BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC127019.10 + phase: 0
(113 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
H3_WHEAT (P68428) Histone H3 134 4e-32
H3_PEA (P68427) Histone H3 134 4e-32
H3_ONOVI (P68430) Histone H3 134 4e-32
H3_MEDSA (P68429) Histone H3 134 4e-32
H3_MAIZE (P05203) Histone H3 133 8e-32
H3_ENCAL (P08903) Histone H3 133 8e-32
H3_ARATH (P59226) Histone H3 133 8e-32
H3_CAEEL (P08898) Histone H3 132 1e-31
H3B_HUMAN (Q93081) Histone H3/b 131 3e-31
H31_MOUSE (P68433) Histone H3.1 130 4e-31
H31_HUMAN (P68431) Histone H3.1 (H3/a) (H3/c) (H3/d) (H3/f) (H3/... 130 4e-31
H31_BOVIN (P68432) Histone H3.1 130 4e-31
H3_URECA (P84239) Histone H3 130 5e-31
H3_TIGCA (P84237) Histone H3 130 5e-31
H3_PORAF (P84232) Histone H3 130 5e-31
H3_PLADU (P84235) Histone H3 130 5e-31
H3_ONCMY (P84234) Histone H3 130 5e-31
H3_ICTBU (P84231) Histone H3 130 5e-31
H3_DROME (P02299) Histone H3 130 5e-31
H3_DROHY (P84236) Histone H3 130 5e-31
>H3_WHEAT (P68428) Histone H3
Length = 135
Score = 134 bits (337), Expect = 4e-32
Identities = 77/115 (66%), Positives = 83/115 (71%), Gaps = 3/115 (2%)
Query: 2 AGTKQTAR-NTGGKAPRKQLATKAARKSALAAGTVKKPHHFCHGTVALREIRNYQRSTS- 59
A TKQTAR +TGGKAPRKQLATKAARKSA A G VKKPH F GTVALREIR YQ+ST
Sbjct: 1 ARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTEL 60
Query: 60 -NKEASVSETCEGNCSGFKTGLRFQSSAVSAVQEVVEACFVSLFEDTNICAIHAK 113
++ FKT LRFQSSAVSA+QE EA V LFEDTN+CAIHAK
Sbjct: 61 LIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIHAK 115
>H3_PEA (P68427) Histone H3
Length = 135
Score = 134 bits (337), Expect = 4e-32
Identities = 77/115 (66%), Positives = 83/115 (71%), Gaps = 3/115 (2%)
Query: 2 AGTKQTAR-NTGGKAPRKQLATKAARKSALAAGTVKKPHHFCHGTVALREIRNYQRSTS- 59
A TKQTAR +TGGKAPRKQLATKAARKSA A G VKKPH F GTVALREIR YQ+ST
Sbjct: 1 ARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTEL 60
Query: 60 -NKEASVSETCEGNCSGFKTGLRFQSSAVSAVQEVVEACFVSLFEDTNICAIHAK 113
++ FKT LRFQSSAVSA+QE EA V LFEDTN+CAIHAK
Sbjct: 61 LIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIHAK 115
>H3_ONOVI (P68430) Histone H3
Length = 135
Score = 134 bits (337), Expect = 4e-32
Identities = 77/115 (66%), Positives = 83/115 (71%), Gaps = 3/115 (2%)
Query: 2 AGTKQTAR-NTGGKAPRKQLATKAARKSALAAGTVKKPHHFCHGTVALREIRNYQRSTS- 59
A TKQTAR +TGGKAPRKQLATKAARKSA A G VKKPH F GTVALREIR YQ+ST
Sbjct: 1 ARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTEL 60
Query: 60 -NKEASVSETCEGNCSGFKTGLRFQSSAVSAVQEVVEACFVSLFEDTNICAIHAK 113
++ FKT LRFQSSAVSA+QE EA V LFEDTN+CAIHAK
Sbjct: 61 LIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIHAK 115
>H3_MEDSA (P68429) Histone H3
Length = 135
Score = 134 bits (337), Expect = 4e-32
Identities = 77/115 (66%), Positives = 83/115 (71%), Gaps = 3/115 (2%)
Query: 2 AGTKQTAR-NTGGKAPRKQLATKAARKSALAAGTVKKPHHFCHGTVALREIRNYQRSTS- 59
A TKQTAR +TGGKAPRKQLATKAARKSA A G VKKPH F GTVALREIR YQ+ST
Sbjct: 1 ARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTEL 60
Query: 60 -NKEASVSETCEGNCSGFKTGLRFQSSAVSAVQEVVEACFVSLFEDTNICAIHAK 113
++ FKT LRFQSSAVSA+QE EA V LFEDTN+CAIHAK
Sbjct: 61 LIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIHAK 115
>H3_MAIZE (P05203) Histone H3
