BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC125478.8 + phase: 0
(1222 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
FUTS_DROME (Q9W596) Microtubule-associated protein futsch 61 2e-08
USO1_YEAST (P25386) Intracellular protein transport protein USO1 57 3e-07
ATRX_CAEEL (Q9U7E0) Transcriptional regulator ATRX homolog (X-li... 52 8e-06
ANRZ_HUMAN (Q6UB98) Ankyrin repeat domain protein 12 (Ankyrin re... 50 3e-05
RA50_PYRAB (Q9UZC8) DNA double-strand break repair rad50 ATPase 49 6e-05
KTN1_HUMAN (Q86UP2) Kinectin (Kinesin receptor) (CG-1 antigen) 49 6e-05
SBCC_CLOAB (Q97FK1) Nuclease sbcCD subunit C 48 1e-04
MFP1_ARATH (Q9LW85) MAR binding filament-like protein 1 48 1e-04
CYL2_HUMAN (Q14093) Cylicin II (Multiple-band polypeptide II) 47 3e-04
YNN6_YEAST (P53911) Hypothetical 49.4 kDa protein in NAM9-FPR1 i... 46 5e-04
MYHB_CHICK (P10587) Myosin heavy chain, gizzard smooth muscle 45 0.001
CALD_CHICK (P12957) Caldesmon (CDM) 45 0.001
YM96_YEAST (Q04893) Hypothetical 113.1 kDa protein in PRE5-FET4 ... 45 0.002
NFM_RAT (P12839) Neurofilament triplet M protein (160 kDa neurof... 45 0.002
TRHY_SHEEP (P22793) Trichohyalin 44 0.003
NFM_MOUSE (P08553) Neurofilament triplet M protein (160 kDa neur... 44 0.003
GAR2_SCHPO (P41891) Protein gar2 44 0.003
MAPB_RAT (P15205) Microtubule-associated protein 1B (MAP 1B) (Ne... 43 0.005
TRDN_CANFA (P82179) Triadin 43 0.006
NFH_MOUSE (P19246) Neurofilament triplet H protein (200 kDa neur... 43 0.006
>FUTS_DROME (Q9W596) Microtubule-associated protein futsch
Length = 5412
Score = 61.2 bits (147), Expect = 2e-08
Identities = 216/1071 (20%), Positives = 376/1071 (34%), Gaps = 169/1071 (15%)
Query: 163 DGNSQQNVKNVSMESSPFKPHDAP-PSTVNECDTSTKDKHMVTDYEVLQKSSTQEEPKPG 221
D + +++ + E SP +A P++V E S KD+ + E ++S ++ P P
Sbjct: 3407 DKSKEESRRESGAEKSPLASKEASRPASVAE---SIKDEAEKSKEESRRESVAEKSPLPS 3463
Query: 222 ST----TSVAYGVQERDQKYIKKWHLMYKHAVLSNTGKCDNKVPLVEKEKEGGEEDNEGN 277
TSVA V++ +K ++ S K PL KE E
Sbjct: 3464 KEASRPTSVAESVKDEAEKSKEE----------SRRDSVAEKSPLASKEASRPASVAESV 3513
Query: 278 NSYRNYSETDSDMDDEKKNVIELVQKAFDEILLP-EVEDLSSEGHSKSRGNETDEVLLEK 336
S+ +S +++V E A E P V + + KS+ E + EK
Sbjct: 3514 QDEAEKSKEES----RRESVAEKSPLASKEASRPASVAESIKDEAEKSKEESRRESVAEK 3569
Query: 337 SG-GKIEERNTTTFTESPKEVPKMESKQKSWSHLKKVILLKRFVKALEKVRNINSRRPRQ 395
S E T+ ES K+ + ++ S + V + + + RP
Sbjct: 3570 SPLASKEASRPTSVAESVKDEAEKSKEESS----------RDSVAEKSPLASKEASRPAS 3619
Query: 396 LPSDANFEAEKVLLNRQTSEERKKSEEWMLDYALQKVISKLAPAQRQRVTLLVEAFETIR 455
+ EAEK + EE ++ K S+ A ++ E R
Sbjct: 3620 VAESVQDEAEK------SKEESRRESVAEKSPLASKEASRPASVAESVKDDAEKSKEESR 3673
Query: 456 PVQDAENGPQTSATVESHANLIQSLDASSNHSKEEINDR--------------RDFEVTE 501
AE P S A++ +S+ + SKEE R V E
Sbjct: 3674 RESVAEKSPLASKEASRPASVAESVKDEAEKSKEESRRESVAEKSPLPSKEASRPTSVAE 3733
Query: 502 RARNDKNMDACKKNDESATVKST-ATKAVKFPVCDTGIMEEEVTAEGEYKVQEKSIVKED 560
+++ + ES KS+ A+K P +++E E +E K
Sbjct: 3734 SVKDEAEKSKEESRRESVAEKSSLASKKASRPASVAESVKDEAEKSKEESRRESVAEKSP 3793
Query: 561 L--KHGTSTTDVPYGVQ---ERDQKYIKKWHLMYKQAVLSNTGKYDNKLPVVGKDKEGRE 615
L K + V V+ E+ ++ ++ + K + S + KD+ +
Sbjct: 3794 LASKEASRPASVAESVKDEAEKSKEESRRESVAEKSPLPSKEASRPTSVAESVKDEADKS 3853
Query: 616 QGDAVFNGGNNSS-------CHNYNETDSDMDEEKKNVIELVQKAFDEIL-LPETE---- 663
+ ++ G S + +S DE +K+ E +++ E LP E
Sbjct: 3854 KEESRRESGAEKSPLASMEASRPTSVAESVKDETEKSKEESRRESVTEKSPLPSKEASRP 3913
Query: 664 ----DLSSDDRSKSRSYGSDE-LLEKSE-GEREEMNATSFTETPK---EAKKTENKPKSW 714
+ D+ KS+ E + EKS +E S E+ K E K E++ +S
Sbjct: 3914 TSVAESVKDEAEKSKEESRRESVAEKSPLASKESSRPASVAESIKDEAEGTKQESRRESM 3973
Query: 715 SHLKKLIMLKRFVKALDKVRNINP-------RRPRELPSDANFEGEKVFLNRQTSEERKK 767
K +K +L P + E P + + +V ++ K
Sbjct: 3974 PESGKAESIKGDQSSLASKETSRPDSVVESVKDETEKPEGSAIDKSQVASRPESVAVSAK 4033
Query: 768 SEEWMLDYALQKVISKLAPAQRQRVTLLIEAFETLRPIQDAENGLRSSATVESLENPLQS 827
E+ L + V K A ++ L A PI E G RS A L PL +
Sbjct: 4034 DEKSPLHSRPESVADKSPDASKEASRSLSVAETASSPI---EEGPRSIA---DLSLPL-N 4086
Query: 828 LDASSVLSAKTLLGKVSFSNDSTMEFSDKASDNPMPELCKPIKPVETISSCHEEAPTKRM 887
L + TL + + +E KA +P P + KP E S
Sbjct: 4087 LTGEAKGKLPTLSSPIDVAEGDFLEV--KAESSPRPAVLS--KPAE-FSQPDTGHTASTP 4141
Query: 888 VDEVPEDLVSDLNTKTKDVIGGHGEQFSVTKSLILNGIVRSLRSNLVVPEAPSNRLDEPT 947
VDE ++ ++ + G G + ++ +L+ + +S V ++ + + T
Sbjct: 4142 VDEA-SPVLEEIEVVEQHTTSGVGATGATAETDLLD--LTETKSETVTKQSETTLFETLT 4198
Query: 948 T-----------DIKDVVEKDQLEKSEAPTSAVVESKNQLEKQGSTGLW---------FT 987
+ +K V EK Q +A T+ V +S QL K+ S L F
Sbjct: 4199 SKVESKVEVLESSVKQVEEKVQTSVKQAETT-VTDSLEQLTKKSSEQLTEIKSVLDTNFE 4257
Query: 988 VFKHMVSDMT---------------------ENNSKTSTDVADEKDSKYEDITTREISVS 1026
+V+D+ E K++ D +E D D + EISV
Sbjct: 4258 EVAKIVADVAKVLKSDKDITDIIPDFDERQLEEKLKSTADTEEESDKSTRDEKSLEISVK 4317
Query: 1027 YE-----------NTPVVIQDMPFKDRAVVDAEVELRQIEAIKMVEDAIDSILPDTQPLP 1075
E + P+ I++ KD+ + +LRQ +++ S P++ P P
Sbjct: 4318 VEIESEKSSPDQKSGPISIEE---KDKIEQSEKAQLRQGILTSSRPESVAS-QPESVPSP 4373
Query: 1076 DNSTIDRTGGIYSEGLNQKEQKMESGNGIVEERKEESVSKEVNKPNQKLSR 1126
S KE ++ + + + ESV+ +V++ + K SR
Sbjct: 4374 SQSAASH---------EHKEVELSESHKAEKSSRPESVASQVSEKDMKTSR 4415
Score = 55.8 bits (133), Expect = 7e-07
