BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC126780.2 - phase: 0 /pseudo
(297 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
INA1_CAEEL (Q03600) Integrin alpha ina-1 precursor 37 0.059
MAK3_YEAST (Q03503) L-A virus GAG protein N-acetyltransferase (E... 32 1.5
RPC2_CHLRE (Q7PCJ6) DNA-directed RNA polymerase beta'' chain (EC... 32 2.5
NAT5_MOUSE (P61600) N-acetyltransferase 5 (EC 2.3.1.-) 31 3.2
NAT5_HUMAN (P61599) N-acetyltransferase 5 (EC 2.3.1.-) 31 3.2
CPXY_BACSU (O08469) Cytochrome P450 (EC 1.14.-.-) 31 4.2
STA_ECOLI (P13018) Streptothricin acetyltransferase (EC 2.3.-.-) 30 5.5
KAPI_BOVIN (P24256) cAMP-dependent protein kinase, beta-2-cataly... 30 5.5
KAPB_RAT (P68182) cAMP-dependent protein kinase, beta-catalytic ... 30 5.5
KAPB_PIG (P05383) cAMP-dependent protein kinase, beta-catalytic ... 30 5.5
KAPB_MOUSE (P68181) cAMP-dependent protein kinase, beta-catalyti... 30 5.5
KAPB_HUMAN (P22694) cAMP-dependent protein kinase, beta-catalyti... 30 5.5
KAPB_CRIGR (P68180) cAMP-dependent protein kinase, beta-catalyti... 30 5.5
KAPB_BOVIN (P05131) cAMP-dependent protein kinase, beta-1 cataly... 30 5.5
AAC6_ENTAE (P50858) Aminoglycoside N(6')-acetyltransferase type ... 30 5.5
PROA_STRR6 (Q8DQ60) Gamma-glutamyl phosphate reductase (GPR) (EC... 30 9.4
PROA_STRPN (Q97R94) Gamma-glutamyl phosphate reductase (GPR) (EC... 30 9.4
NUC_BORBU (O51372) Putative endonuclease BB0411 (EC 3.1.30.-) 30 9.4
NU5M_ASTPE (P11993) NADH-ubiquinone oxidoreductase chain 5 (EC 1... 30 9.4
MTS3_STAAU (P16668) Modification methylase Sau3AI (EC 2.1.1.37) ... 30 9.4
>INA1_CAEEL (Q03600) Integrin alpha ina-1 precursor
Length = 1139
Score = 37.0 bits (84), Expect = 0.059
Identities = 37/137 (27%), Positives = 62/137 (45%), Gaps = 11/137 (8%)
Query: 159 NFTSLIIFLHPPTSFPTNHISKKDVKIDKISIDQAISFYTRILKTKELYPLDMDIILKEK 218
NF +L+ P S T H +K + + ID+ ++ K +PLDM I + E+
Sbjct: 488 NFVALLRS-RPVISIETKHKMEKRM----VDIDKGVNCPRG---AKTCFPLDMVIYVDEE 539
Query: 219 LSLGTWVSYYKDEGFKLNIEDIITHKSTTSSSWIIFS-LWNTCEACDNNLQVKTKLFQPL 277
G + + + F N+E I TT+ +I S N C +N V+ + ++ L
Sbjct: 540 TKRGAELVDFSSDVFMCNLEAIPFRADTTARGFIEGSHSHNYSWPCGSNSHVQKRTYRQL 599
Query: 278 RFLHATLNHAKDKICPL 294
+L + +KD I PL
Sbjct: 600 IYL--PVQESKDWITPL 614
>MAK3_YEAST (Q03503) L-A virus GAG protein N-acetyltransferase (EC
2.3.1.-)
Length = 176
Score = 32.3 bits (72), Expect = 1.5
Identities = 22/68 (32%), Positives = 30/68 (43%)
Query: 84 GCIKSVQTPSGSLFKMGCILGLRVSPIHRRKGVGLKLVTSIEEWMLTNGADYAFLATEKN 143
GCI P ++ G I L V +R G+ KLV + M D L TE
Sbjct: 63 GCIVCKMDPHRNVRLRGYIGMLAVESTYRGHGIAKKLVEIAIDKMQREHCDEIMLETEVE 122
Query: 144 NNASKNLF 151
N+A+ NL+
Sbjct: 123 NSAALNLY 130
>RPC2_CHLRE (Q7PCJ6) DNA-directed RNA polymerase beta'' chain (EC
2.7.7.6) (PEP) (Plastid-encoded RNA polymerase beta''
subunit) (RNA polymerase beta'' subunit)
Length = 3120
Score = 31.6 bits (70), Expect = 2.5
Identities = 21/61 (34%), Positives = 30/61 (48%), Gaps = 2/61 (3%)
Query: 127 WMLTNGADYAFLATEKNNNASKNLFTNKCNYFNFTSLIIFLHPPTSFPTNHISKKDVKID 186
