BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC126783.2 + phase: 0
(147 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
R27C_ARATH (P49637) 60S ribosomal protein L27a-3 265 3e-71
R27B_ARATH (Q9LR33) 60S ribosomal protein L27a-2 258 4e-69
RL2A_DICDI (P48160) 60S ribosomal protein L27a 199 2e-51
RL2A_RAT (P18445) 60S ribosomal protein L27a 190 8e-49
RL2A_OSCBR (O01358) 60S ribosomal protein L27a (Ribosomal protei... 190 1e-48
RL28_YEAST (P02406) 60S ribosomal protein L28 (L27A) (L29) (YL24... 189 2e-48
RL2A_HUMAN (P46776) 60S ribosomal protein L27a 188 3e-48
RL2A_MOUSE (P14115) 60S ribosomal protein L27a (L29) 188 4e-48
RL28_NEUCR (P08978) 60S ribosomal protein L28 (L27A) (L29) (CRP1) 186 1e-47
RL2A_DROME (P41092) 60S ribosomal protein L27a 185 3e-47
RL2A_XENLA (P47830) 60S ribosomal protein L27a (L22) 184 5e-47
RL2A_ERYGR (P78987) 60S ribosomal protein L27a (L29) 182 3e-46
R28B_SCHPO (P57728) 60S ribosomal protein L28-B 181 7e-46
R28A_SCHPO (P36585) 60S ribosomal protein L28-A (L27A) (L29) 181 7e-46
RL2A_TETTH (Q00454) 60S ribosomal protein L27a (L29) 179 1e-45
RL2A_TENMO (Q27021) 60S ribosomal protein L27a 174 8e-44
RL2A_TRYBB (O15883) 60S ribosomal protein L27a (L29) 171 5e-43
RL2A_EUPCR (P48161) 60S ribosomal protein L27a (L29) 169 2e-42
RL2A_ENCCU (O62581) 60S ribosomal protein L27a 127 9e-30
RL2A_PIG (Q29333) 60S ribosomal protein L27a (Fragment) 100 1e-21
>R27C_ARATH (P49637) 60S ribosomal protein L27a-3
Length = 146
Score = 265 bits (676), Expect = 3e-71
Identities = 126/147 (85%), Positives = 137/147 (92%), Gaps = 1/147 (0%)
Query: 1 MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 60
MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY
Sbjct: 1 MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 60
Query: 61 FHKLRNKFYNPIVNIDKIASLIPQDVKEKALKENKAPVIDVTQFGFFKLLGKGVLPQNQP 120
FHKLRNKF+ PIVN+DK+ SL+P+DVK K+ K+N P+IDVTQ GFFK+LGKG LP+N+P
Sbjct: 61 FHKLRNKFFCPIVNLDKLWSLVPEDVKAKSTKDN-VPLIDVTQHGFFKVLGKGHLPENKP 119
Query: 121 FVVKTKLISKIAEKKIKEAGGAVVLTA 147
FVVK KLISK AEKKIKEAGGAVVLTA
Sbjct: 120 FVVKAKLISKTAEKKIKEAGGAVVLTA 146
>R27B_ARATH (Q9LR33) 60S ribosomal protein L27a-2
Length = 146
Score = 258 bits (658), Expect = 4e-69
Identities = 123/147 (83%), Positives = 134/147 (90%), Gaps = 1/147 (0%)
Query: 1 MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 60
M T KKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY
Sbjct: 1 MATALKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 60
Query: 61 FHKLRNKFYNPIVNIDKIASLIPQDVKEKALKENKAPVIDVTQFGFFKLLGKGVLPQNQP 120
FHKLRNKF+ PIVN+DK+ SL+P+DVK K+ K+N P+IDVTQ GFFK+LGKG LP+N+P
Sbjct: 61 FHKLRNKFFCPIVNLDKLWSLVPEDVKAKSSKDN-VPLIDVTQHGFFKVLGKGHLPENKP 119
