BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC126782.15 + phase: 0
(1155 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UPL2_ARATH (Q8H0T4) E3 ubiquitin protein ligase UPL2 (EC 6.3.2.-... 40 0.037
UPL1_ARATH (Q8GY23) E3 ubiquitin protein ligase UPL1 (EC 6.3.2.-... 39 0.081
NKX3_MOUSE (Q99PD7) Sodium/potassium/calcium exchanger 3 precurs... 39 0.081
CAQ1_RANES (P31231) Calsequestrin, skeletal muscle isoform precu... 38 0.14
ARP8_YEAST (Q12386) Actin-like protein ARP8 38 0.18
NKX3_RAT (Q9EPQ0) Sodium/potassium/calcium exchanger 3 precursor... 37 0.31
A32B_HUMAN (Q92688) Acidic leucine-rich nuclear phosphoprotein 3... 37 0.31
VG48_SHV21 (Q01033) Hypothetical gene 48 protein 36 0.53
SAS3_YEAST (P34218) SAS3 protein 36 0.69
RPA1_DROME (P91875) DNA-directed RNA polymerase I largest subuni... 36 0.69
OMD_RAT (Q9Z1S7) Osteomodulin precursor (Osteoadherin) (OSAD) (K... 35 0.90
GARP_PLAFF (P13816) Glutamic acid-rich protein precursor 35 0.90
VDP_MOUSE (Q9Z1Z0) General vesicular transport factor p115 (Tran... 35 1.2
RPL1_HUMAN (Q8IWN7) Retinitis pigmentosa 1-like 1 protein 35 1.2
NKX3_HUMAN (Q9HC58) Sodium/potassium/calcium exchanger 3 precurs... 35 1.2
CH60_PLAFG (P34940) Chaperonin CPN60, mitochondrial precursor 35 1.2
GEA2_YEAST (P39993) ARF guanine-nucleotide exchange factor 2 35 1.5
ASF1_YEAST (P32447) Anti-silencing protein 1 35 1.5
NUCL_MOUSE (P09405) Nucleolin (Protein C23) 34 2.0
MFT1_YEAST (P33441) Mitochondrial fusion target protein 34 2.0
>UPL2_ARATH (Q8H0T4) E3 ubiquitin protein ligase UPL2 (EC 6.3.2.-)
(Ubiquitin-protein ligase 2)
Length = 3658
Score = 40.0 bits (92), Expect = 0.037
Identities = 27/83 (32%), Positives = 46/83 (54%), Gaps = 10/83 (12%)
Query: 1063 RGRIETEERNEEVAYQADDMTHVNEIIEVDQVTSWQDSQVEGDQVDPSILEMRNEVEDEN 1122
RG T+ +E+ + D+ T + E I++D + ++EGDQ+ EM VED
Sbjct: 2069 RGSSLTQAMLQEMRIEGDE-TILPEPIQMD----FFREEIEGDQI-----EMSFHVEDRA 2118
Query: 1123 EDVVDDNNEGDHQDNQVDDGDVD 1145
+D VDD+ + + +D++ DD D D
Sbjct: 2119 DDDVDDDMDDEGEDDEGDDEDAD 2141
>UPL1_ARATH (Q8GY23) E3 ubiquitin protein ligase UPL1 (EC 6.3.2.-)
(Ubiquitin-protein ligase 1)
Length = 3684
Score = 38.9 bits (89), Expect = 0.081
Identities = 25/83 (30%), Positives = 46/83 (55%), Gaps = 10/83 (12%)
Query: 1063 RGRIETEERNEEVAYQADDMTHVNEIIEVDQVTSWQDSQVEGDQVDPSILEMRNEVEDEN 1122
RG +T+ +++ + D+ T + E I++D + ++EGDQ+ EM VE+
Sbjct: 2079 RGSSQTQAMPQDMRIEGDE-TILPEPIQMD----FMREEIEGDQI-----EMSFHVENRA 2128
Query: 1123 EDVVDDNNEGDHQDNQVDDGDVD 1145
+D VDD+ + +D++ DD D D
Sbjct: 2129 DDDVDDDMGDEGEDDEGDDEDAD 2151
