BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC126009.11 - phase: 0
(176 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BCP_PEA (Q41001) Blue copper protein precursor 89 7e-18
BCB1_ARATH (Q07488) Blue copper protein precursor (Blue copper-b... 84 2e-16
MAVI_CUCPE (P80728) Mavicyanin 80 2e-15
ENL1_ARATH (Q9SK27) Early nodulin-like protein 1 precursor (Phyt... 77 2e-14
ENL2_ARATH (Q9T076) Early nodulin-like protein 2 precursor (Phyt... 76 3e-14
BABL_LILLO (P60496) Chemocyanin precursor (Basic blue protein) (... 74 2e-13
BABL_CUCSA (P00303) Basic blue protein (Cusacyanin) (Plantacyani... 74 2e-13
BCB2_ARATH (O80517) Uclacyanin II precursor (Blue copper-binding... 73 4e-13
STEL_RHUVE (P00302) Stellacyanin 71 1e-12
N552_SOYBN (Q02917) Early nodulin 55-2 precursor (N-55-2) (Nodul... 70 2e-12
BABL_ARATH (Q8LG89) Putative basic blue protein precursor (Plant... 70 2e-12
UMEC_ARMRU (P42849) Umecyanin (UMC) 68 1e-11
ENL3_ARATH (Q8LC95) Early nodulin-like protein 3 precursor (Phyt... 66 4e-11
CPC_CUCSA (P29602) Cucumber peeling cupredoxin (CPC) (Stellacyanin) 66 4e-11
NO20_MEDTR (P93329) Early nodulin 20 precursor (N-20) 65 1e-10
NO16_MEDTR (P93328) Early nodulin 16 precursor (N-16) 59 8e-09
N551_SOYBN (Q05544) Early nodulin 55-1 (N-55-1) (Fragment) 58 1e-08
PSL1_HUMAN (Q8TCT7) Signal peptide peptidase-like 2B (EC 3.4.99.... 38 0.014
NCO3_MOUSE (O09000) Nuclear receptor coactivator 3 (EC 2.3.1.48)... 37 0.018
NUSA_MYCPN (P75591) Transcription elongation protein nusA 37 0.023
>BCP_PEA (Q41001) Blue copper protein precursor
Length = 189
Score = 88.6 bits (218), Expect = 7e-18
Identities = 57/159 (35%), Positives = 81/159 (50%), Gaps = 7/159 (4%)
Query: 1 MALSRALFLFALIASIFSTM-AVAKDFVVGDEKGWTTLFDYQTWTANKVFRLGDTLTFNY 59
MA S AL L L+A I + ++A + VGD GW DY TW ++K F +GD+L FNY
Sbjct: 1 MAFSNALVLCFLLAIINMALPSLATVYTVGDTSGWVIGGDYSTWASDKTFAVGDSLVFNY 60
Query: 60 VGGKDNVVRVNGSDFKSCSVPLTAPVLTSGQDKIIITTYGRRWYISSVTDHCENGQKLFI 119
G V V SD+KSC+ + ++G I + G+ ++I V H G KL I
Sbjct: 61 GAGAHTVDEVKESDYKSCTSGNSISTDSTGATTIPLKKAGKHYFICGVPGHSTGGMKLSI 120
Query: 120 TVQPKQDGWSPVPSPSPSPSLDLVTPEAPPSNAPWPASS 158
V+ G S PS +PS S + PS+ PA++
Sbjct: 121 KVK-ASSGSSAAPSATPSSS-----GKGSPSSDDTPAAT 153
>BCB1_ARATH (Q07488) Blue copper protein precursor (Blue
copper-binding protein) (AtBCB) (Stellacyanin)
(Phytocyanin 1)
Length = 196
Score = 83.6 bits (205), Expect = 2e-16
Identities = 49/140 (35%), Positives = 73/140 (52%), Gaps = 10/140 (7%)