Query: 121 FVVKTKLISKIAEKKIKEAGGAVVLTA 147
FVVK KLISK AEKKIKEAGGAVVLTA
Sbjct: 120 FVVKAKLISKTAEKKIKEAGGAVVLTA 146
>RL2A_DICDI (P48160) 60S ribosomal protein L27a
Length = 148
Score = 199 bits (505), Expect = 2e-51
Identities = 93/149 (62%), Positives = 118/149 (78%), Gaps = 3/149 (2%)
Query: 1 MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 60
M TRF K+RK RG V AG+GR+GKHRKHPGGRGNAGG+ HHRI FDKYHPGYFGK+GMR+
Sbjct: 1 MPTRFSKHRKSRGDVCAGYGRVGKHRKHPGGRGNAGGLTHHRINFDKYHPGYFGKLGMRH 60
Query: 61 FHKLRNKFYNPIVNIDKIASLIPQDVKEK--ALKENKAPVIDVTQFGFFKLLGKGVLPQN 118
FH LRN+++ P V+++KI +L+P+ V++ A + APV+DVTQ GFFK+LG G+LP
Sbjct: 61 FHLLRNQYHCPTVSLEKIWTLVPESVRKSLAAKNDGTAPVVDVTQKGFFKVLGHGILP-T 119
Query: 119 QPFVVKTKLISKIAEKKIKEAGGAVVLTA 147
QP +VK + SK+AEKKIK GGA +L A
Sbjct: 120 QPIIVKARYFSKVAEKKIKAVGGACILVA 148
>RL2A_RAT (P18445) 60S ribosomal protein L27a
Length = 147
Score = 190 bits (483), Expect = 8e-49
Identities = 91/147 (61%), Positives = 112/147 (75%), Gaps = 3/147 (2%)
Query: 3 TRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRYFH 62
+R +K RK RGHVS GHGRIGKHRKHPGGRGNAGGMHHHRI FDKYHPGYFGKVGMR++H
Sbjct: 2 SRLRKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGMHHHRINFDKYHPGYFGKVGMRHYH 61
Query: 63 KLRNKFYNPIVNIDKIASLIPQDVKEKALKENK--APVIDVTQFGFFKLLGKGVLPQNQP 120
RN+ + P VN+DK+ +L+ + + A K AP+IDV + G++K+LGKG LP+ QP
Sbjct: 62 LKRNQSFCPTVNLDKLWTLVSEQTRVNAAKNKNGVAPIIDVVRSGYYKVLGKGKLPK-QP 120
Query: 121 FVVKTKLISKIAEKKIKEAGGAVVLTA 147
+VK K S+ AE+KIK GGA VL A
Sbjct: 121 VIVKAKFFSRRAEEKIKGVGGACVLVA 147
>RL2A_OSCBR (O01358) 60S ribosomal protein L27a (Ribosomal protein
RPL-27)
Length = 145
Score = 190 bits (482), Expect = 1e-48
Identities = 93/147 (63%), Positives = 109/147 (73%), Gaps = 2/147 (1%)
Query: 1 MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 60
M +K RK RGHVS GHGRIGKHRKHPGGRGNAGG HHHRI DKYHPGYFGKVGMR
Sbjct: 1 MAHSLRKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGQHHHRINRDKYHPGYFGKVGMRV 60
Query: 61 FHKLRNKFYNPIVNIDKIASLIPQDVKEKALKENKAPVIDVTQFGFFKLLGKGVLPQNQP 120
FH +N Y P VN+D++ +L+P++ K K E KAPVID + G+FK+LGKG+LP+ QP
Sbjct: 61 FHLNKNHHYCPTVNVDRLWALVPEEQKTKVSAE-KAPVIDCVKAGYFKVLGKGLLPK-QP 118
Query: 121 FVVKTKLISKIAEKKIKEAGGAVVLTA 147
+VK K S AE KIK AGGA +L A
Sbjct: 119 LIVKAKFFSHEAENKIKAAGGACILVA 145
>RL28_YEAST (P02406) 60S ribosomal protein L28 (L27A) (L29) (YL24)
(RP62)
Length = 148
Score = 189 bits (479), Expect = 2e-48
Identities = 91/148 (61%), Positives = 113/148 (75%), Gaps = 4/148 (2%)
Query: 3 TRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRYFH 62
+RF K RK RGHVSAG GRIGKHRKHPGGRG AGG HHHRI DKYHPGYFGKVGMRYFH
Sbjct: 2 SRFTKTRKHRGHVSAGKGRIGKHRKHPGGRGMAGGEHHHRINMDKYHPGYFGKVGMRYFH 61
