BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC129091.6 - phase: 0 /pseudo
         (1077 letters)

Database: sprot 
           164,201 sequences; 59,974,054 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

LIE2_STREX (P83913) Leupeptin-inactivating enzyme 2 precursor (E...    35  1.4
SPCO_HUMAN (Q01082) Spectrin beta chain, brain 1 (Spectrin, non-...    34  1.9
SPCO_MOUSE (Q62261) Spectrin beta chain, brain 1 (Spectrin, non-...    33  4.1
SYE1_RHILO (Q98MD0) Glutamyl-tRNA synthetase 1 (EC 6.1.1.17) (Gl...    32  9.2

>LIE2_STREX (P83913) Leupeptin-inactivating enzyme 2 precursor (EC
           3.4.24.-) (LIE2)
          Length = 1090

 Score = 34.7 bits (78), Expect = 1.4
 Identities = 20/70 (28%), Positives = 33/70 (46%), Gaps = 3/70 (4%)

Query: 732 PGGENGTTISGGSTQMNAWVQEAIAKISSTSDGVS-NLTPTSPIGGPSSLMPISINTETF 790
           PGG    T++  +  ++   Q     +S    GV+  L+PTS   G SS + + +   T 
Sbjct: 924 PGGSTSATVN--TATVSGAAQTVALSVSGAPAGVTATLSPTSVQSGSSSALSVQVGASTA 981

Query: 791 PGTPAVRLIG 800
           PGT  + + G
Sbjct: 982 PGTYTLTVTG 991


>SPCO_HUMAN (Q01082) Spectrin beta chain, brain 1 (Spectrin,
            non-erythroid beta chain 1) (Beta-II spectrin) (Fodrin
            beta chain)
          Length = 2364

 Score = 34.3 bits (77), Expect = 1.9
 Identities = 17/52 (32%), Positives = 26/52 (49%)

Query: 746  QMNAWVQEAIAKISSTSDGVSNLTPTSPIGGPSSLMPISINTETFPGTPAVR 797
            +MN W+Q   + ISS    VS  T ++P    +  +P S+ T T   +P  R
Sbjct: 2294 EMNTWIQAISSAISSDKHEVSASTQSTPASSRAQTLPTSVVTITSESSPGKR 2345


>SPCO_MOUSE (Q62261) Spectrin beta chain, brain 1 (Spectrin,
            non-erythroid beta chain 1) (Beta-II spectrin) (Fodrin
            beta chain)
          Length = 2363

 Score = 33.1 bits (74), Expect = 4.1
 Identities = 16/52 (30%), Positives = 25/52 (47%)

Query: 746  QMNAWVQEAIAKISSTSDGVSNLTPTSPIGGPSSLMPISINTETFPGTPAVR 797
            +MN W+Q   + ISS     S  T ++P    +  +P S+ T T   +P  R
Sbjct: 2293 EMNTWIQAISSAISSDKHDTSASTQSTPASSRAQTLPTSVVTITSESSPGKR 2344


>SYE1_RHILO (Q98MD0) Glutamyl-tRNA synthetase 1 (EC 6.1.1.17)
           (Glutamate--tRNA ligase 1) (GluRS 1)
          Length = 474

 Score = 32.0 bits (71), Expect = 9.2
 Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 1/51 (1%)

Query: 836 TSLVRSDDGQTGRAGQ-IVHGSKGGEEPSLGHIRLGTGNSGQGYSFKEAAL 885
           T ++R DD  T  A Q +++ + G + PS+ HI L  G  G   S +  AL
Sbjct: 198 THIIRGDDHLTNAARQTVIYNAMGWDVPSMSHIPLIHGADGAKLSKRHGAL 248


  Database: sprot
    Posted date:  Nov 25, 2004 10:54 AM
  Number of letters in database: 59,974,054
  Number of sequences in database:  164,201
  
Lambda     K      H
   0.340    0.148    0.510 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 121,541,801
Number of Sequences: 164201
Number of extensions: 5038333
Number of successful extensions: 15186
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 15181
Number of HSP's gapped (non-prelim): 7
length of query: 1077
length of database: 59,974,054
effective HSP length: 121
effective length of query: 956
effective length of database: 40,105,733
effective search space: 38341080748
effective search space used: 38341080748
T: 11
A: 40
X1: 15 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (21.9 bits)
S2: 71 (32.0 bits)