Length = 135
Score = 133 bits (334), Expect = 8e-32
Identities = 76/115 (66%), Positives = 83/115 (72%), Gaps = 3/115 (2%)
Query: 2 AGTKQTAR-NTGGKAPRKQLATKAARKSALAAGTVKKPHHFCHGTVALREIRNYQRSTS- 59
A TKQTAR +TGGKAPRKQLATKAARKSA A G VKKPH F GTVALREIR YQ+ST
Sbjct: 1 ARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTEL 60
Query: 60 -NKEASVSETCEGNCSGFKTGLRFQSSAVSAVQEVVEACFVSLFEDTNICAIHAK 113
++ FKT LRFQSSAV+A+QE EA V LFEDTN+CAIHAK
Sbjct: 61 LIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAK 115
>H3_ENCAL (P08903) Histone H3
Length = 135
Score = 133 bits (334), Expect = 8e-32
Identities = 76/115 (66%), Positives = 83/115 (72%), Gaps = 3/115 (2%)
Query: 2 AGTKQTAR-NTGGKAPRKQLATKAARKSALAAGTVKKPHHFCHGTVALREIRNYQRSTS- 59
A TKQTAR +TGGKAPRKQLATKAARKSA A G VKKPH F GTVALREIR YQ+ST
Sbjct: 1 ARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRRYQKSTEL 60
Query: 60 -NKEASVSETCEGNCSGFKTGLRFQSSAVSAVQEVVEACFVSLFEDTNICAIHAK 113
++ FKT LRFQSSAV+A+QE EA V LFEDTN+CAIHAK
Sbjct: 61 LIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAK 115
>H3_ARATH (P59226) Histone H3
Length = 135
Score = 133 bits (334), Expect = 8e-32
Identities = 76/115 (66%), Positives = 83/115 (72%), Gaps = 3/115 (2%)
Query: 2 AGTKQTAR-NTGGKAPRKQLATKAARKSALAAGTVKKPHHFCHGTVALREIRNYQRSTS- 59
A TKQTAR +TGGKAPRKQLATKAARKSA A G VKKPH F GTVALREIR YQ+ST
Sbjct: 1 ARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTEL 60
Query: 60 -NKEASVSETCEGNCSGFKTGLRFQSSAVSAVQEVVEACFVSLFEDTNICAIHAK 113
++ FKT LRFQSSAV+A+QE EA V LFEDTN+CAIHAK
Sbjct: 61 LIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAK 115
>H3_CAEEL (P08898) Histone H3
Length = 135
Score = 132 bits (333), Expect = 1e-31
Identities = 76/115 (66%), Positives = 83/115 (72%), Gaps = 3/115 (2%)
Query: 2 AGTKQTAR-NTGGKAPRKQLATKAARKSALAAGTVKKPHHFCHGTVALREIRNYQRSTS- 59
A TKQTAR +TGGKAPRKQLATKAARKSA A+G VKKPH + GTVALREIR YQ+ST
Sbjct: 1 ARTKQTARKSTGGKAPRKQLATKAARKSAPASGGVKKPHRYRPGTVALREIRRYQKSTEL 60
Query: 60 -NKEASVSETCEGNCSGFKTGLRFQSSAVSAVQEVVEACFVSLFEDTNICAIHAK 113
+ A FKT LRFQSSAV A+QE EA V LFEDTN+CAIHAK
Sbjct: 61 LIRRAPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAK 115
>H3B_HUMAN (Q93081) Histone H3/b
Length = 135
Score = 131 bits (329), Expect = 3e-31
Identities = 75/115 (65%), Positives = 82/115 (71%), Gaps = 3/115 (2%)
Query: 2 AGTKQTAR-NTGGKAPRKQLATKAARKSALAAGTVKKPHHFCHGTVALREIRNYQRSTS- 59
A TKQTAR +TGGKAPRKQLATKAARKSA A G VKKPH + GTVALREIR YQ+ST
Sbjct: 1 ARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTEL 60
Query: 60 -NKEASVSETCEGNCSGFKTGLRFQSSAVSAVQEVVEACFVSLFEDTNICAIHAK 113
++ FKT LRFQSSAV A+QE EA V LFEDTN+CAIHAK
Sbjct: 61 LIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEATLVGLFEDTNLCAIHAK 115
>H31_MOUSE (P68433) Histone H3.1
Length = 135
Score = 130 bits (328), Expect = 4e-31
Identities = 75/115 (65%), Positives = 82/115 (71%), Gaps = 3/115 (2%)
Query: 2 AGTKQTAR-NTGGKAPRKQLATKAARKSALAAGTVKKPHHFCHGTVALREIRNYQRSTS- 59
A TKQTAR +TGGKAPRKQLATKAARKSA A G VKKPH + GTVALREIR YQ+ST
Sbjct: 1 ARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTEL 60
Query: 60 -NKEASVSETCEGNCSGFKTGLRFQSSAVSAVQEVVEACFVSLFEDTNICAIHAK 113
