYGDTPYVKA-----KHAQLVDKDPEVAIVY-----FWKA 72
+LKK + ++EDL ++ ++ + V+A K+ + K E A VY + KA
Sbjct: 37 ILKKYAS-QREDLAELLFELYVQEGKLVQAYPLLKKYGDKIGKAKERAKVYQAVGEYQKA 95
Query: 73 INAGDKVDS--ALKDMAVVMKQLDRAEEAIEAIKSFRGLCNKHSQESLDNVLLDLYKKCG 130
I KV +L ++A + QL++ ++A+E + L +E L+N + L K+ G
Sbjct: 96 IEEFLKVGDFESLYNVAKIYHQLEKPDKALEYAQRAEKLVPYEKKEELENFITQLKKELG 155
Query: 131 RVEEQIELLKRKLR 144
+EE+ E + KLR
Sbjct: 156 LIEEKKESILDKLR 169
Score = 30.8 bits (68), Expect = 4.5
Identities = 17/76 (22%), Positives = 39/76 (50%), Gaps = 5/76 (6%)
Query: 66 IVYFWKAINAGDKVDSALKDMAVVMKQLDRAEEAIEAIKSFRGLCNKHSQESLDNVLLDL 125
+V+FW+ + K + K+ + + + + E+A + +K + +E L +L +L
Sbjct: 1 MVFFWRKSDVEKKAEKGDKNAILELIKQGKKEKAEKILKKYAS-----QREDLAELLFEL 55
Query: 126 YKKCGRVEEQIELLKR 141
Y + G++ + LLK+
Sbjct: 56 YVQEGKLVQAYPLLKK 71
>KLC_DROME (P46824) Kinesin light chain (KLC)
Length = 508
Score = 34.3 bits (77), Expect = 0.41
Identities = 45/173 (26%), Positives = 71/173 (41%), Gaps = 33/173 (19%)
Query: 79 VDSALKDMAVVMKQLDRAEEAIEAIK---SFRGLC---NKHSQESLDNVLLDLYKKCGRV 132
V + L +A+V + ++ +EA + S RG N + + N L LY K G+
Sbjct: 227 VATMLNILALVYRDQNKYKEAANLLNDALSIRGKTLGENHPAVAATLNNLAVLYGKRGKY 286
Query: 133 EEQIELLKRKLRLIYQGEAFNGRTTKTARSHGKKFQVSIKQETARLLGNLGWAYMQKTNY 192
++ L KR L + R + H + A+ L NL + Y
Sbjct: 287 KDAEPLCKRALEI---------REKVLGKDH---------PDVAKQLNNLALLCQNQGKY 328
Query: 193 MMAEVVFKKAQMI------DADANKAL---NLALCLMRQSRYEEAYLILEQVL 236
E +++A I D N A NLA C ++Q RY EA ++ +QVL
Sbjct: 329 DEVEKYYQRALDIYESKLGPDDPNVAKTKNNLAGCYLKQGRYTEAEILYKQVL 381
>ERB4_RAT (Q62956) Receptor tyrosine-protein kinase erbB-4 precursor
(EC 2.7.1.112)
Length = 1308
Score = 33.9 bits (76), Expect = 0.53
Identities = 26/94 (27%), Positives = 43/94 (45%), Gaps = 13/94 (13%)
Query: 197 VVFKKAQMIDADAN-KALNLALCLMRQSRYEEAYLILEQVLQGKLPG------------S 243
+V K MIDAD+ K LA R +R + YL+++ + KLP
Sbjct: 951 IVMVKCWMIDADSRPKFKELAAEFSRMARDPQRYLVIQGDDRMKLPSPNDSKFFQNLLDE 1010
Query: 244 DEIKSRNRAEELLVELSANLPQPKFMDDLGLDDD 277
++++ AEE LV + N+P P + +D +
Sbjct: 1011 EDLEDMMDAEEYLVPQAFNIPPPIYTSRTRIDSN 1044
>OGT1_RAT (P56558) UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit (EC
2.4.1.-) (O-GlcNAc transferase p110 subunit)
Length = 1036
Score = 33.5 bits (75), Expect = 0.70
