BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC126783.5 + phase: 0
(612 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
VAC8_YEAST (P39968) Vacuolar protein 8 49 3e-05
IMA2_ARATH (O04294) Importin alpha-2 subunit (Karyopherin alpha-... 48 9e-05
IMA1_YEAST (Q02821) Importin alpha subunit (Karyopherin alpha su... 37 0.15
PLAK_XENLA (P30998) Junction plakoglobin (Desmoplakin III) 37 0.20
IMA1_ARATH (Q96321) Importin alpha-1 subunit (Karyopherin alpha-... 36 0.26
CTNB_TRIGR (P35223) Beta-catenin 36 0.26
IMA_DROME (P52295) Importin alpha subunit (Karyopherin alpha sub... 35 0.58
PLAK_MOUSE (Q02257) Junction plakoglobin (Desmoplakin III) (Frag... 35 0.75
PLAK_HUMAN (P14923) Junction plakoglobin (Desmoplakin III) 35 0.75
PLAK_BOVIN (Q8SPJ1) Junction plakoglobin (Desmoplakin III) 35 0.75
CC7_SCHPO (P41892) Cell division control protein 7 (EC 2.7.1.-) 34 0.98
IMA_LYCES (O22478) Importin alpha subunit (Karyopherin alpha sub... 34 1.3
IMA5_HUMAN (O15131) Importin alpha-6 subunit (Karyopherin alpha-... 34 1.3
CTNB_RAT (Q9WU82) Beta-catenin 34 1.3
CTNB_MOUSE (Q02248) Beta-catenin 34 1.3
SCP1_MESAU (Q60563) Synaptonemal complex protein 1 (SCP-1 protei... 33 1.7
CTNB_HUMAN (P35222) Beta-catenin (PRO2286) 33 2.2
IMA3_HUMAN (O00505) Importin alpha-3 subunit (Karyopherin alpha-... 33 2.9
K1CQ_MOUSE (Q9QWL7) Keratin, type I cytoskeletal 17 (Cytokeratin... 32 3.7
IMA3_CAEEL (Q19969) Importin alpha-3 subunit (Karyopherin alpha-... 32 3.7
>VAC8_YEAST (P39968) Vacuolar protein 8
Length = 578
Score = 49.3 bits (116), Expect = 3e-05
Identities = 94/420 (22%), Positives = 169/420 (39%), Gaps = 48/420 (11%)
Query: 174 KIEATNELASLAQDNDRNKKIIVEEGGVPPLLKLLKEASSPAAQIAAATCLCYLANDLER 233
++ A L +LA +N+ NK +IVE GG+ PL+ + + Q A C+ LA +
Sbjct: 102 QVAACAALGNLAVNNE-NKLLIVEMGGLEPLINQMM-GDNVEVQCNAVGCITNLATRDDN 159
Query: 234 IRVIVNEVGVPAVVQVLADSPIRVQTLAANLVARMAKHDPVAQEDFARENAIRPLVTLLS 293
I + + ++ IRVQ A + M H +++ A+ LV+LLS
Sbjct: 160 KHKIATSGALIPLTKLAKSKHIRVQRNATGALLNMT-HSEENRKELVNAGAVPVLVSLLS 218
Query: 294 --------------FDTAVDEQTSIHSIFQVNKELGKKTTDRSGTGS------GSRQFAN 333
+ AVDE + + Q L K + S + N
Sbjct: 219 STDPDVQYYCTTALSNIAVDE-ANRKKLAQTEPRLVSKLVSLMDSPSSRVKCQATLALRN 277
Query: 334 SYSSTYYYTEGSSRGGNYRKERENEDPAVKLQL-KISCAEALWMLAAGSVSNSRKITETK 392
S T Y E GG + + ++ L L ++C + + N I +
Sbjct: 278 LASDTSYQLEIVRAGGLPHLVKLIQSDSIPLVLASVACIRNISI----HPLNEGLIVDAG 333
Query: 393 GMLCLAKIVE-KEQGELQRNCLMTIMEITAAAESNADLRRGAFKTNSPPAKAVVEQLLRI 451
