BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC126792.3 + phase: 0
(987 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
YLE1_SCHPO (Q10451) Hypothetical protein C1093.01 in chromosome I 68 1e-10
LPRC_HUMAN (P42704) 130 kDa leucine-rich protein (LRP 130) (GP13... 59 8e-08
PT09_YEAST (P32522) PET309 protein, mitochondrial precursor 52 1e-05
YD37_PYRAB (Q9UZ20) Hypothetical UPF0129 protein PYRAB13370 42 0.006
RPOM_MOUSE (Q8BKF1) DNA-directed RNA polymerase, mitochondrial p... 40 0.031
YG3M_YEAST (P48237) Hypothetical 101.4 kDa protein in RPL24B-RSR... 38 0.12
YZ19_METJA (Q60279) Hypothetical protein MJECL19 37 0.20
RPM2_YEAST (Q02773) Ribonuclease P protein component, mitochondr... 37 0.26
LIPA_RALSO (Q8Y2L3) Lipoyl synthase (EC 2.8.1.-) (Lipoic acid sy... 37 0.34
NU84_YEAST (P52891) Nucleoporin NUP84 (Nuclear pore protein NUP84) 36 0.58
LIPA_BORPA (Q7W222) Lipoyl synthase (EC 2.8.1.-) (Lipoic acid sy... 35 1.3
CI84_NEUCR (O42637) Complex I intermediate-associated protein 84... 35 1.3
YD45_METJA (Q58741) Hypothetical protein MJ1345 34 1.7
LIPA_CHRVO (Q7NTF9) Lipoyl synthase (EC 2.8.1.-) (Lipoic acid sy... 34 1.7
LIPA_BORPE (Q7W0K8) Lipoyl synthase (EC 2.8.1.-) (Lipoic acid sy... 34 2.2
LIPA_BORBR (Q7WR00) Lipoyl synthase (EC 2.8.1.-) (Lipoic acid sy... 34 2.2
RFC2_DROME (P53034) Activator 1 40 kDa subunit (Replication fact... 33 3.8
GAC1_CLOAB (P58251) Glutamyl-tRNA(Gln) amidotransferase subunit ... 33 4.9
EFTS_WOLSU (Q7MAK1) Elongation factor Ts (EF-Ts) 33 4.9
EF3_CANGA (O93796) Elongation factor 3 (EF-3) 32 6.4
>YLE1_SCHPO (Q10451) Hypothetical protein C1093.01 in chromosome I
Length = 1261
Score = 68.2 bits (165), Expect = 1e-10
Identities = 83/368 (22%), Positives = 145/368 (38%), Gaps = 31/368 (8%)
Query: 427 SNFARCLCGAGKFDQAFKIICEMMGKGFVPDDSTYSKVIGFLC---DASKVEKAFSLFEE 483
S+FAR + F K++ G++P ST++ +I D A ++FEE
Sbjct: 863 SSFARQFKSSNLFCDNMKML------GYIPRASTFAHLINNSTRRGDTDDATTALNIFEE 916
Query: 484 MKRNGIVPSVYTYTILIDSFCKAGLIQQARKWFDEMLHKGCTPNVVTYTALIHAYLKAKQ 543
KR+ + PSV+ Y ++ +A + K F EM G P VTY +I+A +
Sbjct: 917 TKRHNVKPSVFLYNAVLSKLGRARRTTECWKLFQEMKESGLLPTSVTYGTVINAACRIGD 976
Query: 544 MPVADELF-EMMLLEGCKPNVVTYTALIDGHCKA-GQIEKACQIYARM-RGDIESSDMDK 600
+A++LF EM +P V Y +I + EKA Y R+ DIE S
Sbjct: 977 ESLAEKLFAEMENQPNYQPRVAPYNTMIQFEVQTMFNREKALFYYNRLCATDIEPSSHTY 1036
Query: 601 YFKLDHNNCEGPNVITYGALVDGLCKANRVKEAHELLDTMLAHGCEPNQIVYDAVIDGFC 660
+D YG L VK EL++ + Y ++
Sbjct: 1037 KLLMD----------AYGTLKP--VNVGSVKAVLELMERTDVPILSMHYAAYIHILGNV- 1083
Query: 661 KIGKLQDAQEVF----TKMSERGYSPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLENSCT 716
+ +Q A + K + + S I+ L ++R+ ++++S M + +
Sbjct: 1084 -VSDVQAATSCYMNALAKHDAGEIQLDANLFQSQIESLIANDRIVEGIQIVSDMKRYNVS 1142
Query: 717 PNVVIYTEMVDGLCKIGKTDEAYKLMLKMEEKGCN-PNVVTYTAMIDGFGKSGKIEQCLE 775
N I ++ G K+G +A +E +G + TY M+ + + +E
Sbjct: 1143 LNAYIVNALIKGFTKVGMISKARYYFDLLECEGMSGKEPSTYENMVRAYLSVNDGRKAME 1202
Query: 776 LFRDMCSK 783
+ + K
Sbjct: 1203 IVEQLKRK 1210
Score = 67.4 bits (163), Expect = 2e-10
Identities = 60/254 (23%), Positives = 112/254 (43%), Gaps = 26/254 (10%)
Query: 717 PNVVIYTEMVDGLCKIGKTDEAYKLMLKMEEK---GCNPNVVTYTAMIDGFGKSGKIEQC 773
P + +++ + G TD+A + EE P+V Y A++ G++ + +C
Sbjct: 886 PRASTFAHLINNSTRRGDTDDATTALNIFEETKRHNVKPSVFLYNAVLSKLGRARRTTEC 945
Query: 774 LELFRDMCSKGCAPNFITYRVLINHCCSNGLLDEAYKLLDEMK-QTYWPKHILSHRKIIE 832
+LF++M G P +TY +IN C G A KL EM+ Q + + + +I+
Sbjct: 946 WKLFQEMKESGLLPTSVTYGTVINAACRIGDESLAEKLFAEMENQPNYQPRVAPYNTMIQ 1005
Query: 833 GFSQEFIT---SIGLLDELSENESVPVDSLYRILIDNY-----IKAGRLEVALDLLE--E 882
Q ++ + L + P Y++L+D Y + G ++ L+L+E +
Sbjct: 1006 FEVQTMFNREKALFYYNRLCATDIEPSSHTYKLLMDAYGTLKPVNVGSVKAVLELMERTD 1065
Query: 883 ISSSPSHAVSNKYLYASLIENLSH-ASKVDKALELYASMISKNVVPELSILVHL----IK 937
+ H YA+ I L + S V A Y + ++K+ E+ + +L I+
Sbjct: 1066 VPILSMH-------YAAYIHILGNVVSDVQAATSCYMNALAKHDAGEIQLDANLFQSQIE 1118
Query: 938 GLIKVDKWQEALQL 951
