Medicago
BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC127169.10 + phase: 1 /pseudo/partial
         (367 letters)

Database: sprot 
           164,201 sequences; 59,974,054 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

GUN1_PERAE (P05522) Endoglucanase 1 precursor (EC 3.2.1.4) (Endo...    37  0.061
GUN_PHAVU (P22503) Endoglucanase precursor (EC 3.2.1.4) (Endo-1,...    33  0.87

>GUN1_PERAE (P05522) Endoglucanase 1 precursor (EC 3.2.1.4)
           (Endo-1,4-beta-glucanase) (Abscission cellulase 1)
          Length = 494

 Score = 37.4 bits (85), Expect = 0.061
 Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 6/62 (9%)

Query: 52  DHARELIKWGTDYLLLTFDSSASEINQIHAKVG---GSLKGSEKPEDMEYPRPTTTI*SE 108
           ++AR  ++W TDYLL    +S +  N ++ +VG      +  E+PEDM+ PR    + ++
Sbjct: 113 ENARAALRWSTDYLL---KASTATSNSLYVQVGEPNADHRCWERPEDMDTPRNVYKVSTQ 169

Query: 109 GP 110
            P
Sbjct: 170 NP 171


>GUN_PHAVU (P22503) Endoglucanase precursor (EC 3.2.1.4)
           (Endo-1,4-beta-glucanase) (Abscission cellulase)
          Length = 496

 Score = 33.5 bits (75), Expect = 0.87
 Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 1/65 (1%)

Query: 46  NTVNRYDHARELIKWGTDYLLLTFDSSASEINQIHAKVGGSLKGSEKPEDMEYPRPTTTI 105
           ++VN+  + +  I+WG D++L    S  +   Q+           E+PEDM+ PR    I
Sbjct: 120 SSVNQLGYLQSAIRWGADFMLRAHTSPTTLYTQV-GDGNADHNCWERPEDMDTPRTVYKI 178

Query: 106 *SEGP 110
            +  P
Sbjct: 179 DANSP 183


  Database: sprot
    Posted date:  Nov 25, 2004 10:54 AM
  Number of letters in database: 59,974,054
  Number of sequences in database:  164,201
  
Lambda     K      H
   0.343    0.153    0.541 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 41,466,658
Number of Sequences: 164201
Number of extensions: 1689284
Number of successful extensions: 5938
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 5935
Number of HSP's gapped (non-prelim): 3
length of query: 367
length of database: 59,974,054
effective HSP length: 112
effective length of query: 255
effective length of database: 41,583,542
effective search space: 10603803210
effective search space used: 10603803210
T: 11
A: 40
X1: 15 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 38 (21.5 bits)
S2: 66 (30.0 bits)


Medicago: description of AC127169.10