Identities = 216/1113 (19%), Positives = 411/1113 (36%), Gaps = 141/1113 (12%)
Query: 133 SQKSTKKDGRSKQVGNARKGTQKTKTVHSEDGNSQQNV----KNVSMES-SPFKPHDA-- 185
SQK K SK+ + +K + + ++V + V ES SP D
Sbjct: 2934 SQKDEKSTLASKEASRRESVVESSKDDAEKSESRPESVIASGEPVPRESKSPLDSKDTSR 2993
Query: 186 PPSTVNECDTSTKDKHMVTDYEVLQKSSTQEEPKPGST------TSVAYGVQERDQKY-I 238
P S V + + E + +S + K G + +SV +++ D+K
Sbjct: 2994 PGSMVESVTAEDEKSEQQSRRESVAESVKADTKKDGKSQEASRPSSVDELLKDDDEKQES 3053
Query: 239 KKWHLMYKHAVLSNTGKCDNKVPLVEKEKEGGEEDNEGNN-SYRNYSETDSDMDDEKKNV 297
++ + H +S G ++ + +K KE ++ + + N + +S + + +V
Sbjct: 3054 RRQSITGSHKAMSTMGD-ESPMDKADKSKEPSRPESVAESIKHENTKDEESPLGSRRDSV 3112
Query: 298 IELVQKAFDEILLPEVEDLSSEGHSKSRGNETDEVLLEKSGGKIEERNTTTFTESPKEVP 357
E ++ +I E L S+ S+ E G I++ + ES E
Sbjct: 3113 AESIKS---DITKGEKSPLPSKEVSRP----------ESVVGSIKDEKAESRRESVAESV 3159
Query: 358 KMESKQKSWS------HLKKVILLKRFVKALEKVRNINSRRPRQLPSDANFEAEKVLLNR 411
K ES + + S H + +L +K + R++ + + EK LL
Sbjct: 3160 KPESSKDATSAPPSKEHSRPESVLGSLKDEGDKTTS------RRVSVADSIKDEKSLLVS 3213
Query: 412 QTSEERKKSEEWMLDYALQKVISKLAPAQRQRVTLLVEAFETIRPVQDAEN-----GPQT 466
Q + + E + D A AP+Q ET RP E+ P
Sbjct: 3214 QEASRPESEAESLKDAA--------APSQ-----------ETSRPESVTESVKDGKSPVA 3254
Query: 467 SATVESHANLIQSLDASSNHSKEEINDRRDFEVTERARNDKNMDACKKNDESATVKSTAT 526
S A++ ++ S++ SKE+ + +++K+ A K E + +S
Sbjct: 3255 SKEASRPASVAENAKDSADESKEQRPESLPQSKAGSIKDEKSPLASKDEAEKSKEESRRE 3314
Query: 527 K-AVKFPVCDTGI-----MEEEVTAEGEYKVQEKSIVKEDLKHGTSTTDVPYGVQERDQK 580
A +FP+ + + E V E E +E ++ ++ S E+ ++
Sbjct: 3315 SVAEQFPLVSKEVSRPASVAESVKDEAEKSKEESPLMSKEASRPASVAGSVKDEAEKSKE 3374
Query: 581 YIKKWHLMYKQAVLSNTGKYDNKLPVVGKDKEGREQGDAVFNGGNNSSCHNYNETD--SD 638
++ + K + S + KD+ + + ++ G S E +
Sbjct: 3375 ESRRESVAEKSPLPSKEASRPASVAESVKDEADKSKEESRRESGAEKSPLASKEASRPAS 3434
Query: 639 MDEEKKNVIELVQKAFDEILLPETEDLSSDDRSKSRSYGSDELLEKSEGEREEMNATSFT 698
+ E K+ E ++ + E L S + S+ S ++ + +++E +EE S
Sbjct: 3435 VAESIKDEAEKSKEESRRESVAEKSPLPSKEASRPTSV-AESVKDEAEKSKEESRRDSVA 3493
Query: 699 ETPKEAKKTENKPKSWSH-LKKLIMLKRFVKALDKVRNINPRRPRELPSDANFEGEKVFL 757
E A K ++P S + ++ + + V +P +E A+ E +
Sbjct: 3494 EKSPLASKEASRPASVAESVQDEAEKSKEESRRESVAEKSPLASKEASRPASV-AESI-- 3550
Query: 758 NRQTSEERKKSEEWMLDYALQKVISKLAPAQRQRVTLLIEAFETLRPIQDAENGLRSSAT 817
E K EE + +K S LA + R T + E+ + +AE S+
Sbjct: 3551 ---KDEAEKSKEESRRESVAEK--SPLASKEASRPTSVAESVK-----DEAEKSKEESSR 3600
Query: 818 VESLE-NPLQSLDASSVLSAKTLLGKVSFSNDSTMEFSDKASDNPMP--ELCKPIKPVET 874
E +PL S +AS S + + + A +P+ E +P E+
Sbjct: 3601 DSVAEKSPLASKEASRPASVAESVQDEAEKSKEESRRESVAEKSPLASKEASRPASVAES 3660
Query: 875 ISSCHEEAPTKRMVDEVPED--LVSDLNTKTKDVIGGHGEQFSVTKSLILNGIVRSLRSN 932
+ E++ + + V E L S ++ V ++ +K S R +
Sbjct: 3661 VKDDAEKSKEESRRESVAEKSPLASKEASRPASVAESVKDEAEKSKE-------ESRRES 3713
Query: 933 LVVPEA-PSNRLDEPTT---DIKDVVEKDQLE---------------KSEAPTSAVVESK 973
+ PS PT+ +KD EK + E K+ P S K
Sbjct: 3714 VAEKSPLPSKEASRPTSVAESVKDEAEKSKEESRRESVAEKSSLASKKASRPASVAESVK 3773
Query: 974 NQLEKQGSTGLWFTVFKH--MVSDMTENNSKTSTDVADEKDSKYEDITTREISVSYENTP 1031
++ EK +V + + S + + V DE + E+ +R SV+ E +P
Sbjct: 3774 DEAEKSKEESRRESVAEKSPLASKEASRPASVAESVKDEAEKSKEE--SRRESVA-EKSP 3830
Query: 1032 VVIQDMPFKDRAVVDAEVELRQIEAIKMVEDAIDSILPDTQPLPDNSTIDRTGGIYSEGL 1091
+P K+ + + E + EA K E++ + PL T +E +
Sbjct: 3831 -----LPSKEASRPTSVAESVKDEADKSKEESRRESGAEKSPLASMEASRPTS--VAESV 3883
Query: 1092 NQKEQKMESGNGIVEERKEESVSKEVNKPNQKLSRNWSNLKKVVLLRRFIKALEKVRKFN 1151
+ +K + EE + ESV+++ P+++ SR S + V K+ E+ R+ +
Sbjct: 3884 KDETEKSK------EESRRESVTEKSPLPSKEASRPTSVAESV--KDEAEKSKEESRRES 3935
Query: 1152 PREPRYLPLEPDSEDEKVQLRHQDMAERKGTEE 1184
E L + S V +D AE GT++
Sbjct: 3936 VAEKSPLASKESSRPASVAESIKDEAE--GTKQ 3966
Score = 40.8 bits (94), Expect = 0.023
Identities = 97/511 (18%), Positives = 188/511 (35%), Gaps = 90/511 (17%)
Query: 800 ETLRPIQDAENGLRSSATVESLENPLQSLDAS-SVLSAKTLLGKVSFSNDSTMEFSDKAS 858
E LR E+ R+ + E + S D S VL + V+ S D +
Sbjct: 2635 EALRTPSAPEHISRADSPAECASEEIASQDKSPQVLKESSRPAWVAESKDDAAQLKSSVE 2694
Query: 859 DNPMP----ELCKPIKPVETISSCHEEAP--------TKRMVDEVPEDLVSDLNTKTKDV 906
D P E+ +P ET SS EEAP ++ V + +L +L T + V
Sbjct: 2695 DLRSPVASTEISRPASAGETASSPIEEAPKDFAEFEQAEKAVLPLTIELKGNLPTLSSPV 2754
Query: 907 IGGHGEQFSVTKSLILNGIVRSLR------------SNLVVPEAPSN--------RLDEP 946
HG+ F T + + V S++ ++ + EAP + R + P
Sbjct: 2755 DVAHGD-FPQTSTPTSSPTVASVQPAELSKVDIEKTASSPIDEAPKSLIGCPAEERPESP 2813
Query: 947 TTDIKDVVEKDQLEKSEAPTSAVVES---------------------KNQLEKQGSTGLW 985
KD E + K + +VVES K+ +EK +
Sbjct: 2814 AESAKDAAESVEKSKDASRPPSVVESTKADSTKGDISPSPESVLEGPKDDVEKSKESSRP 2873
Query: 986 FTVFKHMVSDMTENNSKTSTDVADEKDSKYEDITTREISVSYE---------NTPVVIQD 1036
+V + D T++ S+ ++ V KD + + RE E ++ QD
Sbjct: 2874 PSVSASITGDSTKDVSRPASVVESVKDEHDKAESRRESIAKVESVIDEAGKSDSKSSSQD 2933
Query: 1037 MPFKDRAVVDAEVELRQIEAIKMVEDAI-------DSILPDTQPLP-------DNSTIDR 1082
+++ + ++ R+ ++ +D +S++ +P+P D+ R
Sbjct: 2934 SQKDEKSTLASKEASRRESVVESSKDDAEKSESRPESVIASGEPVPRESKSPLDSKDTSR 2993
Query: 1083 TGGIY------SEGLNQKEQKMESGNGIVEERKEESVSKEVNKPNQKLSRNWSNLKKVVL 1136
G + E Q+ ++ + + K++ S+E ++P+ + +K