Query: 63 KLRNKFYNPIVNIDKIASLIPQDVKEKALK---ENKAPVIDVTQFGFFKLLGKGVLPQNQ 119
K + F+ P++N+DK+ +LIP+D +++ LK + APVID G+ K+LGKG +P N
Sbjct: 62 KQQAHFWKPVLNLDKLWTLIPEDKRDQYLKSASKETAPVIDTLAAGYGKILGKGRIP-NV 120
Query: 120 PFVVKTKLISKIAEKKIKEAGGAVVLTA 147
P +VK + +SK+AE+KI+ AGG V L A
Sbjct: 121 PVIVKARFVSKLAEEKIRAAGGVVELIA 148
>RL2A_HUMAN (P46776) 60S ribosomal protein L27a
Length = 147
Score = 188 bits (478), Expect = 3e-48
Identities = 89/147 (60%), Positives = 112/147 (75%), Gaps = 3/147 (2%)
Query: 3 TRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRYFH 62
+R +K RK RGHVS GHGRIGKHRKHPGGRGNAGG+HHHRI FDKYHPGYFGKVGM+++H
Sbjct: 2 SRLRKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGLHHHRINFDKYHPGYFGKVGMKHYH 61
Query: 63 KLRNKFYNPIVNIDKIASLIPQDVKEKALKE--NKAPVIDVTQFGFFKLLGKGVLPQNQP 120
RN+ + P VN+DK+ +L+ + + A K AP+IDV + G++K+LGKG LP+ QP
Sbjct: 62 LKRNQSFCPTVNLDKLWTLVSEQTRVNAAKNKTGAAPIIDVVRSGYYKVLGKGKLPK-QP 120
Query: 121 FVVKTKLISKIAEKKIKEAGGAVVLTA 147
+VK K S+ AE+KIK GGA VL A
Sbjct: 121 VIVKAKFFSRRAEEKIKSVGGACVLVA 147
>RL2A_MOUSE (P14115) 60S ribosomal protein L27a (L29)
Length = 147
Score = 188 bits (477), Expect = 4e-48
Identities = 91/147 (61%), Positives = 111/147 (74%), Gaps = 3/147 (2%)
Query: 3 TRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRYFH 62
+R +K RK RGHVS GHGRIGKHRKHPGGRGNAGGMHHHRI FDKYHPGYFGKVGMR++H
Sbjct: 2 SRLRKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGMHHHRINFDKYHPGYFGKVGMRHYH 61
Query: 63 KLRNKFYNPIVNIDKIASLIPQDVKEKALKENK--APVIDVTQFGFFKLLGKGVLPQNQP 120
RN+ + P VN+DK +L+ + + A K AP+IDV + G++K+LGKG LP+ QP
Sbjct: 62 LKRNQSFCPTVNLDKPWTLVSEQTRVNAAKNKTGVAPIIDVVRSGYYKVLGKGKLPK-QP 120
Query: 121 FVVKTKLISKIAEKKIKEAGGAVVLTA 147
+VK K S+ AE+KIK GGA VL A
Sbjct: 121 VIVKAKFFSRRAEEKIKGVGGACVLVA 147
>RL28_NEUCR (P08978) 60S ribosomal protein L28 (L27A) (L29) (CRP1)
Length = 149
Score = 186 bits (473), Expect = 1e-47
Identities = 92/150 (61%), Positives = 110/150 (73%), Gaps = 4/150 (2%)
Query: 1 MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 60
M TRF K RK RGHVSAG GR+GKHRKHPGGRG AGG HHHR DKYHPGYFGKVGMR+
Sbjct: 1 MPTRFSKTRKHRGHVSAGKGRVGKHRKHPGGRGMAGGQHHHRTNLDKYHPGYFGKVGMRH 60
Query: 61 FHKLRNKFYNPIVNIDKIASLIPQDVKEKALK---ENKAPVIDVTQFGFFKLLGKGVLPQ 117
FH LRN + PI+NI+K+ +L+P + +EK + APVID+ G+ KLLGKG LPQ
Sbjct: 61 FHLLRNHQWAPILNIEKLWTLVPAEAREKYVSGAATETAPVIDLLSHGYAKLLGKGRLPQ 120
Query: 118 NQPFVVKTKLISKIAEKKIKEAGGAVVLTA 147
P VV+ + +S AE+KIKEAGG + L A
Sbjct: 121 -VPIVVRARYVSAEAERKIKEAGGVIELVA 149
>RL2A_DROME (P41092) 60S ribosomal protein L27a
Length = 149
Score = 185 bits (469), Expect = 3e-47
Identities = 92/144 (63%), Positives = 109/144 (74%), Gaps = 3/144 (2%)