LI D+ E +Q+
Sbjct: 1119 SLIANDRIVEGIQI 1132
Score = 62.8 bits (151), Expect = 4e-09
Identities = 71/318 (22%), Positives = 120/318 (37%), Gaps = 40/318 (12%)
Query: 296 AMDILHRMRSSSCIPNVVTYRILLSGCLRKGQLGRCKRILSMMITEGCYPNREIFNSLIH 355
A++I + + P+V Y +LS R + C ++ M G P + ++I+
Sbjct: 910 ALNIFEETKRHNVKPSVFLYNAVLSKLGRARRTTECWKLFQEMKESGLLPTSVTYGTVIN 969
Query: 356 AYCKSRDYSYAYKLFKKM-IKCGCQPGYLVYNIFI-----------------GSVCSNEE 397
A C+ D S A KLF +M + QP YN I +C+ +
Sbjct: 970 AACRIGDESLAEKLFAEMENQPNYQPRVAPYNTMIQFEVQTMFNREKALFYYNRLCATDI 1029
Query: 398 QPSSDILDLVEKAYSEMLDLGVVLNKVNVSNFARC--------------LCGAGKFDQAF 443
+PSS L+ AY + + V K + R + G D
Sbjct: 1030 EPSSHTYKLLMDAYGTLKPVNVGSVKAVLELMERTDVPILSMHYAAYIHILGNVVSDVQA 1089
Query: 444 KIICEMMGKG------FVPDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYT 497
C M D + + I L ++ + + +MKR + + Y
Sbjct: 1090 ATSCYMNALAKHDAGEIQLDANLFQSQIESLIANDRIVEGIQIVSDMKRYNVSLNAYIVN 1149
Query: 498 ILIDSFCKAGLIQQARKWFDEMLHKGCT-PNVVTYTALIHAYLKAKQMPVADELFEMMLL 556
LI F K G+I +AR +FD + +G + TY ++ AYL A E+ E +
Sbjct: 1150 ALIKGFTKVGMISKARYYFDLLECEGMSGKEPSTYENMVRAYLSVNDGRKAMEIVEQLKR 1209
Query: 557 EGCK-PNVVTYTALIDGH 573
+ P V ++L++ H
Sbjct: 1210 KRYPLPVVNRISSLVNSH 1227
Score = 52.0 bits (123), Expect = 8e-06
Identities = 71/369 (19%), Positives = 154/369 (41%), Gaps = 37/369 (10%)
Query: 533 ALIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDGHCKAGQIEKACQIYARMRGD 592
A+I + A+Q ++ + M + G P T+ LI+ + G + A
Sbjct: 858 AMILSSSFARQFKSSNLFCDNMKMLGYIPRASTFAHLINNSTRRGDTDDA---------- 907
Query: 593 IESSDMDKYFKLDHNNCEGPNVITYGALVDGLCKANRVKEAHELLDTMLAHGCEPNQIVY 652
++ ++ + + +N + P+V Y A++ L +A R E +L M G P + Y
Sbjct: 908 --TTALNIFEETKRHNVK-PSVFLYNAVLSKLGRARRTTECWKLFQEMKESGLLPTSVTY 964
Query: 653 DAVIDGFCKIGKLQDAQEVFTKM-SERGYSPNLYTYSSFIDCLFKD--NRLDLVLKVLSK 709
VI+ C+IG A+++F +M ++ Y P + Y++ I + NR + L ++
Sbjct: 965 GTVINAACRIGDESLAEKLFAEMENQPNYQPRVAPYNTMIQFEVQTMFNR-EKALFYYNR 1023
Query: 710 MLENSCTPNVVIYTEMVDGLCKIGKTD-EAYKLMLKMEEKGCNPNV-VTYTAMIDGFGK- 766
+ P+ Y ++D + + + K +L++ E+ P + + Y A I G
Sbjct: 1024 LCATDIEPSSHTYKLLMDAYGTLKPVNVGSVKAVLELMERTDVPILSMHYAAYIHILGNV 1083
Query: 767 SGKIEQCLELFRDMCSKGCAPNF----ITYRVLINHCCSNGLLDEAYKLLDEMKQTYWPK 822
++ + + +K A ++ I +N + E +++ +MK+
Sbjct: 1084 VSDVQAATSCYMNALAKHDAGEIQLDANLFQSQIESLIANDRIVEGIQIVSDMKRYNVSL 1143
Query: 823 HILSHRKIIEGFSQEFITSIGLLDEL--------SENESVPVDSLYRILIDNYIKAGRLE 874
+ +I+GF T +G++ + E S S Y ++ Y+
Sbjct: 1144 NAYIVNALIKGF-----TKVGMISKARYYFDLLECEGMSGKEPSTYENMVRAYLSVNDGR 1198
Query: 875 VALDLLEEI 883
A++++E++
Sbjct: 1199 KAMEIVEQL 1207
Score = 39.3 bits (90), Expect = 0.052
Identities = 73/324 (22%), Positives = 127/324 (38%), Gaps = 21/324 (6%)
Query: 193 ALEELGRLKDFGYKPSQTTYNALIQVFLRADKLDTAYLVKREMLSYAFVMDRYTLSCFAY 252
AL K KPS YNA++ RA + + + +EM + T
Sbjct: 910 ALNIFEETKRHNVKPSVFLYNAVLSKLGRARRTTECWKLFQEMKESGLLPTSVTYGTVIN 969
Query: 253 SLCKGGKCREAFDLIDEAE---DFVPDTVFYNRMVSGLCEASL-FEEAMDILHRMRSSSC 308
+ C+ G A L E E ++ P YN M+ + E+A+ +R+ ++
Sbjct: 970 AACRIGDESLAEKLFAEMENQPNYQPRVAPYNTMIQFEVQTMFNREKALFYYNRLCATDI 1029
Query: 309 IPNVVTYRILLS--GCLRKGQLGRCKRILSMMITEGCYPNREIFNSLIHAYCK-SRDYSY 365
P+ TY++L+ G L+ +G K +L +M + + IH D
Sbjct: 1030 EPSSHTYKLLMDAYGTLKPVNVGSVKAVLELMERTDVPILSMHYAAYIHILGNVVSDVQA 1089
Query: 366 AYKLF-KKMIKCGCQPGYLVYNIFIGSVCSNEEQPSSDILDLVEKAYSEMLDLGVVLNKV 424
A + + K L N+F + E ++D + + S+M V LN
Sbjct: 1090 ATSCYMNALAKHDAGEIQLDANLFQSQI---ESLIANDRIVEGIQIVSDMKRYNVSLNAY 1146
Query: 425 NVSNFARCLCGAGKFDQA---FKII-CE-MMGKGFVPDDSTYSKVIGFLCDASKVEKAFS 479
V+ + G +A F ++ CE M GK + STY ++ + KA
Sbjct: 1147 IVNALIKGFTKVGMISKARYYFDLLECEGMSGK----EPSTYENMVRAYLSVNDGRKAME 1202
Query: 480 LFEEMKRNGI-VPSVYTYTILIDS 502
+ E++KR +P V + L++S
Sbjct: 1203 IVEQLKRKRYPLPVVNRISSLVNS 1226
>LPRC_HUMAN (P42704) 130 kDa leucine-rich protein (LRP 130) (GP130)
(Leucine-rich PPR-motif containing protein)
Length = 1273
Score = 58.5 bits (140), Expect = 8e-08