Identities = 24/103 (23%), Positives = 49/103 (47%), Gaps = 2/103 (1%)
Query: 63 EVAIVYFWKAINAGDKVDSALKDMAVVMKQLDRAEEAIEAIKSFRGLCNKHSQESLDNVL 122
++AI + +AI A ++A +K+ EA + + LC H+ +SL+N L
Sbjct: 266 DLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHA-DSLNN-L 323
Query: 123 LDLYKKCGRVEEQIELLKRKLRLIYQGEAFNGRTTKTARSHGK 165
++ ++ G +EE + L ++ L + + A + + GK
Sbjct: 324 ANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGK 366
>OGT1_HUMAN (O15294) UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit (EC
2.4.1.-) (O-GlcNAc transferase p110 subunit)
Length = 1036
Score = 33.5 bits (75), Expect = 0.70
Identities = 24/103 (23%), Positives = 49/103 (47%), Gaps = 2/103 (1%)
Query: 63 EVAIVYFWKAINAGDKVDSALKDMAVVMKQLDRAEEAIEAIKSFRGLCNKHSQESLDNVL 122
++AI + +AI A ++A +K+ EA + + LC H+ +SL+N L
Sbjct: 266 DLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHA-DSLNN-L 323
Query: 123 LDLYKKCGRVEEQIELLKRKLRLIYQGEAFNGRTTKTARSHGK 165
++ ++ G +EE + L ++ L + + A + + GK
Sbjct: 324 ANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGK 366
>ERB4_HUMAN (Q15303) Receptor tyrosine-protein kinase erbB-4 precursor
(EC 2.7.1.112) (p180erbB4) (Tyrosine kinase-type cell
surface receptor HER4)
Length = 1308
Score = 33.1 bits (74), Expect = 0.91
Identities = 26/94 (27%), Positives = 43/94 (45%), Gaps = 13/94 (13%)
Query: 197 VVFKKAQMIDADAN-KALNLALCLMRQSRYEEAYLILEQVLQGKLPG------------S 243
+V K MIDAD+ K LA R +R + YL+++ + KLP
Sbjct: 951 MVMVKCWMIDADSRPKFKELAAEFSRMARDPQRYLVIQGDDRMKLPSPNDSKFFQNLLDE 1010
Query: 244 DEIKSRNRAEELLVELSANLPQPKFMDDLGLDDD 277
++++ AEE LV + N+P P + +D +
Sbjct: 1011 EDLEDMMDAEEYLVPQAFNIPPPIYTSRARIDSN 1044
>YE63_THETN (Q8R9W9) Hypothetical UPF0122 protein TTE1463
Length = 117
Score = 32.7 bits (73), Expect = 1.2
Identities = 23/88 (26%), Positives = 41/88 (46%), Gaps = 9/88 (10%)
Query: 55 AQLVDKDPEVAIVYFWKAINAGDKVDSALKDMAVVMKQLDRAEEAIEAIKSFRGLCNKHS 114
A L DK E+ +Y+ + G+ + V L RAE+++E + GL KH
Sbjct: 17 ALLTDKQREIFEMYYLNDYSLGEISEILDISRQGVYDALKRAEDSLEFYEEKLGLVKKHQ 76
Query: 115 QESLDNVLLDLYKKCGRVEEQIELLKRK 142
++ KK +++E I+L+K +
Sbjct: 77 ---------EMMKKIEKIKECIKLIKER 95
>SR72_CAEEL (P91240) Signal recognition particle 72 kDa protein
homolog (SRP72)
Length = 694