+ L ++++ K+ E+Q + + T+ + A++E N R+ F++ + + E L
Sbjct: 334 FLKPLVRLLDYKDSEEIQCHAVSTLRNLAASSEKN---RKEFFESGA--VEKCKELALDS 388
Query: 452 LKEVDSPLMQIPAIKSIGSLARTFPARETRVIEPLVAQLSNRDINVADEAAVALTKFASP 511
V S + AI ++ +++ E +++ L+ +++ V+ AA AL S
Sbjct: 389 PVSVQSEISACFAILALADVSK-LDLLEANILDALIPMTFSQNQEVSGNAAAALANLCS- 446
Query: 512 DNFLYVEHSKKIIEFDAVP------AVMKLLRSNEVNQMHHAL-TLLCYLALHAGSSESL 564
V + KIIE P +++ L+S+ H AL T+L L H E L
Sbjct: 447 ----RVNNYTKIIEAWDRPNEGIRGFLIRFLKSDYATFEHIALWTILQLLESHNDKVEDL 502
>IMA2_ARATH (O04294) Importin alpha-2 subunit (Karyopherin alpha-2
subunit) (KAP alpha)
Length = 531
Score = 47.8 bits (112), Expect = 9e-05
Identities = 38/140 (27%), Positives = 67/140 (47%), Gaps = 6/140 (4%)
Query: 161 SFIASIQMGQLNDKIEATN---ELASLAQDNDRNKKIIVEEGGVPPLLKLLKEASSPAAQ 217
+ +A I N ++EATN +L S+ Q+ N+ +V+ G VP ++K L P Q
Sbjct: 79 AMVAGIWSEDSNSQLEATNLLRKLLSIEQNPPINE--VVQSGVVPRVVKFLSRDDFPKLQ 136
Query: 218 IAAATCLCYLANDL-ERIRVIVNEVGVPAVVQVLADSPIRVQTLAANLVARMAKHDPVAQ 276
AA L +A+ E VI+ VP +Q+L+ + V+ A + +A P +
Sbjct: 137 FEAAWALTNIASGTSENTNVIIESGAVPIFIQLLSSASEDVREQAVWALGNVAGDSPKCR 196
Query: 277 EDFARENAIRPLVTLLSFDT 296
+ A+ PL++ + +T
Sbjct: 197 DLVLSYGAMTPLLSQFNENT 216
>IMA1_YEAST (Q02821) Importin alpha subunit (Karyopherin alpha
subunit) (Serine-rich RNA polymerase I suppressor
protein)
Length = 542
Score = 37.0 bits (84), Expect = 0.15
Identities = 23/101 (22%), Positives = 51/101 (49%), Gaps = 1/101 (0%)
Query: 194 IIVEEGGVPPLLKLLKEASSPAAQIAAATCLCYLANDLE-RIRVIVNEVGVPAVVQVLAD 252
++++ G VP L++ ++E Q+ AA L +A+ + +V+V+ VP +Q+L
Sbjct: 125 VVIQAGVVPRLVEFMRENQPEMLQLEAAWALTNIASGTSAQTKVVVDADAVPLFIQLLYT 184
Query: 253 SPIRVQTLAANLVARMAKHDPVAQEDFARENAIRPLVTLLS 293
+ V+ A + +A ++ + NA+ P++ L +
Sbjct: 185 GSVEVKEQAIWALGNVAGDSTDYRDYVLQCNAMEPILGLFN 225
>PLAK_XENLA (P30998) Junction plakoglobin (Desmoplakin III)
Length = 738
Score = 36.6 bits (83), Expect = 0.20
Identities = 32/108 (29%), Positives = 50/108 (45%), Gaps = 10/108 (9%)
Query: 177 ATNELASLAQDNDRNKKIIVEEGGVPPLLKLLKEASSPAAQIAAATC-LCYLANDLERIR 235
AT L++L +N RNK ++ + GV L+ + AS A C + +L + +
Sbjct: 407 ATGTLSNLTCNNGRNKTLVTQSNGVESLIHTILRASDKDDIAEPAVCAMRHLTSRHQDAE 466
Query: 236 VIVNEV----GVPAVVQVLADS---PIRVQT--LAANLVARMAKHDPV 274
V N V G+PA+V++L P+ T L NL A H P+
Sbjct: 467 VAQNSVRLHYGIPAIVKLLNPPYQWPLVKATIGLIRNLALCPANHAPL 514
>IMA1_ARATH (Q96321) Importin alpha-1 subunit (Karyopherin alpha-1
subunit) (KAP alpha)
Length = 532
