BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC125481.7 + phase: 0 /pseudo
         (489 letters)

Database: sprot 
           164,201 sequences; 59,974,054 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

IP3S_MOUSE (Q9Z329) Inositol 1,4,5-trisphosphate receptor type 2...    33  1.3
CARB_BUCAP (Q8K9Z7) Carbamoyl-phosphate synthase large chain (EC...    32  3.7
IP3S_RAT (P29995) Inositol 1,4,5-trisphosphate receptor type 2 (...    31  8.3

>IP3S_MOUSE (Q9Z329) Inositol 1,4,5-trisphosphate receptor type 2
           (Type 2 inositol 1,4,5-trisphosphate receptor) (Type 2
           InsP3 receptor) (IP3 receptor isoform 2) (InsP3R2)
           (Inositol 1,4,5-trisphosphate type V receptor)
           (Fragments)
          Length = 1281

 Score = 33.5 bits (75), Expect = 1.3
 Identities = 31/99 (31%), Positives = 47/99 (47%), Gaps = 18/99 (18%)

Query: 56  TDASNVGQKIVLQPSFAGGRHYMFNNCQDAMSICKKYGYPDLFVTIACNTNWREIQDFLK 115
           ++  NVG K+VL P  AG   +  N        CK+         + CNT+W+ I  F+K
Sbjct: 171 SEGDNVGDKVVLMPVNAGQPLHASNVELLDNPGCKEVN------AVNCNTSWK-ITLFMK 223

Query: 116 -----ERNLKASDRPDIVCRVFKMKLDKLM--DDFEKEE 147
                E  LK  D    V R+F  + +K +  DD+EK++
Sbjct: 224 FSSYREDVLKGGD----VVRLFHAEQEKFLTCDDYEKKQ 258


>CARB_BUCAP (Q8K9Z7) Carbamoyl-phosphate synthase large chain (EC
           6.3.5.5) (Carbamoyl-phosphate synthetase ammonia chain)
          Length = 1076

 Score = 32.0 bits (71), Expect = 3.7
 Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 4/42 (9%)

Query: 35  NQKTIRCGILNGLHEAMDMGETDASNVGQKIVLQPSFAGGRH 76
           N KT +CGI + + EA+ +      NVG   +++PSF  G H
Sbjct: 139 NLKTAKCGIAHNIQEALLV----LKNVGFPCIIRPSFTMGGH 176


>IP3S_RAT (P29995) Inositol 1,4,5-trisphosphate receptor type 2
           (Type 2 inositol 1,4,5-trisphosphate receptor) (Type 2
           InsP3 receptor) (IP3 receptor isoform 2) (InsP3R2)
          Length = 2701

 Score = 30.8 bits (68), Expect = 8.3
 Identities = 32/100 (32%), Positives = 46/100 (46%), Gaps = 18/100 (18%)

Query: 55  ETDASNVGQKIVLQPSFAGGRHYMFNNCQDAMSICKKYGYPDLFVTIACNTNWREIQDFL 114
           E D   VG K+VL P  AG   +  N        CK+         + CNT+W+ I  F+
Sbjct: 172 EGDNIVVGDKVVLMPVNAGQPLHASNVELLDNPGCKEVN------AVNCNTSWK-ITLFM 224

Query: 115 K-----ERNLKASDRPDIVCRVFKMKLDKLM--DDFEKEE 147
           K     E  LK  D    V R+F  + +K +  DD+EK++
Sbjct: 225 KFSSYREDVLKGGD----VVRLFHAEQEKFLTCDDYEKKQ 260


  Database: sprot
    Posted date:  Nov 25, 2004 10:54 AM
  Number of letters in database: 59,974,054
  Number of sequences in database:  164,201
  
Lambda     K      H
   0.342    0.150    0.514 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 54,939,391
Number of Sequences: 164201
Number of extensions: 2278093
Number of successful extensions: 6362
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 6358
Number of HSP's gapped (non-prelim): 8
length of query: 489
length of database: 59,974,054
effective HSP length: 114
effective length of query: 375
effective length of database: 41,255,140
effective search space: 15470677500
effective search space used: 15470677500
T: 11
A: 40
X1: 15 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (22.0 bits)
S2: 68 (30.8 bits)