Identities = 122/573 (21%), Positives = 218/573 (37%), Gaps = 111/573 (19%)
Query: 473 KVEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQARKWFDEMLHKGCTPNVVTYT 532
+ E A +++ +++ G V V Y L+ + + + +M PN VTY
Sbjct: 21 RTEFAHRIWDTLQKLGAVYDVSHYNALLKVYLQNEYKFSPTDFLAKMEEANIQPNRVTYQ 80
Query: 533 ALIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDGHCKAGQIEKACQIYARMRGD 592
LI +Y + A ++ M + ++AL+ GH +AG +E A I MR
Sbjct: 81 RLIASYCNVGDIEGASKILGFMKTKDLPVTEAVFSALVTGHARAGDMENAENILTVMR-- 138
Query: 593 IESSDMDKYFKLDHNNCEGPNVITYGALVDGLCK---ANRVKEAHELLDTMLAHGCEPNQ 649
D GP+ TY AL++ + + VK+ E ++ H + +
Sbjct: 139 ------------DAGIEPGPD--TYLALLNAYAEKGDIDHVKQTLEKVEKFELHLMDRDL 184
Query: 650 IVYDAVIDGFCKIGKLQDAQEVFTKMS-ERGYSPNLYTYSSFIDCLFKDNRLDLVLKVL- 707
+ +I F K G L +Q+ + K + ER Y P+ + I L + D+ L++L
Sbjct: 185 L---QIIFSFSKAGYLSMSQKFWKKFTCERRYIPDA---MNLILLLVTEKLEDVALQILL 238
Query: 708 --------------SKMLENSCTPNVVIYTEMVDGLCK---------------------I 732
S L++ T N + E + CK
Sbjct: 239 ACPVSKEDGPSVFGSFFLQHCVTMNTPV--EKLTDYCKKLKEVQMHSFPLQFTLHCALLA 296
Query: 733 GKTDEAYKLMLKMEEKGCNPNVVTYTAMIDGFGKSGKIEQCLELFRDMCSKGCAPNFITY 792
KTD A LM ++E+G + ++ G K ++ +E+ + M G P+ TY
Sbjct: 297 NKTDLAKALMKAVKEEGFPIRPHYFWPLLVGRRKEKNVQGIIEILKGMQELGVHPDQETY 356
Query: 793 RVLINHCCSNGLLDEAYKLLDEMKQTYWPKHILSHRKIIEGFSQEFITSIGLLDEL---- 848
+ C + ++ A +L E LS + + G LD +
Sbjct: 357 TDYVIPCFDS--VNSARAILQE-------NGCLSDSDMFSQAGLRSEAANGNLDFVLSFL 407
Query: 849 -SENESVPVDSLYRILIDNYIKAGRLEVALDLLE---------EISSSPSHAVSNKYLYA 898
S + + S+ L+ + ++ + V ++ E + P+ AV N +LY
Sbjct: 408 KSNTLPISLQSIRSSLLLGFRRSMNINVWSEITELLYKDGRYCQEPRGPTEAVGN-FLY- 465
Query: 899 SLIENLS---------HASKVDKALELYASMISKNV------------VPELSILVHLIK 937
+LI+++S H + LE I +N+ VPEL HL+
Sbjct: 466 NLIDSMSDSEVQAKEEHLRQYFHQLEKMNVKIPENIYRGIRNLLESYHVPELIKDAHLLV 525
Query: 938 GLIKVDKWQEALQLSDSICQMVCLTLSQTFQPL 970
+D +Q+ +QL+ S + TL QP+
Sbjct: 526 ERKNLD-FQKTVQLTSSELESTLETLKAENQPI 557
Score = 53.5 bits (127), Expect = 3e-06
Identities = 34/154 (22%), Positives = 64/154 (41%)
Query: 618 GALVDGLCKANRVKEAHELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMSE 677
G+L+ L R + AH + DT+ G + Y+A++ + + + KM E
Sbjct: 10 GSLLPELKLEERTEFAHRIWDTLQKLGAVYDVSHYNALLKVYLQNEYKFSPTDFLAKMEE 69
Query: 678 RGYSPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGLCKIGKTDE 737
PN TY I ++ K+L M +++ +V G + G +
Sbjct: 70 ANIQPNRVTYQRLIASYCNVGDIEGASKILGFMKTKDLPVTEAVFSALVTGHARAGDMEN 129
Query: 738 AYKLMLKMEEKGCNPNVVTYTAMIDGFGKSGKIE 771
A ++ M + G P TY A+++ + + G I+
Sbjct: 130 AENILTVMRDAGIEPGPDTYLALLNAYAEKGDID 163
Score = 53.5 bits (127), Expect = 3e-06
Identities = 28/122 (22%), Positives = 59/122 (47%), Gaps = 1/122 (0%)
Query: 589 MRGDIESSDMDKYFKLDHNNCEGPNVITYGALVDGLCKANRVKEAHELLDTMLAHGCEPN 648
++ + + S D K++ N + PN +TY L+ C ++ A ++L M
Sbjct: 52 LQNEYKFSPTDFLAKMEEANIQ-PNRVTYQRLIASYCNVGDIEGASKILGFMKTKDLPVT 110
Query: 649 QIVYDAVIDGFCKIGKLQDAQEVFTKMSERGYSPNLYTYSSFIDCLFKDNRLDLVLKVLS 708
+ V+ A++ G + G +++A+ + T M + G P TY + ++ + +D V + L
Sbjct: 111 EAVFSALVTGHARAGDMENAENILTVMRDAGIEPGPDTYLALLNAYAEKGDIDHVKQTLE 170
Query: 709 KM 710
K+
Sbjct: 171 KV 172
Score = 52.4 bits (124), Expect = 6e-06
Identities = 28/111 (25%), Positives = 53/111 (47%)
Query: 707 LSKMLENSCTPNVVIYTEMVDGLCKIGKTDEAYKLMLKMEEKGCNPNVVTYTAMIDGFGK 766
L+KM E + PN V Y ++ C +G + A K++ M+ K ++A++ G +
Sbjct: 64 LAKMEEANIQPNRVTYQRLIASYCNVGDIEGASKILGFMKTKDLPVTEAVFSALVTGHAR 123
Query: 767 SGKIEQCLELFRDMCSKGCAPNFITYRVLINHCCSNGLLDEAYKLLDEMKQ 817
+G +E + M G P TY L+N G +D + L+++++
Sbjct: 124 AGDMENAENILTVMRDAGIEPGPDTYLALLNAYAEKGDIDHVKQTLEKVEK 174
Score = 45.1 bits (105), Expect = 0.001
Identities = 32/144 (22%), Positives = 59/144 (40%), Gaps = 1/144 (0%)
Query: 274 VPDTVFYNRMVSGLCEASLFEEAMDILHRMRSSSCIPNVVTYRILLSGCLRKGQLGRCKR 333
V D YN ++ + D L +M ++ PN VTY+ L++ G + +
Sbjct: 38 VYDVSHYNALLKVYLQNEYKFSPTDFLAKMEEANIQPNRVTYQRLIASYCNVGDIEGASK 97
