BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC126007.11 + phase: 0
(525 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
JD1C_HUMAN (P41229) Jumonji/ARID domain-containing protein 1C (S... 40 0.019
CHD4_MOUSE (Q6PDQ2) Chromodomain helicase-DNA-binding protein 4 ... 39 0.025
PHFE_MOUSE (Q9D4H9) PHD finger protein 14 39 0.033
PHFE_HUMAN (O94880) PHD finger protein 14 39 0.033
CHD3_CAEEL (Q22516) Chromodomain helicase-DNA-binding protein 3 ... 39 0.033
SON_MOUSE (Q9QX47) SON protein 38 0.056
SON_HUMAN (P18583) SON protein (SON3) (Negative regulatory eleme... 38 0.056
JD1C_MOUSE (P41230) Jumonji/ARID domain-containing protein 1C (S... 38 0.074
CHD4_HUMAN (Q14839) Chromodomain helicase-DNA-binding protein 4 ... 38 0.074
VGNB_CPMV (P03600) Genome polyprotein B [Contains: Protease cofa... 37 0.096
BRF1_HUMAN (P55201) Peregrin (Bromodomain and PHD finger-contain... 37 0.13
GLYB_PLAFG (P02895) Glycophorin-binding protein precursor (GBP-130) 37 0.16
BA2A_MOUSE (Q91YE5) Bromodomain adjacent to zinc finger domain 2... 37 0.16
BA1A_XENLA (Q8UVR5) ATP-utilizing chromatin assembly and remodel... 37 0.16
REQU_MOUSE (Q61103) Zinc-finger protein ubi-d4 (Requiem) (Apopto... 36 0.21
REF2_YEAST (P42073) RNA end formation protein 2 36 0.21
YN62_ARCFU (O30308) Hypothetical protein AF2362 36 0.28
YJ89_YEAST (P47156) Hypothetical 85.0 kDa protein in STE24-ATP2 ... 36 0.28
BA2A_HUMAN (Q9UIF9) Bromodomain adjacent to zinc finger domain 2... 36 0.28
REQU_HUMAN (Q92785) Zinc-finger protein ubi-d4 (Requiem) (Apopto... 35 0.37
>JD1C_HUMAN (P41229) Jumonji/ARID domain-containing protein 1C (SmcX
protein) (Xe169 protein)
Length = 1560
Score = 39.7 bits (91), Expect = 0.019
Identities = 40/180 (22%), Positives = 68/180 (37%), Gaps = 33/180 (18%)
Query: 101 EEVSPSKFEAHAGWASRRKPWP---------------LIIEFLFPIVMNTAVSANKEPVE 145
+ V PSKF ++ A R +P P L I P +M + A + +
Sbjct: 199 QSVQPSKFNSYGRRAKRLQPDPEPTEEDIEKNPELKKLQIYGAGPKMMGLGLMAKDKTLR 258
Query: 146 SPPKEKWYCE---YCRNKLQKDKNVEHKENVVTTQKIIESDPSEQIAKICTLSVKHKE-- 200
KE C + +L D VE + E S + T+ ++
Sbjct: 259 KKDKEGPECPPTVVVKEELGGDVKVESTSPKTFLESKEELSHSPEPCTKMTMRLRRNHSN 318
Query: 201 ---VEHSSCALCSERHFNNGEFSPWTVMICDQCEKDYHVGCLKDHNMANLKKVPKHYWFC 257
+E C +CS ++ +++CD C+ +YH+ CL + L ++PK W C
Sbjct: 319 AQFIESYVCRMCSRGDEDD------KLLLCDGCDDNYHIFCL----LPPLPEIPKGVWRC 368
>CHD4_MOUSE (Q6PDQ2) Chromodomain helicase-DNA-binding protein 4
(CHD-4)
Length = 1915
Score = 39.3 bits (90), Expect = 0.025
Identities = 31/117 (26%), Positives = 48/117 (40%), Gaps = 30/117 (25%)
Query: 144 VESPPKEKWYCEYCRNKLQKDKNVEHKENVVTTQKIIES---DPSEQIAKICTLSVKHKE 200