Score = 36.2 bits (82), Expect = 0.26
Identities = 44/154 (28%), Positives = 70/154 (44%), Gaps = 20/154 (12%)
Query: 401 VEKEQGELQRNCLMTIMEITAAAESNADLRRGAFKT--NSPPAKAV-VEQLLRILKEV-- 455
V+ E+G +R M + + ES RR + P A A V++ L LK++
Sbjct: 20 VDAEEGRRRREDNMVEIRKSKREESLMKKRREGMQALQGFPSASAASVDKKLDSLKDMVA 79
Query: 456 ----DSPLMQIPA---IKSIGSLARTFPARET---RVIEPLVAQLSNRDINVAD-EAAVA 504
D P +Q+ + + + S+ R+ P E V+ V L D EAA A
Sbjct: 80 GVWSDDPALQLESTTQFRKLLSIERSPPIEEVISAGVVPRFVEFLKKEDYPAIQFEAAWA 139
Query: 505 LTKFASPDNFLYVEHSKKIIEFDAVPAVMKLLRS 538
LT AS + +H+K +I+ +AVP ++LL S
Sbjct: 140 LTNIASGTS----DHTKVVIDHNAVPIFVQLLAS 169
>CTNB_TRIGR (P35223) Beta-catenin
Length = 820
Score = 36.2 bits (82), Expect = 0.26
Identities = 71/308 (23%), Positives = 117/308 (37%), Gaps = 60/308 (19%)
Query: 153 DPILSWVWSFIASIQMGQLNDKIEATNELASLAQDNDRNKKIIVEEGGVPPLLKLLKEAS 212
+P+L + +AS +N A L++L +N RNK I+ + GV L++ L +A
Sbjct: 415 EPLLQMLVQLLAS---NDINVVTCACGILSNLTCNNSRNKMIVSQMAGVEALVQTLMKAG 471
Query: 213 SPAAQIAAATC-LCYLANDLERIRVIVNEV----GVPAVVQVLADSPIRVQTLAANLVAR 267
A C L ++ + + N V G+P +V++L P R + A +
Sbjct: 472 DREEITEPAVCALRHVTSRHPGAEMGQNTVRLNYGIPVIVKLL-HPPSRWPLIKATV--- 527
Query: 268 MAKHDPVAQEDFARENAIRPLVTLLSFDTAVDEQTSIHSIFQVNKELGKKTTDRSGTGSG 327
IR L + + EQ ++H + Q+ + T RS GS
Sbjct: 528 ---------------GLIRNLALCSANHAPLREQGALHRLVQLLMRAHQDTQRRSSMGS- 571
Query: 328 SRQFANSYSSTYYYTEGSSRGGNYRKERENEDPAVKLQLKISCAEALWMLAAGSVSNSRK 387
S+GGNY ED + AL +LA S++R
Sbjct: 572 ----------------TGSQGGNYADGVRMED------IVEGTTGALHILARD--SHNRA 607
Query: 388 ITETKGMLCLAKIVEKEQGELQRNCLMTIMEITAAAESNADL-RRGAFKTNSPPAKAVVE 446
+ + G+ C+ V +L N + I + A S L ++GA A A +
Sbjct: 608 LIQ--GLNCIPLFV-----QLLYNNIENIQRVAAGVLSELSLEKQGAEMIEQEGATAPLT 660
Query: 447 QLLRILKE 454
+LL E
Sbjct: 661 ELLHSRNE 668
>IMA_DROME (P52295) Importin alpha subunit (Karyopherin alpha
subunit) (Pendulin)
Length = 522
Score = 35.0 bits (79), Expect = 0.58
Identities = 39/200 (19%), Positives = 79/200 (39%), Gaps = 16/200 (8%)
Query: 121 VGDMKWLLSILDVDGSGGGGGINLSLPPIASNDPILSWVWSFIASIQMGQLNDKIEATNE 180
+ D W LS + D N + + +D + + +QM + + + A
Sbjct: 257 LADACWALSYVTDDD-------NTKIQAVVDSDAVPR----LVKLLQMDEPSIIVPALRS 305
Query: 181 LASLAQDNDRNKKIIVEEGGVPPLLKLLKEASSPAAQIAAATCLCYLANDLERIRVIVNE 240
+ ++ D+ +++ GG+P L LL+ S + AA T A + ++I+ ++
Sbjct: 306 VGNIVTGTDQQTDVVIASGGLPRLGLLLQHNKSNIVKEAAWTVSNITAGNQKQIQAVIQA 365
Query: 241 VGVPAVVQVLADSPIRVQTLAANLVARMAKHDPVAQ--EDFARENAIRPLVTLLSFD--- 295