Query: 334 ILSMMITEGCYPNREIFNSLIHAYCKSRDYSYAYKLFKKMIKCGCQPGYLVYNIFIGSVC 393
IL M T+ +F++L+ + ++ D A + M G +PG Y + +
Sbjct: 98 ILGFMKTKDLPVTEAVFSALVTGHARAGDMENAENILTVMRDAGIEPGPDTYLALLNAYA 157
Query: 394 SNEE-QPSSDILDLVEKAYSEMLD 416
+ L+ VEK ++D
Sbjct: 158 EKGDIDHVKQTLEKVEKFELHLMD 181
Score = 44.3 bits (103), Expect = 0.002
Identities = 118/611 (19%), Positives = 223/611 (36%), Gaps = 76/611 (12%)
Query: 345 PNREIFNSLIHAYCKSRDYSYAYKLFKKMIKCGCQPGYLVYNIFIGSVCSNEEQPSSDIL 404
P R++ LI C + A +L K GY I C +++ D L
Sbjct: 556 PIRDVLKQLILVLCSEENMQKALELKAKYESDMVTGGYAA---LINLCCRHDKV--EDAL 610
Query: 405 DLVEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDQAFKIICEMMGKGFVPDDSTYSKV 464
+L E+ + LD VL+ N R L GK A KI+ EM K + D+T
Sbjct: 611 NLKEEF--DRLDSSAVLDTGNYLGLVRVLAKHGKLQDAIKILKEMKEKDVLIKDTT---- 664
Query: 465 IGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQARKWFDEM----L 520
A S F + + + T L ++ GL + + + L
Sbjct: 665 ------------ALSFFHMLNGAALRGEIETVKQLHEAIVTLGLAEPSTNISFPLVTVHL 712
Query: 521 HKGCTPNVVTYTALIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDGHCKAGQIE 580
KG + I Y K K +P ++ ++ +G + I+
Sbjct: 713 EKGDLSTAL--EVAIDCYEKYKVLPRIHDVLCKLVEKG----------------ETDLIQ 754
Query: 581 KACQIYARMRGDIESSDMDKYF--------KLDHNNCEGPNVITYGALVDGLCKA----N 628
KA ++ +G++ D +F K E P + A + C N
Sbjct: 755 KAMDFVSQEQGEMVML-YDLFFAFLQTGNYKEAKKIIETPGIRARSARLQWFCDRCVANN 813
Query: 629 RVKEAHELLD-TMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMSERGYSPNLYTY 687
+V+ +L++ T C+ +Q+ Y+ ++ + G Q A V+ K+ E P T
Sbjct: 814 QVETLEKLVELTQKLFECDRDQMYYN-LLKLYKINGDWQRADAVWNKIQEENVIPREKTL 872
Query: 688 SSFIDCLFKDNRLDLVLKVLSKMLE------NSCTPNVVIYTEMVDGL--CKIGKTDEAY 739
+ L + N+ ++ V E NS + + D L C++ + AY
Sbjct: 873 RLLAEILREGNQ-EVPFDVPELWYEDEKHSLNSSSASTTEPDFQKDILIACRLNQKKGAY 931
Query: 740 KLMLKMEEKGCNPNVVTYTAMIDGFGKSGKIEQCLEL--FRDMCSKGCAPN-FITYRVLI 796
+ L +E+ N TY+ +I Q +E+ F + KG N R++I
Sbjct: 932 DIFLNAKEQNIVFNAETYSNLIKLLMSEDYFTQAMEVKAFAETHIKGFTLNDAANSRLII 991
Query: 797 NHCCSNGLLDEAYKLLDEMKQTYWPKHILSHRKIIEGFSQEFITSIGLLDELSENESVPV 856
+ L + L + Q P + R I + + +I ++ ++ +
Sbjct: 992 TQVRRDYLKEAVTTLKTVLDQQQTPSRLAVTRVIQALAMKGDVENIEVVQKMLNGLEDSI 1051
Query: 857 DSLYRILIDN----YIKAGRLEVALDLLEEISSSPSHAVSNKYLYASLIENLSHASKVDK 912
+ I+N IK ++ A++ +E + +S + + +Y + + +++
Sbjct: 1052 GLSKMVFINNIALAQIKNNNIDAAIENIENMLTSENKVIEPQYFGLAYLFRKVIEEQLEP 1111
Query: 913 ALELYASMISK 923
A+E + M +
Sbjct: 1112 AVEKISIMAER 1122
Score = 43.1 bits (100), Expect = 0.004
Identities = 34/156 (21%), Positives = 68/156 (42%), Gaps = 8/156 (5%)
Query: 365 YAYKLFKKMIKCGCQPGYLVYNIFIGSVCSNEEQPS-SDILDLVEKAYSEMLDLGVVLNK 423
+A++++ + K G YN + NE + S +D L +E+A + N+
Sbjct: 24 FAHRIWDTLQKLGAVYDVSHYNALLKVYLQNEYKFSPTDFLAKMEEA-------NIQPNR 76
Query: 424 VNVSNFARCLCGAGKFDQAFKIICEMMGKGFVPDDSTYSKVIGFLCDASKVEKAFSLFEE 483
V C G + A KI+ M K ++ +S ++ A +E A ++
Sbjct: 77 VTYQRLIASYCNVGDIEGASKILGFMKTKDLPVTEAVFSALVTGHARAGDMENAENILTV 136
Query: 484 MKRNGIVPSVYTYTILIDSFCKAGLIQQARKWFDEM 519
M+ GI P TY L++++ + G I ++ +++
Sbjct: 137 MRDAGIEPGPDTYLALLNAYAEKGDIDHVKQTLEKV 172
Score = 43.1 bits (100), Expect = 0.004
Identities = 29/118 (24%), Positives = 51/118 (42%), Gaps = 6/118 (5%)
Query: 446 ICEMMGKGFVPDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYTILIDSFCK 505
+ +M P+ TY ++I C+ +E A + MK + + ++ L+ +
Sbjct: 64 LAKMEEANIQPNRVTYQRLIASYCNVGDIEGASKILGFMKTKDLPVTEAVFSALVTGHAR 123
Query: 506 AGLIQQARKWFDEMLHKGCTPNVVTYTALIHAYLK------AKQMPVADELFEMMLLE 557
AG ++ A M G P TY AL++AY + KQ E FE+ L++
Sbjct: 124 AGDMENAENILTVMRDAGIEPGPDTYLALLNAYAEKGDIDHVKQTLEKVEKFELHLMD 181
>PT09_YEAST (P32522) PET309 protein, mitochondrial precursor
Length = 965
Score = 51.6 bits (122), Expect = 1e-05
Identities = 87/484 (17%), Positives = 176/484 (35%), Gaps = 62/484 (12%)
Query: 488 GIVPSVYTYTILIDSFCKAGLIQQARKWFDEMLHKGCTPNVVTYTALIHAYLKAKQMPVA 547
G +PS+ Y IL+ + + G + K + ++L +G P +L++A+ K
Sbjct: 341 GKLPSIQHYGILMYTMARIGELDSVNKLYTQLLRRGMIPTYAVLQSLLYAHYKVGDFAAC 400