>NKX3_MOUSE (Q99PD7) Sodium/potassium/calcium exchanger 3 precursor
(Na(+)/K(+)/Ca(2+)-exchange protein 3)
Length = 645
Score = 38.9 bits (89), Expect = 0.081
Identities = 20/53 (37%), Positives = 30/53 (55%), Gaps = 2/53 (3%)
Query: 1095 TSWQDSQVEGDQVDPSILEMRNEVEDENEDVVDDNNEGDHQDNQVDDGDVDEY 1147
+S D V G + D + E NE E+ENED ++NNE D ++ + +D D Y
Sbjct: 387 SSAPDRGVNGTRRDDIVAETDNETENENED--NENNESDEEEEEDEDDDEGPY 437
>CAQ1_RANES (P31231) Calsequestrin, skeletal muscle isoform precursor
Length = 420
Score = 38.1 bits (87), Expect = 0.14
Identities = 19/66 (28%), Positives = 35/66 (52%), Gaps = 8/66 (12%)
Query: 1081 DMTHVNEIIEVDQVTSWQDSQVEGDQVDPSILEMRNEVEDENEDVVDDNNEGDHQDNQVD 1140
DM ++ VD++ W + +EG E+ E +D+++D DD+++ D D+ D
Sbjct: 348 DMDDEEDLPTVDELEDWIEDVLEG--------EVNTEDDDDDDDDDDDDDDDDDDDDDDD 399
Query: 1141 DGDVDE 1146
D D D+
Sbjct: 400 DDDDDD 405
Score = 33.1 bits (74), Expect = 4.5
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Query: 1084 HVNEIIEVDQVTSWQDSQVEGDQVDPSILEMRNEVED--ENEDVVDDNNEGDHQDNQVDD 1141
H+ + D + W D E D P++ E+ + +ED E E +D+++ D D+ DD
Sbjct: 333 HIGVVNVTDADSVWMDMDDEEDL--PTVDELEDWIEDVLEGEVNTEDDDDDDDDDDDDDD 390
Query: 1142 GDVDE 1146
D D+
Sbjct: 391 DDDDD 395
>ARP8_YEAST (Q12386) Actin-like protein ARP8
Length = 881
Score = 37.7 bits (86), Expect = 0.18
Identities = 27/87 (31%), Positives = 46/87 (52%), Gaps = 7/87 (8%)
Query: 1069 EERNEEVAYQADDMTHVNEIIE-VDQVTSWQDSQ-VEGDQVDPSILEMRNEVEDENEDVV 1126
EE + ++ QAD NE + VD V + + V G VDP R+ ++E+ED
Sbjct: 31 EENSVPLSSQADQENAENESDDSVDNVVGSETPRSVTGLSVDP-----RDVADEEDEDEE 85
Query: 1127 DDNNEGDHQDNQVDDGDVDEYNYASDN 1153
++ + D DN VD+ D ++ + A++N
Sbjct: 86 GEDEDEDEDDNDVDNEDENDNDNANEN 112
>NKX3_RAT (Q9EPQ0) Sodium/potassium/calcium exchanger 3 precursor
(Na(+)/K(+)/Ca(2+)-exchange protein 3) (Fragment)
Length = 624
Score = 37.0 bits (84), Expect = 0.31
Identities = 19/47 (40%), Positives = 28/47 (59%), Gaps = 3/47 (6%)
Query: 1095 TSWQDSQVEGDQVDPSILEMRNEVEDENEDVVDDNNEGDHQDNQVDD 1141
+S D V G + D + E NE E+ENE D+NNE D ++++ DD
Sbjct: 369 SSAPDRGVNGTRRDDIVAEADNETENENE---DENNENDEEEDEDDD 412
>A32B_HUMAN (Q92688) Acidic leucine-rich nuclear phosphoprotein 32
family member B (PHAPI2 protein) (Silver-stainable
protein SSP29) (Acidic protein rich in leucines)
Length = 251
Score = 37.0 bits (84), Expect = 0.31
Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 8/88 (9%)
Query: 1066 IETEERNEEVAYQADDMTHVNEIIEVDQVTSWQDSQVEGDQVDPSILEMRNEV----EDE 1121
++ EE +EE + D+ E E D+ +D VEGD+ D + E E EDE
Sbjct: 165 VDEEEEDEEGEDEEDEDDEDGEEEEFDEEDD-EDEDVEGDEDDDEVSEEEEEFGLDEEDE 223