Score = 32.7 bits (73), Expect = 1.2
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 4/83 (4%)
Query: 171 IKQETARLLGNLGW--AYMQKTNYMMAEVVFKKAQMIDADANKALNL-ALCLMRQSRYEE 227
I++ A +G++G+ AY+ + E + K+ D D KAL L A +Q Y++
Sbjct: 66 IRKTPAHQMGHVGFEKAYIHYRQDELDEAI-KELNTCDKDDVKALELKAQVFYKQENYQQ 124
Query: 228 AYLILEQVLQGKLPGSDEIKSRN 250
AY I +L+ SDE++ N
Sbjct: 125 AYDIYLYLLKNHSDDSDELRRAN 147
>SNE1_HUMAN (Q8NF91) Nesprin 1 (Nuclear envelope spectrin repeat
protein 1) (Synaptic nuclear envelope protein 1) (Syne-1)
(Myocyte nuclear envelope protein 1) (Myne-1) (Enaptin)
Length = 8797
Score = 32.3 bits (72), Expect = 1.6
Identities = 58/291 (19%), Positives = 117/291 (39%), Gaps = 61/291 (20%)
Query: 77 DKVDSALKDMAVVMKQLDRAEEAIEAIKSFRGL----CNKHSQESLDNVLLDLYKKCGR- 131
+ V + ++ + L++ E +++ S C+ E+L N L ++ +
Sbjct: 7164 EAVQVQVDNLQNLQDDLEKQERSLQKFGSITNQLLKECHPPVTETLTNTLKEVNMRWNNL 7223
Query: 132 ---VEEQIELLKRKLRLIYQGEAFNGRTTKTARSHGKKFQVSIKQETARLLGN------- 181
+ EQ++ K L+L + + ++ + T + + +K T + + +
Sbjct: 7224 LEEIAEQLQSSKALLQLWQRYKDYSKQCASTVQQQEDRTNELLKAATNKDIADDEVATWI 7283
Query: 182 -------LGWAYMQKTNYMMAEVVFKKAQMIDADANKA--------------LNLALCLM 220
G ++ + + + E+ + Q +DA A A L ALC
Sbjct: 7284 QDCNDLLKGLGTVKDSLFFLHELGEQLKQQVDASAASAIQSDQLSLSQHLCALEQALCKQ 7343
Query: 221 RQSR------YE---------EAYLI-LEQVLQGKLPG--SDEIKSRNRAEEL---LVEL 259
+ S YE EA+++ E++LQG+ P SD + R EEL +++
Sbjct: 7344 QTSLQAGVLDYETFAKSLEALEAWIVEAEEILQGQDPSHSSDLSTIQERMEELKGQMLKF 7403
Query: 260 SANLPQPKFMDDLG----LDDDLLKGIDGLLNVWSPTRSRRLPIFEEISSF 306
S+ P +++LG L+D +K + L WS S+ F ++ SF
Sbjct: 7404 SSMAPDLDRLNELGYRLPLNDKEIKRMQNLNRHWSLISSQTTERFSKLQSF 7454
>RPC2_PORPU (P51250) DNA-directed RNA polymerase beta'' chain (EC
2.7.7.6) (PEP) (Plastid-encoded RNA polymerase beta''
subunit) (RNA polymerase beta'' subunit)
Length = 1224
Score = 32.3 bits (72), Expect = 1.6
Identities = 37/151 (24%), Positives = 67/151 (43%), Gaps = 36/151 (23%)
Query: 57 LVDKDPEVAIVYFWKAINAGDKVDSALKDMAVVMKQLDRAEEAIEAIKSFRGLCNKHSQE 116
L+ K +A++ F +A GD +++ L R EE +EA K L N H
Sbjct: 966 LIRKGETLAVLVFDRA-KTGD-----------IIQGLPRIEEILEARKKTDVLLNPH--- 1010
Query: 117 SLDNVLLDLYKKCG---------RVEEQIELLKRKLRLIYQGEAFNGRTTKTARSHGKKF 167
+ + +LY +CG +E LL ++++L+YQ + N K
