BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC128660.9 + phase: 0 /pseudo
         (58 letters)

Database: sprot 
           164,201 sequences; 59,974,054 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

CHMU_ARATH (P42738) Chorismate mutase, chloroplast precursor (EC...    40  0.002
RECA_STAEP (Q8CPF4) RecA protein (Recombinase A)                       28  4.5
CARP_RHIPU (P09177) Mucorpepsin precursor (EC 3.4.23.23) (Mucor ...    27  7.7

>CHMU_ARATH (P42738) Chorismate mutase, chloroplast precursor (EC
           5.4.99.5) (CM-1)
          Length = 334

 Score = 39.7 bits (91), Expect = 0.002
 Identities = 19/66 (28%), Positives = 35/66 (52%), Gaps = 8/66 (12%)

Query: 1   MKLLTFKSVEEMVKKRLKKKTTLFRQDINF----DNNDDNKGKQ----KFDPSMASTFYE 52
           M +LTF +VE+ +KKR++ KT  + Q++         ++ +G +    K  P +    Y 
Sbjct: 255 MDMLTFPTVEDAIKKRVEMKTRTYGQEVKVGMEEKEEEEEEGNESHVYKISPILVGDLYG 314

Query: 53  KWVIPL 58
            W++PL
Sbjct: 315 DWIMPL 320


>RECA_STAEP (Q8CPF4) RecA protein (Recombinase A)
          Length = 349

 Score = 28.1 bits (61), Expect = 4.5
 Identities = 10/35 (28%), Positives = 23/35 (65%)

Query: 9   VEEMVKKRLKKKTTLFRQDINFDNNDDNKGKQKFD 43
           ++E + ++L++K  +F  D++ + N+D+  K  FD
Sbjct: 314 IKEEIDRKLREKLGIFDGDVDENENEDDSPKTLFD 348


>CARP_RHIPU (P09177) Mucorpepsin precursor (EC 3.4.23.23) (Mucor
           rennin)
          Length = 427

 Score = 27.3 bits (59), Expect = 7.7
 Identities = 12/22 (54%), Positives = 16/22 (72%)

Query: 31  DNNDDNKGKQKFDPSMASTFYE 52
           DN++   GK+ FDPS +STF E
Sbjct: 118 DNSEGCVGKRFFDPSSSSTFKE 139


  Database: sprot
    Posted date:  Nov 25, 2004 10:54 AM
  Number of letters in database: 59,974,054
  Number of sequences in database:  164,201
  
Lambda     K      H
   0.318    0.133    0.381 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,703,787
Number of Sequences: 164201
Number of extensions: 198268
Number of successful extensions: 659
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 655
Number of HSP's gapped (non-prelim): 3
length of query: 58
length of database: 59,974,054
effective HSP length: 34
effective length of query: 24
effective length of database: 54,391,220
effective search space: 1305389280
effective search space used: 1305389280
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)