+ L N AFL + +N L+ NK NY N + II L PTS + SKK + +
Sbjct: 862 FQLVNSNKTAFLVSLSHNKNRLTLYHNKFNYNNSYNDIIVL--PTSLTQDISSKKQIALK 919
Query: 187 K 187
+
Sbjct: 920 R 920
>NAT5_MOUSE (P61600) N-acetyltransferase 5 (EC 2.3.1.-)
Length = 178
Score = 31.2 bits (69), Expect = 3.2
Identities = 32/128 (25%), Positives = 53/128 (41%), Gaps = 20/128 (15%)
Query: 38 TTKKGFS---IFTNMMSNGDPLSRIRFYPLHVMLVAEMVE--------SKELVGVVKGCI 86
TT + F+ +F N DPL+ P ++ +A E EL+G + G
Sbjct: 2 TTLRAFTCDDLFRFNNINLDPLTETYGIPFYLQYLAHWPEYFIVAEAPGGELMGYIMG-- 59
Query: 87 KSVQTPSGSLFKM---GCILGLRVSPIHRRKGVGLKLVTSIEEWMLTNGADYAFLATEKN 143
GS+ + G + L V+P RR G+ KL+ +EE G + L +
Sbjct: 60 ----KAEGSVAREEWHGHVTALSVAPEFRRLGLAAKLMELLEEISERKGGFFVDLFVRVS 115
Query: 144 NNASKNLF 151
N + N++
Sbjct: 116 NQVAVNMY 123
>NAT5_HUMAN (P61599) N-acetyltransferase 5 (EC 2.3.1.-)
Length = 178
Score = 31.2 bits (69), Expect = 3.2
Identities = 32/128 (25%), Positives = 53/128 (41%), Gaps = 20/128 (15%)
Query: 38 TTKKGFS---IFTNMMSNGDPLSRIRFYPLHVMLVAEMVE--------SKELVGVVKGCI 86
TT + F+ +F N DPL+ P ++ +A E EL+G + G
Sbjct: 2 TTLRAFTCDDLFRFNNINLDPLTETYGIPFYLQYLAHWPEYFIVAEAPGGELMGYIMG-- 59
Query: 87 KSVQTPSGSLFKM---GCILGLRVSPIHRRKGVGLKLVTSIEEWMLTNGADYAFLATEKN 143
GS+ + G + L V+P RR G+ KL+ +EE G + L +
Sbjct: 60 ----KAEGSVAREEWHGHVTALSVAPEFRRLGLAAKLMELLEEISERKGGFFVDLFVRVS 115
Query: 144 NNASKNLF 151
N + N++
Sbjct: 116 NQVAVNMY 123
>CPXY_BACSU (O08469) Cytochrome P450 (EC 1.14.-.-)
Length = 410
Score = 30.8 bits (68), Expect = 4.2
Identities = 20/61 (32%), Positives = 30/61 (48%), Gaps = 12/61 (19%)
Query: 191 DQAISFYTRILKTKELYPLDMDIILKEKLSLGTWVSYY-------KDEGFKLNIEDIITH 243
D+A FY + K++ LYPL + + K G +S Y K+E K N E++ T
Sbjct: 24 DEAYEFYKELRKSQALYPLSLGALGK-----GWLISRYDDAIHLLKNEKLKKNYENVFTA 78
Query: 244 K 244
K
Sbjct: 79 K 79
>STA_ECOLI (P13018) Streptothricin acetyltransferase (EC 2.3.-.-)
Length = 174
Score = 30.4 bits (67), Expect = 5.5
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Query: 107 VSPIHRRKGVGLKLVTSIEEWMLTNGADYAFLATEKNNNASKNLFTNKCNY 157
VS HR KGV L+ ++W L+ L T+ NN + NL+ KC +
Sbjct: 91 VSHTHRGKGVAHSLIEFAKKWALSRQLLGIRLETQTNNVPACNLYA-KCGF 140
>KAPI_BOVIN (P24256) cAMP-dependent protein kinase, beta-2-catalytic
subunit (EC 2.7.1.37) (PKA C-beta-2)
Length = 397
Score = 30.4 bits (67), Expect = 5.5
Identities = 21/63 (33%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
Query: 191 DQAISFYTRILKTKELYPLDMDIILKEKLSLGTWVSYYKDEG-FKLNIEDIITHKSTTSS 249
DQ I Y +I+ K +P LK+ L V K G K + DI THK ++
Sbjct: 288 DQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVSDIKTHKWFATT 347
Query: 250 SWI 252
WI
Sbjct: 348 DWI 350
>KAPB_RAT (P68182) cAMP-dependent protein kinase, beta-catalytic
subunit (EC 2.7.1.37) (PKA C-beta)
Length = 350
Score = 30.4 bits (67), Expect = 5.5
Identities = 21/63 (33%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
Query: 191 DQAISFYTRILKTKELYPLDMDIILKEKLSLGTWVSYYKDEG-FKLNIEDIITHKSTTSS 249
DQ I Y +I+ K +P LK+ L V K G K + DI THK ++