Query: 548 DELFEMMLLEGCKPNVVTYTALIDGHCKAGQIEKACQIYARMRGDIESSDMDKYFKLDHN 607
FE+ P+ T+T ++ + ++ A +I R+ D + +F L
Sbjct: 401 FSHFELFKKYDITPSTATHTIMLKVYRGLNDLDGAFRILKRLSEDPSVEITEGHFALLIQ 460
Query: 608 NC----------EGPNVIT-----------YGALVDGLCKANRVKEAHELLDTMLAHGCE 646
C E N++T AL+D ++NR EA L + +
Sbjct: 461 MCCKTTNHLIAQELFNLMTEHYNIQHTGKSISALMDVYIESNRPTEAIALFEKHSKNLSW 520
Query: 647 PNQI--VYDAVIDGFCKIGKLQDAQEVFTKMSERGYSPNLYTYSSFIDCLFKDNR-LDLV 703
+ + VY+ I + + +E+F K++ + N Y I L N +
Sbjct: 521 RDGLISVYNKAIKAYIGLRNANKCEELFDKITTSKLAVNSEFYKMMIKFLVTLNEDCETA 580
Query: 704 LKVLSKMLENSCTPNVVIYTEMV-DGLCKIGKTDEAYKLMLKMEEKGCNPNVVTYTAMID 762
L ++ +++++S + E++ + K G D L M + N ++
Sbjct: 581 LSIIDQLIKHSVIKVDATHFEIIMEAYDKEGYRDGIINLYKTMSQNKVPANSKILYYILK 640
Query: 763 GFGKSG-----KIEQCLELFRDMCSKGCAPNFITYRVLINHCCSNGLLDEAYKLLDEMKQ 817
K +I++ + + D+ +NG LD Y L
Sbjct: 641 AVAKKSLQNNEEIKETINMVEDIMEN----------------AANGTLDVTYNKLHPSVM 684
Query: 818 TYWPKHIL----SHRKIIEGFSQEFITSIGLLDELSENESVPVDSLYRILIDNYIKAGRL 873
WP ++ S ++ +E +++ D +S N + +L+ +
Sbjct: 685 A-WPMRMIVKHDSPQRALELYNRYNELFFKKHDWISNNNKFVMMRSLLVLLAQIEQWKDF 743
Query: 874 EVA----LDLLEEISSSPSHAVSN-------KYLYASLIENLSHASKVDKALELYASMIS 922
E +D +E I + PS N L+ + L +K+D+ L+ +
Sbjct: 744 ETLFAKYMDRIENIENLPSSTTPNIKLRSIFSGLFPYKVSQLIAMNKIDELPLLWKKLRE 803
Query: 923 KNVV 926
K +
Sbjct: 804 KGFI 807
Score = 41.2 bits (95), Expect = 0.014
Identities = 56/334 (16%), Positives = 130/334 (38%), Gaps = 17/334 (5%)
Query: 645 CEPNQIVYDA----VIDGFCKIGKLQDAQEVFTKMSERGYSPNLYTYSSFIDCLFKDNRL 700
CE N + + ++ +C + K + K + + N + Y L +RL
Sbjct: 270 CEHNLPIVSSDLTCILKTYCHMQKFNLVSSTYWKYPDAQHDQNQFDY-----LLVAHSRL 324
Query: 701 ---DLVLKVLSKMLENSCTPNVVIYTEMVDGLCKIGKTDEAYKLMLKMEEKGCNPNVVTY 757
D + + + + P++ Y ++ + +IG+ D KL ++ +G P
Sbjct: 325 HNWDALQQQFNALFGIGKLPSIQHYGILMYTMARIGELDSVNKLYTQLLRRGMIPTYAVL 384
Query: 758 TAMIDGFGKSGKIEQCLELFRDMCSKGCAPNFITYRVLINHCCSNGLLDEAYKLLDEMKQ 817
+++ K G C F P+ T+ +++ LD A+++L + +
Sbjct: 385 QSLLYAHYKVGDFAACFSHFELFKKYDITPSTATHTIMLKVYRGLNDLDGAFRILKRLSE 444
Query: 818 TYWPKHILSHRKIIEGF---SQEFITSIGLLDELSENESVP-VDSLYRILIDNYIKAGRL 873
+ H ++ + + + L + ++E+ ++ L+D YI++ R
Sbjct: 445 DPSVEITEGHFALLIQMCCKTTNHLIAQELFNLMTEHYNIQHTGKSISALMDVYIESNRP 504
Query: 874 EVALDLLEEISSSPSHAVSNKYLYASLIENLSHASKVDKALELYASMISKNVVPELSILV 933
A+ L E+ S + S +Y I+ +K EL+ + + +
Sbjct: 505 TEAIALFEKHSKNLSWRDGLISVYNKAIKAYIGLRNANKCEELFDKITTSKLAVNSEFYK 564
Query: 934 HLIKGLIKVDK-WQEALQLSDSICQMVCLTLSQT 966
+IK L+ +++ + AL + D + + + + T
Sbjct: 565 MMIKFLVTLNEDCETALSIIDQLIKHSVIKVDAT 598
Score = 37.7 bits (86), Expect = 0.15
Identities = 18/81 (22%), Positives = 38/81 (46%)
Query: 309 IPNVVTYRILLSGCLRKGQLGRCKRILSMMITEGCYPNREIFNSLIHAYCKSRDYSYAYK 368
+P++ Y IL+ R G+L ++ + ++ G P + SL++A+ K D++ +
Sbjct: 343 LPSIQHYGILMYTMARIGELDSVNKLYTQLLRRGMIPTYAVLQSLLYAHYKVGDFAACFS 402
Query: 369 LFKKMIKCGCQPGYLVYNIFI 389
F+ K P + I +
Sbjct: 403 HFELFKKYDITPSTATHTIML 423
>YD37_PYRAB (Q9UZ20) Hypothetical UPF0129 protein PYRAB13370
Length = 161
Score = 42.4 bits (98), Expect = 0.006
Identities = 43/133 (32%), Positives = 62/133 (46%), Gaps = 20/133 (15%)
Query: 822 KHILSHRKIIEGFSQEFITSIGLLDELSENESVPVDSLYRILIDNYIKAGRLEVALDLLE 881
K +L I+G E T+ ++DE+ + ES RIL+++ I +G+++V
Sbjct: 6 KLVLDSSVFIQGLDIEGYTTPKVVDEVKDRES-------RILLESLISSGKVKVV----- 53
Query: 882 EISSSPSHAVSNKYLYASLIENLSHASKVDKAL--ELYASMIS-----KNVVPELSILVH 934
E S AV N L IE LS A AL EL A + S +NV L +
Sbjct: 54 EPSKEALRAVKNAALKTGEIEELSEADLEVLALAYELKAEVFSDDYNVQNVARILGLKFR 113
Query: 935 LIK-GLIKVDKWQ 946
+K G+ KV KWQ
Sbjct: 114 TLKRGIKKVIKWQ 126
>RPOM_MOUSE (Q8BKF1) DNA-directed RNA polymerase, mitochondrial
precursor (EC 2.7.7.6) (MtRPOL)
Length = 1207
Score = 40.0 bits (92), Expect = 0.031
Identities = 25/102 (24%), Positives = 55/102 (53%), Gaps = 5/102 (4%)
Query: 629 RVKEAHELLDTMLAHGCEPNQI---VYDAVIDGFCKIGKLQDAQEVFTKMSERGYSPNLY 685
+V AH +L T +G + +Y+ V+ G+ + G ++ VF + + G SP+L