+E P+ KW C +C ++ E KE+ ++I+E DP E+ H E
Sbjct: 394 MEKAPEGKWSCPHCE---KEGIQWEAKEDNSEGEEILEEVGGDPEEE-------DDHHME 443
Query: 201 VEHSSCALCSERHFNNGEFSPWTVMICDQCEKDYHVGCLKDHNMANLKKVPKHYWFC 257
C +C + GE ++ CD C YH+ CL L ++P W C
Sbjct: 444 F----CRVCKD----GGE-----LLCCDTCPSSYHIHCLN----PPLPEIPNGEWLC 483
Score = 32.0 bits (71), Expect = 4.0
Identities = 17/59 (28%), Positives = 29/59 (48%), Gaps = 14/59 (23%)
Query: 200 EVEHSS-CALCSERHFNNGEFSPWTVMICDQCEKDYHVGCLKDHNMANLKKVPKHYWFC 257
E +H C +C + GE +++CD C + YH+ CL +++K P+ W C
Sbjct: 359 ETDHQDYCEVCQQ----GGE-----IILCDTCPRAYHMVCLD----PDMEKAPEGKWSC 404
>PHFE_MOUSE (Q9D4H9) PHD finger protein 14
Length = 881
Score = 38.9 bits (89), Expect = 0.033
Identities = 16/53 (30%), Positives = 25/53 (46%), Gaps = 6/53 (11%)
Query: 205 SCALCSERHFNNGEFSPWTVMICDQCEKDYHVGCLKDHNMANLKKVPKHYWFC 257
SC +C + H + +++CD C+ YH+GCL +K YW C
Sbjct: 720 SCGICKKNHDQH------LLLLCDTCKLHYHLGCLDPPLTRMPRKTKNSYWQC 766
>PHFE_HUMAN (O94880) PHD finger protein 14
Length = 888
Score = 38.9 bits (89), Expect = 0.033
Identities = 16/53 (30%), Positives = 25/53 (46%), Gaps = 6/53 (11%)
Query: 205 SCALCSERHFNNGEFSPWTVMICDQCEKDYHVGCLKDHNMANLKKVPKHYWFC 257
SC +C + H + +++CD C+ YH+GCL +K YW C
Sbjct: 727 SCGICKKNHDQH------LLLLCDTCKLHYHLGCLDPPLTRMPRKTKNSYWQC 773
>CHD3_CAEEL (Q22516) Chromodomain helicase-DNA-binding protein 3
homolog (CHD-3)
Length = 1787
Score = 38.9 bits (89), Expect = 0.033
Identities = 27/121 (22%), Positives = 45/121 (36%), Gaps = 40/121 (33%)
Query: 137 VSANKEPVESPPKEKWYCEYCRNKLQKDKNVEHKENVVTTQKIIESDPSEQIAKICTLSV 196
V+ E +E PP+ W C +C EH +V+ I+E +P++
Sbjct: 289 VACIDENMEQPPEGDWSCPHCE---------EHGPDVL----IVEEEPAK---------- 325
Query: 197 KHKEVEHSSCALCSERHFNNGEFSPWTVMICDQCEKDYHVGCLKDHNMANLKKVPKHYWF 256
C +C E +++CD C YH C+ L ++P+ W
Sbjct: 326 ----ANMDYCRICKETS---------NILLCDTCPSSYHAYCID----PPLTEIPEGEWS 368
Query: 257 C 257
C
Sbjct: 369 C 369
Score = 35.8 bits (81), Expect = 0.28
Identities = 17/59 (28%), Positives = 32/59 (53%), Gaps = 13/59 (22%)
Query: 199 KEVEHSSCALCSERHFNNGEFSPWTVMICDQCEKDYHVGCLKDHNMANLKKVPKHYWFC 257
+E +C +C++ +GE +M+CD C + YHV C+ + N+++ P+ W C
Sbjct: 261 EENHQENCEVCNQ----DGE-----LMLCDTCTRAYHVACIDE----NMEQPPEGDWSC 306
>SON_MOUSE (Q9QX47) SON protein
Length = 2404
Score = 38.1 bits (87), Expect = 0.056
Identities = 20/64 (31%), Positives = 33/64 (51%)
Query: 4 SHEELKDNIVVEAVAKDGDDVEKKMKNKKKKKNKNKKESNLRSNESKNLQPSPKHTTQTS 63
S E KD+ + KD + KK KN+ K + + K++S+LRS ++ K +TS
Sbjct: 1767 SSSEEKDDYEIFVKVKDTHEKSKKNKNRDKGEKEKKRDSSLRSRSKRSKSSEHKSRKRTS 1826
Query: 64 NSHA 67
S +
Sbjct: 1827 ESRS 1830
