BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC126006.11 + phase: 0
(325 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
MYHD_HUMAN (Q9UKX3) Myosin heavy chain, skeletal muscle, extraoc... 44 5e-04
TRDN_CANFA (P82179) Triadin 42 0.002
MYSS_RABIT (P02562) Myosin heavy chain, skeletal muscle (Fragments) 42 0.002
MYH3_HUMAN (P11055) Myosin heavy chain, fast skeletal muscle, em... 42 0.002
MYH6_HUMAN (P13533) Myosin heavy chain, cardiac muscle alpha iso... 41 0.004
MYH3_CHICK (P02565) Myosin heavy chain, fast skeletal muscle, em... 41 0.004
MYH6_RAT (P02563) Myosin heavy chain, cardiac muscle alpha isofo... 41 0.005
MYH6_MOUSE (Q02566) Myosin heavy chain, cardiac muscle alpha iso... 41 0.005
MYSS_CHICK (P13538) Myosin heavy chain, skeletal muscle, adult 40 0.006
SEM1_HUMAN (P04279) Semenogelin I protein precursor (SGI) [Conta... 40 0.008
MYH8_HUMAN (P13535) Myosin heavy chain, skeletal muscle, perinat... 40 0.008
MYH3_RAT (P12847) Myosin heavy chain, fast skeletal muscle, embr... 40 0.008
YATE_SCHPO (Q09779) Hypothetical protein C1D4.14 in chromosome I 40 0.010
NSR1_YEAST (P27476) Nuclear localization sequence binding protei... 39 0.014
RBP2_PLAVB (Q00799) Reticulocyte binding protein 2 precursor (Pv... 39 0.018
MYH1_HUMAN (P12882) Myosin heavy chain, skeletal muscle, adult 1... 39 0.018
BPA1_HUMAN (Q03001) Bullous pemphigoid antigen 1 isoforms 1/2/3/... 39 0.018
BICD_DROME (P16568) Cytoskeleton-like bicaudal D protein 39 0.018
CAC1_YEAST (Q12495) Chromatin assembly factor 1 p90 subunit (CAF... 39 0.023
YFI6_YEAST (P43597) Hypothetical 137.7 kDa protein in UGS1-FAB1 ... 38 0.030
>MYHD_HUMAN (Q9UKX3) Myosin heavy chain, skeletal muscle, extraocular
(MyHC-eo)
Length = 1938
Score = 43.9 bits (102), Expect = 5e-04
Identities = 63/334 (18%), Positives = 139/334 (40%), Gaps = 29/334 (8%)
Query: 4 KIENKDQIQQNQESPRKLQNNIIGSGNERLK-RDEWSEGAVTTLLEAYESKWVLRNRAKL 62
+I+ KD+ Q +Q + + N L R E E ++ L + SK L + +
Sbjct: 1262 EIKAKDEQQTQLIHDLNMQKARLQTQNGELSHRVEEKESLISQLTK---SKQALTQQLEE 1318
Query: 63 KGQDWEDVAKHVSSRSNSTKSPK-----TQTQCKNKIESMKKRYRSES-ASSDVSSWPLY 116
+ E+ K ++ +++ +S + + Q + + E+ + R+ S A+S+V+ W
Sbjct: 1319 LKRQMEEETKAKNAMAHALQSSRHDCDLLREQYEEEQEAKAELQRALSKANSEVAQWKTK 1378
Query: 117 SRLDLLLRGT---------------GQLSTTTLNNNQAGLVLLEPSSLVMSHAQEEVHQP 161
D + R + T T N+ A L E + + E++ +