Sbjct: 210 QVPLAHHVLVTHHNNGDRQQVLTLHMYNTVMLGWARKGSFRELVYVFLMLKDAGLSPDLC 269
Query: 686 TYSSFIDCL-FKDNRLDLVLKVLSKMLENSCTPNVVIYTEMV 726
+Y++ + C+ +D + + + L +M+E P +++T++V
Sbjct: 270 SYAAALQCMGRRDQDVRTIQRCLKQMMEEGFQPQ-LLFTDLV 310
>YG3M_YEAST (P48237) Hypothetical 101.4 kDa protein in RPL24B-RSR1
intergenic region
Length = 864
Score = 38.1 bits (87), Expect = 0.12
Identities = 37/141 (26%), Positives = 59/141 (41%), Gaps = 14/141 (9%)
Query: 438 KFDQAFKIICEMMGK--GFVPDDSTYSKVIGFLCDASKVEKAFSLFEEMKR--------N 487
++D+A KI E + K GF ++ I L + K S F +M
Sbjct: 257 RYDKALKITEERINKKEGFPSKVPKMTQAI--LNNCLKYSTKCSSFHDMDYFITKFRDDY 314
Query: 488 GIVPSVYTYTILIDSFCKAGLIQQARKWFDEM--LHKGCTPNVVTYTALIHAYLKAKQMP 545
GI P+ T +I + + + +QA FD M L P++ TY ++ K + P
Sbjct: 315 GITPNKQNLTTVIQFYSRKEMTKQAWNTFDTMKFLSTKHFPDICTYNTMLRICEKERNFP 374
Query: 546 VADELFEMMLLEGCKPNVVTY 566
A +LF+ + KP TY
Sbjct: 375 KALDLFQEIQDHNIKPTTNTY 395
>YZ19_METJA (Q60279) Hypothetical protein MJECL19
Length = 174
Score = 37.4 bits (85), Expect = 0.20
Identities = 41/180 (22%), Positives = 84/180 (45%), Gaps = 22/180 (12%)
Query: 745 MEEKGCNPNVVTYTAMIDGFGKSGKI-----EQCLELFRDMCSKGCAPNFITYRVLINHC 799
ME K + + + +M KS KI E+ + F D K +RVL+
Sbjct: 1 MESKEFDDDKIKIISMTPKSEKSDKIVMQIVEEFINSFPDDRYK--------FRVLLKVA 52
Query: 800 ---CSNGLLDEAYKLLDEMKQTYWPKHILSHRKIIEGFSQEFITSIGLLDELSENESVPV 856
C NGL +EA+ +LD++ +Y+ L I ++E I + +++ ++
Sbjct: 53 ELICKNGLCNEAFLILDKIPDSYYKSSALYKMADILYRNKEHDRLIQIAEKIPDD--YKK 110
Query: 857 DSLYRILIDNYIKAGRLEVALDLLEEISSSPSHAVSNKYLYASLIENLSHASKVDKALEL 916
+ +++ ++G+ + A+++ E+I P + ++ L+ + E LS+ DKA+E+
Sbjct: 111 SEVLLKVVELLCESGKYDEAINIAEKI---PDNYYKSEALF-KIAETLSNKGYYDKAVEI 166
Score = 32.0 bits (71), Expect = 8.4
Identities = 24/94 (25%), Positives = 49/94 (51%), Gaps = 6/94 (6%)
Query: 655 VIDGFCKIGKLQDAQEVFTKMSERGY-SPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLEN 713
V + CK G +A + K+ + Y S LY + D L+++ D ++++ K+ ++
Sbjct: 51 VAELICKNGLCNEAFLILDKIPDSYYKSSALYKMA---DILYRNKEHDRLIQIAEKIPDD 107
Query: 714 SCTPNVVIYTEMVDGLCKIGKTDEAYKLMLKMEE 747
V++ ++V+ LC+ GK DEA + K+ +
Sbjct: 108 YKKSEVLL--KVVELLCESGKYDEAINIAEKIPD 139
>RPM2_YEAST (Q02773) Ribonuclease P protein component, mitochondrial
precursor (EC 3.1.26.5) (RNase P)
Length = 1202
Score = 37.0 bits (84), Expect = 0.26
Identities = 27/91 (29%), Positives = 46/91 (49%), Gaps = 12/91 (13%)
Query: 476 KAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQARKWFDEMLHKGCTPNVVTYTALI 535
K SL++ +KRN IVP + +T ++DS CK L D +++ T Y +I
Sbjct: 205 KINSLYQSLKRNDIVPPLEIFTKVLDSLCKRPLDNND---LDNKMYELLT----CYQDMI 257
Query: 536 HAYLKAKQMPVADELFEMMLLEGCKPNVVTY 566
+ LK DE++ ++LL K +++ Y
Sbjct: 258 NNRLKP-----PDEIYNIVLLSLFKGSILAY 283
>LIPA_RALSO (Q8Y2L3) Lipoyl synthase (EC 2.8.1.-) (Lipoic acid
synthase) (Lipoate synthase) (Lipoyl-acyl-carrier
protein synthase) (Sulfur insertion protein lipA)
(Lip-syn)
Length = 333
Score = 36.6 bits (83), Expect = 0.34
Identities = 30/106 (28%), Positives = 52/106 (48%), Gaps = 17/106 (16%)
Query: 690 FIDCLFKDNRLDLVLKV----------LSKMLE--NSCTPNVVIYT-EMVDGLCKIGK-- 734
++DC+ + L ++ L K L+ +C P+V+ + E V L K +
Sbjct: 161 YVDCISRTRELSPATRIEVLVPDFRGRLEKALDILQACPPDVMNHNMETVPRLYKQARPG 220
Query: 735 TDEAYKLMLKMEEKGCNPNVVTYTAMIDGFGKSGKIEQCLELFRDM 780
D A+ L L + K NPN+ T + ++ G G++ E+ LE+ RDM
Sbjct: 221 ADYAHSLKLLKDFKARNPNLPTKSGLMVGLGETD--EEILEVMRDM 264
>NU84_YEAST (P52891) Nucleoporin NUP84 (Nuclear pore protein NUP84)
Length = 726
Score = 35.8 bits (81), Expect = 0.58
Identities = 35/156 (22%), Positives = 66/156 (41%), Gaps = 21/156 (13%)
Query: 801 SNGLLDEAYKLLDEMKQTYWPKHILSHRKIIEGFSQEFITSIGLLDELSENESVPVDSLY 860
SN L ++ DE +Q Y P + +S + I + L E + VD+++
Sbjct: 473 SNILRRTTQRVFDETEQEYSPSNEISISFDVNNIDMHLIYGVEWLIE----GKLYVDAVH 528
Query: 861 RI--LIDNYIKAGRLEVALDLLEEISSSPSHAVSNKYLYASLIENLSHASKVDKALELYA 918
I L ++ GR++ +E + + Y + +N+S D+ LE