Sbjct: 2994 PGSMVESVTAEDEKSEQQSRRESVAESVKADTKKDGKSQEASRPSSVDELLKDDDEKQES 3053
Query: 1137 LRRFI----KALEKVRKFNPREPRYLPLEPDSEDEKVQ-LRHQDMAERKGTEEWMLDYAL 1191
R+ I KA+ + +P + EP + + ++H++ + + D
Sbjct: 3054 RRQSITGSHKAMSTMGDESPMDKADKSKEPSRPESVAESIKHENTKDEESPLGSRRDSVA 3113
Query: 1192 RQVVSKLTPARKRKV-ELLVEAFETVVPTVK 1221
+ S +T K + V E+VV ++K
Sbjct: 3114 ESIKSDITKGEKSPLPSKEVSRPESVVGSIK 3144
Score = 35.0 bits (79), Expect = 1.2
Identities = 181/963 (18%), Positives = 355/963 (36%), Gaps = 178/963 (18%)
Query: 275 EGNNSYRNYSETDSDMDDEK--KNVIELVQKAFD--------EILLPEVEDLSSEGHSKS 324
EG ++ ++ SE D + + K V +++ A D ++ P E+LSS +
Sbjct: 1009 EGASARQDESELDVEPEQSKIKAEVQDIIATAKDIAKSRTEEQLAKPAEEELSSPTPEEK 1068
Query: 325 RGNETDEVLLEKSGGKIEERNTTTFTESPKEVPKMESKQKSWSHLKKVILLKRFVKALEK 384
+T + ++ G ++ P+E +F +E
Sbjct: 1069 LSKKTSDTKDDQIGAPVDVLPVNLQESLPEE---------------------KFSATIES 1107
Query: 385 VRNINSRRPR--QLPSDANFEAEKVLLNRQTSEERKKSEEWMLDYALQKVISKLAPAQRQ 442
P ++P D + + V+ + EE K++E ++ A + + + AP
Sbjct: 1108 GATTAPTLPEDERIPLD-QIKEDLVIEEKYVKEETKEAEAIVV--ATVQTLPEAAPLAID 1164
Query: 443 RVTLLVEAFETIRPVQDAENGPQTSATVESHANLIQSLDASSNHSKEEI---NDRRDFEV 499
T+L A + +AE + + E + + +A N ++ I ++ D V
Sbjct: 1165 --TILASATKDAPKDANAEALGELPDSGERVLPMKMTFEAQQNLLRDVIKTPDEVADLPV 1222
Query: 500 TERARNDKNMDACKKNDESATVKSTATKAVKFPVCDTGIMEEEVTAEGEYKVQEKSIVKE 559
E A ++ +K+ + A KS + K ++ E+E E E KV E + E
Sbjct: 1223 HEEA----DLGLYEKDSQDAGAKSISHKE------ESAKEEKETDDEKENKVGEIELGDE 1272
Query: 560 DLKHGTSTTDVPYGVQERDQKYI--------KKWHLMYKQAVLSNTGKYDNKLPVVGKDK 611
K S + VQE +K + K+ ++ V++ + D V KDK
Sbjct: 1273 PNKVDISHVLLKESVQEVAEKVVVIETTVEKKQEEIVEATTVITQENQEDLMEQV--KDK 1330
Query: 612 EGREQGDAVFNGGNNSSCHNYNETDSDMDEEKKNVIELVQKAFDEILLPETEDLSSDDRS 671
E EQ + +S + EK+ +K+ ET D++SDD
Sbjct: 1331 EEHEQ-----------------KIESGIITEKE-----AKKSASTPEEKETSDITSDDEL 1368
Query: 672 KSRSYGSDELLEKSEGEREEMNATSFTETPKEAKKTENKPKSWSHLKKLIMLKRFVKALD 731
++ + KS +RE+ + T +EA + E + K
Sbjct: 1369 PAQLADPTTVPPKSAKDREDTGSIESPPTIEEAIEVEVQAKQ------------------ 1410
Query: 732 KVRNINPRRPRELPSDANFEGEKVFLNRQTSEERKKSEEWMLDYALQKVISKLAPAQRQR 791
++P P +A + +++TS R +S + ++ SK +P +
Sbjct: 1411 -----EAQKPVPAPEEAIKTEKSPLASKETS--RPESATGSVKEDTEQTKSKKSPVPSRP 1463
Query: 792 VTLLIEAFETLRPIQDAENGLRSSATVESLENPLQSLDASSVLSAKTLLGKVSFSNDSTM 851
+ EA + P E R + ES+++ ++ AKT ++S++
Sbjct: 1464 ES---EAKDKKSPFASGE-ASRPESVAESVKDEAGKAESRRESIAKT------HKDESSL 1513
Query: 852 EFSDKASDNPMPELCKPIKPVETISSCHEEAPTKRMVDEVPEDLVSDLNTKTKDVIGGHG 911
+ K ++ L + IKP S E++ PE + K+K+
Sbjct: 1514 D-KAKEQESRRESLAESIKPE---SGIDEKSALASKEASRPESVTD----KSKE----PS 1561
Query: 912 EQFSVTKSLILNGIVRSLRSNLVVPEAPSNRLDEPTTDIKDVVEKDQLEKSEAPT--SAV 969
+ S+ +SL S + P PS P + ++ V KD+ EKS+ P+ ++
Sbjct: 1562 RRESIAESL----KAESTKDEKSAP--PSKEASRPGSVVESV--KDETEKSKEPSRRESI 1613
Query: 970 VESKNQLEKQGSTGLWFTVFKHMVSDMTENNSKTSTDVADEKDSKYEDI----------- 1018
ES + +V + + + S+ + +A ++ S+ E +
Sbjct: 1614 AESAKPPIEFREVSRPESVIDGIKDESAKPESRRDSPLASKEASRPESVLESVKDEPIKS 1673
Query: 1019 -----------TTREISVSYENTPVVIQDMPFKDRA---VVDA--EVELRQIEAIKMVED 1062
+ + S E +P+ +D+ + A V+DA E Q E++ D
Sbjct: 1674 TEKSRRESVAESFKADSTKDEKSPLTSKDISRPESAVENVMDAVGSAERSQPESVTASRD 1733
Query: 1063 AIDSILPDTQPLPDNSTIDRTGGIYSEGLNQKEQKMESGNGIVEERKEESVSKEVNK--- 1119
P++ + D+ + E + +E G ++ K VS E+ K
Sbjct: 1734 V---SRPESVAESEKDDTDKPESVV-ESVIPASDVVEIEKGAADKEKGVFVSLEIGKPDS 1789
Query: 1120 PNQKLSRNWSNLKKVVLLRRFIKALEKVRKFNPREPRYLPLEPDSEDEKVQLRHQDMAER 1179
P++ +SR ++ V R + E V + + + EP + KV+ +
Sbjct: 1790 PSEVISRPGPVVESVKPESRRESSTEIVLPCHAEDSK----EPSRPESKVECLKDESEVL 1845
Query: 1180 KGT 1182
KG+
Sbjct: 1846 KGS 1848
>USO1_YEAST (P25386) Intracellular protein transport protein USO1
Length = 1790
Score = 57.0 bits (136), Expect = 3e-07
Identities = 168/932 (18%), Positives = 377/932 (40%), Gaps = 96/932 (10%)
Query: 132 KSQKSTKKDGRSKQVGNARKGTQKTKTVHSEDGNSQQNVKNVSME----SSPFKPHDAPP 187
K KS K+D +K + + + + + + N + +++S E S F+ HD
Sbjct: 899 KETKSLKEDIAAK-ITEIKAINENLEEMKIQCNNLSKEKEHISKELVEYKSRFQSHDNLV 957
Query: 188 STVNECDTSTKDKHMVTDYEVLQKSSTQ-----EEPKPGSTTSVAYGVQERDQKYIKKWH 242
+ + E K K + +Y+ +Q + EE K S+ ++ + D +K +
Sbjct: 958 AKLTE-----KLKSLANNYKDMQAENESLIKAVEESKNESSIQLSNLQNKIDSMSQEKEN 1012
Query: 243 LMYKH-AVLSNTGKCDNKVPLVEKEKEGGEEDNEGNNSYRNYS----------ETDSDMD 291
+ ++ N + + +E+ KE E ++ ++S Y ET + +
Sbjct: 1013 FQIERGSIEKNIEQLKKTISDLEQTKE--EIISKSDSSKDEYESQISLLKEKLETATTAN 1070
Query: 292 DEKKNVIELVQKAFDEIL--LPEVEDLSSEGHSKSRGNETDEVLLEKSGGKIEERNTTTF 349
DE N I + K +E+ L ++L +E +K +E ++++ ++E
Sbjct: 1071 DENVNKISELTKTREELEAELAAYKNLKNELETKLETSEKALKEVKENEEHLKEEKIQLE 1130
Query: 350 TESPKEVPKMESKQKSWSHLKKVILLKRFVKALEKVRNINSRRPRQLPSDANFEAEKVLL 409
E+ + ++ S + + L+K + L+K + + RQ + + +++
Sbjct: 1131 KEATETKQQLNSLRANLESLEKEH--EDLAAQLKKYEEQIANKERQYNEEISQLNDEITS 1188
Query: 410 NRQTSEE-RKKSEEWMLDYALQKVISK----LAPAQRQRVTLLVEAFETIRPVQDAENGP 464
+Q +E +KK++E + K S+ L ++ + L ++ + +A
Sbjct: 1189 TQQENESIKKKNDELEGEVKAMKSTSEEQSNLKKSEIDALNLQIKELKKKNETNEASL-L 1247
Query: 465 QTSATVESHANLIQSLDASSNHSKEEINDRRDFEVTERARNDKNMDACKKND---ESATV 521
++ +VES I+ L N ++E+++ D +N K ++ K+++ E