Sbjct: 1379 YETDAIQRTEELEEAKKKLAQRLQEAEEKTETANSKCASL---EKTKQRLQGEVEDLMRD 1435
Query: 162 LVPPPITTAQNSHGSNGVDKLIKEDEIETKSSDHIANKNPLETDSSTPALYSEKDEQRSK 221
L A DK++ E + + S E+ S + L+ ++
Sbjct: 1436 LERSHTACATLDKKQRNFDKVLAEWKQKLDESQAELEAAQKESRSLSTELFKMRNAYEEV 1495
Query: 222 KRRMRTENNNNKRQKKETMGIAESIRWVAEVVVRSEQTRMETLKEIEKMRVEAEAKRGEM 281
++ T NK ++E + E I + + +E+T+ +E ++V E G +
Sbjct: 1496 VDQLETLRRENKNLQEEISDLTEQIAETGKNLQEAEKTKKLVEQEKSDLQVALEEVEGSL 1555
Query: 282 EIKRTEIIANTQLEIARIFANVNNKDKDKDKDVD 315
E + ++I+ QLE++++ + ++ K +KD++++
Sbjct: 1556 EHEESKIL-RVQLELSQVKSELDRKVIEKDEEIE 1588
>TRDN_CANFA (P82179) Triadin
Length = 700
Score = 42.4 bits (98), Expect = 0.002
Identities = 52/242 (21%), Positives = 95/242 (38%), Gaps = 14/242 (5%)
Query: 49 AYESKWVLRNRAKLKGQDWEDVAKHVSSRSNSTKSPKTQTQCKNKIESMKKRYRSESASS 108
A E + + G+ E K V KS KT T K+K +KK + A
Sbjct: 421 AKEETSAASTKKAVPGKKEEKTTKTVEQEIRKEKSGKTSTASKDKEPEIKKDEKMPKADK 480
Query: 109 DVSSWPLYSRLDLLLRGTGQLSTTTLNNNQAGLVLLEPSSLVMSHAQEEVHQPLVPPPIT 168
+V P S++ + Q+ + +P V SH + E + +V
Sbjct: 481 EVKPKPPQSQVKKEEKSESQVKKEAKPEQD----IAKPEKTV-SHGKPE--EKVVKQVKA 533
Query: 169 TAQNSHGSNGVDKLIKEDEIETKSSDHIANKNPLETDSSTPALY---SEKDEQRSKKRRM 225
T + + K K+ E + K S I P T TP + +K E+ K+ +
Sbjct: 534 TEKAAIEKTVKPKPAKKAEHQEKESPTIKTDKPKPTSKETPEVTESGKKKIEKSEKESKE 593
Query: 226 RTENNNNKRQKKETMGIAESIRWVAEVVVRSEQTRMETLKEIEKMRVEAEAKRGEMEIKR 285
+ E + K +K T ES++ + V ++E+ + +++E + +AK ++
Sbjct: 594 KAEMKHLKEEKVSTR--KESLQ--SHNVTKAEKPARVSREDLEDVSASKKAKEEAEDVSS 649
Query: 286 TE 287
T+
Sbjct: 650 TK 651
>MYSS_RABIT (P02562) Myosin heavy chain, skeletal muscle (Fragments)
Length = 1084
Score = 42.0 bits (97), Expect = 0.002
Identities = 28/148 (18%), Positives = 68/148 (45%), Gaps = 1/148 (0%)
Query: 168 TTAQNSHGSNGVDKLIKEDEIETKSSDHIANKNPLETDSSTPALYSEKDEQRSKKRRMRT 227
T A+ DK++ E + + + + + E+ S + ++ K+ + T
Sbjct: 587 TCARMDKKQRNFDKVLAEWKHKYEETQAELEASQKESRSLSTEVFKVKNAYEESLDHLET 646
Query: 228 ENNNNKRQKKETMGIAESIRWVAEVVVRSEQTRMETLKEIEKMRVEAEAKRGEMEIKRTE 287
NK ++E + E I A+ + E+ + + +E +++ E G +E + +
Sbjct: 647 LKRENKNLQQEISDLTEQIAESAKHIHELEKVKKQIDQEKSELQAALEEAEGSLEHEEGK 706
Query: 288 IIANTQLEIARIFANVNNKDKDKDKDVD 315
I+ QLE+ ++ + ++ K +KD+++D
Sbjct: 707 IL-RIQLELNQVKSEIDRKIAEKDEEID 733
>MYH3_HUMAN (P11055) Myosin heavy chain, fast skeletal muscle,
embryonic (Muscle embryonic myosin heavy chain) (SMHCE)
Length = 1940
Score = 42.0 bits (97), Expect = 0.002