>SON_HUMAN (P18583) SON protein (SON3) (Negative regulatory
element-binding protein) (NRE-binding protein) (DBP-5)
(Bax antagonist selected in saccharomyces 1) (BASS1)
Length = 2426
Score = 38.1 bits (87), Expect = 0.056
Identities = 20/64 (31%), Positives = 33/64 (51%)
Query: 4 SHEELKDNIVVEAVAKDGDDVEKKMKNKKKKKNKNKKESNLRSNESKNLQPSPKHTTQTS 63
S E KD+ + KD + KK KN+ K + + K++S+LRS ++ K +TS
Sbjct: 1782 SSSEEKDDYEIFVKVKDTHEKSKKNKNRDKGEKEKKRDSSLRSRSKRSKSSEHKSRKRTS 1841
Query: 64 NSHA 67
S +
Sbjct: 1842 ESRS 1845
Score = 30.8 bits (68), Expect = 9.0
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Query: 16 AVAKDGDDVEKKMKNKKKKKNKNKKESNLRSNESKNLQPSPKHTTQTSNSH 66
+V D D K+KK KK+KNKK+ + E K + P+ + + SH
Sbjct: 94 SVQTDPTDEIPTKKSKKHKKHKNKKKKKKKEKE-KKYKRQPEESESKTKSH 143
>JD1C_MOUSE (P41230) Jumonji/ARID domain-containing protein 1C (SmcX
protein) (Xe169 protein)
Length = 1554
Score = 37.7 bits (86), Expect = 0.074
Identities = 39/180 (21%), Positives = 68/180 (37%), Gaps = 33/180 (18%)
Query: 101 EEVSPSKFEAHAGWASRRKPWP---------------LIIEFLFPIVMNTAVSANKEPVE 145
+ V PSKF ++ A R +P P L I P +M + A + +
Sbjct: 199 QSVQPSKFNSYGRRAKRLQPDPEPTEEDIEKNPELKKLQIYGAGPKMMGLGLMAKDKTLR 258
Query: 146 SPPKEKWYCE---YCRNKLQKDKNVEHKENVVTTQKIIESDPSEQIAKICTLSVKHKE-- 200
KE C + +L D +E + E S + T+ ++
Sbjct: 259 KKDKEGPECPPTVVVKEELGGDVKMESTSPKTFLEGKEELSHSPEPCTKMTMRLRRNHSN 318
Query: 201 ---VEHSSCALCSERHFNNGEFSPWTVMICDQCEKDYHVGCLKDHNMANLKKVPKHYWFC 257
+E C +CS ++ +++CD C+ +YH+ CL + L ++PK W C
Sbjct: 319 AQFIESYVCRMCSRGDEDD------KLLLCDGCDDNYHIFCL----LPPLPEIPKGVWRC 368
>CHD4_HUMAN (Q14839) Chromodomain helicase-DNA-binding protein 4
(CHD-4) (Mi-2 autoantigen 218 kDa protein) (Mi2-beta)
Length = 1912
Score = 37.7 bits (86), Expect = 0.074
Identities = 26/114 (22%), Positives = 43/114 (36%), Gaps = 24/114 (21%)
Query: 144 VESPPKEKWYCEYCRNKLQKDKNVEHKENVVTTQKIIESDPSEQIAKICTLSVKHKEVEH 203
+E P+ KW C +C KE + K S+ E + ++ + +
Sbjct: 401 MEKAPEGKWSCPHCE-----------KEGIQWEAKEDNSEGEEILEEVGGDLEEEDDHHM 449
Query: 204 SSCALCSERHFNNGEFSPWTVMICDQCEKDYHVGCLKDHNMANLKKVPKHYWFC 257
C +C + GE ++ CD C YH+ CL L ++P W C
Sbjct: 450 EFCRVCKD----GGE-----LLCCDTCPSSYHIHCLN----PPLPEIPNGEWLC 490
Score = 32.0 bits (71), Expect = 4.0
Identities = 17/59 (28%), Positives = 29/59 (48%), Gaps = 14/59 (23%)
Query: 200 EVEHSS-CALCSERHFNNGEFSPWTVMICDQCEKDYHVGCLKDHNMANLKKVPKHYWFC 257
E +H C +C + GE +++CD C + YH+ CL +++K P+ W C
Sbjct: 366 ETDHQDYCEVCQQ----GGE-----IILCDTCPRAYHMVCLD----PDMEKAPEGKWSC 411
>VGNB_CPMV (P03600) Genome polyprotein B [Contains: Protease
cofactor; Membrane-binding protein; Viral genome-linked