+ VL + Q AA V Q + + ++P + LL
Sbjct: 366 GIFQQLRTVLEKGDFKAQKEAAWAVTNTTTSGTPEQIVDLIEKYKILKPFIDLLDTKDPR 425
Query: 296 TAVDEQTSIHSIFQVNKELG 315
T QT + ++F + ++LG
Sbjct: 426 TIKVVQTGLSNLFALAEKLG 445
Score = 33.1 bits (74), Expect = 2.2
Identities = 35/134 (26%), Positives = 70/134 (52%), Gaps = 12/134 (8%)
Query: 476 PARETRVIEPLVAQLS-NRDINVADEAAVALTKFASPDNFLYVEHSKKIIEFDAVPAVMK 534
P + + + P+++QL ++DI V +A AL+ DN + +++ DAVP ++K
Sbjct: 234 PFDQVKRLLPVLSQLLLSQDIQVLADACWALSYVTDDDN----TKIQAVVDSDAVPRLVK 289
Query: 535 LLRSNEVNQMHHALTLLCYLALHAGSSESLEQARVLLALEGADRT-ILPQHIR-DLVSKA 592
LL+ +E + + AL + + + + +Q V++A G R +L QH + ++V +A
Sbjct: 290 LLQMDEPSIIVPALRSVGNIV-----TGTDQQTDVVIASGGLPRLGLLLQHNKSNIVKEA 344
Query: 593 IGHLNLYHAGSHSQ 606
++ AG+ Q
Sbjct: 345 AWTVSNITAGNQKQ 358
>PLAK_MOUSE (Q02257) Junction plakoglobin (Desmoplakin III)
(Fragment)
Length = 621
Score = 34.7 bits (78), Expect = 0.75
Identities = 36/138 (26%), Positives = 58/138 (41%), Gaps = 16/138 (11%)
Query: 177 ATNELASLAQDNDRNKKIIVEEGGVPPLLKLLKEASSPAAQIAAATC-LCYLANDLERIR 235
AT L++L +N +NK ++ + GV L+ + A A C L +L +
Sbjct: 287 ATGTLSNLTCNNSKNKTLVTQNSGVEALIHAILRAGDKDDITEPAVCALRHLTSRHPEAE 346
Query: 236 VIVNEV----GVPAVVQVLADS---PIRVQT--LAANLVARMAKHDPVAQEDFARENAIR 286
+ N V G+PA+V++L P+ T L NL A H P+ +E A+
Sbjct: 347 MAQNSVRLNYGIPAIVKLLNQPNQWPLVKATIGLIRNLALCPANHAPL------QEAAVI 400
Query: 287 PLVTLLSFDTAVDEQTSI 304
P + L D Q +
Sbjct: 401 PRLVQLLVKAHQDAQRHV 418
>PLAK_HUMAN (P14923) Junction plakoglobin (Desmoplakin III)
Length = 743
Score = 34.7 bits (78), Expect = 0.75
Identities = 36/138 (26%), Positives = 58/138 (41%), Gaps = 16/138 (11%)
Query: 177 ATNELASLAQDNDRNKKIIVEEGGVPPLLKLLKEASSPAAQIAAATC-LCYLANDLERIR 235
AT L++L +N +NK ++ + GV L+ + A A C L +L +
Sbjct: 409 ATGTLSNLTCNNSKNKTLVTQNSGVEALIHAILRAGDKDDITEPAVCALRHLTSRHPEAE 468
Query: 236 VIVNEV----GVPAVVQVLADS---PIRVQT--LAANLVARMAKHDPVAQEDFARENAIR 286
+ N V G+PA+V++L P+ T L NL A H P+ +E A+
Sbjct: 469 MAQNSVRLNYGIPAIVKLLNQPNQWPLVKATIGLIRNLALCPANHAPL------QEAAVI 522
Query: 287 PLVTLLSFDTAVDEQTSI 304
P + L D Q +
Sbjct: 523 PRLVQLLVKAHQDAQRHV 540
>PLAK_BOVIN (Q8SPJ1) Junction plakoglobin (Desmoplakin III)
Length = 745
Score = 34.7 bits (78), Expect = 0.75
Identities = 36/138 (26%), Positives = 58/138 (41%), Gaps = 16/138 (11%)
Query: 177 ATNELASLAQDNDRNKKIIVEEGGVPPLLKLLKEASSPAAQIAAATC-LCYLANDLERIR 235
AT L++L +N +NK ++ + GV L+ + A A C L +L +