Sbjct: 241 DQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVSDIKTHKWFATT 300
Query: 250 SWI 252
WI
Sbjct: 301 DWI 303
>KAPB_PIG (P05383) cAMP-dependent protein kinase, beta-catalytic
subunit (EC 2.7.1.37) (PKA C-beta)
Length = 350
Score = 30.4 bits (67), Expect = 5.5
Identities = 21/63 (33%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
Query: 191 DQAISFYTRILKTKELYPLDMDIILKEKLSLGTWVSYYKDEG-FKLNIEDIITHKSTTSS 249
DQ I Y +I+ K +P LK+ L V K G K + DI THK ++
Sbjct: 241 DQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVSDIKTHKWFATT 300
Query: 250 SWI 252
WI
Sbjct: 301 DWI 303
>KAPB_MOUSE (P68181) cAMP-dependent protein kinase, beta-catalytic
subunit (EC 2.7.1.37) (PKA C-beta)
Length = 350
Score = 30.4 bits (67), Expect = 5.5
Identities = 21/63 (33%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
Query: 191 DQAISFYTRILKTKELYPLDMDIILKEKLSLGTWVSYYKDEG-FKLNIEDIITHKSTTSS 249
DQ I Y +I+ K +P LK+ L V K G K + DI THK ++
Sbjct: 241 DQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVSDIKTHKWFATT 300
Query: 250 SWI 252
WI
Sbjct: 301 DWI 303
>KAPB_HUMAN (P22694) cAMP-dependent protein kinase, beta-catalytic
subunit (EC 2.7.1.37) (PKA C-beta)
Length = 350
Score = 30.4 bits (67), Expect = 5.5
Identities = 21/63 (33%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
Query: 191 DQAISFYTRILKTKELYPLDMDIILKEKLSLGTWVSYYKDEG-FKLNIEDIITHKSTTSS 249
DQ I Y +I+ K +P LK+ L V K G K + DI THK ++
Sbjct: 241 DQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVSDIKTHKWFATT 300
Query: 250 SWI 252
WI
Sbjct: 301 DWI 303
>KAPB_CRIGR (P68180) cAMP-dependent protein kinase, beta-catalytic
subunit (EC 2.7.1.37) (PKA C-beta)
Length = 350
Score = 30.4 bits (67), Expect = 5.5
Identities = 21/63 (33%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
Query: 191 DQAISFYTRILKTKELYPLDMDIILKEKLSLGTWVSYYKDEG-FKLNIEDIITHKSTTSS 249
DQ I Y +I+ K +P LK+ L V K G K + DI THK ++
Sbjct: 241 DQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVSDIKTHKWFATT 300
Query: 250 SWI 252
WI
Sbjct: 301 DWI 303
>KAPB_BOVIN (P05131) cAMP-dependent protein kinase, beta-1 catalytic
subunit (EC 2.7.1.37) (PKA C-beta-1)
Length = 350
Score = 30.4 bits (67), Expect = 5.5
Identities = 21/63 (33%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
Query: 191 DQAISFYTRILKTKELYPLDMDIILKEKLSLGTWVSYYKDEG-FKLNIEDIITHKSTTSS 249
DQ I Y +I+ K +P LK+ L V K G K + DI THK ++
Sbjct: 241 DQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVSDIKTHKWFATT 300
Query: 250 SWI 252
WI
Sbjct: 301 DWI 303
>AAC6_ENTAE (P50858) Aminoglycoside N(6')-acetyltransferase type 1
(EC 2.3.1.82) (AAC(6'))
Length = 152
Score = 30.4 bits (67), Expect = 5.5
Identities = 17/44 (38%), Positives = 22/44 (49%)
Query: 104 GLRVSPIHRRKGVGLKLVTSIEEWMLTNGADYAFLATEKNNNAS 147
G V P RR+GVG+ LV + E W G T+ N+AS
Sbjct: 87 GWYVVPSARRQGVGVALVKAAEHWARGRGCTEFASDTQLTNSAS 130
>PROA_STRR6 (Q8DQ60) Gamma-glutamyl phosphate reductase (GPR) (EC
1.2.1.41) (Glutamate-5-semialdehyde dehydrogenase)
(Glutamyl-gamma-semialdehyde dehydrogenase) (GSA