protein (VPg); Protease (EC 3.4.22.-); RNA-directed RNA
polymerase (EC 2.7.7.48)]
Length = 1866
Score = 37.4 bits (85), Expect = 0.096
Identities = 40/164 (24%), Positives = 71/164 (42%), Gaps = 18/164 (10%)
Query: 348 IPAMVKGRKIKDKYYFGGMYCAVLIVNQVVVSAGIFRVFGKEVAELSLIATKAEYQKQGF 407
+P+ K +++ + G YC LI + V+ FG+ V ++ +E G
Sbjct: 716 LPSEAKEKRVLYSIPYNGEYCNALIDDNYNVTCW----FGECVGNPEQLSKYSEKMLLGA 771
Query: 408 FKCLLSCIE--NVLKELKVERLVLPAAHEAESMWIDKFGFTEPNQGLGRRYYRRSWSFHL 465
++ LL C E NV+ + ++ +V P ++ E +I K G T YY ++
Sbjct: 772 YEFLL-CSESLNVVIQAHLKEMVCPHHYDKELNFIGKIGET---------YYHNQMVSNI 821
Query: 466 NKGVEQNTHLTYVHALYLMYRKEIDSCFRHKKFAIQKFALYLMY 509
G Q H + + ++ KE + + + A K ALY MY
Sbjct: 822 --GSMQKWHRAILFGIGVLLGKEKEKTWYQVQVANVKQALYDMY 863
>BRF1_HUMAN (P55201) Peregrin (Bromodomain and PHD finger-containing
protein 1) (BR140 protein)
Length = 1214
Score = 37.0 bits (84), Expect = 0.13
Identities = 42/244 (17%), Positives = 93/244 (37%), Gaps = 42/244 (17%)
Query: 14 VEAVAKDGDDVEKKMKNKKKKKNKNKKESNLRSNESKNLQPSPKHTTQTSNSHASPTTIN 73
++ V++D + E+ +N K+N + +S + KN + K + + + S +T
Sbjct: 116 LDVVSEDEEAPEEAPENGSNKENTETPAATPKSGKHKNKEKR-KDSNHHHHHNVSASTTP 174
Query: 74 YRDQCLHKLVFQENVLEDGAAVGYFVYEEVSPSKFEAHAGWASRRKPWPLIIEFLFPIVM 133
+ +++ + Q+ Y+ Y E S + + + + ++++ +M
Sbjct: 175 KLPEVVYRELEQDTPDAPPRPTSYYRYIEKSAEELDEEVEYDMDEE------DYIWLDIM 228
Query: 134 NTAVSANKEPVESPPKEKWYCEYCRNKLQKDKNVEHKENVVTTQKIIESDPSEQIAKICT 193
N E V P+E + EY ++L+K+ E + DP+ +
Sbjct: 229 NER--RKTEGVSPIPQEIF--EYLMDRLEKESYFESHN---------KGDPNALVD---- 271
Query: 194 LSVKHKEVEHSSCALCSERHFNNGEFSPWTVMICDQCEKDYHVGCLKDHNMANLKKVPKH 253
E + C +C++ N ++ CD C + H C + +P+
Sbjct: 272 --------EDAVCCICNDGECQNSN----VILFCDMCNLEVHQECY------GVPYIPEG 313
Query: 254 YWFC 257
W C
Sbjct: 314 QWLC 317
>GLYB_PLAFG (P02895) Glycophorin-binding protein precursor (GBP-130)
Length = 774
Score = 36.6 bits (83), Expect = 0.16
Identities = 34/176 (19%), Positives = 74/176 (41%), Gaps = 22/176 (12%)
Query: 19 KDGDDVEKKMKNKKKKKNKNKKESNLRSNE-SKNLQPSPKHTTQTSNSHASPTTINYRDQ 77
K+G +V+K +K +KKK+ K E N +NE SK +P +Q + T+ ++
Sbjct: 160 KEGKNVKKVIKKEKKKEESGKPEENKHANEASKKKEPKASKVSQKPS-----TSTRSNNE 214
Query: 78 CLHKLVFQENVLEDGAAVGYFVYEEVSPSKFEAHAGWASRRKPWPLIIEFLFPIVMNTAV 137
+ + L G + E + ++ H +E + I+ NT
Sbjct: 215 VKIRAASNQETLTSADPEGQIMREYAADPEYRKH-------------LEIFYKILTNTDP 261
Query: 138 SANKEPVESPPKEKWYCEYCRNKLQKD--KNVEHKENVVTTQKII-ESDPSEQIAK 190
+ E + KE ++ ++ + E+++++ KI+ +DP++ + +
Sbjct: 262 NDEVERRNADNKEDLTSADPEGQIMREYASDPEYRKHLEIFYKILTNTDPNDDVER 317
>BA2A_MOUSE (Q91YE5) Bromodomain adjacent to zinc finger domain 2A