Identities = 28/137 (20%), Positives = 65/137 (47%), Gaps = 3/137 (2%)
Query: 180 DKLIKEDEIETKSSDHIANKNPLETDSSTPALYSEKDEQRSKKRRMRTENNNNKRQKKET 239
DK++ E + + + S + E+ S + L+ K+ ++ T NK ++E
Sbjct: 1451 DKVLAEWKTKCEESQAELEASLKESRSLSTELFKLKNAYEEALDQLETVKRENKNLEQEI 1510
Query: 240 MGIAESIRWVAEVVVRSEQTRMETLKEIEKMRVEAEAKRGEMEIKRTEI-IANTQLEIAR 298
+ E I + + E++R + E+EK ++ + E ++ E I QLE+ +
Sbjct: 1511 ADLTEQIAENGKTIHELEKSRKQI--ELEKADIQLALEEAEAALEHEEAKILRIQLELTQ 1568
Query: 299 IFANVNNKDKDKDKDVD 315
+ + ++ K +KD++++
Sbjct: 1569 VKSEIDRKIAEKDEEIE 1585
>MYH6_HUMAN (P13533) Myosin heavy chain, cardiac muscle alpha isoform
(MyHC-alpha)
Length = 1939
Score = 41.2 bits (95), Expect = 0.004
Identities = 30/137 (21%), Positives = 62/137 (44%), Gaps = 3/137 (2%)
Query: 180 DKLIKEDEIETKSSDHIANKNPLETDSSTPALYSEKDEQRSKKRRMRTENNNNKRQKKET 239
DK++ E + + + S + E S + L+ K+ + T NK ++E
Sbjct: 1452 DKILAEWKQKYEESQSELESSQKEARSLSTELFKLKNAYEESLEHLETFKRENKNLQEEI 1511
Query: 240 MGIAESIRWVAEVVVRSEQTRMETLKEIEKMRVEAEAKRGEMEIKRTE-IIANTQLEIAR 298
+ E + + V E+ R + E+EK+ +++ + E ++ E I QLE +
Sbjct: 1512 SDLTEQLGEGGKNVHELEKVRKQL--EVEKLELQSALEEAEASLEHEEGKILRAQLEFNQ 1569
Query: 299 IFANVNNKDKDKDKDVD 315
I A + K +KD++++
Sbjct: 1570 IKAEIERKLAEKDEEME 1586
>MYH3_CHICK (P02565) Myosin heavy chain, fast skeletal muscle,
embryonic
Length = 1940
Score = 41.2 bits (95), Expect = 0.004
Identities = 46/277 (16%), Positives = 109/277 (38%), Gaps = 28/277 (10%)
Query: 65 QDWEDVAKHVSSRSNSTKSPKTQTQ-CKNKIESMKKRYRSES------------ASSDVS 111
Q E++ +H+ + K P Q ++ + ++++Y E A+S+V+
Sbjct: 1315 QQIEELKRHLEEEIKAKKCPAHALQSARHDCDLLREQYEEEQEAKGELQRALSKANSEVA 1374
Query: 112 SWPLYSRLDLLLRGTGQLSTTTLNNNQ-------------AGLVLLEPSSLVMSHAQEEV 158
W D + R T +L Q + LE + + + E++
Sbjct: 1375 QWRTKYETDAIQR-TEELEEAKKKLAQRLQDAEEHVEAVNSKCASLEKTKQRLQNEVEDL 1433
Query: 159 HQPLVPPPITTAQNSHGSNGVDKLIKEDEIETKSSDHIANKNPLETDSSTPALYSEKDEQ 218
+ A DK++ E + + + + + E+ S + L+ K+
Sbjct: 1434 MIDVERSNAACAALDKKQKNFDKILSEWKQKYEETQAELEASQKESRSLSTELFKMKNAY 1493
Query: 219 RSKKRRMRTENNNNKRQKKETMGIAESIRWVAEVVVRSEQTRMETLKEIEKMRVEAEAKR 278
+ T NK ++E + E I + + E+ + + +E +++ E
Sbjct: 1494 EESLDHLETLKRENKNLQQEISDLTEQIAEGGKAIHELEKVKKQIEQEKSELQTALEEAE 1553
Query: 279 GEMEIKRTEIIANTQLEIARIFANVNNKDKDKDKDVD 315
+E + +I+ QLE+ ++ ++++ K +KD+++D
Sbjct: 1554 ASLEHEEGKIL-RVQLELNQVKSDIDRKIAEKDEEID 1589