Query: 1122 NEDVVDDNNE---GDHQDNQVDDGDVDE 1146
+ED ++ E G+ + + DD D+
Sbjct: 224 DEDEDEEEEEGGKGEKRKRETDDEGEDD 251
>VG48_SHV21 (Q01033) Hypothetical gene 48 protein
Length = 797
Score = 36.2 bits (82), Expect = 0.53
Identities = 27/84 (32%), Positives = 42/84 (49%), Gaps = 10/84 (11%)
Query: 1063 RGRIETEERNEEVAYQADDMTHVNEIIEVDQVTSWQDSQVEGDQVDPSILEMRNEVEDEN 1122
R + E E NEE Y D+ E E D+ ++ + EGD + +E EDE
Sbjct: 400 RDKDEYELENEE--YNRDEEEDEGED-EEDEKDEKEEGEDEGDDGE-------DEGEDEG 449
Query: 1123 EDVVDDNNEGDHQDNQVDDGDVDE 1146
ED D+ +EGD +++ +D D +E
Sbjct: 450 EDEGDEGDEGDEGEDEGEDEDDEE 473
Score = 33.1 bits (74), Expect = 4.5
Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
Query: 1067 ETEERNEEVAYQADDMTHVNEIIEVDQVTSWQDS-QVEGDQVDPSILEMRNEVEDENEDV 1125
E E+ +E + +D E D+ +D + EGD+ + + +E EDE ED
Sbjct: 549 EGEDEGDEGEDEGEDEGDEGEDEGEDEGDEGEDEGEDEGDEGEDEGEDEGDEGEDEGEDE 608
Query: 1126 VDDNNEG-DHQDNQVDDGDVDE 1146
D+ +EG D D D+GD E
Sbjct: 609 GDEGDEGEDEGDEGEDEGDEGE 630
Score = 32.7 bits (73), Expect = 5.8
Identities = 17/49 (34%), Positives = 29/49 (58%), Gaps = 1/49 (2%)
Query: 1098 QDSQVEGDQVDPSILEMRNEVEDENEDVVDDNNEGDHQDNQVDDGDVDE 1146
+D EGD+ D E +E +DE ++ D+ +EGD +++ D+GD E
Sbjct: 450 EDEGDEGDEGDEGEDEGEDE-DDEEDEGEDEGDEGDEGEDEGDEGDEGE 497
Score = 32.0 bits (71), Expect = 9.9
Identities = 21/77 (27%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Query: 1067 ETEERNEEVAYQADDMTHVNEIIEVDQVTSWQDSQVEGDQVDPSILEMRNEVEDENEDVV 1126
E EE ++ + +D E D+ D EGD+ + E ++ EDE ED
Sbjct: 422 EDEEDEKDEKEEGEDEGDDGEDEGEDEGEDEGDEGDEGDEGEDEG-EDEDDEEDEGEDEG 480
Query: 1127 DDNNEGDHQDNQVDDGD 1143
D+ +EG+ + ++ D+G+
Sbjct: 481 DEGDEGEDEGDEGDEGE 497
>SAS3_YEAST (P34218) SAS3 protein
Length = 831
Score = 35.8 bits (81), Expect = 0.69
Identities = 20/75 (26%), Positives = 37/75 (48%), Gaps = 1/75 (1%)
Query: 1073 EEVAYQADDMTHVNEIIEVDQVTSWQDSQVEGDQVDPSILEMRNEVEDENEDVVDDNNEG 1132
+EV D +V E + D+ +D ++ D D I E +E ED E+ DD+ +G
Sbjct: 738 DEVENDVDTELYVGENAKEDEDED-EDFTLDDDIEDEQISEENDEEEDTYEEDSDDDEDG 796
Query: 1133 DHQDNQVDDGDVDEY 1147
+ + D+ D++ +
Sbjct: 797 KRKGQEQDENDIESH 811
Score = 32.7 bits (73), Expect = 5.8
Identities = 21/62 (33%), Positives = 34/62 (53%), Gaps = 3/62 (4%)
Query: 1094 VTSWQDSQVEGDQVDPSIL--EMRNEVEDENEDVVDDNNEGDHQDNQVDDGDVDEYNYAS 1151
++S + +VE D VD + E E EDE+ED D++ D Q ++ +D + D Y S
Sbjct: 732 ISSLEQDEVEND-VDTELYVGENAKEDEDEDEDFTLDDDIEDEQISEENDEEEDTYEEDS 790
Query: 1152 DN 1153
D+
Sbjct: 791 DD 792
>RPA1_DROME (P91875) DNA-directed RNA polymerase I largest subunit (EC
2.7.7.6)
Length = 1644
Score = 35.8 bits (81), Expect = 0.69