Query: 16 IFSTMAV-AKDFVVGDEKGWTTLFD---YQTWTANKVFRLGDTLTFNYVGGKDNVVRVNG 71
+F+ + V A+D+ VGD+ WT D Y TW K FR+GD L F++ G+ +V V+
Sbjct: 14 VFAAVVVFAEDYDVGDDTEWTRPMDPEFYTTWATGKTFRVGDELEFDFAAGRHDVAVVSE 73
Query: 72 SDFKSCSVPLTAPVLTSGQDKIIITTYGRRWYISSVTDHCENGQKLFITVQP------KQ 125
+ F++C +T KI++ T G +++I +V DHC GQKL ITV
Sbjct: 74 AAFENCEKEKPISHMTVPPVKIMLNTTGPQYFICTVGDHCRFGQKLSITVVAAGATGGAT 133
Query: 126 DGWSPVPSPSPSPSLDLVTP 145
G P+P +PS TP
Sbjct: 134 PGAGATPAPGSTPSTGGTTP 153
>MAVI_CUCPE (P80728) Mavicyanin
Length = 108
Score = 80.1 bits (196), Expect = 2e-15
Identities = 40/98 (40%), Positives = 56/98 (56%), Gaps = 2/98 (2%)
Query: 28 VGDEKGWTTL--FDYQTWTANKVFRLGDTLTFNYVGGKDNVVRVNGSDFKSCSVPLTAPV 85
VGD GWTTL +DY W ++ F +GD+L FNY NV++V+ FKSC+ A
Sbjct: 6 VGDSTGWTTLVPYDYAKWASSNKFHVGDSLLFNYNNKFHNVLQVDQEQFKSCNSSSPAAS 65
Query: 86 LTSGQDKIIITTYGRRWYISSVTDHCENGQKLFITVQP 123
TSG D I + G +++ + HC+ GQK+ I V P
Sbjct: 66 YTSGADSIPLKRPGTFYFLCGIPGHCQLGQKVEIKVDP 103
>ENL1_ARATH (Q9SK27) Early nodulin-like protein 1 precursor
(Phytocyanin-like protein)
Length = 176
Score = 77.0 bits (188), Expect = 2e-14
Identities = 51/167 (30%), Positives = 77/167 (45%), Gaps = 22/167 (13%)
Query: 1 MALSRALFLFALIASIFSTMAVAKDFVVGDEKG-W----TTLFDYQTWTANKVFRLGDTL 55
+A+ +FLF+L A A + VG + G W ++ + + W F++GD +
Sbjct: 8 VAIFSLIFLFSL--------AAANEVTVGGKSGDWKIPPSSSYSFTEWAQKARFKVGDFI 59
Query: 56 TFNYVGGKDNVVRVNGSDFKSCSVPLTAPVLTSGQDKIIITTYGRRWYISSVTDHCENGQ 115
F Y GKD+V+ V + SC+ T G+ K+ + G ++IS HCE GQ
Sbjct: 60 VFRYESGKDSVLEVTKEAYNSCNTTNPLANYTDGETKVKLDRSGPFYFISGANGHCEKGQ 119
Query: 116 KL-FITVQPKQDGWSPVPSPSPSPSLDLVTPEAPPSNAPWPASSVPR 161
KL + + P+ SP PSP V E P+ AP P S R
Sbjct: 120 KLSLVVISPRHSVISPAPSP--------VEFEDGPALAPAPISGSVR 158
>ENL2_ARATH (Q9T076) Early nodulin-like protein 2 precursor
(Phytocyanin-like protein)
Length = 349
Score = 76.3 bits (186), Expect = 3e-14
Identities = 51/162 (31%), Positives = 83/162 (50%), Gaps = 14/162 (8%)
Query: 8 FLFALIASIFS--TMAVAKDFVVGDEKGWTTL--FDYQTWTANKVFRLGDTLTFNYVGGK 63
F F ++ S+ + T++ A+ F VG W T +Y++W+ F + DTL F+Y G
Sbjct: 11 FFFTILLSLSTLFTISNARKFNVGGSGAWVTNPPENYESWSGKNRFLVHDTLYFSYAKGA 70
Query: 64 DNVVRVNGSDFKSCSVPLTAPVLTSGQDKIIITTYGRRWYISSVTDHCENGQKLFITVQP 123
D+V+ VN +D+ +C+ + G +I + YG ++IS D+C+ GQKL + V
Sbjct: 71 DSVLEVNKADYDACNTKNPIKRVDDGDSEISLDRYGPFYFISGNEDNCKKGQKLNVVVIS 130
Query: 124 KQDGWSPVPSPSPSP---SLDLVTPEA--PPSNAPWPASSVP 160
+ +PS + SP + TP + PP A P SS P