Query: 6 KKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRYFHKLR 65
KK RK RGHVS GHGRIGKHRKHPGGRGNAGGMHHHRI FDKYHPGYFGKVGMR FH R
Sbjct: 7 KKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGMHHHRINFDKYHPGYFGKVGMRNFHLRR 66
Query: 66 NKFYNPIVNIDKIASLIPQDVKEKALKE--NKAPVIDVTQFGFFKLLGKGVLPQNQPFVV 123
+ P +N+DK+ SL+ + + KE KAPVID+ +FG++KLLG+G LP +P +V
Sbjct: 67 QHKFRPEINLDKLWSLVGAEKFAELEKEKSTKAPVIDLVKFGYYKLLGRGHLPA-RPVIV 125
Query: 124 KTKLISKIAEKKIKEAGGAVVLTA 147
K K SK AE KIK+AGG +L+A
Sbjct: 126 KAKYFSKKAEDKIKKAGGVCLLSA 149
>RL2A_XENLA (P47830) 60S ribosomal protein L27a (L22)
Length = 147
Score = 184 bits (468), Expect = 5e-47
Identities = 87/147 (59%), Positives = 110/147 (74%), Gaps = 3/147 (2%)
Query: 3 TRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRYFH 62
++ +K RK RGHVS GHGRIGKHRKHPGGRGNAGGMHHHRI FDKYHPGYFGKVGMR++H
Sbjct: 2 SKLRKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGMHHHRINFDKYHPGYFGKVGMRHYH 61
Query: 63 KLRNKFYNPIVNIDKIASLIPQDVKEKALK--ENKAPVIDVTQFGFFKLLGKGVLPQNQP 120
+N+ + P +N+DK+ +L+ + + K E AP+ID G++K+LGKG LP+ QP
Sbjct: 62 LKKNQSFCPTINLDKLWTLVSEQTRLNHAKNLEGPAPIIDAVHAGYYKVLGKGKLPK-QP 120
Query: 121 FVVKTKLISKIAEKKIKEAGGAVVLTA 147
+VK K S+ AE+KIK GGA VL A
Sbjct: 121 VIVKAKFFSRKAEEKIKSVGGACVLGA 147
>RL2A_ERYGR (P78987) 60S ribosomal protein L27a (L29)
Length = 149
Score = 182 bits (461), Expect = 3e-46
Identities = 89/150 (59%), Positives = 106/150 (70%), Gaps = 4/150 (2%)
Query: 1 MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 60
M T K RK RGHVSAGHGR+GKHRKHPGGRG AGG HHHR DKYHPGYFGKVGMRY
Sbjct: 1 MPTHLSKTRKHRGHVSAGHGRVGKHRKHPGGRGLAGGQHHHRTNMDKYHPGYFGKVGMRY 60
Query: 61 FHKLRNKFYNPIVNIDKIASLIPQDVKEKALKENK---APVIDVTQFGFFKLLGKGVLPQ 117
FHK N F+ P++N++K+ SLIP + +E L PVID+ G+ K+LGKG +P+
Sbjct: 61 FHKQGNHFWKPVLNLEKLWSLIPAEKREAYLSSTNPDVIPVIDLLPLGYSKVLGKGRIPK 120
Query: 118 NQPFVVKTKLISKIAEKKIKEAGGAVVLTA 147
P VV+ + SK AE+KI EAGG V L A
Sbjct: 121 -VPLVVRARWFSKEAERKITEAGGVVELVA 149
>R28B_SCHPO (P57728) 60S ribosomal protein L28-B
Length = 148
Score = 181 bits (458), Expect = 7e-46
Identities = 88/149 (59%), Positives = 112/149 (75%), Gaps = 3/149 (2%)
Query: 1 MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 60
M T K RK RGHVSAGHGRIGKHRKHPGGRG AGG+ H R FDKYHPGYFGKVGMR
Sbjct: 1 MPTHTSKTRKLRGHVSAGHGRIGKHRKHPGGRGKAGGLQHLRSHFDKYHPGYFGKVGMRR 60
Query: 61 FHKLRNKFYNPIVNIDKIASLIPQDVKEKALKENK--APVIDVTQFGFFKLLGKGVLPQN 118
FH ++N + P VN+D++ +L+P + +EK L +N APVI+V Q G+ K+LGKG LP +
Sbjct: 61 FHLMKNPLWRPTVNLDRLWTLVPNETREKYLGKNTEVAPVINVLQSGYGKVLGKGRLP-D 119
Query: 119 QPFVVKTKLISKIAEKKIKEAGGAVVLTA 147
P +++T+ +S+ AE+KIK+AGG V L A
Sbjct: 120 TPVIIQTRYVSRRAEEKIKQAGGVVELIA 148