Sbjct: 1011 DILDASFNLYIECGLALYEAARLSFQEIQLLLVKEVQLVYQSQGVN--------ISDKHI 1062
Query: 168 QVSIKQETARLLGNLGWAYMQKTNYMMAEVV 198
+V ++Q T+++ G ++T Y+ E+V
Sbjct: 1063 EVIVRQMTSKVKIENG----EETGYLPGELV 1089
>YG49_SCHPO (O60184) Protein C23E6.09 in chromosome II
Length = 1102
Score = 32.0 bits (71), Expect = 2.0
Identities = 38/170 (22%), Positives = 70/170 (40%), Gaps = 40/170 (23%)
Query: 77 DKVDSALKDMAVVMKQLDRAEEAIEAIKSFRGLCNKHSQESLDN-----VLLDLYKKCGR 131
+KV+ + ++ KQ + +++E + LDN +LD+Y + G
Sbjct: 472 EKVNEIYFRLGIIYKQQHKFAQSLELFRHI-----------LDNPPKPLTVLDIYFQIGH 520
Query: 132 VEEQIELLKRKLRLIYQGEAFNGRTTKTARSHGKKFQVSIKQETARLLGNLGWAYMQK-- 189
V EQ +++ +L EA+ +T A++L LGW Q+
Sbjct: 521 VYEQ----RKEYKLAK--EAYERVLAETPNH-------------AKVLQQLGWLCHQQSS 561
Query: 190 --TNYMMA-EVVFKKAQMIDADANKALNLALCLMRQSRYEEAYLILEQVL 236
TN +A + + K + D DA + C + Q +Y +AY +Q +
Sbjct: 562 SFTNQDLAIQYLTKSLEADDTDAQSWYLIGRCYVAQQKYNKAYEAYQQAV 611
>IFA2_CAEEL (O02365) Intermediate filament protein ifa-2
(Intermediate filament protein A2) (IF-A2) (Cel IF A2)
Length = 581
Score = 32.0 bits (71), Expect = 2.0
Identities = 29/139 (20%), Positives = 61/139 (43%), Gaps = 8/139 (5%)
Query: 64 VAIVYFWKAINAGDKVDSALKDMAVVMKQLDRAEEAIEAI-KSFRGLCNKHSQESLDNVL 122
V ++Y + A + V KD K++ + ++ ++ + K F +++ L +
Sbjct: 117 VKVMYEMEITTATNVVKQTGKDHGETEKEIRKLQDQLDELRKKFEEAQRGRAEDRLK--I 174
Query: 123 LDLYKKCGRVEEQIELLKRKLRLIYQGEAFNGRTTKTARSHGKKFQVSIKQETARLLGNL 182
DL +E +I LLKR++ L+ + A + S ++ ++ + QET + N
Sbjct: 175 DDLLVTLSNLEAEINLLKRRIALLEEEVARLKKENFRLTSELQRVRIELDQETLLRIDN- 233
Query: 183 GWAYMQKTNYMMAEVVFKK 201
K ++ E+ F K
Sbjct: 234 ----QNKVKTILEEIDFMK 248
>RA50_PYRAB (Q9UZC8) DNA double-strand break repair rad50 ATPase
Length = 880
Score = 31.6 bits (70), Expect = 2.7
Identities = 43/199 (21%), Positives = 86/199 (42%), Gaps = 13/199 (6%)
Query: 7 EKQKGHLCVLEMEGISVLK--KSSKGKKEDLYHVIHKVPYGDTPYVKAKHAQLVDKDPEV 64
EK KG LE + + + + + K K +L ++ +P + + + + E
Sbjct: 252 EKLKGRKKGLEEKIVQIERSIEEKKAKISELEEIVKDIPKLQEKEKEYRKLKGFRDEYES 311
Query: 65 AIVYFWKAINAGDKVDSALKDMAVVMKQLDRAEEAIEAIKSFRGLCNKHSQESLDNVLLD 124
+ K ++ K +S LK + V+K+ ++ +E E I+ K +E V +
Sbjct: 312 KLRRLEKELS---KWESELKAIEEVIKEGEKKKERAEEIREKLSEIEKRLEELKPYV--E 366