Sbjct: 131 AR-----IPSTAQSPHAAAPGSSTPGSMTPPGGAHSPKSSSP 167
>BABL_LILLO (P60496) Chemocyanin precursor (Basic blue protein)
(Plantacyanin)
Length = 126
Score = 73.9 bits (180), Expect = 2e-13
Identities = 45/118 (38%), Positives = 60/118 (50%), Gaps = 5/118 (4%)
Query: 5 RALFLFALIASIFSTMAVAKDFV--VGDEKGWTTLFDYQTWTANKVFRLGDTLTFNYVGG 62
RAL L ++ + VA+ V VGD GWT F W A K FR GD L F Y
Sbjct: 10 RALVLGVVLVFLVFNCEVAESVVYTVGDGGGWT--FGTSGWPAGKTFRAGDVLVFKYNPA 67
Query: 63 KDNVVRVNGSDFKSCSVPLTAPVLTSGQDKIIITTYGRRWYISSVTDHCENGQKLFIT 120
NVV V +KSC+ + V SG D+I ++ G ++I SV HC+ G K+ +T
Sbjct: 68 VHNVVSVPAGGYKSCTASPGSRVFKSGDDRITLSR-GTNYFICSVPGHCQGGLKIAVT 124
>BABL_CUCSA (P00303) Basic blue protein (Cusacyanin) (Plantacyanin)
(CBP)
Length = 96
Score = 73.9 bits (180), Expect = 2e-13
Identities = 38/94 (40%), Positives = 55/94 (58%), Gaps = 3/94 (3%)
Query: 26 FVVGDEKGWTTLFDYQTWTANKVFRLGDTLTFNYVGGKDNVVRVNGSDFKSCSVPLTAPV 85
+VVG GWT F+ ++W K FR GD L FNY NVV VN F +C+ P A V
Sbjct: 3 YVVGGSGGWT--FNTESWPKGKRFRAGDILLFNYNPXMHNVVVVNQGGFSTCNTPAGAKV 60
Query: 86 LTSGQDKIIITTYGRRWYISSVTDHCENGQKLFI 119
TSG+D+I + G+ ++I + HC++G K+ +
Sbjct: 61 YTSGRDQIKLPK-GQSYFICNFPGHCQSGMKIAV 93
>BCB2_ARATH (O80517) Uclacyanin II precursor (Blue copper-binding
protein II) (BCB II) (Phytocyanin 2)
Length = 202
Score = 72.8 bits (177), Expect = 4e-13
Identities = 50/163 (30%), Positives = 70/163 (42%), Gaps = 10/163 (6%)
Query: 1 MALSRALFLFALIASIFSTMAVAKDFVVGDEKGWTTLFDYQTWTANKVFRLGDTLTFNYV 60
MA++ A L ++ + +AV WTT DY W K FR+GD L F Y
Sbjct: 9 MAVAAATALLLVLTIVPGAVAVTYTIE------WTTGVDYSGWATGKTFRVGDILEFKY- 61
Query: 61 GGKDNVVRVNGSDFKSCSVPLTAPVLTSGQDKIIITTYGRRWYISSVTDHC--ENGQKLF 118
G V V+ + + C + + G KI + T G ++I S HC G KL
Sbjct: 62 GSSHTVDVVDKAGYDGCDASSSTENHSDGDTKIDLKTVGINYFICSTPGHCRTNGGMKLA 121
Query: 119 ITVQPKQDGWSPVPSPSPSPSLDLVTPEAPPS-NAPWPASSVP 160
+ V G P+P S TPE+PPS +P P + P
Sbjct: 122 VNVVAGSAGPPATPTPPSSTPGTPTTPESPPSGGSPTPTTPTP 164
>STEL_RHUVE (P00302) Stellacyanin
Length = 107
Score = 70.9 bits (172), Expect = 1e-12
Identities = 36/101 (35%), Positives = 53/101 (51%), Gaps = 5/101 (4%)
Query: 26 FVVGDEKGWTTLF----DYQ-TWTANKVFRLGDTLTFNYVGGKDNVVRVNGSDFKSCSVP 80
+ VGD GW F DY W +NK F +GD L F Y NV +V +++SC+
Sbjct: 3 YTVGDSAGWKVPFFGDVDYDWKWASNKTFHIGDVLVFKYDRRFHNVDKVTQKNYQSCNDT 62
Query: 81 LTAPVLTSGQDKIIITTYGRRWYISSVTDHCENGQKLFITV 121
+G B+I + T G+++YI V HC+ GQK+ I V
Sbjct: 63 TPIASYNTGBBRINLKTVGQKYYICGVPKHCDLGQKVHINV 103