>R28A_SCHPO (P36585) 60S ribosomal protein L28-A (L27A) (L29)
Length = 148
Score = 181 bits (458), Expect = 7e-46
Identities = 88/149 (59%), Positives = 112/149 (75%), Gaps = 3/149 (2%)
Query: 1 MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 60
M T K RK RGHVSAGHGRIGKHRKHPGGRG AGG+ H R FDKYHPGYFGKVGMR
Sbjct: 1 MPTHVSKTRKLRGHVSAGHGRIGKHRKHPGGRGKAGGLQHLRSHFDKYHPGYFGKVGMRR 60
Query: 61 FHKLRNKFYNPIVNIDKIASLIPQDVKEKALKENK--APVIDVTQFGFFKLLGKGVLPQN 118
FH ++N + P VN+D++ +L+P + ++K L +N APVI+V Q G+ K+LGKG LP+
Sbjct: 61 FHLMKNPLWRPTVNLDRLWTLLPNEARDKYLGKNTEVAPVINVLQSGYGKVLGKGRLPET 120
Query: 119 QPFVVKTKLISKIAEKKIKEAGGAVVLTA 147
P +V+T+ +S+ AE+KIK+AGG V L A
Sbjct: 121 -PVIVQTRYVSRRAEEKIKQAGGVVELIA 148
>RL2A_TETTH (Q00454) 60S ribosomal protein L27a (L29)
Length = 149
Score = 179 bits (455), Expect = 1e-45
Identities = 92/150 (61%), Positives = 110/150 (73%), Gaps = 4/150 (2%)
Query: 1 MTTRFKKNRKKRGHVSAGHGRIGKHRKHP--GGRGNAGGMHHHRILFDKYHPGYFGKVGM 58
M + KK RK RGHVS GHGR+GKHRK GGRG AGGMHHHRIL +K+HPGY+GK+GM
Sbjct: 1 MVSHLKKTRKLRGHVSHGHGRVGKHRKGGCRGGRGKAGGMHHHRILMEKWHPGYYGKLGM 60
Query: 59 RYFHKLRNKFYNPIVNIDKIASLIPQDVKEK-ALKENKAPVIDVTQFGFFKLLGKGVLPQ 117
R FH +N + P+VNIDK+ SL+ ++K A + K PVIDVT+ GFFK+LGKG LP
Sbjct: 61 RTFHLKKNPLHCPVVNIDKLWSLVSDATRQKYAEDKKKVPVIDVTKAGFFKVLGKGRLP- 119
Query: 118 NQPFVVKTKLISKIAEKKIKEAGGAVVLTA 147
NQP VVK K SK AE++I GGA VLTA
Sbjct: 120 NQPVVVKAKYFSKTAERRIVAVGGACVLTA 149
>RL2A_TENMO (Q27021) 60S ribosomal protein L27a
Length = 148
Score = 174 bits (440), Expect = 8e-44
Identities = 85/149 (57%), Positives = 107/149 (71%), Gaps = 3/149 (2%)
Query: 1 MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 60
M+T KK RK RGHVS GHGRIGKHRKHPGGRGNAGGMHHHRI FDKYHPGYFGK+GMR
Sbjct: 1 MSTHKKKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGMHHHRINFDKYHPGYFGKLGMRN 60
Query: 61 FHKLRNKFYNPIVNIDKIASLIPQDVKEKALK--ENKAPVIDVTQFGFFKLLGKGVLPQN 118
+H RN + P +N+DK+ +L+ + + K E KAPVID+ + G++KLLGKG N
Sbjct: 61 YHLRRNSKWAPAINLDKLWTLVSEQTRSKYQNHPEGKAPVIDIVKAGYYKLLGKGACLTN 120
Query: 119 QPFVVKTKLISKIAEKKIKEAGGAVVLTA 147
+ + ++++ E KIK GGA VL+A
Sbjct: 121 LSLLKPSFSLNRL-EDKIKAVGGACVLSA 148
>RL2A_TRYBB (O15883) 60S ribosomal protein L27a (L29)
Length = 145
Score = 171 bits (433), Expect = 5e-43
Identities = 82/147 (55%), Positives = 103/147 (69%), Gaps = 2/147 (1%)
Query: 1 MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 60
M TRFKK R +RG G+GR+GKHRKHP GRGNAGG HHHRI F KYHPGYFGK GM +
Sbjct: 1 MPTRFKKTRHQRGSTFCGYGRVGKHRKHPSGRGNAGGEHHHRINFRKYHPGYFGKCGMNH 60
Query: 61 FHKLRNKFYNPIVNIDKIASLIPQDVKEKALKENKAPVIDVTQFGFFKLLGKGVLPQNQP 120
+HK +N + P +N+D + L+ +D KA K PVID+ G+ KLLG G L P