Query: 125 LYKKCGRVEEQIELLKRKLRLIYQGEAFNGRTTKTARSHGKKFQVSIKQETARLLGNLGW 184
+ +V++QIE LK +L+ + GE ++ + + +IK+ T R +G
Sbjct: 367 ELEDAKQVQKQIERLKARLKGLSPGEVI--EKLESLEKERTEIEEAIKEITTR----IGQ 420
Query: 185 AYMQKTNYMMAEVVFKKAQ 203
+K M A +KA+
Sbjct: 421 MEQEKNERMKAIEELRKAK 439
>PRS6_YEAST (P33298) 26S protease regulatory subunit 6B homolog
(YNT1 protein) (TAT-binding homolog 2)
Length = 428
Score = 31.6 bits (70), Expect = 2.7
Identities = 22/85 (25%), Positives = 42/85 (48%), Gaps = 5/85 (5%)
Query: 89 VMKQLDRAEEAIEAIKSFRGLCNK-----HSQESLDNVLLDLYKKCGRVEEQIELLKRKL 143
++ +++A E A+KS+ L + ++ +L NV D+Y K ++E++ ELL +
Sbjct: 6 IVTPVEKAVEEKPAVKSYASLLAQLNGTVNNNSALSNVNSDIYFKLKKLEKEYELLTLQE 65
Query: 144 RLIYQGEAFNGRTTKTARSHGKKFQ 168
I + R K A+ K+ Q
Sbjct: 66 DYIKDEQRHLKRELKRAQEEVKRIQ 90
>YI97_HUMAN (Q96PZ0) Hypothetical pseudouridine synthase KIAA1897
(EC 4.2.1.70)
Length = 661
Score = 30.8 bits (68), Expect = 4.5
Identities = 26/103 (25%), Positives = 45/103 (43%), Gaps = 9/103 (8%)
Query: 81 SALKDMAVVMKQLDRAEEAIEAIKSFRGLCNKHSQESLDNVLLDLYKKCGRVEEQIELLK 140
S L D+++ + + D +E+ + + ++ L+ + L K+ E IE K
Sbjct: 149 SHLNDLSIPVDEEDPSEDIFTVLTA-------EEKQRLEELQLFKNKETSVAIEVIEDTK 201
Query: 141 RKLRLIYQG--EAFNGRTTKTARSHGKKFQVSIKQETARLLGN 181
K +I+Q F G TKT GKK+ V+ + L N
Sbjct: 202 EKRTIIHQAIKSLFPGLETKTEDREGKKYIVAYHAAGKKALAN 244
>VGLH_EHV1B (Q6DLH1) Glycoprotein H precursor
Length = 848
Score = 30.8 bits (68), Expect = 4.5
Identities = 27/116 (23%), Positives = 50/116 (42%), Gaps = 14/116 (12%)
Query: 3 PQKEEKQKGHLCVLEMEGISVLKKSSKGKKED----LYHVIHKVPYGD---------TPY 49
P++ + HL + ++ +++L + S GK D +Y ++ ++ + Y
Sbjct: 326 PEESLDYRYHLSLANLDTLAMLAELSSGKSTDVSYYMYRIVARLAVATFSLAEVIRLSDY 385
Query: 50 VKAKHAQLVDKDPEVAIVYFWKAINAGDKVDSALKDMAVVMKQLDRAEEAIEAIKS 105
+ + A VD + + + K AG DS+ V M Q D A+ IE I S
Sbjct: 386 MLLQEAIDVDMNLRLIVPLVMK-YAAGGAADSSYTSSDVAMDQFDVAQSQIEKIVS 440
>VGLH_EHV1 (P68330) Glycoprotein H precursor
Length = 848
Score = 30.8 bits (68), Expect = 4.5
Identities = 27/116 (23%), Positives = 50/116 (42%), Gaps = 14/116 (12%)
Query: 3 PQKEEKQKGHLCVLEMEGISVLKKSSKGKKED----LYHVIHKVPYGD---------TPY 49
P++ + HL + ++ +++L + S GK D +Y ++ ++ + Y
Sbjct: 326 PEESLDYRYHLSLANLDTLAMLAELSSGKSTDVSYYMYRIVARLAVATFSLAEVIRLSDY 385