>N552_SOYBN (Q02917) Early nodulin 55-2 precursor (N-55-2)
(Nodulin-315)
Length = 187
Score = 70.5 bits (171), Expect = 2e-12
Identities = 50/152 (32%), Positives = 75/152 (48%), Gaps = 11/152 (7%)
Query: 8 FLFALIASIFSTMAVAKDFVVG-DEKGWTTLFD----YQTWTANKVFRLGDTLTFNYVGG 62
FL L + + + A+ +VVG EK W W + F++GDTL F Y
Sbjct: 11 FLVMLAMCLLISTSEAEKYVVGGSEKSWKFPLSKPDSLSHWANSHRFKIGDTLIFKYEKR 70
Query: 63 KDNVVRVNGSDFKSCS-VPLTAPVLTSGQDKIIITTYGRRWYISSVTDHCENGQKLFITV 121
++V N +D++ C+ V V G K+++T G R +IS HC+ G KL + V
Sbjct: 71 TESVHEGNETDYEGCNTVGKYHIVFNGGNTKVMLTKPGFRHFISGNQSHCQMGLKLAVLV 130
Query: 122 ----QPKQDGWSPVPSPSPSPSLDLVTPEAPP 149
+ K++ SP PSPSP PS L++P P
Sbjct: 131 ISSNKTKKNLLSPSPSPSPPPS-SLLSPSPSP 161
>BABL_ARATH (Q8LG89) Putative basic blue protein precursor
(Plantacyanin)
Length = 129
Score = 70.1 bits (170), Expect = 2e-12
Identities = 36/98 (36%), Positives = 54/98 (54%), Gaps = 3/98 (3%)
Query: 23 AKDFVVGDEKGWTTLFDYQTWTANKVFRLGDTLTFNYVGGKDNVVRVNGSDFKSCSVPLT 82
A + VGD WT F+ W K FR GD L FNY NVV+V+ + +C P
Sbjct: 33 AATYTVGDSGIWT--FNAVGWPKGKHFRAGDVLVFNYNPRMHNVVKVDSGSYNNCKTPTG 90
Query: 83 APVLTSGQDKIIITTYGRRWYISSVTDHCENGQKLFIT 120
A TSG+D+I ++ G+ ++I + +HCE+ K+ +T
Sbjct: 91 AKPYTSGKDRITLSK-GQNFFICNFPNHCESDMKIAVT 127
>UMEC_ARMRU (P42849) Umecyanin (UMC)
Length = 115
Score = 67.8 bits (164), Expect = 1e-11
Identities = 37/101 (36%), Positives = 52/101 (50%), Gaps = 3/101 (2%)
Query: 24 KDFVVGDEKGWTTLFD---YQTWTANKVFRLGDTLTFNYVGGKDNVVRVNGSDFKSCSVP 80
+D+ VG + W D Y TW K FR+GD L F++ G +V V F +C
Sbjct: 1 EDYDVGGDMEWKRPSDPKFYITWATGKTFRVGDELEFDFAAGMHDVAVVTKDAFDNCKKE 60
Query: 81 LTAPVLTSGQDKIIITTYGRRWYISSVTDHCENGQKLFITV 121
+T+ KI++ T G ++YI +V DHC GQKL I V
Sbjct: 61 NPISHMTTPPVKIMLNTTGPQYYICTVGDHCRVGQKLSINV 101
>ENL3_ARATH (Q8LC95) Early nodulin-like protein 3 precursor
(Phytocyanin-like protein)
Length = 186
Score = 66.2 bits (160), Expect = 4e-11
Identities = 49/173 (28%), Positives = 83/173 (47%), Gaps = 13/173 (7%)
Query: 1 MALSRALFLFALIASIFSTMAVAKDFVVGDE-KGW----TTLFDYQTWTANKVFRLGDTL 55
MA + F LI + + + +K+ +VG + W + W + FR+GDTL
Sbjct: 1 MAQRTLVATFFLIFFLLTNLVCSKEIIVGGKTSSWKIPSSPSESLNKWAESLRFRVGDTL 60
Query: 56 TFNYVGGKDNVVRVNGSDFKSCSVPLTAPVLTSGQDKIIITTYGRRWYISSVTDHCENGQ 115
+ Y KD+V++V + +C+ A ++G K+ + G ++IS +C G+
Sbjct: 61 VWKYDEEKDSVLQVTKDAYINCNTTNPAANYSNGDTKVKLERSGPYFFISGSKSNCVEGE 120
Query: 116 KLFITVQPKQDGWS------PVPSPSPSPSLDLVTPEAPPSNAPWPASSVPRR 162
KL I V + G + PSP+PSP+L L P P++ ASS+ R+