>MYH6_RAT (P02563) Myosin heavy chain, cardiac muscle alpha isoform
(MyHC-alpha)
Length = 1938
Score = 40.8 bits (94), Expect = 0.005
Identities = 30/137 (21%), Positives = 62/137 (44%), Gaps = 3/137 (2%)
Query: 180 DKLIKEDEIETKSSDHIANKNPLETDSSTPALYSEKDEQRSKKRRMRTENNNNKRQKKET 239
DK++ E + + + S + E S + L+ K+ + T NK ++E
Sbjct: 1451 DKILAEWKQKYEESQSELESSQKEARSLSTELFKLKNAYEESLEHLETFKRENKNLQEEI 1510
Query: 240 MGIAESIRWVAEVVVRSEQTRMETLKEIEKMRVEAEAKRGEMEIKRTE-IIANTQLEIAR 298
+ E + + V E+ R + E+EK+ +++ + E ++ E I QLE +
Sbjct: 1511 SDLTEQLGEGGKNVHELEKIRKQL--EVEKLELQSALEEAEASLEHEEGKILRAQLEFNQ 1568
Query: 299 IFANVNNKDKDKDKDVD 315
I A + K +KD++++
Sbjct: 1569 IKAEIERKLAEKDEEME 1585
>MYH6_MOUSE (Q02566) Myosin heavy chain, cardiac muscle alpha isoform
(MyHC-alpha)
Length = 1938
Score = 40.8 bits (94), Expect = 0.005
Identities = 30/137 (21%), Positives = 62/137 (44%), Gaps = 3/137 (2%)
Query: 180 DKLIKEDEIETKSSDHIANKNPLETDSSTPALYSEKDEQRSKKRRMRTENNNNKRQKKET 239
DK++ E + + + S + E S + L+ K+ + T NK ++E
Sbjct: 1452 DKILAEWKQKYEESQSELESSQKEARSLSTELFKLKNAYEESLEHLETFKRENKNLQEEI 1511
Query: 240 MGIAESIRWVAEVVVRSEQTRMETLKEIEKMRVEAEAKRGEMEIKRTE-IIANTQLEIAR 298
+ E + + V E+ R + E+EK+ +++ + E ++ E I QLE +
Sbjct: 1512 SDLTEQLGEGGKNVHELEKIRKQL--EVEKLELQSALEEAEASLEHEEGKILRAQLEFNQ 1569
Query: 299 IFANVNNKDKDKDKDVD 315
I A + K +KD++++
Sbjct: 1570 IKAEIERKLAEKDEEME 1586
>MYSS_CHICK (P13538) Myosin heavy chain, skeletal muscle, adult
Length = 1938
Score = 40.4 bits (93), Expect = 0.006
Identities = 27/136 (19%), Positives = 62/136 (44%), Gaps = 1/136 (0%)
Query: 180 DKLIKEDEIETKSSDHIANKNPLETDSSTPALYSEKDEQRSKKRRMRTENNNNKRQKKET 239
DK++ E + + + + + E+ S + L+ K+ + T NK ++E
Sbjct: 1452 DKILAEWKQKYEETQTELEASQKESRSLSTELFKMKNAYEESLDHLETLKRENKNLQQEI 1511
Query: 240 MGIAESIRWVAEVVVRSEQTRMETLKEIEKMRVEAEAKRGEMEIKRTEIIANTQLEIARI 299
+ E I + V E+ + +E +++ E +E + +I+ QLE+ +I
Sbjct: 1512 ADLTEQIAEGGKAVHELEKVKKHVEQEKSELQASLEEAEASLEHEEGKIL-RLQLELNQI 1570
Query: 300 FANVNNKDKDKDKDVD 315
+ ++ K +KD+++D
Sbjct: 1571 KSEIDRKIAEKDEEID 1586
>SEM1_HUMAN (P04279) Semenogelin I protein precursor (SGI)
[Contains: Alpha-inhibin-92; Alpha-inhibin-31; Seminal
basic protein]
Length = 462
Score = 40.0 bits (92), Expect = 0.008
Identities = 47/215 (21%), Positives = 83/215 (37%), Gaps = 29/215 (13%)
Query: 5 IENKDQIQ-----QNQESPRKLQNNIIGSGNERLKRDEWSEGAVTTLLEAYESKWVLRNR 59
+ NK+Q Q Q+Q+ RK S + +R + E V + +S +