Sbjct: 411 ATGTLSNLTCNNSKNKTLVTQNSGVEALIHAILRAGDKDDITEPAVCALRHLTSRHPEAE 470
Query: 236 VIVNEV----GVPAVVQVLADS---PIRVQT--LAANLVARMAKHDPVAQEDFARENAIR 286
+ N V G+PA+V++L P+ T L NL A H P+ +E A+
Sbjct: 471 MAQNSVRLNYGIPAIVKLLNQPNQWPLVKATIGLIRNLALCPANHAPL------QEAAVI 524
Query: 287 PLVTLLSFDTAVDEQTSI 304
P + L D Q +
Sbjct: 525 PRLVQLLVKAHQDAQRHV 542
>CC7_SCHPO (P41892) Cell division control protein 7 (EC 2.7.1.-)
Length = 1062
Score = 34.3 bits (77), Expect = 0.98
Identities = 26/143 (18%), Positives = 66/143 (45%), Gaps = 2/143 (1%)
Query: 155 ILSWVWSFIASIQMGQLNDKIEATNELASLAQDNDRNKKIIVEEGGVPPLLKLLKEASSP 214
+ S + S + S++ + K +++AS+ ++ K+ I++ G+ PLL+ L+E +P
Sbjct: 518 LASLLSSLLGSLRDKNIGSKDTTVSQIASILSEDLSLKREIIQAHGILPLLETLREIKTP 577
Query: 215 AAQIAAATCLCYLA-NDLERIRVIVNEVGVPAVVQVL-ADSPIRVQTLAANLVARMAKHD 272
Q+ + +A +D ++ + G+P ++ + + +A + +M +
Sbjct: 578 DVQLLLLKLINTVAFDDHTTLQKVCFAGGLPLMLSFSNREHSFEFRYESAIFIQQMYRTS 637
Query: 273 PVAQEDFARENAIRPLVTLLSFD 295
+ + F N + L+ + D
Sbjct: 638 ALTLQMFLSSNGLNSLLLFIKED 660
>IMA_LYCES (O22478) Importin alpha subunit (Karyopherin alpha
subunit) (KAP alpha)
Length = 527
Score = 33.9 bits (76), Expect = 1.3
Identities = 27/90 (30%), Positives = 44/90 (48%), Gaps = 5/90 (5%)
Query: 162 FIASIQMGQLNDKIEATNELASLAQDNDRNKKIIVEEGGVPPLLKLLKEASSPAAQIAAA 221
F+A QL + EA L ++A N K++++ G VP ++LL S + A
Sbjct: 124 FLARDDYPQL--QFEAAWALTNIASGTSENTKVVIDYGSVPIFIRLLSSPSDDVRE-QAV 180
Query: 222 TCLCYLANDLERIRVIVNEVGVPAVVQVLA 251
L +A D + R +V +G A+V +LA
Sbjct: 181 WALGNIAGDSPKYRDLV--LGHGALVALLA 208
>IMA5_HUMAN (O15131) Importin alpha-6 subunit (Karyopherin alpha-5
subunit)
Length = 536
Score = 33.9 bits (76), Expect = 1.3
Identities = 38/153 (24%), Positives = 66/153 (42%), Gaps = 20/153 (13%)
Query: 405 QGELQRNCLMTIMEITAAAESNADLRRGAFKTNSPPAKAVVEQLLRIL-KEVDSPLMQIP 463
+ +Q + + + + I D+ + F N+ ++ ++L KE + P+ Q+
Sbjct: 61 ESPIQDSDISSTVPIPEEGVVTTDMVQMIFSNNADQQLTATQKFRKLLSKEPNPPIDQV- 119
Query: 464 AIKSIGSLARTFPARETRVIEPLVAQLS-NRDINVADEAAVALTKFASPDNFLYVEHSKK 522
++ V++ V L N + + EAA ALT AS FL H+K
Sbjct: 120 -------------IQKPGVVQRFVKFLERNENCTLQFEAAWALTNIAS-GTFL---HTKV 162
Query: 523 IIEFDAVPAVMKLLRSNEVNQMHHALTLLCYLA 555
+IE AVP +KLL S + A+ L +A
Sbjct: 163 VIETGAVPIFIKLLNSEHEDVQEQAVWALGNIA 195
>CTNB_RAT (Q9WU82) Beta-catenin
Length = 781
Score = 33.9 bits (76), Expect = 1.3
Identities = 45/205 (21%), Positives = 84/205 (40%), Gaps = 25/205 (12%)
Query: 162 FIASIQMGQLNDKIEATNELASLAQDNDRNKKIIVEEGGVPPLLKLLKEASSPAAQIAAA 221