Sbjct: 1248 ESIKSVESETVKIKELQDECNFKEKEVSELEDKLKASEDKNSKYLELQKESEKIKEELDA 1307
Query: 522 KSTATKAVKFPVCDTGIMEEEVTAEGEYKVQEKSIVKEDLKHGTSTTDVPYGVQERDQKY 581
K+T K + T + + + +E E +K+ +E + +Q ++Q +
Sbjct: 1308 KTTELKIQLEKI--TNLSKAKEKSESELSRLKKTSSEERKNAEEQLEKLKNEIQIKNQAF 1365
Query: 582 IKKWHLMYKQAVLSNTGKYDNKLPVVGKDKEGREQGDAVFNG----GNNSSCHNYNETDS 637
K+ L+ + + T +Y K+ + +D+ R Q + S + ++
Sbjct: 1366 EKERKLL-NEGSSTITQEYSEKINTL-EDELIRLQNENELKAKEIDNTRSELEKVSLSND 1423
Query: 638 DMDEEKKNVIELVQKAFDEILLPETEDLSSDDRSKSRSYGSDELLEKSEGEREEMNATSF 697
++ EEK+N I+ +Q DEIL + + +D++ S + LE +E++ A
Sbjct: 1424 ELLEEKQNTIKSLQ---DEILSYKDKITRNDEKLLSIERDNKRDLESL---KEQLRAAQE 1477
Query: 698 TETPKEAKKTENKPKSWSHLKKLIMLKRFVKALDKVRNINPRRPRELPSDANFEGEKVFL 757
++ E + + +S +L K +K L+ N + EK+
Sbjct: 1478 SKAKVEEGLKKLEEESSKEKAELEKSKEMMKKLESTIESNETELKSSMETIRKSDEKLEQ 1537
Query: 758 NRQTSEERKKSEEWMLDYALQKVISKLAPAQRQRVTLLIEAFETLRPIQDAENGLRSSAT 817
+++++EE K+ L + +IS++ +++ IE ++ I+ +S +
Sbjct: 1538 SKKSAEEDIKN----LQHEKSDLISRINESEKD-----IEELKSKLRIE-----AKSGSE 1583
Query: 818 VESLENPLQSLDASSVLSAKTLLGKVSFSNDSTMEFSDKASDNPMPELCKPIKPVETISS 877
+E+++ L + ++A+ S D E DK ++ I S
Sbjct: 1584 LETVKQELNNAQEKIRINAEENTVLKSKLEDIERELKDKQAE---------------IKS 1628
Query: 878 CHEEAP--TKRMVD-EVPEDLVSDLNTKTKDVIGGHGEQFSVTKS-LILNGIVRSLRSNL 933
EE T R+ + E D K+++ +F V KS L ++ + N
Sbjct: 1629 NQEEKELLTSRLKELEQELDSTQQKAQKSEEERRAEVRKFQVEKSQLDEKAMLLETKYND 1688
Query: 934 VVPEAPSNRLDEPTTDIKDVVEKDQLEKSEAPTSAVVESKNQLEKQGSTGLWFTVFKHMV 993
+V + + + DE T ++ ++EK + ++L++ +V
Sbjct: 1689 LVNKEQAWKRDEDTVKKTTDSQRQEIEKLAKELDNLKAENSKLKEANEDRSEIDDLMLLV 1748
Query: 994 SDMTENNSKTSTDV--------ADEKDSKYED 1017
+D+ E N+K + + +DE+D + +D
Sbjct: 1749 TDLDEKNAKYRSKLKDLGVEISSDEEDDEEDD 1780
Score = 51.2 bits (121), Expect = 2e-05
Identities = 190/1003 (18%), Positives = 370/1003 (35%), Gaps = 172/1003 (17%)
Query: 260 VPLVEKEKEGGEEDNEGNNSYRNYSETDSDMDDEKKN-------------VIELVQKAFD 306
+ L + KE E+ N+S+ + E S ++ E KN V+E K
Sbjct: 765 IALTNEHKELDEKYQILNSSHSSLKENFSILETELKNVRDSLDEMTQLRDVLETKDKENQ 824
Query: 307 EILLPEVEDLSSEGHS---KSRGNETDEVLLEKSGGKIEERNTTTFT---------ESPK 354
LL + + S +G ET +K+ I + F E+ K
Sbjct: 825 TALLEYKSTIHKQEDSIKTLEKGLETILSQKKKAEDGINKMGKDLFALSREMQAVEENCK 884
Query: 355 EVPKMESKQKSWSHLKKVILLKRFVKA-LEKVRNINSRRPRQLPSDANFEAEKVLLNRQT 413
+ K E + + +H K+ LK + A + +++ IN N EK ++++
Sbjct: 885 NLQK-EKDKSNVNHQKETKSLKEDIAAKITEIKAINENLEEMKIQCNNLSKEKEHISKEL 943
Query: 414 SEERKKSEEWMLDYALQKVISKLAPAQRQRVTLLVEAFETIRPVQDAENGPQTSATVESH 473
E + + + D + K+ KL + E I+ V++++N ++S + +
Sbjct: 944 VEYKSRFQSH--DNLVAKLTEKLKSLANNYKDMQAENESLIKAVEESKN--ESSIQLSNL 999
Query: 474 ANLIQSLDASSNH------------------------SKEEINDRRD-----FEVTERAR 504
N I S+ + +KEEI + D +E
Sbjct: 1000 QNKIDSMSQEKENFQIERGSIEKNIEQLKKTISDLEQTKEEIISKSDSSKDEYESQISLL 1059
Query: 505 NDKNMDACKKNDESATVKSTATKAVKFPVCDTGI-----------MEEEVTAEGEYKVQE 553
+K A NDE+ S TK + + +E A E K E
Sbjct: 1060 KEKLETATTANDENVNKISELTKTREELEAELAAYKNLKNELETKLETSEKALKEVKENE 1119
Query: 554 KSIVKEDLKHGTSTTDVPYGVQ---------ERDQKYIKKWHLMYKQAVLSNTGKYDNKL 604
+ + +E ++ T+ + E++ + + Y++ + + +Y+ ++
Sbjct: 1120 EHLKEEKIQLEKEATETKQQLNSLRANLESLEKEHEDLAAQLKKYEEQIANKERQYNEEI 1179
Query: 605 PVVGKDKEGREQGDAVFNGGNN---SSCHNYNETDSDMDEEKKNVIELVQKAFDEILLPE 661
+ + +Q + N+ T + KK+ I+ + E L +
Sbjct: 1180 SQLNDEITSTQQENESIKKKNDELEGEVKAMKSTSEEQSNLKKSEIDALNLQIKE-LKKK 1238
Query: 662 TEDLSSDDRSKSRSYGSDELLEKSEGEREEMNATSFTETPKEAKKTENKPKSWSHL-KKL 720
E + +S S+ + K + +E + K +E+K + L K+
Sbjct: 1239 NETNEASLLESIKSVESETVKIKELQDECNFKEKEVSELEDKLKASEDKNSKYLELQKES 1298
Query: 721 IMLKRFVKA--------LDKVRNINPRRPRELPSDANFEGEKVFLNRQTSEERKKSEEWM 772
+K + A L+K+ N++ + + E E L + +SEERK +EE
Sbjct: 1299 EKIKEELDAKTTELKIQLEKITNLSKAKEKS-------ESELSRLKKTSSEERKNAEE-Q 1350
Query: 773 LDYALQKVISKLAPAQRQRVTLLIEAFETLRPIQDAENGLRSSATVESLENPLQSLDASS 832
L+ ++ K +++R LL E T+ S + +LE+ L L +
Sbjct: 1351 LEKLKNEIQIKNQAFEKER-KLLNEGSSTITQ--------EYSEKINTLEDELIRLQNEN 1401
Query: 833 VLSAKTL------LGKVSFSNDSTMEFSDKASDNPMPELC----KPIKPVETISSCHEEA 882
L AK + L KVS SND +E + E+ K + E + S E
Sbjct: 1402 ELKAKEIDNTRSELEKVSLSNDELLEEKQNTIKSLQDEILSYKDKITRNDEKLLSI--ER 1459
Query: 883 PTKRMVDEVPEDLVSDLNTKTKDVIG-------GHGEQFSVTKSLILNGIVRS------- 928
KR ++ + E L + +K K G E+ + KS + + S
Sbjct: 1460 DNKRDLESLKEQLRAAQESKAKVEEGLKKLEEESSKEKAELEKSKEMMKKLESTIESNET 1519
Query: 929 -LRSNLVVPEAPSNRLDEPTTDIKDVVEKDQLEKSEAPTSAVVESKNQLEKQGSTGLWFT 987
L+S++ +L++ ++ ++ Q EKS+ S + ES+ +E+
Sbjct: 1520 ELKSSMETIRKSDEKLEQSKKSAEEDIKNLQHEKSDL-ISRINESEKDIEE--------- 1569
Query: 988 VFKHMVSDMTENNSKTSTDVADEKDSKYEDITTREISVSYENTPVVIQDMPFKDRAVVDA 1047
K + ++ S+ T V E ++ E +I ++ E V+ + +R + D
Sbjct: 1570 -LKSKLRIEAKSGSELET-VKQELNNAQE-----KIRINAEENTVLKSKLEDIERELKDK 1622
Query: 1048 EVELRQ--------IEAIKMVEDAIDSILPDTQPLPDNSTID-RTGGIYSEGLNQKEQKM 1098
+ E++ +K +E +DS Q + + R + L++K +
Sbjct: 1623 QAEIKSNQEEKELLTSRLKELEQELDSTQQKAQKSEEERRAEVRKFQVEKSQLDEKAMLL 1682
Query: 1099 ESG-NGIVE-----ERKEESVSKEVNKPNQ---KLSRNWSNLK 1132
E+ N +V +R E++V K + Q KL++ NLK
Sbjct: 1683 ETKYNDLVNKEQAWKRDEDTVKKTTDSQRQEIEKLAKELDNLK 1725
>ATRX_CAEEL (Q9U7E0) Transcriptional regulator ATRX homolog