Sbjct: 262 VYNKNQHQTKNLNQDQQHGRKANKISYQSSSTEERRLHYGENGVQK--DVSQSSIYSQTE 319
Query: 60 AKLKGQDWEDVAKHVSSRSNSTKSPKTQTQCKNKIESMKKRYRSESASSDVSSWPLYSRL 119
K +G+ + + + +S K+ K Q + E + Y DVS +YS+
Sbjct: 320 EKAQGKSQKQITIPSQEQEHSQKANKISYQ-SSSTEERRLHYGENGVQKDVSQRSIYSQT 378
Query: 120 DLLLRGTGQLSTTTLN---------NNQAGLVLLEPSSLVMSHAQEEVHQPLVPPPITTA 170
+ L+ G Q+ ++G L +SH Q+ HQ
Sbjct: 379 EKLVAGKSQIQAPNPKQEPWHGENAKGESGQSTNREQDL-LSHEQKGRHQ---------- 427
Query: 171 QNSHGSNGVDKLIKEDEIETKSSDHIAN-KNPLET 204
SHG + + +ED+ + + H+ N +NPL T
Sbjct: 428 HGSHGGLDIVIIEQEDDSDRHLAQHLNNDRNPLFT 462
>MYH8_HUMAN (P13535) Myosin heavy chain, skeletal muscle, perinatal
(MyHC-perinatal)
Length = 1937
Score = 40.0 bits (92), Expect = 0.008
Identities = 29/137 (21%), Positives = 64/137 (46%), Gaps = 3/137 (2%)
Query: 180 DKLIKEDEIETKSSDHIANKNPLETDSSTPALYSEKDEQRSKKRRMRTENNNNKRQKKET 239
DK++ E + + + + + E+ S + L+ K+ ++ T NK ++E
Sbjct: 1453 DKVLSEWKQKYEETQAELEASQKESRSLSTELFKVKNVYEESLDQLETLRRENKNLQQEI 1512
Query: 240 MGIAESIRWVAEVVVRSEQTRMETLKEIEKMRVEAEAKRGEMEIKRTE-IIANTQLEIAR 298
+ E I + + E+ + + E EK ++A + E ++ E I QLE+ +
Sbjct: 1513 SDLTEQIAEGGKQIHELEKIKKQV--EQEKCEIQAALEEAEASLEHEEGKILRIQLELNQ 1570
Query: 299 IFANVNNKDKDKDKDVD 315
+ + V+ K +KD+++D
Sbjct: 1571 VKSEVDRKIAEKDEEID 1587
>MYH3_RAT (P12847) Myosin heavy chain, fast skeletal muscle, embryonic
Length = 1940
Score = 40.0 bits (92), Expect = 0.008
Identities = 28/137 (20%), Positives = 64/137 (46%), Gaps = 3/137 (2%)
Query: 180 DKLIKEDEIETKSSDHIANKNPLETDSSTPALYSEKDEQRSKKRRMRTENNNNKRQKKET 239
DK++ E + + + S E+ S + L+ K+ ++ T NK ++E
Sbjct: 1451 DKVLAEWKTKCEESQAELEAALKESRSLSTELFKLKNAYEEALDQLETVKRENKNLEQEI 1510
Query: 240 MGIAESIRWVAEVVVRSEQTRMETLKEIEKMRVEAEAKRGEMEIKRTEI-IANTQLEIAR 298
+ E I + + E++R + E+EK ++ + E ++ E I QLE+ +
Sbjct: 1511 ADLTEQIAENGKSIHELEKSRKQM--ELEKADIQMALEEAEAALEHEEAKILRIQLELTQ 1568
Query: 299 IFANVNNKDKDKDKDVD 315
+ + ++ K +KD++++
Sbjct: 1569 VKSEIDRKIAEKDEEIE 1585
>YATE_SCHPO (Q09779) Hypothetical protein C1D4.14 in chromosome I
Length = 1628
Score = 39.7 bits (91), Expect = 0.010
Identities = 22/73 (30%), Positives = 42/73 (57%), Gaps = 4/73 (5%)
Query: 167 ITTAQNSHGSN-GVDKLIKEDEIETKSSDHIANKNPLETDSSTPALYSEKDEQRSKKRRM 225
I+ A S+GSN G D D +S+ + +NK P +DS +P+ E+DE+ + +RR
Sbjct: 1538 ISRAGRSNGSNRGNDS---RDADGRRSTHYASNKRPRSSDSQSPSNLREEDERENSRRRA 1594
Query: 226 RTENNNNKRQKKE 238
R ++ ++ +++
