BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC129091.5 - phase: 0 /pseudo
         (980 letters)

Database: sprot 
           164,201 sequences; 59,974,054 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

PSAA_PROMA (Q9L4N4) Photosystem I P700 chlorophyll A apoprotein ...    33  3.7
ERB3_HUMAN (P21860) Receptor tyrosine-protein kinase erbB-3 prec...    33  3.7
YE57_SCHPO (O14173) Hypothetical protein C4D7.07c in chromosome I      33  4.9

>PSAA_PROMA (Q9L4N4) Photosystem I P700 chlorophyll A apoprotein A1
           (PsaA)
          Length = 773

 Score = 33.1 bits (74), Expect = 3.7
 Identities = 22/71 (30%), Positives = 31/71 (42%), Gaps = 4/71 (5%)

Query: 379 WESKVDISIPATDDKSKGIHFNPFDLPKYLGTL---ARVVFSAQGGEIAVAFFQGRVRIF 435
           W SK+    P T      +H +  D   +LG L   +R +FSA  G +AV F       F
Sbjct: 42  WSSKLSKG-PKTTTWIWNLHADAHDFDTHLGDLEETSRKIFSAHFGHLAVVFIWMSAAFF 100

Query: 436 SGSNFEPVTNY 446
            G+ F   T +
Sbjct: 101 HGARFSNYTGW 111


>ERB3_HUMAN (P21860) Receptor tyrosine-protein kinase erbB-3 precursor
            (EC 2.7.1.112) (c-erbB3) (Tyrosine kinase-type cell
            surface receptor HER3)
          Length = 1342

 Score = 33.1 bits (74), Expect = 3.7
 Identities = 44/151 (29%), Positives = 59/151 (38%), Gaps = 14/151 (9%)

Query: 775  GSKGGEEPSPGPVRLGNGNAGQGYSVEEVKVIFQVLLDLCRRTSGLQHPLPVSQVGSSNI 834
            GS+    PS G + +  GN G+  S +E  V      + C R   L HP+P   + S + 
Sbjct: 1043 GSQSLLSPSSGYMPMNQGNLGE--SCQESAVSGSS--ERCPRPVSL-HPMPRGCLASESS 1097

Query: 835  QVQLHYIEGSYTVLPEVVEASLGPYMQNMPR-LGDA----DDTGLLLRELQLHPPAEEWH 889
            +    ++ GS   L E V           PR  GD+        LL     L PP  E  
Sbjct: 1098 E---GHVTGSEAELQEKVSMCRSRSRSRSPRPRGDSAYHSQRHSLLTPVTPLSPPGLEEE 1154

Query: 890  QLNMFVRPCTDSNDTPKPFRSNPLDSRSLES 920
             +N +V P T    TP   R   L S  L S
Sbjct: 1155 DVNGYVMPDTHLKGTPSS-REGTLSSVGLSS 1184


>YE57_SCHPO (O14173) Hypothetical protein C4D7.07c in chromosome I
          Length = 600

 Score = 32.7 bits (73), Expect = 4.9
 Identities = 28/106 (26%), Positives = 46/106 (42%), Gaps = 12/106 (11%)

Query: 606 INPSALLPDPWQASEEILSNFDMEEMAVEPELTPCIQAYVDSV---IDLASHLITRLRHY 662
           I+P  +L   W  +  ++S +D++   +   + P +  Y+D +   I L SHL    +H 
Sbjct: 201 ISPEDVLLHFWDRN--LMSTYDLKIQDINDSVNPLLNTYLDFIEKDIYLVSHLPVSEKHP 258

Query: 663 AKIFRTLANQAVTVASGSTSGGVPNLTLNPSISGPSSLMLISINTG 708
             I  +L N++V            NL  NPS  G      + IN G
Sbjct: 259 GNIPISLVNKSVQAICSFAEH--YNLLRNPSYRG-----FLRINNG 297


  Database: sprot
    Posted date:  Nov 25, 2004 10:54 AM
  Number of letters in database: 59,974,054
  Number of sequences in database:  164,201
  
Lambda     K      H
   0.327    0.141    0.447 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 115,740,043
Number of Sequences: 164201
Number of extensions: 4998359
Number of successful extensions: 13451
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 13447
Number of HSP's gapped (non-prelim): 7
length of query: 980
length of database: 59,974,054
effective HSP length: 120
effective length of query: 860
effective length of database: 40,269,934
effective search space: 34632143240
effective search space used: 34632143240
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 71 (32.0 bits)