dehydrogenase)
Length = 420
Score = 29.6 bits (65), Expect = 9.4
Identities = 13/36 (36%), Positives = 20/36 (55%)
Query: 88 SVQTPSGSLFKMGCILGLRVSPIHRRKGVGLKLVTS 123
S + G F +GC +G+ +H R +GLK +TS
Sbjct: 372 STRFTDGGQFGLGCEMGISTQKLHARGPMGLKELTS 407
>PROA_STRPN (Q97R94) Gamma-glutamyl phosphate reductase (GPR) (EC
1.2.1.41) (Glutamate-5-semialdehyde dehydrogenase)
(Glutamyl-gamma-semialdehyde dehydrogenase) (GSA
dehydrogenase)
Length = 420
Score = 29.6 bits (65), Expect = 9.4
Identities = 13/36 (36%), Positives = 20/36 (55%)
Query: 88 SVQTPSGSLFKMGCILGLRVSPIHRRKGVGLKLVTS 123
S + G F +GC +G+ +H R +GLK +TS
Sbjct: 372 STRFTDGGQFGLGCEMGISTQKLHARGPMGLKELTS 407
>NUC_BORBU (O51372) Putative endonuclease BB0411 (EC 3.1.30.-)
Length = 195
Score = 29.6 bits (65), Expect = 9.4
Identities = 23/98 (23%), Positives = 38/98 (38%), Gaps = 12/98 (12%)
Query: 115 GVGLKLVTSIEEWMLTNGADY---AFLATEKNNNASKNLFTNKCNYF---------NFTS 162
G+ LKL + EW ++ G Y A + TE KN N++ N+
Sbjct: 78 GIWLKLEKLVREWAISKGYIYIISAGILTENKGFIGKNKILIPKNFYKIVLAINNNNYYD 137
Query: 163 LIIFLHPPTSFPTNHISKKDVKIDKISIDQAISFYTRI 200
+I F+ P + V +D I I F+ ++
Sbjct: 138 IISFIIPNEKAKDLDLENYVVSVDLIEKKTKIDFFEKL 175
>NU5M_ASTPE (P11993) NADH-ubiquinone oxidoreductase chain 5 (EC
1.6.5.3)
Length = 643
Score = 29.6 bits (65), Expect = 9.4
Identities = 20/69 (28%), Positives = 33/69 (46%), Gaps = 3/69 (4%)
Query: 196 FYTRILKTK---ELYPLDMDIILKEKLSLGTWVSYYKDEGFKLNIEDIITHKSTTSSSWI 252
F+T +LKT L+PL ++II + + ++ + GF LN+E K T S
Sbjct: 60 FFTSLLKTLAILSLFPLFIEIIFNIPDTTVSLFNWLPNNGFSLNVEFRFDLKFNTFLSVA 119
Query: 253 IFSLWNTCE 261
+ W+ E
Sbjct: 120 LIVSWSILE 128
>MTS3_STAAU (P16668) Modification methylase Sau3AI (EC 2.1.1.37)
(Cytosine-specific methyltransferase Sau3AI) (M.Sau3AI)
Length = 412
Score = 29.6 bits (65), Expect = 9.4
Identities = 31/131 (23%), Positives = 54/131 (40%), Gaps = 18/131 (13%)
Query: 126 EWMLTNGADYA---------FLATEKNNNASKNLFTN---KCNYFNFTSLIIFLHPPTSF 173
EW + N ADY +++ N SK + + K Y N L P +
Sbjct: 158 EWRVINAADYGNAQRRRRVFIFGYKQDLNYSKAMEESPLDKIIYHN--GLFAEAFPIEDY 215
Query: 174 PT-NHISKKDVKIDKISIDQAISFY---TRILKTKELYPLDMDIILKEKLSLGTWVSYYK 229
N +++ + D + I SF + I+K E+ +D ++ ++LG +
Sbjct: 216 ANKNRVNRTHITHDIVDISDNFSFQFYNSGIMKNGEILTIDTIPKYEKSVTLGEIIESNV 275
Query: 230 DEGFKLNIEDI 240
D+GF LN + I
Sbjct: 276 DDGFSLNQDQI 286
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.321 0.137 0.405
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 34,838,756
Number of Sequences: 164201
Number of extensions: 1415156
Number of successful extensions: 3228
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 3224
Number of HSP's gapped (non-prelim): 20
length of query: 297
length of database: 59,974,054
effective HSP length: 109
effective length of query: 188
effective length of database: 42,076,145
effective search space: 7910315260
effective search space used: 7910315260
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 65 (29.6 bits)
Medicago: description of AC126780.2