Sbjct: 1595 RQDDRRDRDSRQQ 1607
>NSR1_YEAST (P27476) Nuclear localization sequence binding protein
(P67)
Length = 414
Score = 39.3 bits (90), Expect = 0.014
Identities = 37/169 (21%), Positives = 75/169 (43%), Gaps = 14/169 (8%)
Query: 76 SRSNSTKSPKTQTQCKNKIESMKKRYRSESASSDVSSWPLYSRLDLLLRGTGQLSTTTLN 135
+++ K K + + + + K + S S+S SS S + + S+++ +
Sbjct: 2 AKTTKVKGNKKEVKASKQAKEEKAKAVSSSSSESSSSSSSSSESESESESESESSSSSSS 61
Query: 136 NNQAGLVLLEPSSLVMSHAQEEVHQPLVPPPITTAQNSHGSNGVDKLIKEDEIETKSSDH 195
++ E SS S ++ E +++ +S S+ D+ +E++ ETK +
Sbjct: 62 SDS------ESSSSSSSDSESEAETKKEESKDSSSSSSDSSS--DEEEEEEKEETKKEES 113
Query: 196 IANKNPLETDSSTPALYSEKDEQRSKKRRM------RTENNNNKRQKKE 238
+ + + SS+ SEK+E KKR+ E ++NK+QK E
Sbjct: 114 KESSSSDSSSSSSSDSESEKEESNDKKRKSEDAEEEEDEESSNKKQKNE 162
>RBP2_PLAVB (Q00799) Reticulocyte binding protein 2 precursor
(PvRBP-2)
Length = 2867
Score = 38.9 bits (89), Expect = 0.018
Identities = 55/290 (18%), Positives = 118/290 (39%), Gaps = 31/290 (10%)
Query: 1 MNEKIENKDQIQQNQESPRKLQNNIIGSGNERLKRDEWSEGAVTTLLEAYESKWVLRNRA 60
MN+++E + + E +K + I + K +E+ +G + Y ++ ++
Sbjct: 1253 MNDEVEKSKIVMEKIELYKKEIDEI------KQKTNEYKQGDTSNFY--YTEQYNSATQS 1304
Query: 61 KLKGQDWEDVAKHVSSRSNSTKSPKTQTQCKNKIESMKKRYRSESASSDVSSWPLYSRLD 120
K K + + ++A S++++ K ++ + + ES S + + S D
Sbjct: 1305 KAKIEQFINIATTKKGTSDTSQDINELESIKEEVHKNLQLVKQESNSMEEMRKQILSMKD 1364
Query: 121 LLLRGTGQLSTTTLNNNQAGLVLLEPSSLVMSHAQEEVHQPLVPPPITTAQNSHGSNGVD 180
LL+ + ++NN + ++ + +E+ Q + + +H N +D
Sbjct: 1365 LLILNNSETIAKEISNNTQNALGFRENAKTKLNKTDELLQRVA--AMIEEAKAH-KNNID 1421
Query: 181 KLIKEDEIETK-SSDHIANKNPLETDSSTPALYSEKDEQRSKKRRMRTENNNNKRQK--- 236
+++ +I+T+ S N+ + + SE E + K TE +N+KR K
Sbjct: 1422 IALEDAQIDTEVSKIEQINREIMNKKDEIKSYLSEIKEYKDK---CTTEISNSKRGKDKI 1478
Query: 237 ---------KETMGIAESIRWVAEVVVRSEQTRMETLKEIEKMRVEAEAK 277
+E+ +I + E + SEQ LK+IE +A K
Sbjct: 1479 EFLEKFKPNEESNSNKVNINEINENIRNSEQ----YLKDIEDAEKQASTK 1524
>MYH1_HUMAN (P12882) Myosin heavy chain, skeletal muscle, adult 1
(Myosin heavy chain IIx/d) (MyHC-IIx/d)
Length = 1939
Score = 38.9 bits (89), Expect = 0.018
Identities = 26/136 (19%), Positives = 64/136 (46%), Gaps = 1/136 (0%)
Query: 180 DKLIKEDEIETKSSDHIANKNPLETDSSTPALYSEKDEQRSKKRRMRTENNNNKRQKKET 239
DK++ E + + + + + E+ S + L+ K+ ++ T NK ++E
Sbjct: 1454 DKILAEWKQKCEETHAELEASQKESRSLSTELFKIKNAYEESLDQLETLKRENKNLQQEI 1513