F+ ++M ++ + T L LA+D + +I++ PL L + Q AA
Sbjct: 560 FVEGVRMEEIVEG--CTGALHILARDV--HNRIVIRGLNTIPLFVQLLYSPIENIQRVAA 615
Query: 222 TCLCYLANDLERIRVIVNEVGVPAVVQVLADSPIRVQTLAANLVARMAKHDPVAQEDFAR 281
LC LA D E I E + ++L V T AA ++ RM++ P +D+ +
Sbjct: 616 GVLCELAQDKEAAEAIEAEGATAPLTELLHSRNEGVATYAAAVLFRMSEDKP---QDYKK 672
Query: 282 ENAIRPLVTLLSFDTAVDEQTSIHSIFQVNKELGKKTTDRSGTGSGSRQFANSYSSTYYY 341
++ +L + +T+ + ++G + G G RQ SY S +
Sbjct: 673 RLSVELTSSLFRTEPMAWNETA-----DLGLDIGAQ-----GEALGYRQDDPSYRSFH-- 720
Query: 342 TEGSSRGGNYRKERENEDPAVKLQL 366
G Y ++ DP ++ ++
Sbjct: 721 ------SGGYGQDALGMDPMMEHEM 739
Score = 31.6 bits (70), Expect = 6.4
Identities = 35/126 (27%), Positives = 58/126 (45%), Gaps = 15/126 (11%)
Query: 177 ATNELASLAQDNDRNKKIIVEEGGVPPLLKLLKEASSPAAQIAAATC-LCYLANDLERIR 235
A L++L +N +NK ++ + GG+ L++ + A A C L +L + +
Sbjct: 420 AAGILSNLTCNNYKNKMMVCQVGGIEALVRTVLRAGDREDITEPAICALRHLTSRHQEAE 479
Query: 236 VIVNEV----GVPAVVQVL---ADSPIRVQT--LAANLVARMAKHDPVAQEDFARENAIR 286
+ N V G+P VV++L + P+ T L NL A H P+ + + AI
Sbjct: 480 MAQNAVRLHYGLPVVVKLLHPPSHWPLIKATVGLIRNLALCPANHAPLRE-----QGAIP 534
Query: 287 PLVTLL 292
LV LL
Sbjct: 535 RLVQLL 540
>CTNB_MOUSE (Q02248) Beta-catenin
Length = 781
Score = 33.9 bits (76), Expect = 1.3
Identities = 45/205 (21%), Positives = 84/205 (40%), Gaps = 25/205 (12%)
Query: 162 FIASIQMGQLNDKIEATNELASLAQDNDRNKKIIVEEGGVPPLLKLLKEASSPAAQIAAA 221
F+ ++M ++ + T L LA+D + +I++ PL L + Q AA
Sbjct: 560 FVEGVRMEEIVEG--CTGALHILARDV--HNRIVIRGLNTIPLFVQLLYSPIENIQRVAA 615
Query: 222 TCLCYLANDLERIRVIVNEVGVPAVVQVLADSPIRVQTLAANLVARMAKHDPVAQEDFAR 281
LC LA D E I E + ++L V T AA ++ RM++ P +D+ +
Sbjct: 616 GVLCELAQDKEAAEAIEAEGATAPLTELLHSRNEGVATYAAAVLFRMSEDKP---QDYKK 672
Query: 282 ENAIRPLVTLLSFDTAVDEQTSIHSIFQVNKELGKKTTDRSGTGSGSRQFANSYSSTYYY 341
++ +L + +T+ + ++G + G G RQ SY S +
Sbjct: 673 RLSVELTSSLFRTEPMAWNETA-----DLGLDIGAQ-----GEALGYRQDDPSYRSFH-- 720
Query: 342 TEGSSRGGNYRKERENEDPAVKLQL 366
G Y ++ DP ++ ++
Sbjct: 721 ------SGGYGQDALGMDPMMEHEM 739
Score = 31.6 bits (70), Expect = 6.4
Identities = 35/126 (27%), Positives = 58/126 (45%), Gaps = 15/126 (11%)
Query: 177 ATNELASLAQDNDRNKKIIVEEGGVPPLLKLLKEASSPAAQIAAATC-LCYLANDLERIR 235
A L++L +N +NK ++ + GG+ L++ + A A C L +L + +
Sbjct: 420 AAGILSNLTCNNYKNKMMVCQVGGIEALVRTVLRAGDREDITEPAICALRHLTSRHQEAE 479
Query: 236 VIVNEV----GVPAVVQVL---ADSPIRVQT--LAANLVARMAKHDPVAQEDFARENAIR 286
+ N V G+P VV++L + P+ T L NL A H P+ + + AI