Identities = 23/87 (26%), Positives = 38/87 (43%), Gaps = 12/87 (13%)
Query: 1080 DDMTHVNEIIEVDQVTSWQDSQVEGDQVDPSILEMRNEVEDENEDVVDDNNEGDHQDNQV 1139
DD + N+ + V Q E D DP +E ++ D++++ D+++E QD
Sbjct: 1364 DDSSDDNDDDDATGVKLKQRKTDEKDYDDPDDVEELHDANDDDDEAEDEDDEEKGQDGND 1423
Query: 1140 DDGD------------VDEYNYASDNH 1154
+DGD V Y Y +NH
Sbjct: 1424 NDGDDKAVERLLSNDMVKAYTYDKENH 1450
>OMD_RAT (Q9Z1S7) Osteomodulin precursor (Osteoadherin) (OSAD)
(Keratan sulfate proteoglycan osteomodulin) (KSPG
osteomodulin)
Length = 423
Score = 35.4 bits (80), Expect = 0.90
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 13/71 (18%)
Query: 693 SSLPKHVLDPLIEISQF---FKNLCASTLRVDELEKMEKNMPIIIC--QLEQIFPPGFFD 747
S+LP H +D L+ ++ + +L STL+ L K+EK M + +C +LE + PPG
Sbjct: 175 STLPTHAMDGLVNVTMLDLCYNHLSDSTLKGKILSKLEKLMQLNLCNNRLESM-PPG--- 230
Query: 748 SMEHLPVHLAY 758
LP+ L Y
Sbjct: 231 ----LPLSLMY 237
>GARP_PLAFF (P13816) Glutamic acid-rich protein precursor
Length = 678
Score = 35.4 bits (80), Expect = 0.90
Identities = 20/87 (22%), Positives = 47/87 (53%), Gaps = 3/87 (3%)
Query: 1067 ETEERNEEVAYQADDMTHVNEIIEVDQVTSWQDSQVEGDQVDPSILEMRNEVEDENEDVV 1126
+ +E ++EV ++ ++ E +E D+ ++ + E ++ + E E E+E E+
Sbjct: 550 DKKEESKEVQEESKEVQEDEEEVEEDEEEEEEEEEEEEEEEEEE--EEEEEEEEEEEEDE 607
Query: 1127 DDNNEGDHQDNQVDDGDVDEYNYASDN 1153
D+ +E D ++++ DD + DE + D+
Sbjct: 608 DEEDEDDAEEDE-DDAEEDEDDAEEDD 633
Score = 34.3 bits (77), Expect = 2.0
Identities = 22/81 (27%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Query: 1066 IETEERNEEVAYQADDMTHVNEIIEVDQVTSWQDSQVEGDQVDPSILEMRNEVEDENEDV 1125
+E +E EE + ++ E E ++ ++ + E D+ D E E EDE++
Sbjct: 572 VEEDEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEDEDEEDEDDAEEDEDDAE-EDEDDAE 630
Query: 1126 VDDNNEGDHQDNQVDDGDVDE 1146
DD+ E D +++ +D D DE
Sbjct: 631 EDDDEEDDDEEDDDEDEDEDE 651
Score = 33.1 bits (74), Expect = 4.5
Identities = 18/84 (21%), Positives = 40/84 (47%), Gaps = 4/84 (4%)
Query: 1067 ETEERNEEVAYQADDMTHVNEIIEVDQVTSWQDSQVEGDQVDPSILEMRNEVEDENEDVV 1126
E +E EEV ++ E E ++ ++ + E ++ + E ++ E++ +D
Sbjct: 564 EVQEDEEEVEEDEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEDEDEEDEDDAEEDEDDAE 623
Query: 1127 DDNNEGDHQDNQVDD----GDVDE 1146
+D ++ + D++ DD D DE
Sbjct: 624 EDEDDAEEDDDEEDDDEEDDDEDE 647
Score = 32.7 bits (73), Expect = 5.8
Identities = 20/85 (23%), Positives = 37/85 (43%), Gaps = 2/85 (2%)
Query: 1061 KPRGRIETEE--RNEEVAYQADDMTHVNEIIEVDQVTSWQDSQVEGDQVDPSILEMRNEV 1118
K +IE E + + V + D E+ E + + +VE D+ + E E
Sbjct: 529 KKMAKIEEAELQKQKHVDKEEDKKEESKEVQEESKEVQEDEEEVEEDEEEEEEEEEEEEE 588