Query: 240 MGIAESIRWVAEVVVRSEQTRMETLKEIEKMRVEAEAKRGEMEIKRTEIIANTQLEIARI 299
+ E I + + E+ + + +E +++ E +E + +I+ QLE+ ++
Sbjct: 1514 SDLTEQIAEGGKRIHELEKIKKQVEQEKSELQAALEEAEASLEHEEGKIL-RIQLELNQV 1572
Query: 300 FANVNNKDKDKDKDVD 315
+ V+ K +KD+++D
Sbjct: 1573 KSEVDRKIAEKDEEID 1588
>BPA1_HUMAN (Q03001) Bullous pemphigoid antigen 1 isoforms 1/2/3/4/5/8
(230 kDa bullous pemphigoid antigen) (BPA)
(Hemidesmosomal plaque protein) (Dystonia musculorum
protein) (Dystonin) (Fragment)
Length = 3214
Score = 38.9 bits (89), Expect = 0.018
Identities = 62/290 (21%), Positives = 119/290 (40%), Gaps = 36/290 (12%)
Query: 9 DQIQQNQESPRKLQNNIIGSGNERLKRDEWSEGAVTTLLEAYESKWVLRNRAKLKGQDWE 68
D IQQ + + RK+Q N E + T + + K +L + ++K +
Sbjct: 1528 DWIQQVETTQRKIQEN-------------QPENSKTLATQLNQQK-MLVSEIEMKQSKMD 1573
Query: 69 DVAKHVSSRSNSTKSPKTQTQCKNKI-----ESMKKRYRSESASSDVSSWPLYSRLDLLL 123
+ K+ S + K + QT + +S KR R +S++ + + +DL
Sbjct: 1574 ECQKYAEQYSATVKDYELQTMTYRAMVDSQQKSPVKRRRMQSSADLI----IQEFMDLRT 1629
Query: 124 RGTGQLSTTTLNNNQAG--LVLLEPSSLVMSHAQEEVHQPLVPPPITTAQNSHGSNGVDK 181
R T ++ T AG L LE ++++ ++ V+ + + HG+ D
Sbjct: 1630 RYTALVTLMTQYIKFAGDSLKRLEEEEVIIN-SEHPVNIKELEIKRCKETSEHGAYS-DL 1687
Query: 182 LIKEDEIETKSSDHIANKNPLETDSSTPALYSEKDEQRSKKRRMRTENNNNKRQKK-ETM 240
L ++ ++S + LE + + E+ K R EN K+Q+ E +
Sbjct: 1688 LQRQKATVLENSKLTGKISELERMVAELKKQKSRVEEELPKVREAAENELRKQQRNVEDI 1747
Query: 241 GI--------AESIRWVAEVVVRSEQTRMETLKEIEKMRVEAEAKRGEME 282
+ A+ R E +VR ++ L+ + ++ +EAEAKR +E
Sbjct: 1748 SLQKIRAESEAKQYRRELETIVREKEAAERELERVRQLTIEAEAKRAAVE 1797
>BICD_DROME (P16568) Cytoskeleton-like bicaudal D protein
Length = 782
Score = 38.9 bits (89), Expect = 0.018
Identities = 46/218 (21%), Positives = 93/218 (42%), Gaps = 15/218 (6%)
Query: 107 SSDVSSWPLYSRLDLLLRGTGQLSTTTLNNNQAGLVLLEPSSLVMSHAQE--------EV 158
S+D S L ++ L R Q+S+ + + Q GL LLE S + +E
Sbjct: 10 SADQSVQDLQMEVERLTRELDQVSSASAQSAQYGLSLLEEKSALQQKCEELETLYDNTRH 69
Query: 159 HQPLVPPPITTAQNSHGSNGVDKLIKEDEI--ETKSSDHIANKNPLETDSSTPALYSEKD 216
+ +T Q S + +ED + E+ + + N + ++ L E +
Sbjct: 70 ELDITQEALTKFQTSQKVTNKTGIEQEDALLNESAARETSLNLQIFDLENELKQLRHELE 129
Query: 217 EQRSKKRRMRTENNNNKRQKKETMGIAESIRWVAEVV-VRSEQTRM-ETLKEIEKMRVEA 274
R+++ RM EN++ R K ++ A+ +R +E+ ++ +TRM E+E+ +
Sbjct: 130 RVRNERDRMLQENSDFGRDKSDSE--ADRLRLKSELKDLKFRETRMLSEYSELEEENISL 187
Query: 275 EAKRGEMEIKRTEIIANTQLEIARIFANVNNKDKDKDK 312
+ + + + E + EI R+ V ++ D+