Sbjct: 529 SIIALSRRFLLNGRVKALEQFMERNNIGE---ICKNYELEKIADNISKDENEDQFLE--- 582
Query: 919 SMISKNVVPELSILVHLIKGLIKVDKWQEALQLSDS 954
E++ HLIKG+ + ++WQ+++ L S
Sbjct: 583 ---------EITQYEHLIKGIREYEEWQKSVSLLSS 609
>LIPA_BORPA (Q7W222) Lipoyl synthase (EC 2.8.1.-) (Lipoic acid
synthase) (Lipoate synthase) (Lipoyl-acyl-carrier
protein synthase) (Sulfur insertion protein lipA)
(Lip-syn)
Length = 333
Score = 34.7 bits (78), Expect = 1.3
Identities = 36/108 (33%), Positives = 56/108 (51%), Gaps = 17/108 (15%)
Query: 678 RGYSPNLYTYSSFIDCLFKD--NRLDLVLKVLSKMLENSCTPNVVIYT-EMVDGLCKIGK 734
R YSP+ + I+ L D RLD L +L NS P+V+ + E V L K +
Sbjct: 169 REYSPD-----TRIEVLVPDFRGRLDRALHIL-----NSGPPDVMNHNLETVPRLYKQAR 218
Query: 735 --TDEAYKLMLKMEEKGCNPNVVTYTAMIDGFGKSGKIEQCLELFRDM 780
+D A+ L L +E K +P V T + ++ G G++ E+ L++ RDM
Sbjct: 219 PGSDYAHSLKLLVEFKKLHPEVPTKSGLMLGLGETD--EEILQVMRDM 264
>CI84_NEUCR (O42637) Complex I intermediate-associated protein 84,
mitochondrial precursor
Length = 748
Score = 34.7 bits (78), Expect = 1.3
Identities = 65/337 (19%), Positives = 125/337 (36%), Gaps = 49/337 (14%)
Query: 527 NVVTYTALIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDGHCKAGQIEKACQIY 586
+ T L+ A + +A+ +++ K NV TY + A IE A QI+
Sbjct: 355 DATTINRLMQAAQEKGNPYMAERFWQLAQDFNIKANVHTYLNQMSYRLDANDIEGAHQIF 414
Query: 587 ARMRG-------DIESSDMDKYFKLDHNNCEGPNVITYGALVDGLCKANRVKEAH----- 634
+++ D + M+KY ++ E PN+ + L + + V E
Sbjct: 415 SKLASGAVEVEFDEDLPVMNKYLRVLCAQQE-PNIQHILTITSALEQRHAVLEPETIVAL 473
Query: 635 -----------ELLDTMLAHGCEPNQI----VYDAVIDGFCKIGKLQD-AQEVFTKMSER 678
+++DT+ H + I +Y A +D C D A + ++ + +
Sbjct: 474 CLVFLNHDKKFDVIDTLSLHSVSISHIERQQIYKAFVDYICSPQTTTDRAWDAYSLLRQY 533
Query: 679 GYSPNLYTYSSFIDCLFKDNRLDLVLKVLSKML---ENSCTPNVVIYTEMVDGL--CKIG 733
++ ++ F+ + D+ V M +++ P IY ++GL C I
Sbjct: 534 FPETSVDDRVRLMESFFERKKPDMACLVFGHMRAHDDDNMHPTADIYVRCLEGLGRCPIP 593
Query: 734 K---TDEAYKL-----MLKMEEKGCNPNVVTYTAMIDGFGKSGKIEQCLELFRDMCSKGC 785
+ +D A L MLKM+ + N Y A++ + G L+ + + ++
Sbjct: 594 EQRPSDPASSLKMVHNMLKMDTR-VEMNTRLYNALMLAYAAGGDPFTALDFWEEHITRSA 652
Query: 786 APNFITYRVLINHCCSNGLLDEAYKLLDEMKQTYWPK 822
++ CC E L D + W K
Sbjct: 653 EGPSYNSLAIVFWCC------ELIPLGDRYARPVWQK 683
Score = 33.1 bits (74), Expect = 3.8
Identities = 17/83 (20%), Positives = 40/83 (47%), Gaps = 5/83 (6%)
Query: 464 VIGFLCDASKVEKAFSLFEEMKRNG---IVPSVYTYTILIDSFCKAGLIQQARKWFDEML 520
V+ L + + E+ +EE + G +P V+ I + + + I++ ++W+ + +
Sbjct: 212 VLEGLANEGREEELLQFWEEAQETGGIKYIPGVHQ--IFVTYYARQDKIEETKQWYSKPI 269
Query: 521 HKGCTPNVVTYTALIHAYLKAKQ 543
H G +P T L+ + ++ Q
Sbjct: 270 HSGFSPTGETLLELVRSSRRSSQ 292
>YD45_METJA (Q58741) Hypothetical protein MJ1345
Length = 314
Score = 34.3 bits (77), Expect = 1.7
Identities = 33/119 (27%), Positives = 61/119 (50%), Gaps = 10/119 (8%)
Query: 662 IGKLQDAQEVFTKMS--ERGYSPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLENSCTPNV 719
+GKL++A+EVF K+ E+ P Y ++FI L K D LK++ K+L+ +
Sbjct: 92 LGKLEEAKEVFLKLCRLEKSDLPVKYV-TAFI--LKKLGEYDYALKIIDKILK-KYPKSA 147
Query: 720 VIYTEMVDGLCKIGKTD---EAYKLMLKMEEKGCNPNVVTYTAMIDGFGKSGKIEQCLE 775
+ + E + L + GK E + LK+ K C +++ ++ G+ G+ +CL+
Sbjct: 148 IAWAEKGEILYREGKLKKSLECFDNALKINPKDCQ-SLLYKGEILFKLGRYGEALKCLK 205
>LIPA_CHRVO (Q7NTF9) Lipoyl synthase (EC 2.8.1.-) (Lipoic acid
synthase) (Lipoate synthase) (Lipoyl-acyl-carrier
protein synthase) (Sulfur insertion protein lipA)
(Lip-syn)
Length = 315
Score = 34.3 bits (77), Expect = 1.7
Identities = 26/84 (30%), Positives = 44/84 (51%), Gaps = 8/84 (9%)
Query: 699 RLDLVLKVLSKMLENSCTPNVVIYTEMVDGLCKIGK--TDEAYKLMLKMEEKGCNPNVVT 756
RLD+ + +L++ + N+ E V L K + D A+ L L + K NPNV T
Sbjct: 170 RLDIAVDILTQTPPDVMNHNL----ETVPRLYKQARPGADYAHSLQLLKDYKAKNPNVRT 225
Query: 757 YTAMIDGFGKSGKIEQCLELFRDM 780
+ ++ G G++ E+ LE+ RD+
Sbjct: 226 KSGLMVGLGETD--EEILEVMRDL 247
>LIPA_BORPE (Q7W0K8) Lipoyl synthase (EC 2.8.1.-) (Lipoic acid
synthase) (Lipoate synthase) (Lipoyl-acyl-carrier
protein synthase) (Sulfur insertion protein lipA)