++ FKT LRFQSSAV A+QE EA V LFEDTN+CAIHAK
Sbjct: 61 LIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAK 115
>H31_HUMAN (P68431) Histone H3.1 (H3/a) (H3/c) (H3/d) (H3/f) (H3/h)
(H3/i) (H3/j) (H3/k) (H3/l)
Length = 135
Score = 130 bits (328), Expect = 4e-31
Identities = 75/115 (65%), Positives = 82/115 (71%), Gaps = 3/115 (2%)
Query: 2 AGTKQTAR-NTGGKAPRKQLATKAARKSALAAGTVKKPHHFCHGTVALREIRNYQRSTS- 59
A TKQTAR +TGGKAPRKQLATKAARKSA A G VKKPH + GTVALREIR YQ+ST
Sbjct: 1 ARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTEL 60
Query: 60 -NKEASVSETCEGNCSGFKTGLRFQSSAVSAVQEVVEACFVSLFEDTNICAIHAK 113
++ FKT LRFQSSAV A+QE EA V LFEDTN+CAIHAK
Sbjct: 61 LIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAK 115
>H31_BOVIN (P68432) Histone H3.1
Length = 135
Score = 130 bits (328), Expect = 4e-31
Identities = 75/115 (65%), Positives = 82/115 (71%), Gaps = 3/115 (2%)
Query: 2 AGTKQTAR-NTGGKAPRKQLATKAARKSALAAGTVKKPHHFCHGTVALREIRNYQRSTS- 59
A TKQTAR +TGGKAPRKQLATKAARKSA A G VKKPH + GTVALREIR YQ+ST
Sbjct: 1 ARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTEL 60
Query: 60 -NKEASVSETCEGNCSGFKTGLRFQSSAVSAVQEVVEACFVSLFEDTNICAIHAK 113
++ FKT LRFQSSAV A+QE EA V LFEDTN+CAIHAK
Sbjct: 61 LIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAK 115
>H3_URECA (P84239) Histone H3
Length = 135
Score = 130 bits (327), Expect = 5e-31
Identities = 75/115 (65%), Positives = 82/115 (71%), Gaps = 3/115 (2%)
Query: 2 AGTKQTAR-NTGGKAPRKQLATKAARKSALAAGTVKKPHHFCHGTVALREIRNYQRSTS- 59
A TKQTAR +TGGKAPRKQLATKAARKSA A G VKKPH + GTVALREIR YQ+ST
Sbjct: 1 ARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTEL 60
Query: 60 -NKEASVSETCEGNCSGFKTGLRFQSSAVSAVQEVVEACFVSLFEDTNICAIHAK 113
++ FKT LRFQSSAV A+QE EA V LFEDTN+CAIHAK
Sbjct: 61 LIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAK 115
>H3_TIGCA (P84237) Histone H3
Length = 135
Score = 130 bits (327), Expect = 5e-31
Identities = 75/115 (65%), Positives = 82/115 (71%), Gaps = 3/115 (2%)
Query: 2 AGTKQTAR-NTGGKAPRKQLATKAARKSALAAGTVKKPHHFCHGTVALREIRNYQRSTS- 59
A TKQTAR +TGGKAPRKQLATKAARKSA A G VKKPH + GTVALREIR YQ+ST
Sbjct: 1 ARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTEL 60
Query: 60 -NKEASVSETCEGNCSGFKTGLRFQSSAVSAVQEVVEACFVSLFEDTNICAIHAK 113
++ FKT LRFQSSAV A+QE EA V LFEDTN+CAIHAK
Sbjct: 61 LIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAK 115
>H3_PORAF (P84232) Histone H3
Length = 135
Score = 130 bits (327), Expect = 5e-31
Identities = 75/115 (65%), Positives = 82/115 (71%), Gaps = 3/115 (2%)
Query: 2 AGTKQTAR-NTGGKAPRKQLATKAARKSALAAGTVKKPHHFCHGTVALREIRNYQRSTS- 59
A TKQTAR +TGGKAPRKQLATKAARKSA A G VKKPH + GTVALREIR YQ+ST
Sbjct: 1 ARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTEL 60
Query: 60 -NKEASVSETCEGNCSGFKTGLRFQSSAVSAVQEVVEACFVSLFEDTNICAIHAK 113
++ FKT LRFQSSAV A+QE EA V LFEDTN+CAIHAK
Sbjct: 61 LIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAK 115
>H3_PLADU (P84235) Histone H3
Length = 135
Score = 130 bits (327), Expect = 5e-31
Identities = 75/115 (65%), Positives = 82/115 (71%), Gaps = 3/115 (2%)
Query: 2 AGTKQTAR-NTGGKAPRKQLATKAARKSALAAGTVKKPHHFCHGTVALREIRNYQRSTS- 59
A TKQTAR +TGGKAPRKQLATKAARKSA A G VKKPH + GTVALREIR YQ+ST
