
BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC127169.10 + phase: 1 /pseudo/partial
(367 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
GUN1_PERAE (P05522) Endoglucanase 1 precursor (EC 3.2.1.4) (Endo... 37 0.061
GUN_PHAVU (P22503) Endoglucanase precursor (EC 3.2.1.4) (Endo-1,... 33 0.87
>GUN1_PERAE (P05522) Endoglucanase 1 precursor (EC 3.2.1.4)
(Endo-1,4-beta-glucanase) (Abscission cellulase 1)
Length = 494
Score = 37.4 bits (85), Expect = 0.061
Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 6/62 (9%)
Query: 52 DHARELIKWGTDYLLLTFDSSASEINQIHAKVG---GSLKGSEKPEDMEYPRPTTTI*SE 108
++AR ++W TDYLL +S + N ++ +VG + E+PEDM+ PR + ++
Sbjct: 113 ENARAALRWSTDYLL---KASTATSNSLYVQVGEPNADHRCWERPEDMDTPRNVYKVSTQ 169
Query: 109 GP 110
P
Sbjct: 170 NP 171
>GUN_PHAVU (P22503) Endoglucanase precursor (EC 3.2.1.4)
(Endo-1,4-beta-glucanase) (Abscission cellulase)
Length = 496
Score = 33.5 bits (75), Expect = 0.87
Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Query: 46 NTVNRYDHARELIKWGTDYLLLTFDSSASEINQIHAKVGGSLKGSEKPEDMEYPRPTTTI 105
++VN+ + + I+WG D++L S + Q+ E+PEDM+ PR I
Sbjct: 120 SSVNQLGYLQSAIRWGADFMLRAHTSPTTLYTQV-GDGNADHNCWERPEDMDTPRTVYKI 178
Query: 106 *SEGP 110
+ P
Sbjct: 179 DANSP 183
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.343 0.153 0.541
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 41,466,658
Number of Sequences: 164201
Number of extensions: 1689284
Number of successful extensions: 5938
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 5935
Number of HSP's gapped (non-prelim): 3
length of query: 367
length of database: 59,974,054
effective HSP length: 112
effective length of query: 255
effective length of database: 41,583,542
effective search space: 10603803210
effective search space used: 10603803210
T: 11
A: 40
X1: 15 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 38 (21.5 bits)
S2: 66 (30.0 bits)
Medicago: description of AC127169.10