(Transcription termination factor-I interacting protein
5) (TTF-I interacting protein 5) (Tip5)
Length = 1850
Score = 36.6 bits (83), Expect = 0.16
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 10/61 (16%)
Query: 199 KEVEHSSCALCSERHFNNGEFSPWTVMICDQCEKDYHVGCLKDHNMANLKKVPKHYWFCG 258
K V +C +C R +N EF +++CD C++ H+ C + ++ VP+ WFC
Sbjct: 1619 KSVNKVTCLVC--RKGDNDEF----LLLCDGCDRGCHIYC----HRPKMEAVPEGDWFCA 1668
Query: 259 V 259
V
Sbjct: 1669 V 1669
>BA1A_XENLA (Q8UVR5) ATP-utilizing chromatin assembly and remodely
factor 1 (xACF1) (Fragment)
Length = 627
Score = 36.6 bits (83), Expect = 0.16
Identities = 16/59 (27%), Positives = 35/59 (59%), Gaps = 10/59 (16%)
Query: 199 KEVEHSSCALCSERHFNNGEFSPWTVMICDQCEKDYHVGCLKDHNMANLKKVPKHYWFC 257
+ + ++ C +C ++ +GE ++++CD C++ +H+ C++ LK VP+ WFC
Sbjct: 218 RSILNARCKVCRKK--GDGE----SMVLCDGCDRGHHIYCVR----PKLKYVPEGDWFC 266
>REQU_MOUSE (Q61103) Zinc-finger protein ubi-d4 (Requiem) (Apoptosis
response zinc finger protein) (D4, zinc and double PHD
fingers family 2)
Length = 391
Score = 36.2 bits (82), Expect = 0.21
Identities = 26/117 (22%), Positives = 48/117 (40%), Gaps = 16/117 (13%)
Query: 153 YCEYCRNKLQKDKNVEHKENVVTTQKIIESDPSE--QIAKICTLSVKHKE---VEHSSCA 207
YC++C + +K E +V+ S Q + +VK +E C
Sbjct: 272 YCDFCLGDSKINKKTGQPEELVSCSDCGRSGHPSCLQFTPVMMAAVKTYRWQCIECKCCN 331
Query: 208 LCSERHFNNGEFSPWTVMICDQCEKDYHVGCLKDHNMANLKKVPKHYWFCGVDCYDI 264
LC ++ ++ CD C++ YH+ CL ++ + P+ W C + C D+
Sbjct: 332 LCGTSENDD------QLLFCDDCDRGYHMYCL----TPSMSEPPEGSWSCHL-CLDL 377
>REF2_YEAST (P42073) RNA end formation protein 2
Length = 533
Score = 36.2 bits (82), Expect = 0.21
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 9/88 (10%)
Query: 15 EAVAKDGDDVEKKMKNKKKKKNKNK-KESNLRSNESKNLQPSPKHTTQTS--------NS 65
+A KD + ++K K+K K K K K K S L +N+ KN PSP +T + N
Sbjct: 204 KAKIKDSEKEKEKEKDKSKVKMKTKLKPSPLLNNDDKNSSPSPTASTSSMKKLKSGLFNK 263
Query: 66 HASPTTINYRDQCLHKLVFQENVLEDGA 93
+ + +T + KL F + + +D A
Sbjct: 264 NEAKSTESLPTSSKKKLSFSKYLNKDDA 291
Score = 32.3 bits (72), Expect = 3.1
Identities = 22/82 (26%), Positives = 40/82 (47%), Gaps = 2/82 (2%)
Query: 27 KMKNKKKKKNKNKKESNLRSNESKNLQPSPKHTTQTSNSHASPTTINYRDQCLHKLVFQE 86
K+K+ +K+K K K +S ++ L+PSP NS SPT + L +F +
Sbjct: 206 KIKDSEKEKEKEKDKSKVKMKTK--LKPSPLLNNDDKNSSPSPTASTSSMKKLKSGLFNK 263
Query: 87 NVLEDGAAVGYFVYEEVSPSKF 108
N + ++ +++S SK+
Sbjct: 264 NEAKSTESLPTSSKKKLSFSKY 285
>YN62_ARCFU (O30308) Hypothetical protein AF2362
Length = 161
Score = 35.8 bits (81), Expect = 0.28
Identities = 26/102 (25%), Positives = 45/102 (43%), Gaps = 3/102 (2%)
Query: 388 KEVAELSLIATKAEYQKQG-FFKCLLSCIENVLKELK--VERLVLPAAHEAESMWIDKFG 444