Query: 50 VKAKHAQLVDKDPEVAIVYFWKAINAGDKVDSALKDMAVVMKQLDRAEEAIEAIKS 105
+ + A VD + + + K AG DS+ V M Q D A+ IE I S
Sbjct: 386 MLLQEAIDVDMNLRLIVPLVMK-YAAGGAADSSYTSSDVAMDQFDVAQSQIEKIVS 440
>TTCJ_HUMAN (Q6DKK2) Tetratricopeptide repeat protein 19 (TPR repeat
protein 19)
Length = 380
Score = 30.8 bits (68), Expect = 4.5
Identities = 23/77 (29%), Positives = 39/77 (49%), Gaps = 7/77 (9%)
Query: 184 WAYMQKTNYMMAEVVFKKAQMIDADANKALNLALCLMRQSRYEEAYLILEQVLQGKLPGS 243
+ YMQ+ + + ++ + M+ + NLA LM + RY +A I ++ L+
Sbjct: 299 YIYMQRASDLARQINHPELHMVLS------NLAAVLMHRERYTQAKEIYQEALKQAKLKK 352
Query: 244 DEIKSRNRAEELLVELS 260
DEI ++ EE L ELS
Sbjct: 353 DEISVQHIREE-LAELS 368
>PUMA_PARUN (O61308) 227 kDa spindle- and centromere-associated
protein (PUMA1)
Length = 1955
Score = 30.8 bits (68), Expect = 4.5
Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 7/95 (7%)
Query: 84 KDMAVVMKQLDRAEEAIEAIKSFRGLCNKHSQESLDNVLLDLYKKCGRVEEQIELLKRKL 143
K + ++ + AE I S R + S +L+ +LYK C ++++QI L+
Sbjct: 1682 KKIEILETEKHSAELVISETASQREAIER-SLNALERENKELYKNCAQLQQQIAQLE--- 1737
Query: 144 RLIYQGEAFNGRTTKTARSHGKKFQVSIKQETARL 178
+ GE TTK H +KF ++K E ++
Sbjct: 1738 --MDNGERLIALTTKQKEDH-EKFVAAVKAEKVQV 1769
>NDL_DROME (P98159) Serine protease nudel precursor (EC 3.4.21.-)
Length = 2616
Score = 30.4 bits (67), Expect = 5.9
Identities = 15/50 (30%), Positives = 26/50 (52%)
Query: 95 RAEEAIEAIKSFRGLCNKHSQESLDNVLLDLYKKCGRVEEQIELLKRKLR 144
RA EA+ ++ C KH+ + + L +YK V E++E +K +R
Sbjct: 158 RAREALSQLEHEFVRCKKHTPQDCMSAFLRMYKMAKEVTEKMEKMKAIMR 207
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.318 0.135 0.383
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 34,616,664
Number of Sequences: 164201
Number of extensions: 1408244
Number of successful extensions: 4084
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 25
Number of HSP's that attempted gapping in prelim test: 4074
Number of HSP's gapped (non-prelim): 36
length of query: 312
length of database: 59,974,054
effective HSP length: 110
effective length of query: 202
effective length of database: 41,911,944
effective search space: 8466212688
effective search space used: 8466212688
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 66 (30.0 bits)
Medicago: description of AC130200.5