Sbjct: 480 MAQNAVRLHYGLPVVVKLLHPPSHWPLIKATVGLIRNLALCPANHAPLRE-----QGAIP 534
Query: 287 PLVTLL 292
LV LL
Sbjct: 535 RLVQLL 540
>SCP1_MESAU (Q60563) Synaptonemal complex protein 1 (SCP-1 protein)
(Meiotic chromosome synaptic protein) (Fragment)
Length = 845
Score = 33.5 bits (75), Expect = 1.7
Identities = 81/375 (21%), Positives = 140/375 (36%), Gaps = 62/375 (16%)
Query: 184 LAQDNDRNKKIIVEEGGVPPLLKLLKEASSPAAQIAAATCLCYLANDLERIRVIVNEVGV 243
L ++ NK +I E L LLKE S+ +A+ + E R + ++
Sbjct: 15 LEEEIQENKDLIKENNATRHLCNLLKETSARSAEKTNK-----YEYEREETRQVYVDLNN 69
Query: 244 PAVVQVLADSPIRVQTLAANLVARM---AKHDPV--AQEDFARENAIRPLVTLLSFDTAV 298
+LA +RVQ A L H+ + QE++ +E
Sbjct: 70 NIEKMILAFEELRVQAENARLDMHFKLKEDHEKIQHLQEEYKKE--------------VN 115
Query: 299 DEQTSIHSIFQVNKELGKKTTDRSGTGSGSRQFANSYSSTYYYTEGSSRGGNYRKER--- 355
D++ + + E K D + SR N + + + N +K+
Sbjct: 116 DKENQVSLLLIQRTEKENKMKDLTFLLEESRDKVNQLEDKTKLQDENVKELNKKKDHLTS 175
Query: 356 ENEDPAVKLQLKISCAEAL---WMLAAGSV-------------------SNSRKITETKG 393
E ED + LQ ++ +AL +A ++ +S +TE K
Sbjct: 176 ELEDTKMSLQRSMNTQKALEEDLQIATKTIYQLTEEKEAQMEEFNKAKTDHSFMVTELKA 235
Query: 394 MLC-LAKIVEKEQGELQRN-CLMTIMEITAAAESNADLRRGAFKTNSPPAKAVVEQLLRI 451
C L +++ EQ L +N + I+ + +SN FK N+ + +E+L +I
Sbjct: 236 TTCTLEELLRTEQQRLVKNEDQLKILTMELQKKSNELDEMTKFKNNN---EVKLEELKKI 292
Query: 452 LKEVDSPLMQIPAIKSIGSLARTFPARETRVIEPLVAQLSNRDINVAD-EAAVALTKFAS 510
L E D L+ K + LA +E + L L R+ V D E + +TK +
Sbjct: 293 LAE-DQKLLD--EKKQVEKLAEELQGKE----QELTLLLQTREKEVHDLEEQLLVTKISD 345
Query: 511 PDNFLYVEHSKKIIE 525
+ VE K +E
Sbjct: 346 QNYSKQVEELKTKLE 360
>CTNB_HUMAN (P35222) Beta-catenin (PRO2286)
Length = 781
Score = 33.1 bits (74), Expect = 2.2
Identities = 45/205 (21%), Positives = 84/205 (40%), Gaps = 25/205 (12%)
Query: 162 FIASIQMGQLNDKIEATNELASLAQDNDRNKKIIVEEGGVPPLLKLLKEASSPAAQIAAA 221
F+ ++M ++ + T L LA+D + +I++ PL L + Q AA
Sbjct: 560 FVEGVRMEEIVEG--CTGALHILARDV--HNRIVIRGLNTIPLFVQLLYSPIENIQRVAA 615
Query: 222 TCLCYLANDLERIRVIVNEVGVPAVVQVLADSPIRVQTLAANLVARMAKHDPVAQEDFAR 281
LC LA D E I E + ++L V T AA ++ RM++ P +D+ +
Sbjct: 616 GVLCELAQDKEAAEAIEAEGATAPLTELLHSRNEGVATYAAAVLFRMSEDKP---QDYKK 672
Query: 282 ENAIRPLVTLLSFDTAVDEQTSIHSIFQVNKELGKKTTDRSGTGSGSRQFANSYSSTYYY 341
++ +L + +T+ + ++G + G G RQ SY S +
Sbjct: 673 RLSVELTSSLFRTEPMAWNETA-----DLGLDIGAQ-----GEPLGYRQDDPSYRSFH-- 720
Query: 342 TEGSSRGGNYRKERENEDPAVKLQL 366
G Y ++ DP ++ ++
Sbjct: 721 ------SGGYGQDALGMDPMMEHEM 739
Score = 31.6 bits (70), Expect = 6.4