(X-linked nuclear protein-1)
Length = 1359
Score = 52.4 bits (124), Expect = 8e-06
Identities = 74/334 (22%), Positives = 139/334 (41%), Gaps = 40/334 (11%)
Query: 120 LKRFVSMRRRQLKSQKSTKKDGRSKQVGNARKGTQKTKTVHSEDGNSQQNVKNVSMESSP 179
+ R + R++ ++QK +K R + ++ +K K SE+ + + ++ S
Sbjct: 23 MARQIENERKEKRAQKLKEKREREGKPPPKKRPAKKRKASSSEEDDDDEE-ESPRKSSKK 81
Query: 180 FKPHDAPPSTVNECDTSTKDKHMVTDYEVLQKSSTQEEPKPGSTTSVAY---GVQERDQK 236
+ S +E D K + +V QK +E+ K TTS + +ER+QK
Sbjct: 82 SRKRAKSESESDESDEEEDRKKSKSKKKVDQKK--KEKSKKKRTTSSSEDEDSDEEREQK 139
Query: 237 YIKKWHLMYKHAVLSNTGKCD----------NKVPLVEKEKEGGEEDNEGNNSYRN---- 282
KK K ++ + + NK V+K E EE +E +
Sbjct: 140 SKKKSKKTKKQTSSESSEESEEERKVKKSKKNKEKSVKKRAETSEESDEDEKPSKKSKKG 199
Query: 283 -----YSETDSDMDDEK---------KNVIELVQKAFDEILLPEVEDLSSEGHSKSRGNE 328
SE++S+ +DEK K V++ ++ DE PE + SK+ E
Sbjct: 200 LKKKAKSESESESEDEKEVKKSKKKSKKVVKKESESEDE--APEKKKTEKRKRSKTSSEE 257
Query: 329 TDEVLLEKSGGKIEERNTT--TFTESPKEVPKMESKQKSWSHLKKVILLKRFVKALEKVR 386
+ E EKS + EE+ ++ + P V K+ S ++S +V+ K+ A+ +
Sbjct: 258 SSE--SEKSDEEEEEKESSPKPKKKKPLAVKKLSSDEESEESDVEVLPQKKKRGAVTLIS 315
Query: 387 NINSRRPRQLPSDANFEAEKVLLNRQTSEERKKS 420
+ + ++ S+A+ EKV + +E +S
Sbjct: 316 DSEDEKDQKSESEASDVEEKVSKKKAKKQESSES 349
Score = 52.4 bits (124), Expect = 8e-06
Identities = 57/236 (24%), Positives = 105/236 (44%), Gaps = 20/236 (8%)
Query: 126 MRRRQLKSQKSTKKDGRSKQVGNARKGTQK---TKTVHSEDGNSQQNVKNVSMESSPFKP 182
+++ + KS+K KK+ S+ +K T+K +KT E S+++ + + S KP
Sbjct: 218 VKKSKKKSKKVVKKESESEDEAPEKKKTEKRKRSKTSSEESSESEKSDEEEEEKESSPKP 277
Query: 183 HDAPPSTVNECDTSTKDKHMVTDYEVLQKS---------STQEEPKPGSTTSVAYGVQER 233
P V + S+ ++ +D EVL + S E+ K + S A V+E+
Sbjct: 278 KKKKPLAVKK--LSSDEESEESDVEVLPQKKKRGAVTLISDSEDEKDQKSESEASDVEEK 335
Query: 234 DQKYIKKWHLMYKHAVLSNTGKCDNKVPLVEKEKEGGEEDNEG---NNSYRNYSETDSD- 289
K KK S++ + V K+KE E+ +G ++S D++
Sbjct: 336 VSK--KKAKKQESSESGSDSSEGSITVNRKSKKKEKPEKKKKGIIMDSSKLQKETIDAER 393
Query: 290 MDDEKKNVIELVQKAFDEILLPEVEDLSSEGHSKSRGNETDEVLLEKSGGKIEERN 345
+ E++ +E QK F+ I+L E EDL+ S + V+L+ ++E +
Sbjct: 394 AEKERRKRLEKKQKEFNGIVLEEGEDLTEMLTGTSSQRKLKSVVLDPDSSTVDEES 449
Score = 50.8 bits (120), Expect = 2e-05
Identities = 78/416 (18%), Positives = 172/416 (40%), Gaps = 49/416 (11%)
Query: 264 EKEKEGGEEDNEGNNSYRNYSETDSDMDDEKKNVIELVQKAFDEILLPEVEDLSSEGHSK 323
++E+EG + R S ++ D DDE+++ + +K+ D S E +
Sbjct: 42 KREREGKPPPKKRPAKKRKASSSEEDDDDEEESPRKSSKKSRKRAKSESESDESDEEEDR 101
Query: 324 SRGNETDEVLLEKSGGKIEERNTTTFTESPKEVPKMESKQKSWSHLKKVILLKRFVKALE 383
+ +V +K K +++ TT+ +E + E K K S K+ K
Sbjct: 102 KKSKSKKKV-DQKKKEKSKKKRTTSSSEDEDSDEEREQKSKKKS--------KKTKKQTS 152
Query: 384 KVRNINSRRPRQLPSDANFEAEKVLLNRQTSEERKKSEEWMLDYALQKVISKLAPAQRQR 443
+ S R++ + + V +TSEE + E+ P+++ +
Sbjct: 153 SESSEESEEERKVKKSKKNKEKSVKKRAETSEESDEDEK---------------PSKKSK 197
Query: 444 VTLLVEAFETIRPVQDAENGPQTSATVESHANLIQSLDASSNHSKEEINDRRDFEVTERA 503
L +A ++E+ + V+ + + + S++E +++ E +R+
Sbjct: 198 KGLKKKA------KSESESESEDEKEVKKSKKKSKKVVKKESESEDEAPEKKKTEKRKRS 251
Query: 504 R-NDKNMDACKKNDESATVKSTATKAVKFPVCDTGIMEEEVTAEGEYKVQEKSIVKEDLK 562
+ + + +K+DE K ++ K P + ++++++ E + + ++ + K
Sbjct: 252 KTSSEESSESEKSDEEEEEKESSPK----PKKKKPLAVKKLSSDEESEESDVEVLPQKKK 307
Query: 563 HGTSTTDVPYGVQERDQK----------YIKKWHLMYKQAVLSNTGKYDNKLPVVGKDKE 612
G + T + E+DQK + K +++ S + + + V K K+
Sbjct: 308 RG-AVTLISDSEDEKDQKSESEASDVEEKVSKKKAKKQESSESGSDSSEGSITVNRKSKK 366
Query: 613 GREQGDAVFNGGNNSSCHNYNET-DSD-MDEEKKNVIELVQKAFDEILLPETEDLS 666
+E+ + G S ET D++ ++E++ +E QK F+ I+L E EDL+
Sbjct: 367 -KEKPEKKKKGIIMDSSKLQKETIDAERAEKERRKRLEKKQKEFNGIVLEEGEDLT 421
Score = 38.1 bits (87), Expect = 0.15
Identities = 76/353 (21%), Positives = 145/353 (40%), Gaps = 72/353 (20%)
Query: 633 NETDSDMDEE--KKNVIELVQKAFDEILLPETEDLSSDDRSKSRSYGSDELLEKSEGERE 690
+E D D +EE +K+ + ++A E E+++ +DR KS+S + +K + +++
Sbjct: 64 SEEDDDDEEESPRKSSKKSRKRAKSESESDESDE--EEDRKKSKSKKKVDQKKKEKSKKK 121
Query: 691 EMNATSFTETPKEAKKTENKPKSWSHLKKLIMLKRFVKALDKVRNINPRRPRELPSDANF 750
++S E E ++ ++K KS + ++ S+++
Sbjct: 122 RTTSSSEDEDSDEEREQKSKKKS------------------------KKTKKQTSSESSE 157
Query: 751 EGEKVFLNRQTSEERKKSEEWMLDYALQKVISKLAPAQRQRVTLLIEAFETLRPIQDAEN 810
E E+ R+ + +K E+ + ++R E+ E +P + ++
Sbjct: 158 ESEE---ERKVKKSKKNKEK----------------SVKKRAETSEESDEDEKPSKKSKK 198
Query: 811 GLRSSATVESLENPLQSLDASSVLSAKTLLGKVSFSNDSTMEFSDKASDNPMPELCKPIK 870
GL+ A ES +S D V +K KV + S++ PE K K
Sbjct: 199 GLKKKAKSES---ESESEDEKEVKKSKKKSKKV--------VKKESESEDEAPEKKKTEK 247
Query: 871 PVETISSCHEEAPTKRMVDEVPEDLVSDLNTKTKDVIGGHGEQFSVTKSLILNGIVRSLR 930
+ +S E + +++ DE E+ S K K + +V K L+ S
Sbjct: 248 RKRSKTSSEESSESEKS-DEEEEEKESSPKPKKK-------KPLAVKK---LSSDEESEE 296
Query: 931 SNL-VVPEAPSNRLDEPTTDIKDVVEKDQLEKSEAPTSAVVESKNQLEKQGST 982
S++ V+P+ +D +D EKDQ +SEA SK + +KQ S+
Sbjct: 297 SDVEVLPQKKKRGAVTLISDSED--EKDQKSESEASDVEEKVSKKKAKKQESS 347
>ANRZ_HUMAN (Q6UB98) Ankyrin repeat domain protein 12 (Ankyrin
repeat-containing cofactor-2) (GAC-1 protein)
Length = 2062
Score = 50.4 bits (119), Expect = 3e-05
Identities = 180/898 (20%), Positives = 308/898 (34%), Gaps = 187/898 (20%)
Query: 128 RRQLKSQKSTKKDGRSKQVGNARKGTQKTKTVHSEDGNSQQNVKNVSMESSPFKPHDAPP 187