Sbjct: 61 YHKKKNTTWKPTINLDNLTKLMAKDEAMKAKKGEVLPVIDLLANGYSKLLGNGHL--QAP 118
Query: 121 FVVKTKLISKIAEKKIKEAGGAVVLTA 147
+VK + +SK+A+KKI++AGGAVVL A
Sbjct: 119 CIVKARWVSKLADKKIRKAGGAVVLQA 145
>RL2A_EUPCR (P48161) 60S ribosomal protein L27a (L29)
Length = 148
Score = 169 bits (428), Expect = 2e-42
Identities = 82/148 (55%), Positives = 109/148 (73%), Gaps = 2/148 (1%)
Query: 1 MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 60
MT + RK RGHVS GHGR+GKHRKHPGGRG AG HHHRI KYHPG+ GK GMR+
Sbjct: 1 MTHSKRNTRKLRGHVSHGHGRVGKHRKHPGGRGMAGPEHHHRINVFKYHPGHIGKHGMRH 60
Query: 61 FHKLRNKFYNPIVNIDKIASLIPQDVKEKA-LKENKAPVIDVTQFGFFKLLGKGVLPQNQ 119
FH +RN++Y P +N+ K+ SL+ ++ ++KA ++K +IDV + G++K+LGKG+LP+
Sbjct: 61 FHLMRNQYYCPSINLSKLWSLVTEEERQKAQTDKSKVILIDVVKHGYYKVLGKGLLPE-V 119
Query: 120 PFVVKTKLISKIAEKKIKEAGGAVVLTA 147
P VVK KL + AEK+IK+ GGA VL A
Sbjct: 120 PLVVKAKLFTPTAEKRIKQVGGACVLRA 147
>RL2A_ENCCU (O62581) 60S ribosomal protein L27a
Length = 147
Score = 127 bits (319), Expect = 9e-30
Identities = 64/147 (43%), Positives = 92/147 (62%), Gaps = 2/147 (1%)
Query: 1 MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 60
MT R KK RK RGHVS G+GR+GKHRKH GGRG AGG H + F ++HP Y GK GMR
Sbjct: 1 MTDRVKKTRKLRGHVSHGYGRVGKHRKHSGGRGLAGGFSHMKTFFTRFHPDYHGKRGMRV 60
Query: 61 FHKLRNKFYNPIVNIDKIASLIPQDVKEKAL-KENKAPVIDVTQFGFFKLLGKGVLPQNQ 119
+H+ N Y ++ ++ +IP++ + L K PVIDV +FG+ ++G G L +
Sbjct: 61 YHRKENSDYARPISSARLWGMIPKEQRYDFLDNPEKVPVIDVREFGYHVVVG-GKLSLER 119
Query: 120 PFVVKTKLISKIAEKKIKEAGGAVVLT 146
P VVK + + A+++I + GG ++T
Sbjct: 120 PIVVKARYFTPSAKEEITKVGGKWIIT 146
>RL2A_PIG (Q29333) 60S ribosomal protein L27a (Fragment)
Length = 53
Score = 100 bits (248), Expect = 1e-21
Identities = 43/52 (82%), Positives = 45/52 (85%)
Query: 3 TRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFG 54
+R + RK RGHVS GHGRIGKHRKHPGGRGNAGGMHHHRI FDKYH GYFG
Sbjct: 2 SRLRXTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGMHHHRINFDKYHXGYFG 53
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.322 0.142 0.422
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,789,095
Number of Sequences: 164201
Number of extensions: 898921
Number of successful extensions: 2318
Number of sequences better than 10.0: 73
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 32
Number of HSP's that attempted gapping in prelim test: 2193
Number of HSP's gapped (non-prelim): 77
length of query: 147
length of database: 59,974,054
effective HSP length: 100
effective length of query: 47
effective length of database: 43,553,954
effective search space: 2047035838
effective search space used: 2047035838
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 60 (27.7 bits)
Medicago: description of AC126783.2