Sbjct: 121 KLHIVVMSSRGGHTGGFFTGSSPSPAPSPAL-LGAPTVAPASG-GSASSLTRQ 171
>CPC_CUCSA (P29602) Cucumber peeling cupredoxin (CPC) (Stellacyanin)
Length = 137
Score = 66.2 bits (160), Expect = 4e-11
Identities = 44/138 (31%), Positives = 63/138 (44%), Gaps = 18/138 (13%)
Query: 27 VVGDEKGWTTLFD---YQTWTANKVFRLGDTLTFNYVGGKDNVVRVNGSD-FKSCS---- 78
+VGD GW+ Y W A K FR+GD+L FN+ NV + F +C+
Sbjct: 6 IVGDNTGWSVPSSPNFYSQWAAGKTFRVGDSLQFNFPANAHNVHEMETKQSFDACNFVNS 65
Query: 79 ---VPLTAPVLTSGQDKIIITTYGRRWYISSVTDHCENGQKLFITVQPKQDGWSPVPSPS 135
V T+PV+ + G +++ +V HC NGQKL I V S +P PS
Sbjct: 66 DNDVERTSPVIER------LDELGMHYFVCTVGTHCSNGQKLSINVVAANATVS-MPPPS 118
Query: 136 PSPSLDLVTPEAPPSNAP 153
SP ++ P P +P
Sbjct: 119 SSPPSSVMPPPVMPPPSP 136
>NO20_MEDTR (P93329) Early nodulin 20 precursor (N-20)
Length = 268
Score = 64.7 bits (156), Expect = 1e-10
Identities = 48/169 (28%), Positives = 69/169 (40%), Gaps = 6/169 (3%)
Query: 4 SRALFLFALIASIFSTMAVAKDFVVGD-EKGWT----TLFDYQTWTANKVFRLGDTLTFN 58
S L +F + + + + D++VGD E W T W +N F +GDT+TF
Sbjct: 5 SPILLMFIFSIWMLISYSESTDYLVGDSENSWKFPLPTRHALTRWASNYQFIVGDTITFQ 64
Query: 59 YVGGKDNVVRVNGSDFKSCSVPLTAPVLTSGQDKIIITTYGRRWYISSVTDHCENGQKLF 118
Y ++V V D+ C + G +++ G +IS HC G KL
Sbjct: 65 YNNKTESVHEVEEEDYDRCGIRGEHVDHYDGNTMVVLKKTGIHHFISGKKRHCRLGLKLA 124
Query: 119 ITVQPKQDGWSPVPSPS-PSPSLDLVTPEAPPSNAPWPASSVPRRSLLP 166
+ V SP P PS P+P P P + P P S P S P
Sbjct: 125 VVVMVAPVLSSPPPPPSPPTPRSSTPIPHPPRRSLPSPPSPSPSPSPSP 173
>NO16_MEDTR (P93328) Early nodulin 16 precursor (N-16)
Length = 180
Score = 58.5 bits (140), Expect = 8e-09
Identities = 42/152 (27%), Positives = 66/152 (42%), Gaps = 13/152 (8%)
Query: 1 MALSRALFLFALIAS-IFSTMAVAKDFVVGDE-KGWTTLFD----YQTWTANKVFRLGDT 54
MA S + L + + + + + + D+++GD W + W + F +GDT
Sbjct: 1 MASSSPILLMIIFSMWLLISHSESTDYLIGDSHNSWKVPLPSRRAFARWASAHEFTVGDT 60
Query: 55 LTFNYVGGKDNVVRVNGSDFKSCSVPLTAPVLTSGQDKIIITTYGRRWYISSVTDHCENG 114
+ F Y ++V VN D+ C G K+++ G +IS HC+ G
Sbjct: 61 ILFEYDNETESVHEVNEHDYIMCHTNGEHVEHHDGNTKVVLDKIGVYHFISGTKRHCKMG 120
Query: 115 QKLFITVQPKQDGWSP-------VPSPSPSPS 139
KL + VQ K D P PSPSPSP+
Sbjct: 121 LKLAVVVQNKHDLVLPPLITMPMPPSPSPSPN 152
>N551_SOYBN (Q05544) Early nodulin 55-1 (N-55-1) (Fragment)
Length = 137
Score = 58.2 bits (139), Expect = 1e-08
Identities = 35/104 (33%), Positives = 51/104 (48%), Gaps = 1/104 (0%)
Query: 64 DNVVRVNGSDFKSCSVPLTAPVL-TSGQDKIIITTYGRRWYISSVTDHCENGQKLFITVQ 122
++V VN +D++ C+ VL G K+++T G R +IS HC+ G KL + V