+R+LK+Q K++ KQ ++ T+ T + + + + F P D
Sbjct: 473 KRKLKNQNKNKENQELKQEKEGKENTRITNLTVNTGLDCSEKTREEGNFRKSFSPKDDTS 532
Query: 188 STVNECDTSTKDKHMVTDYEVLQKSSTQEEPK----PGS--------------------- 222
+ T KH E QE K PGS
Sbjct: 533 LHLFHISTGKSPKHSCGLSEKQSTPLKQEHTKTCLSPGSSEMSLQPDLVRYDNTESEFLP 592
Query: 223 -TTSVAYGVQERDQKYIKKWHLMYKH----------------------AVLSNTGKCDNK 259
++SV + K+ K +HL + + GK K
Sbjct: 593 ESSSVKSCKHKEKSKHQKDFHLEFGEKSNAKIKDEDHSPTFENSDCTLKKMDKEGKTLKK 652
Query: 260 VPLVEKEKEGGEEDNEGNNSYRNYSETDSDMDDEKKNVIELVQKAFDEILLPEVEDLSSE 319
L KE+E + E Y DS + ++ FD E S E
Sbjct: 653 HKLKHKEREKEKHKKEIEGEKEKYKTKDSAKELQR-------SVEFDREFWKENFFKSDE 705
Query: 320 GHSKSRGNETDEVLLEKSGGKIEERNTTTFTESPKEVPKMESKQKSWSHLKKVILLKRFV 379
E + + LEK K+E+ + K V K + ++ +KK K F
Sbjct: 706 TEDLFLNMEHESLTLEKK-SKLEKNIKDDKSTKEKHVSKERNFKEERDKIKKE-SEKSFR 763
Query: 380 KALEKVRNINSRRPRQLPSDANFE---------AEKVLLNRQTSEERKKSEEWMLDYALQ 430
+ EK++++ R +P+D + E E + L+ E + +E + + +
Sbjct: 764 E--EKIKDLKEER-ENIPTDKDSEFTSLGMSAIEESIGLHLVEKEIDIEKQEKHIKESKE 820
Query: 431 KVISKLAPAQRQRVTLLVEAFETIRPVQDAENGPQTSATVESHANLIQSLDASSNHSKEE 490
K + ++ + + FE + ++ + + + I+ D +H E+
Sbjct: 821 KPEKRSQIKEKDIEKMERKTFEKEKKIKHEHKSEKDKLDLSECVDKIKEKDKLYSHHTEK 880
Query: 491 INDRRDFEVTERARNDKNMDACKKNDESATVKSTATKAVKFPVCDTGIMEEEVTAEGEYK 550
+ + KN A KK D+
Sbjct: 881 CH--------KEGEKSKNTAAIKKTDD--------------------------------- 899
Query: 551 VQEKSIVKEDLKHGTSTTDVPYGVQERDQKYIKKWHLMYKQAVLSNTGKYDNKLPVVGKD 610
+EKS K D KH + +ER K+ HLM K+ S+ +Y GK+
Sbjct: 900 -REKSREKMDRKHDKEKPE-----KERHLAESKEKHLMEKKNKQSDNSEYSKS--EKGKN 951
Query: 611 KEGREQGDAVFNGGNNSSCHNYNETDSDMDEEKKNVIELVQKAFDEILLPETEDLSSDDR 670
KE + D + S + N + EEKK+ I KA E + LS ++
Sbjct: 952 KEKDRELDKKEKSRDKESINITN--SKHIQEEKKSSIVDGNKAQHE------KPLSLKEK 1003
Query: 671 SKSRSYGSDELLEKSEGEREEMNATSFTETPKEAKKTENKPKSWSHLKKLIMLKRFVKAL 730
+K DE L+ +G+ ++ + + K +K K + L+ LK
Sbjct: 1004 TK------DEPLKTPDGKEKDKK-----DKDIDRYKERDKHKDKIQINSLLKLK------ 1046
Query: 731 DKVRNINPRRPRELPSDANFE-GEKVFLN---RQTSEERKKS------EEWMLDYALQKV 780
+ +P+ P+ + EK +N QTS ER S E+W + +K+
Sbjct: 1047 ---SEADKPKPKSSPASKDTRPKEKRLVNDDLMQTSFERMLSLKDLEIEQWHKKHK-EKI 1102
Query: 781 ISKLAPAQRQRVTLLIEAFETLR----PIQDAENGLRSSATVE-------------SLEN 823
K R R L ++ + + P + L S + E ++ N
Sbjct: 1103 KQKEKERLRNRNCLELKIKDKEKTKHTPTESKNKELTRSKSSEVTDAYTKEKQPKDAVSN 1162
Query: 824 PLQSLDASSVLSAKTLLGKVSFSNDSTMEFSDKASDNPMPEL----CKPIKPVETISSCH 879
QS+D +V++ LGK SF +D+++ S + S+N P L I + SCH
Sbjct: 1163 RSQSVDTKNVMT----LGKSSFVSDNSLNRSPR-SENEKPGLSSRSVSMISVASSEDSCH 1217
Query: 880 EEAPTKRMVDEVPEDLVSDLNTKTKDVIGGHGEQFSVTKSLILNGIVRSLRSNLVVPE 937
T R E D + L + + S+ KS L+ R L S +PE
Sbjct: 1218 TTVTTPRPPVEYDSDFM--LESSESQMSFSQSPFLSIAKSPALH--ERELDSLADLPE 1271
>RA50_PYRAB (Q9UZC8) DNA double-strand break repair rad50 ATPase
Length = 880
Score = 49.3 bits (116), Expect = 6e-05
Identities = 120/564 (21%), Positives = 227/564 (39%), Gaps = 86/564 (15%)
Query: 289 DMDDEKKNVIEL--VQKAFDEILLPEVEDLSSEGHSKSRGNETDEVLLEKSGGKIEERNT 346
+++ ++NV EL ++ E+ + +VE L + +G E V +E+S IEE+
Sbjct: 226 ELEKVRENVKELESIKGKISELKI-QVEKLKG----RKKGLEEKIVQIERS---IEEKKA 277
Query: 347 --TTFTESPKEVPKMESKQKSWSHLKKVILLKRFVKALEKVRNINSRRPRQLPSD-ANFE 403
+ E K++PK++ K+K + LK R+ + R+L + + +E
Sbjct: 278 KISELEEIVKDIPKLQEKEKEYRKLKGF-------------RDEYESKLRRLEKELSKWE 324
Query: 404 AEKVLLNRQTSEERKKSEEWMLDYALQKVISKLAPAQRQRVTLLVEAFETIRP-VQDAEN 462
+E + E KK E A R++++ + + E ++P V++ E+
Sbjct: 325 SELKAIEEVIKEGEKKKER--------------AEEIREKLSEIEKRLEELKPYVEELED 370
Query: 463 GPQTSATVESHANLIQSLDASSNHSKEEINDRRDFEVTERARNDKNMDAC---KKNDESA 519
Q +E ++ L K E ++ E+ E + +KN+
Sbjct: 371 AKQVQKQIERLKARLKGLSPGEVIEKLESLEKERTEIEEAIKEITTRIGQMEQEKNERMK 430
Query: 520 TVKSTATKAVKFPVCDTGIMEEEVTAEGEYKVQEKSIVKEDLKHGTSTTDVPYGVQERDQ 579
++ K PVC + EE E E ++E+LK TT+ ++ +
Sbjct: 431 AIEELRKAKGKCPVCGRELTEEHKKELMERYTLEIKKIEEELKR---TTEEERKLRVNLR 487
Query: 580 KY-IKKWHLMYKQAVLSNTGKYDNKLPVVGKDKEGREQGDAVFNGGNNSSCHNYNETDSD 638
K IK + + + ++KL G + E EQ + F G N +N+ +
Sbjct: 488 KLEIKLREFSVMRDIAEQIKELESKLK--GFNLEELEQKEREFEGLN----EEFNKLKGE 541
Query: 639 M-----DEEKKNVIELVQKAFDEILLPETEDLSSDDRS-KSRSYGSDELLEKSEGEREEM 692
+ D ++ +E +K +E + E+L + R + + S E L E EE
Sbjct: 542 LLGLERDLKRIKALEGRRKLIEEKVRKAKEELENLHRQLRELGFESVEELNLRIQELEE- 600
Query: 693 NATSFTETPKEAKKTEN---KPKSWSHLKKLIMLKRFVKALDKVRNINPRRPRELPSDAN 749
F + EAKK+E+ + K+ +K + + F D I + + ++
Sbjct: 601 ----FHDKYVEAKKSESELRELKNKLEKEKTELDQAFEMLADVENEIEEKEAKLKDLESK 656
Query: 750 FEGEK--------VFLNRQTS------EERKKSEEWMLDYALQKVISKLAPAQRQRVTLL 795
F E+ V L R+ S EE KKS E + L+K+ K +R++ L
Sbjct: 657 FNEEEYEEKRERLVKLEREVSSLTARLEELKKSVE-QIKATLRKL--KEEKEEREKAKLE 713
Query: 796 IEAFE-TLRPIQDAENGLRSSATV 818
I+ E L ++D ++ T+
Sbjct: 714 IKKLEKALSKVEDLRKKIKDYKTL 737
>KTN1_HUMAN (Q86UP2) Kinectin (Kinesin receptor) (CG-1 antigen)
Length = 1357
Score = 49.3 bits (116), Expect = 6e-05
Identities = 135/679 (19%), Positives = 267/679 (38%), Gaps = 69/679 (10%)
Query: 209 LQKSSTQEEPKPGSTTSVAYGVQERDQKYIKKWHLMYKHAVLSNTGKCDNKVPLVEKEKE 268
LQ+ Q++ + T + +QE ++++ + + K + D + V KE