Query: 1119 EDENEDVVDDNNEGDHQDNQVDDGD 1143
E+E E+ ++ E + +D +D D
Sbjct: 589 EEEEEEEEEEEEEEEEEDEDEEDED 613
>VDP_MOUSE (Q9Z1Z0) General vesicular transport factor p115
(Transcytosis associated protein) (TAP) (Vesicle docking
protein) (Fragment)
Length = 941
Score = 35.0 bits (79), Expect = 1.2
Identities = 28/119 (23%), Positives = 54/119 (44%), Gaps = 27/119 (22%)
Query: 1055 SVAIKTKPRGRI-----ETEERNEEVAYQADDMTHVNEIIEVDQVT-------------S 1096
S A T GR+ ET+E E+ +++ T + + ++ T
Sbjct: 821 SAAKTTDVEGRLSALLQETKELKNEIKALSEERTAIQKQLDSSNSTIAILQTEKDKLDLE 880
Query: 1097 WQDSQVEGDQV-------DPSILEMRNEVEDENEDVVDDNNEGDHQDN--QVDDGDVDE 1146
DS+ E D + D IL ++++++D V +++ GD +D+ ++DDGD D+
Sbjct: 881 VTDSKKEQDDLLVLLADQDQKILSLKSKLKDLGHPVEEEDESGDQEDDDDEIDDGDKDQ 939
>RPL1_HUMAN (Q8IWN7) Retinitis pigmentosa 1-like 1 protein
Length = 2480
Score = 35.0 bits (79), Expect = 1.2
Identities = 21/70 (30%), Positives = 32/70 (45%)
Query: 1067 ETEERNEEVAYQADDMTHVNEIIEVDQVTSWQDSQVEGDQVDPSILEMRNEVEDENEDVV 1126
E EE +E QA + V E E ++ + VE +V+ E E + E+EDV
Sbjct: 2022 EAEEEAQEAEGQAQPESEVIESQEAEEEAQPESEDVEALEVEVETQEAEGEAQPESEDVE 2081
Query: 1127 DDNNEGDHQD 1136
EG+ Q+
Sbjct: 2082 APEAEGEMQE 2091
>NKX3_HUMAN (Q9HC58) Sodium/potassium/calcium exchanger 3 precursor
(Na(+)/K(+)/Ca(2+)-exchange protein 3)
Length = 644
Score = 35.0 bits (79), Expect = 1.2
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 1095 TSWQDSQVEGDQVDPSILEMRNEVEDENEDVVDDNNEGDHQDNQVDDGDVDEYNYAS 1151
+S D V G + D + E NE E+ENED ++N+E + +D D+G ++ S
Sbjct: 388 SSAPDRGVNGTRRDDVVAEAGNETENENED--NENDEEEEEDEDDDEGPYTPFDTPS 442
>CH60_PLAFG (P34940) Chaperonin CPN60, mitochondrial precursor
Length = 700
Score = 35.0 bits (79), Expect = 1.2
Identities = 20/58 (34%), Positives = 32/58 (54%), Gaps = 3/58 (5%)
Query: 1092 DQVTSWQDSQVEGDQVDPSILEMRNEVEDENEDVVDDNNEGDHQDNQVDDGDVDEYNY 1149
D+ T D + E D+ D L+ ++ +DE+E+ D+ +E D D +D DEYNY
Sbjct: 644 DEDTDEDDEEDEDDEDDEDDLD-DDDYDDEDEE--DEEDEEDEDDEDDEDSMNDEYNY 698
>GEA2_YEAST (P39993) ARF guanine-nucleotide exchange factor 2
Length = 1459
Score = 34.7 bits (78), Expect = 1.5
Identities = 22/109 (20%), Positives = 52/109 (47%), Gaps = 10/109 (9%)
Query: 1056 VAIKTKPRGRIETEERNEEVAYQADDMTHVNEIIEVDQVTSWQDSQVEGDQVDPSILEMR 1115
+A+ K +++T E +D ++ N++++ D + + +S+ EG Q DP +++
Sbjct: 219 IAVTVKIFSKLKTIEPVNVNQIYINDESYTNDVLKADTIGTNVESKEEGSQEDPIGMKVN 278
Query: 1116 N-EVEDENEDVVDDNNEGDHQDNQVDDGDVDEYN---------YASDNH 1154
N E E++ + +++ + N + D+ + YA DN+
Sbjct: 279 NEEAISEDDGIEEEHIHSEKSTNGAEQLDIVQKTTRSNSRIQAYADDNY 327
>ASF1_YEAST (P32447) Anti-silencing protein 1