(Lip-syn)
Length = 333
Score = 33.9 bits (76), Expect = 2.2
Identities = 36/108 (33%), Positives = 55/108 (50%), Gaps = 17/108 (15%)
Query: 678 RGYSPNLYTYSSFIDCLFKD--NRLDLVLKVLSKMLENSCTPNVVIYT-EMVDGLCKIGK 734
R YSP+ + I+ L D RLD L +L NS P+V+ + E V L K +
Sbjct: 169 REYSPD-----TRIEVLVPDFRGRLDRALHIL-----NSGPPDVMNHNLETVPRLYKQAR 218
Query: 735 --TDEAYKLMLKMEEKGCNPNVVTYTAMIDGFGKSGKIEQCLELFRDM 780
+D A+ L L E K +P V T + ++ G G++ E+ L++ RDM
Sbjct: 219 PGSDYAHSLKLLAEFKKLHPEVPTKSGLMLGLGETD--EEILQVMRDM 264
>LIPA_BORBR (Q7WR00) Lipoyl synthase (EC 2.8.1.-) (Lipoic acid
synthase) (Lipoate synthase) (Lipoyl-acyl-carrier
protein synthase) (Sulfur insertion protein lipA)
(Lip-syn)
Length = 333
Score = 33.9 bits (76), Expect = 2.2
Identities = 36/108 (33%), Positives = 55/108 (50%), Gaps = 17/108 (15%)
Query: 678 RGYSPNLYTYSSFIDCLFKD--NRLDLVLKVLSKMLENSCTPNVVIYT-EMVDGLCKIGK 734
R YSP+ + I+ L D RLD L +L NS P+V+ + E V L K +
Sbjct: 169 REYSPD-----TRIEVLVPDFRGRLDRALHIL-----NSGPPDVMNHNLETVPRLYKQAR 218
Query: 735 --TDEAYKLMLKMEEKGCNPNVVTYTAMIDGFGKSGKIEQCLELFRDM 780
+D A+ L L E K +P V T + ++ G G++ E+ L++ RDM
Sbjct: 219 PGSDYAHSLKLLAEFKKLHPEVPTKSGLMLGLGETD--EEILQVMRDM 264
>RFC2_DROME (P53034) Activator 1 40 kDa subunit (Replication factor
C 40 kDa subunit) (A1 40 kDa subunit) (RF-C 40 kDa
subunit) (RFC40)
Length = 331
Score = 33.1 bits (74), Expect = 3.8
Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 345 PNREIFNSLIHAYCKSRDYSYAYKLFKKMIKCGCQPGYLVYNIF 388
P+ ++ +IH +C + D AYK+ K+ K G P ++ NIF
Sbjct: 238 PHPKLLEEMIH-HCAANDIHKAYKILAKLWKLGYSPEDIIANIF 280
>GAC1_CLOAB (P58251) Glutamyl-tRNA(Gln) amidotransferase subunit C 1
(EC 6.3.5.-) (Glu-ADT subunit C 1)
Length = 95
Score = 32.7 bits (73), Expect = 4.9
Identities = 17/59 (28%), Positives = 35/59 (58%), Gaps = 1/59 (1%)
Query: 832 EGFSQEFITSIGLLDELSENESVPVDSLYR-ILIDNYIKAGRLEVALDLLEEISSSPSH 889
EGF ++ + +G +D+LSE ++ VD + I+N + +E ++DL + I ++P +
Sbjct: 25 EGFMEDLNSILGYVDKLSELDTDNVDIIVNPYYIENKFREDEVEESMDLKDVIKNAPKN 83
>EFTS_WOLSU (Q7MAK1) Elongation factor Ts (EF-Ts)
Length = 355
Score = 32.7 bits (73), Expect = 4.9
Identities = 37/163 (22%), Positives = 69/163 (41%), Gaps = 22/163 (13%)
Query: 683 NLYTYSSFIDCLFKDNRL-DLVLKVLSKMLENSCTPNVVIYTEMVDGL----------CK 731
+L +S D + K+ + +LV K + +++ + ++T VDG+ K
Sbjct: 74 SLLEINSETDFVAKNEQFKELVAKTSKLVHDHALSSTETLHTVSVDGMEFSEYLQQNIAK 133
Query: 732 IGKTDEAYKLMLKMEEKGCNPNVVTYTAMIDG------FGKSGKIEQCLELFRDMCSKGC 785
IG+ +++ ++G N ++ G FGK G C+EL R++C
Sbjct: 134 IGENIVVRRIVTLETKRGAIVNGYVHSNGRVGVLIGIKFGKEGSKSACVELARNLCMHAA 193
Query: 786 A--PNFITYRVLINHCCSN---GLLDEAYKLLDEMKQTYWPKH 823
A P ++Y L + L+ E K +E+K+ P H
Sbjct: 194 AMKPQVLSYEELDPEFITKEKVALIAELEKENEELKRLGKPLH 236
>EF3_CANGA (O93796) Elongation factor 3 (EF-3)
Length = 1045
Score = 32.3 bits (72), Expect = 6.4
Identities = 30/109 (27%), Positives = 48/109 (43%), Gaps = 9/109 (8%)
Query: 857 DSLYRILIDNYIKAGRLEVALDLLEEISSSPSHAVSNKYLYASLIENLSHASKVDKALEL 916
+ L + + D A LE + E + SPS ++ + E + A DK ++
Sbjct: 52 EELAKAVKDKKTSANFLEAVAHIANEANLSPS---VEPFVITLVPEICAKAGDKDKDVQA 108
Query: 917 YASM----ISKNVVPEL--SILVHLIKGLIKVDKWQEALQLSDSICQMV 959
AS ISK + P + L HL K L +KWQE + + +I +V
Sbjct: 109 VASKTLVAISKAINPVAIKAYLPHLTKSLETTNKWQEKVSVLAAISALV 157
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.322 0.138 0.412
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 114,665,485
Number of Sequences: 164201
Number of extensions: 4976164
Number of successful extensions: 11551
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 11468
Number of HSP's gapped (non-prelim): 70
length of query: 987
length of database: 59,974,054
effective HSP length: 120
effective length of query: 867
effective length of database: 40,269,934
effective search space: 34914032778
effective search space used: 34914032778
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 71 (32.0 bits)
Medicago: description of AC126792.3