Sbjct: 188 QKQVSSLRSSQVE-FEGAKHEIRRLTEEVELLNQQVDE 224
>CAC1_YEAST (Q12495) Chromatin assembly factor 1 p90 subunit (CAF-1
90 kDa subunit) (RAP1 localization factor 2)
Length = 606
Score = 38.5 bits (88), Expect = 0.023
Identities = 46/209 (22%), Positives = 87/209 (41%), Gaps = 39/209 (18%)
Query: 130 STTTLNNNQAGLVLLEPSSLVMSHAQEEVHQPLVPPPITTAQNSHG-------------S 176
+TTT+ +N+ + E + + +E+V P++ S +
Sbjct: 25 NTTTVKSNK--FLTKEKDVITLDDPKEDVSGPMIETVKQETMKSINKECADEMKTTPKKA 82
Query: 177 NGVDKLI--KEDEIETKSSDHIANKN-------PLETDSSTPALYSEKDEQRSKKRRMRT 227
N DKL+ K I++ D NK +ET S + + S+++ SKK +
Sbjct: 83 NAEDKLLCYKNSPIQSTKYDRNTNKQVPNGNIIAIETKSRSSSPCSKRELSSSKKEEAKR 142
Query: 228 ENNNNKRQKKETMGIAESIRWVAEVVVRSEQTRMETLKEIEKMRVEAEAKRGEMEIKRTE 287
E K+Q+ E E ++R E+ + + LK E+ + AE K+ + E KR +
Sbjct: 143 EKELKKQQRAEEKHRKE--------LLRQEEKKKKELKVEEERQRRAELKKQKEEEKRRK 194
Query: 288 IIANTQLEIARIFANVNNKDKDKDKDVDV 316
E AR+ A +++ K+ ++
Sbjct: 195 -------EEARLEAKRRKEEERLKKEEEI 216
>YFI6_YEAST (P43597) Hypothetical 137.7 kDa protein in UGS1-FAB1
intergenic region
Length = 1233
Score = 38.1 bits (87), Expect = 0.030
Identities = 30/122 (24%), Positives = 55/122 (44%), Gaps = 7/122 (5%)
Query: 167 ITTAQNSHGSNGVDKLIKEDEIETKSSDHIANKNPLETDSSTPALYSEKDEQRSKKRRMR 226
+T N + +++IETK S+ + P+E + T A S+KD + K
Sbjct: 893 VTAELNKENEDVEVAATSKEDIETKCSEPA--ETPIEDGTCTEAEVSKKDAEAVTKEDEN 950
Query: 227 TENNNNKRQKKETMGIAESIRWVAEVVVRSEQTRMETLKEIEKMRV-EAEAKRGEMEIKR 285
EN+ K+ G E + ++ + E R L E+EK + + + + E+E++
Sbjct: 951 MENSKIAEALKDVTGDQE----IDDINISDEFQRTVELPELEKQDIKDNKGEDKELEVEE 1006
Query: 286 TE 287
TE
Sbjct: 1007 TE 1008
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.306 0.123 0.328
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 35,686,064
Number of Sequences: 164201
Number of extensions: 1438621
Number of successful extensions: 4957
Number of sequences better than 10.0: 202
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 191
Number of HSP's that attempted gapping in prelim test: 4762
Number of HSP's gapped (non-prelim): 346
length of query: 325
length of database: 59,974,054
effective HSP length: 110
effective length of query: 215
effective length of database: 41,911,944
effective search space: 9011067960
effective search space used: 9011067960
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (22.0 bits)
S2: 66 (30.0 bits)
Medicago: description of AC126006.11