Sbjct: 1 ARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTEL 60
Query: 60 -NKEASVSETCEGNCSGFKTGLRFQSSAVSAVQEVVEACFVSLFEDTNICAIHAK 113
++ FKT LRFQSSAV A+QE EA V LFEDTN+CAIHAK
Sbjct: 61 LIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAK 115
>H3_ONCMY (P84234) Histone H3
Length = 135
Score = 130 bits (327), Expect = 5e-31
Identities = 75/115 (65%), Positives = 82/115 (71%), Gaps = 3/115 (2%)
Query: 2 AGTKQTAR-NTGGKAPRKQLATKAARKSALAAGTVKKPHHFCHGTVALREIRNYQRSTS- 59
A TKQTAR +TGGKAPRKQLATKAARKSA A G VKKPH + GTVALREIR YQ+ST
Sbjct: 1 ARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTEL 60
Query: 60 -NKEASVSETCEGNCSGFKTGLRFQSSAVSAVQEVVEACFVSLFEDTNICAIHAK 113
++ FKT LRFQSSAV A+QE EA V LFEDTN+CAIHAK
Sbjct: 61 LIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAK 115
>H3_ICTBU (P84231) Histone H3
Length = 135
Score = 130 bits (327), Expect = 5e-31
Identities = 75/115 (65%), Positives = 82/115 (71%), Gaps = 3/115 (2%)
Query: 2 AGTKQTAR-NTGGKAPRKQLATKAARKSALAAGTVKKPHHFCHGTVALREIRNYQRSTS- 59
A TKQTAR +TGGKAPRKQLATKAARKSA A G VKKPH + GTVALREIR YQ+ST
Sbjct: 1 ARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTEL 60
Query: 60 -NKEASVSETCEGNCSGFKTGLRFQSSAVSAVQEVVEACFVSLFEDTNICAIHAK 113
++ FKT LRFQSSAV A+QE EA V LFEDTN+CAIHAK
Sbjct: 61 LIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAK 115
>H3_DROME (P02299) Histone H3
Length = 135
Score = 130 bits (327), Expect = 5e-31
Identities = 75/115 (65%), Positives = 82/115 (71%), Gaps = 3/115 (2%)
Query: 2 AGTKQTAR-NTGGKAPRKQLATKAARKSALAAGTVKKPHHFCHGTVALREIRNYQRSTS- 59
A TKQTAR +TGGKAPRKQLATKAARKSA A G VKKPH + GTVALREIR YQ+ST
Sbjct: 1 ARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTEL 60
Query: 60 -NKEASVSETCEGNCSGFKTGLRFQSSAVSAVQEVVEACFVSLFEDTNICAIHAK 113
++ FKT LRFQSSAV A+QE EA V LFEDTN+CAIHAK
Sbjct: 61 LIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAK 115
>H3_DROHY (P84236) Histone H3
Length = 135
Score = 130 bits (327), Expect = 5e-31
Identities = 75/115 (65%), Positives = 82/115 (71%), Gaps = 3/115 (2%)
Query: 2 AGTKQTAR-NTGGKAPRKQLATKAARKSALAAGTVKKPHHFCHGTVALREIRNYQRSTS- 59
A TKQTAR +TGGKAPRKQLATKAARKSA A G VKKPH + GTVALREIR YQ+ST
Sbjct: 1 ARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTEL 60
Query: 60 -NKEASVSETCEGNCSGFKTGLRFQSSAVSAVQEVVEACFVSLFEDTNICAIHAK 113
++ FKT LRFQSSAV A+QE EA V LFEDTN+CAIHAK
Sbjct: 61 LIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAK 115
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.315 0.125 0.355
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,078,316
Number of Sequences: 164201
Number of extensions: 329811
Number of successful extensions: 1020
Number of sequences better than 10.0: 103
Number of HSP's better than 10.0 without gapping: 99
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 811
Number of HSP's gapped (non-prelim): 115
length of query: 113
length of database: 59,974,054
effective HSP length: 89
effective length of query: 24
effective length of database: 45,360,165
effective search space: 1088643960
effective search space used: 1088643960
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 58 (26.9 bits)
Medicago: description of AC127019.10