Sbjct: 469 LQQEEVQKKNAEQAATQLKVQLQEAERRWEEVQSYIRKRTAEHEAAQQDLQSKFVAKE-- 526
Query: 269 GGEEDNEGNNSYRNYSET---DSDMDDEKKNVIELVQKAF--DEILLPEVEDLSSEG--- 320
NE + + ++T ++ ++E QK +E L +V+D+ +
Sbjct: 527 -----NEVQSLHSKLTDTLVSKQQLEQRLMQLMESEQKRVNKEESLQMQVQDILEQNEAL 581
Query: 321 -------HSKSRGNETDEVLLEKSGGKIEERNTT---TFTESPKEVPKMESKQKSWSHLK 370
HS+ + VL E+ I E++ T E ++ SK++ ++
Sbjct: 582 KAQIQQFHSQIAAQTSASVLAEELHKVIAEKDKQIKQTEDSLASERDRLTSKEEELKDIQ 641
Query: 371 KV-ILLKRFVKALEKVRNINSRRPRQLPS---DANFEAEKV-LLNRQTSEE-RKKSEEWM 424
+ LLK V+ L+ + N + +L + +K+ LL Q E K EE+
Sbjct: 642 NMNFLLKAEVQKLQALANEQAAAAHELEKMQQSVYVKDDKIRLLEEQLQHEISNKMEEFK 701
Query: 425 L----DYALQKVISKLAP---------AQRQRVTLLVEAFETIRPVQDA-ENGPQTSATV 470
+ + AL+ + KL Q + E E ++ V++ E G AT
Sbjct: 702 ILNDQNKALKSEVQKLQTLVSEQPNKDVVEQMEKCIQEKDEKLKTVEELLETGLIQVATK 761
Query: 471 ESHANLIQSLDASSNHSKEEINDRRDFEVTERARNDKNMDACKKNDESATVKSTATKAVK 530
E N I++ ++S +++ +++ +V+ + ++ + D +A
Sbjct: 762 EEELNAIRTENSSLTKEVQDLKAKQNDQVSFASLVEELKKVIHEKDGKIKSVEELLEAEL 821
Query: 531 FPVCDTGIMEEEVTAEGEYKVQEKSIVKEDLKHGTSTTDVPYGVQ-----ERDQKYIKKW 585
V + +++ E + +E V+ + S T +Q + +Q K
Sbjct: 822 LKVANKEKTVQDLKQEIKALKEEIGNVQLEKAQQLSITSKVQELQNLLKGKEEQMNTMKA 881
Query: 586 HLMYKQAVLSNTGKYDNKLPVVGKDKEGREQGDAVFNGGNNSSCHNYNETDSDMDEEKKN 645
L K+ L+NTGK+ L + + Q A N SS + E + + E++
Sbjct: 882 VLEEKEKDLANTGKWLQDLQEENESLKAHVQEVAQHNLKEASSASQFEELEIVLKEKENE 941
Query: 646 VIELVQKAFDEILLPETEDLSSDDRSKSRSYGSDELLEKSEGEREEMN---ATSFTETPK 702
+ K + +L DLSS + ++L + + ++ N A+SF +
Sbjct: 942 L-----KRLEAMLKERESDLSSKTQLLQDVQDENKLFKSQIEQLKQQNYQQASSFPPHEE 996
Query: 703 EAKKTENKPKSWSHL-KKLIMLKRFVKALDKVRNINPRRPRELPSDANFEGEKVFLNR-- 759
K + K S L +L LK V+ K +N + R +A EK+ ++
Sbjct: 997 LLKVISEREKEISGLWNELDSLKDAVEHQRK-KNNDLREKNWEAMEALASTEKMLQDKVN 1055
Query: 760 QTSEERKKSEEWMLDYALQKVISKLAPAQRQRVTL----LIEAFETLRPIQDAENGLRSS 815
+TS+ER++ E ++ ++V+ KL P L + FE + ++ G S
Sbjct: 1056 KTSKERQQQVE-AVELEAKEVLKKLFPKVSVPSNLSYGEWLHGFE--KKAKECMAGTSGS 1112
Query: 816 ATVESLENPLQSLDASSVL 834
V+ LE+ L+ D L
Sbjct: 1113 EEVKVLEHKLKEADEMHTL 1131
>SBCC_CLOAB (Q97FK1) Nuclease sbcCD subunit C
Length = 1163
Score = 48.1 bits (113), Expect = 1e-04
Identities = 100/463 (21%), Positives = 182/463 (38%), Gaps = 100/463 (21%)
Query: 301 VQKAFDEILLPEVEDLSSE--GHSKSRGNETDEVLLEKSGGKIEERNTTTFTESP----- 353
+++ F E+ L +E L SE G K R E +E+++ ++ K+EE+N ES
Sbjct: 585 IKEGFKEVDLKALETLKSELEGFEKKRKFENEEIVMCEASIKVEEKNIKKLNESINNLGE 644
Query: 354 --KEVPKMESKQKSWSHLKKVILLKRFVKALEKVRNINSRRPRQLPSDANFEAEKVLLNR 411
KEV +ES +K +++LK EKV F EK+ L+
Sbjct: 645 EFKEV-SLESMEKKFNYLK------------EKVN--------------KFNLEKIQLDD 677
Query: 412 QTSEERKKSEEWMLDYALQKVISKLAPAQRQRVTLLVEAFETIRPVQDA----ENGPQTS 467
+ ++S + ++Y +K + K +++ V L E E I+ + EN
Sbjct: 678 NIKDLSERSNKIEVEYQKEKTVEK--QCEKRIVDLKSELEEAIKEFNEVAYTIENLKAEL 735
Query: 468 ATVESHANLIQSLDAS--SNHSKEEINDRRDFEVTERARNDKNMDACKKNDESATVKSTA 525
+ + + L+ ++ EI D R+ ++ MD C +
Sbjct: 736 KIQDFKFEMKEILEKERVRVEAEGEIKDLRNLLNIRHTEKEQLMDKCSR----------- 784
Query: 526 TKAVKFPVCDTGIMEEEVTAEGEYKVQEKSIVK--EDLKHGTSTTDVPYGVQERDQKYIK 583
+ EE + E K ++K I + E +K+ D Y ++E+ + IK
Sbjct: 785 ------------LKEELSKNKAELKEKDKIINEKIELIKNKVGVLDNLYELKEKIEGTIK 832
Query: 584 KWHLMYKQAVLSNTGKYDNKLPVVGKDKEGREQGDAVFNGGNNSSCHNYNETDSD----- 638
K Y D K+ + +DK + + + N SS + D D
Sbjct: 833 KIEEQYNLC--------DKKMNEI-EDKYRKCSDEIIKYHSNLSSLKDRKVNDIDKLNKI 883
Query: 639 MDEEKKNVIELVQKAFDEILLPETEDLSSDDRSK-----SRSYGSDELLEKSEGEREEMN 693
+ EEK E ++KA + L + +L D K S+ G+ E+L K R ++
Sbjct: 884 LMEEK---FENIEKAKENYLNDKEINLLKSDVEKYKNELSKVNGAVEVLSKKLKNR-KLT 939
Query: 694 ATSFTETPKEAKKTENKPKSWSHLKKLIMLKRFVKALDKVRNI 736
+ E + +K K+ + +R +K ++V+NI
Sbjct: 940 EEKWIEIQNNRVEKASKAKA--------LQERSIKLEEEVKNI 974
>MFP1_ARATH (Q9LW85) MAR binding filament-like protein 1
Length = 727
Score = 48.1 bits (113), Expect = 1e-04
Identities = 68/279 (24%), Positives = 117/279 (41%), Gaps = 41/279 (14%)
Query: 817 TVESLENPLQSLDASSVLSAKTLLGKVSFSNDSTMEFSDKASDNPMPELCKPIKPVETIS 876
T+ESL+N L+ + + VL K K+ + + +KA + E +S
Sbjct: 158 TIESLKNQLKDRERALVLKEKDFEAKLQHEQEERKKEVEKAKE-------------EQLS 204
Query: 877 SCHEEAPTKRMVDEVPEDLVSD--LNTKTKDVIGGHGEQFSVTKSLILNG-----IVRSL 929
++ K +V E+ +L S+ L K KD I S+ SL G + L
Sbjct: 205 LINQLNSAKDLVTELGRELSSEKKLCEKLKDQIE------SLENSLSKAGEDKEALETKL 258
Query: 930 RSNLVVPEAPSNRLDEPTTDIKDVVEKDQ-LEKSEAPTSAVVESKNQLEKQGSTGLWFTV 988
R L + E +R++ + ++KD EK Q S A A ++ N + Q S L
Sbjct: 259 REKLDLVEGLQDRINLLSLELKDSEEKAQRFNASLAKKEAELKELNSIYTQTSRDL--AE 316
Query: 989 FKHMVSDMTENNSKTSTDVADEKDSKYEDITTREISVSYENTPVVIQ-DMPFKD------ 1041
K + E +T +++ D K+S E++ TR ++ E + + D KD
Sbjct: 317 AKLEIKQQKEELIRTQSEL-DSKNSAIEELNTRITTLVAEKESYIQKLDSISKDYSALKL 375
Query: 1042 ----RAVVDAEVELRQIEAIKMVEDAIDSILPDTQPLPD 1076
+A DAE+ R+ + I+ + + +D L D D
Sbjct: 376 TSETQAAADAELISRKEQEIQQLNENLDRALDDVNKSKD 414
>CYL2_HUMAN (Q14093) Cylicin II (Multiple-band polypeptide II)
Length = 348
Score = 47.0 bits (110), Expect = 3e-04
Identities = 66/285 (23%), Positives = 118/285 (41%), Gaps = 39/285 (13%)
Query: 123 FVSMRRRQLKSQKSTKKDGRSKQVGNARKGTQKTKTVHSEDGNSQQNVKNVSMESSPFKP 182