Identities = 35/126 (27%), Positives = 58/126 (45%), Gaps = 15/126 (11%)
Query: 177 ATNELASLAQDNDRNKKIIVEEGGVPPLLKLLKEASSPAAQIAAATC-LCYLANDLERIR 235
A L++L +N +NK ++ + GG+ L++ + A A C L +L + +
Sbjct: 420 AAGILSNLTCNNYKNKMMVCQVGGIEALVRTVLRAGDREDITEPAICALRHLTSRHQEAE 479
Query: 236 VIVNEV----GVPAVVQVL---ADSPIRVQT--LAANLVARMAKHDPVAQEDFARENAIR 286
+ N V G+P VV++L + P+ T L NL A H P+ + + AI
Sbjct: 480 MAQNAVRLHYGLPVVVKLLHPPSHWPLIKATVGLIRNLALCPANHAPLRE-----QGAIP 534
Query: 287 PLVTLL 292
LV LL
Sbjct: 535 RLVQLL 540
>IMA3_HUMAN (O00505) Importin alpha-3 subunit (Karyopherin alpha-3
subunit) (SRP1-gamma)
Length = 521
Score = 32.7 bits (73), Expect = 2.9
Identities = 29/103 (28%), Positives = 53/103 (51%), Gaps = 11/103 (10%)
Query: 456 DSPLMQIPAIKSIGSLARTF--PARETRV---IEPLVAQLSNRDIN--VADEAAVALTKF 508
D+P++Q+ A+++ L + P + + I P++ + RD N + EAA ALT
Sbjct: 83 DNPVVQLSAVQAARKLLSSDRNPPIDDLIKSGILPILVKCLERDDNPSLQFEAAWALTNI 142
Query: 509 ASPDNFLYVEHSKKIIEFDAVPAVMKLLRSNEVNQMHHALTLL 551
AS + ++ +++ +AVP ++LLRS N A+ L
Sbjct: 143 ASGTS----AQTQAVVQSNAVPLFLRLLRSPHQNVCEQAVWAL 181
>K1CQ_MOUSE (Q9QWL7) Keratin, type I cytoskeletal 17 (Cytokeratin
17) (K17) (CK 17)
Length = 432
Score = 32.3 bits (72), Expect = 3.7
Identities = 15/30 (50%), Positives = 19/30 (63%)
Query: 322 SGTGSGSRQFANSYSSTYYYTEGSSRGGNY 351
S +G GS +NSYSS Y + GS GGN+
Sbjct: 43 SASGLGSALGSNSYSSCYSFGTGSGYGGNF 72
>IMA3_CAEEL (Q19969) Importin alpha-3 subunit (Karyopherin alpha-3
subunit)
Length = 514
Score = 32.3 bits (72), Expect = 3.7
Identities = 21/61 (34%), Positives = 33/61 (53%), Gaps = 4/61 (6%)
Query: 482 VIEPLVAQLSNRDINVADEAAVALTKFASPDNFLYVEHSKKIIEFDAVPAVMKLLRSNEV 541
++ LV LS+ D N+ EAA ALT AS + E ++ ++ AVP ++LL +
Sbjct: 109 ILPVLVQCLSSTDPNLQFEAAWALTNIASGTS----EQTQAVVNAGAVPLFLQLLSCGNL 164
Query: 542 N 542
N
Sbjct: 165 N 165
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.317 0.132 0.367
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 64,885,615
Number of Sequences: 164201
Number of extensions: 2547679
Number of successful extensions: 7646
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 7587
Number of HSP's gapped (non-prelim): 74
length of query: 612
length of database: 59,974,054
effective HSP length: 116
effective length of query: 496
effective length of database: 40,926,738
effective search space: 20299662048
effective search space used: 20299662048
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 69 (31.2 bits)
Medicago: description of AC126783.5