KE+ + L+ +K G F + + EL + +VLP +E E ++ +
Sbjct: 11 KELFDADLVERAKNLKKSGNIFNPIFYIFFTRIVELSAIINDMVLPNRYELEELFRTRKD 70
Query: 445 FTEPNQGLGRRYYRRSWSFHLNKGVEQNTHLTYVHALYLMYR 486
F + + G RR+W + +GVE + LYL+YR
Sbjct: 71 FLQIDYGTIGETIRRAWLYERERGVEFTFSNSVEDMLYLLYR 112
>YJ89_YEAST (P47156) Hypothetical 85.0 kDa protein in STE24-ATP2
intergenic region
Length = 728
Score = 35.8 bits (81), Expect = 0.28
Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 10/59 (16%)
Query: 199 KEVEHSSCALCSERHFNNGEFSPWTVMICDQCEKDYHVGCLKDHNMANLKKVPKHYWFC 257
+E + +C +C + + P ++CD C+K +H+ CL L++VP W C
Sbjct: 231 EEDDDDACIVCRKTN------DPKRTILCDSCDKPFHIYCLS----PPLERVPSGDWIC 279
>BA2A_HUMAN (Q9UIF9) Bromodomain adjacent to zinc finger domain 2A
(Transcription termination factor-I interacting protein
5) (TTF-I interacting protein 5) (Tip5) (hWALp3)
Length = 1878
Score = 35.8 bits (81), Expect = 0.28
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 10/61 (16%)
Query: 199 KEVEHSSCALCSERHFNNGEFSPWTVMICDQCEKDYHVGCLKDHNMANLKKVPKHYWFCG 258
K V +C +C R +N EF +++CD C++ H+ C + ++ VP+ WFC
Sbjct: 1645 KSVNKVTCLVC--RKGDNDEF----LLLCDGCDRGCHIYC----HRPKMEAVPEGDWFCT 1694
Query: 259 V 259
V
Sbjct: 1695 V 1695
>REQU_HUMAN (Q92785) Zinc-finger protein ubi-d4 (Requiem) (Apoptosis
response zinc finger protein) (D4, zinc and double PHD
fingers family 2)
Length = 391
Score = 35.4 bits (80), Expect = 0.37
Identities = 24/114 (21%), Positives = 47/114 (41%), Gaps = 10/114 (8%)
Query: 153 YCEYCRNKLQKDKNVEHKENVVTTQKIIESDPSE--QIAKICTLSVKHKEVEHSSCALCS 210
YC++C + +K E +V+ S Q + +VK + C C+
Sbjct: 272 YCDFCLGDSKINKKTGQPEELVSCSDCGRSGHPSCLQFTPVMMAAVKTYRWQCIECKCCN 331
Query: 211 ERHFNNGEFSPWTVMICDQCEKDYHVGCLKDHNMANLKKVPKHYWFCGVDCYDI 264
+ + ++ CD C++ YH+ CL ++ + P+ W C + C D+
Sbjct: 332 ICGTSENDDQ---LLFCDDCDRGYHMYCL----TPSMSEPPEGSWSCHL-CLDL 377
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.319 0.135 0.406
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 63,145,478
Number of Sequences: 164201
Number of extensions: 2729041
Number of successful extensions: 11251
Number of sequences better than 10.0: 85
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 62
Number of HSP's that attempted gapping in prelim test: 10953
Number of HSP's gapped (non-prelim): 262
length of query: 525
length of database: 59,974,054
effective HSP length: 115
effective length of query: 410
effective length of database: 41,090,939
effective search space: 16847284990
effective search space used: 16847284990
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 68 (30.8 bits)
Medicago: description of AC126007.11