Length = 279
Score = 34.7 bits (78), Expect = 1.5
Identities = 22/80 (27%), Positives = 40/80 (49%), Gaps = 4/80 (5%)
Query: 1067 ETEERNEEVAYQADDMTHVNEIIEVDQVTSWQ---DSQVEGDQVDPSILEMRNEVEDENE 1123
E N Q D + N + E +VT + D++ EGD P + +E E+++E
Sbjct: 120 EELRENPPAKVQVDHIVR-NILAEKPRVTRFNIVWDNENEGDLYPPEQPGVDDEEEEDDE 178
Query: 1124 DVVDDNNEGDHQDNQVDDGD 1143
+ DD ++ D +D+ +DG+
Sbjct: 179 EEDDDEDDEDDEDDDQEDGE 198
Score = 32.0 bits (71), Expect = 9.9
Identities = 21/86 (24%), Positives = 43/86 (49%), Gaps = 3/86 (3%)
Query: 1067 ETEERNEEVAYQADDMTHVNEIIEVDQVTSWQDSQVEGDQVDPSILEMRNEVEDENEDVV 1126
E EE +EE DD ++ E D +++ E ++ + + +E+E ED+
Sbjct: 172 EEEEDDEEEDDDEDDEDDEDDDQE-DGEGEAEEAAEEEEEEEEKTEDNETNLEEEEEDI- 229
Query: 1127 DDNNEGDHQDNQVDDGDVDEYNYASD 1152
+N++GD ++ + + G VD+ +D
Sbjct: 230 -ENSDGDEEEGEEEVGSVDKNEDGND 254
>NUCL_MOUSE (P09405) Nucleolin (Protein C23)
Length = 706
Score = 34.3 bits (77), Expect = 2.0
Identities = 19/90 (21%), Positives = 41/90 (45%)
Query: 1057 AIKTKPRGRIETEERNEEVAYQADDMTHVNEIIEVDQVTSWQDSQVEGDQVDPSILEMRN 1116
A P E ++ +E+ D+ + EV ++T+ + + V +
Sbjct: 181 AAPAAPASEDEEDDEDEDDEEDDDEEEEDDSEEEVMEITTAKGKKTPAKVVPMKAKSVAE 240
Query: 1117 EVEDENEDVVDDNNEGDHQDNQVDDGDVDE 1146
E +DE ED D++ + + +D++ DD + +E
Sbjct: 241 EEDDEEEDEDDEDEDDEEEDDEDDDEEEEE 270
>MFT1_YEAST (P33441) Mitochondrial fusion target protein
Length = 392
Score = 34.3 bits (77), Expect = 2.0
Identities = 25/96 (26%), Positives = 47/96 (48%), Gaps = 11/96 (11%)
Query: 1067 ETEERNEEVAYQADDMTHVNEIIEVDQVTSW---------QDSQVEGD-QVDPSILEMRN 1116
E EER E Q M VN I VD+ ++++ E D +VD ++ N
Sbjct: 268 EDEERKERFKRQRS-MVEVNTIENVDEKEESDHEYDDQEDEENEEEDDMEVDVEDIKEDN 326
Query: 1117 EVEDENEDVVDDNNEGDHQDNQVDDGDVDEYNYASD 1152
EV+ E+ D++ +G++++ + G ++E + +D
Sbjct: 327 EVDGESSQQEDNSRQGNNEETDKETGVIEEPDAVND 362
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.320 0.138 0.441
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 156,115,657
Number of Sequences: 164201
Number of extensions: 7325643
Number of successful extensions: 18431
Number of sequences better than 10.0: 74
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 58
Number of HSP's that attempted gapping in prelim test: 17862
Number of HSP's gapped (non-prelim): 353
length of query: 1155
length of database: 59,974,054
effective HSP length: 121
effective length of query: 1034
effective length of database: 40,105,733
effective search space: 41469327922
effective search space used: 41469327922
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 71 (32.0 bits)
Medicago: description of AC126782.15