Sbjct: 7 ESVHEVNETDYEQCNTVGKEHVLFNDGNTKVMLTKSGFRHFISGNQSHCQMGLKLMVVVM 66
Query: 123 PKQDGWSPVPSPSPSPSLDLVTPEAPPSNAPWPASSVPRRSLLP 166
+ SPSPS +P PS +P P+ S P S LP
Sbjct: 67 SNNTKKKLIHSPSPSSPSPSPSPSPSPSPSPSPSLSSPSPSPLP 110
>PSL1_HUMAN (Q8TCT7) Signal peptide peptidase-like 2B (EC 3.4.99.-)
(SPP-like 2B protein) (SPPL2b protein) (Intramembrane
protease 4) (IMP4) (Presenilin-like protein 1)
Length = 564
Score = 37.7 bits (86), Expect = 0.014
Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 6/40 (15%)
Query: 128 WSPVPSPSPSPSLDLVTPEAP------PSNAPWPASSVPR 161
W+P P+ P P D TP +P P+ +PWPA P+
Sbjct: 485 WAPAPADGPQPPKDSATPLSPQPPSEEPATSPWPAEQSPK 524
>NCO3_MOUSE (O09000) Nuclear receptor coactivator 3 (EC 2.3.1.48)
(NCoA-3) (Thyroid hormone receptor activator molecule 1)
(TRAM-1) (ACTR) (Receptor-associated coactivator 3)
(RAC-3) (Amplified in breast cancer-1 protein homolog)
(AIB-1) (Steroid receptor
Length = 1398
Score = 37.4 bits (85), Expect = 0.018
Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 5/56 (8%)
Query: 107 VTDHCENGQKLFITVQPKQDGWSPVPSPSPSPSLDLV-----TPEAPPSNAPWPAS 157
++ H + + + QP+ +SP P+ + SPS+D V P+APP P+PA+
Sbjct: 1233 MSHHLQQQRMAMMMSQPQPQAFSPPPNVTASPSMDGVLAGSAMPQAPPQQFPYPAN 1288
>NUSA_MYCPN (P75591) Transcription elongation protein nusA
Length = 540
Score = 37.0 bits (84), Expect = 0.023
Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
Query: 115 QKLFITVQPKQDGWSPVPSPSPSPSLDLVTPEAPPSNA---PWPASSVPRRSLLPKKLFQ 171
Q+L + PK +P P+P P+P+ V P PP + P P + P+ + PK +F
Sbjct: 447 QELNLEATPKVAAPTPTPAPQPTPAPTKVEPVPPPVSVTPKPIPKVNKPKPVVKPKSVFS 506
Query: 172 I 172
I
Sbjct: 507 I 507
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.319 0.135 0.422
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,954,966
Number of Sequences: 164201
Number of extensions: 1040419
Number of successful extensions: 5740
Number of sequences better than 10.0: 115
Number of HSP's better than 10.0 without gapping: 58
Number of HSP's successfully gapped in prelim test: 59
Number of HSP's that attempted gapping in prelim test: 5155
Number of HSP's gapped (non-prelim): 446
length of query: 176
length of database: 59,974,054
effective HSP length: 103
effective length of query: 73
effective length of database: 43,061,351
effective search space: 3143478623
effective search space used: 3143478623
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)
Medicago: description of AC126009.11