+++ RR+ LK ++ + D ++ ++G +KG KT + D S+ +K +S K
Sbjct: 91 YLAARRQPLKPTRTVEVDSKAAEIG--KKGEDKTTQKDTTDSESE--LKQGKKDSK--KG 144
Query: 183 HDAPPSTVNECDTSTKDKHMVTDYEVLQKSSTQEEPKPGSTTSVAYGVQERDQKYIKKWH 242
D + D K D E + S+T+ E + G ++D K KK
Sbjct: 145 KDIEKGKEEKLDAKKDSKKGKKDAEKGKDSATESEDEKGGA--------KKDNKKDKKD- 195
Query: 243 LMYKHAVLSNTGKCDNKVPLVEKEKEGGEEDNEGNNSYRNYSETDSDMDDEKKNVIELVQ 302
SN GK + E EK G E+D++ D K + IEL
Sbjct: 196 --------SNKGK--DSATESEGEKGGTEKDSKKGKK---------DSKKGKDSAIELQA 236
Query: 303 KAFDEILLPEVEDLSSEG-HSKSRGNETDEVLLEKSGGKIEERNTTTFTESPKEVPKMES 361
DE + + +++G SK + E+ K G K +++ ++T ++S +V K ES
Sbjct: 237 VKADEKKDEDGKKDANKGDESKDAKKDAKEI---KKGKKDKKKPSSTDSDSKDDV-KKES 292
Query: 362 KQKSWSHLKKVILLKRFVKALEKVRNINSRRPRQLPSDANFEAEK 406
K+ + KKV ++ + ++ + DA A+K
Sbjct: 293 KKDATKDAKKVAKKDTEKESADSKKDAKKNAKKDAKKDAKKNAKK 337
Score = 33.9 bits (76), Expect = 2.8
Identities = 48/245 (19%), Positives = 97/245 (39%), Gaps = 17/245 (6%)
Query: 521 VKSTATKAVKFPVCDTGIMEEEVTAEGEYKVQEKSIVKEDLKHGTSTTDVPYGVQER--D 578
+K T T V + G E+ T + + +S +K+ K D+ G +E+
Sbjct: 99 LKPTRTVEVDSKAAEIGKKGEDKTTQKD-TTDSESELKQGKKDSKKGKDIEKGKEEKLDA 157
Query: 579 QKYIKKWHLMYKQAVLSNTGKYDNKLPVVGKDKEGREQGDAVFNGGNNSSCHNYNE---T 635
+K KK ++ S T D K G K+ ++ N G +S+ + E T
Sbjct: 158 KKDSKKGKKDAEKGKDSATESEDEK----GGAKKDNKKDKKDSNKGKDSATESEGEKGGT 213
Query: 636 DSDMDEEKKNVIELVQKAFDEILLPETEDLSSDDRSKSRSYGSD------ELLEKSEGER 689
+ D + KK+ + A E+ + ++ +D K + G + + E +G++
Sbjct: 214 EKDSKKGKKDSKKGKDSAI-ELQAVKADEKKDEDGKKDANKGDESKDAKKDAKEIKKGKK 272
Query: 690 EEMNATSFTETPKEAKKTENKPKSWSHLKKLIMLKRFVKALDKVRNINPRRPRELPSDAN 749
++ +S K+ K E+K + KK+ ++ D ++ ++ DA
Sbjct: 273 DKKKPSSTDSDSKDDVKKESKKDATKDAKKVAKKDTEKESADSKKDAKKNAKKDAKKDAK 332
Query: 750 FEGEK 754
+K
Sbjct: 333 KNAKK 337
Score = 33.5 bits (75), Expect = 3.6
Identities = 68/363 (18%), Positives = 133/363 (35%), Gaps = 47/363 (12%)
Query: 356 VPKMESKQKSWSHLKKVILLKRFVKALEKVRNINSRRPRQLPSDANFEAEKVLLNRQTSE 415
+P E +KSW+ + F K + ++R R PS ++ Q
Sbjct: 18 IPVSELSKKSWNQ-------QHFALLFPKPQRPGTKR-RSKPSQIRDNTVSIIDEEQLRG 69
Query: 416 ERKKSEEWMLDYALQKVISKLAPAQRQRVTLLVEAFETIRPVQDAENGPQTSATVESHAN 475
+R++ WM S + ++R V L + ++P + E + + + +
Sbjct: 70 DRRQPL-WMYR-------SLMRISERPSVYLAARR-QPLKPTRTVEVDSKAAEIGKKGED 120
Query: 476 LIQSLDASSNHS-----KEEINDRRDFEVTERARNDKNMDACKKNDESATVKSTATKAVK 530
D + + S K++ +D E + + D D+ K ++ K +AT++
Sbjct: 121 KTTQKDTTDSESELKQGKKDSKKGKDIEKGKEEKLDAKKDSKKGKKDAEKGKDSATES-- 178
Query: 531 FPVCDTGIMEEEVTAEGEYKVQEKSIVKEDLKHGTSTTDVP--YGVQERDQKYIKKWHLM 588
E+E +G K K K+ K S T+ G E+D K KK
Sbjct: 179 ---------EDE---KGGAKKDNKKDKKDSNKGKDSATESEGEKGGTEKDSKKGKKDSKK 226
Query: 589 YKQAVLSNTGKYDNKLPVVGKDKEGREQGDAVFNGGNNSSCHNYNETDSDMDE-EKKNVI 647
K + + +L V D++ E G N G+ S + + + +KK
Sbjct: 227 GKDSAI--------ELQAVKADEKKDEDGKKDANKGDESKDAKKDAKEIKKGKKDKKKPS 278
Query: 648 ELVQKAFDEILLPETEDLSSDDRSKSRSYGSDELLEKSEGEREEMNATSFTETPKEAKKT 707
+ D++ +D + D + ++ E + + ++ + + K AKK
Sbjct: 279 STDSDSKDDVKKESKKDATKDAKKVAKKDTEKESADSKKDAKKNAKKDAKKDAKKNAKKD 338
Query: 708 ENK 710
E K
Sbjct: 339 EKK 341
>YNN6_YEAST (P53911) Hypothetical 49.4 kDa protein in NAM9-FPR1
intergenic region
Length = 425
Score = 46.2 bits (108), Expect = 5e-04
Identities = 74/341 (21%), Positives = 134/341 (38%), Gaps = 40/341 (11%)
Query: 454 IRPVQDAENGPQTSATVESHANLIQSLDASSNHSKE--EINDR-----RDFEVTERARND 506
+ + + EN AT ES N + D + H + E+N+R +DF + +
Sbjct: 75 LEKIDEMENTYSLEATTESSRNGNGNGDDAEIHEETLLELNNRIRVRKQDFTLPWEEYGE 134
Query: 507 KNMDACKK----NDESATVKSTATKAVKFPVCDTGIMEEEVTAE--GEYKVQEKSI---V 557
++ +K N+E V+ K D+ I +E + + + QEK+ V
Sbjct: 135 LILENARKSPNSNEEYPRVEDMNEK-------DSTIPKESPSTDLKNDNNKQEKNATIKV 187
Query: 558 KEDLKHGTSTTDVPYGVQER-------DQKYIKKWHLMYKQAVLSNTGKYDNKLPVVGKD 610
KE ++ T D P VQ+ D+K +++ H+ ++ + +T K V K
Sbjct: 188 KELPEYHTEENDSPIDVQKEPIKEVQSDEKELQREHMSEEEQKMKSTNK---TAAPVRKS 244
Query: 611 KEGREQGDAVFNGGNNSSCHNYNETDSDMDEEKKNVIELVQKAFDEILLPETEDLSSDD- 669
+ + + F N D + E+K+ + E +E+ + E+ DD
Sbjct: 245 QRLKRSKEVKFEDEEKEEIEEDNTKDEEQKEKKEEIQEPKITHNEEVDKEKNENEEGDDE 304
Query: 670 RSKSRSYGSDELLEK---SEGEREEMNATSFTETPKEAKKTENKPKSWSHLKKLIMLKRF 726
R KS SY + E EG EE+ S E + K+ E++ +LKK K+
Sbjct: 305 REKSTSYENTNGSESEGVDEGVDEELGYESEREAEGKGKQIESE---GGNLKKKTENKKG 361
Query: 727 VKALDKVRNINPRRPRELPSDANFEGEKVFLNRQTSEERKK 767
D + + + L + +TS +RK+
Sbjct: 362 DDQQDDTKKDSKDKNEPLAKRTRHSSSTGNTSNETSPKRKR 402
Score = 36.6 bits (83), Expect = 0.43
Identities = 40/212 (18%), Positives = 82/212 (37%), Gaps = 36/212 (16%)
Query: 187 PSTVNECDTSTKDKHMVTDYEVLQKSSTQEEPKPGSTTSVAYGVQERDQKYIKKWHLMYK 246
PST + D + ++K+ + L + T+E P + D+K +++ H+ +
Sbjct: 168 PSTDLKNDNNKQEKNATIKVKELPEYHTEENDSPIDVQKEPIKEVQSDEKELQREHMSEE 227
Query: 247 HAVLSNTGKC------------DNKVPLVEKEKEGGEEDNEGNNSYRNYSETDSDMDDEK 294
+ +T K +V ++EKE EEDN + + E ++ + K
Sbjct: 228 EQKMKSTNKTAAPVRKSQRLKRSKEVKFEDEEKEEIEEDNTKDEEQK---EKKEEIQEPK 284
Query: 295 KNVIELVQKAFDEILLPEVEDLSSEGHSKSRGNETDEV---------------------L 333
E V K +E + E S + + G+E++ V
Sbjct: 285 ITHNEEVDKEKNENEEGDDEREKSTSYENTNGSESEGVDEGVDEELGYESEREAEGKGKQ 344
Query: 334 LEKSGGKIEERNTTTFTESPKEVPKMESKQKS 365
+E GG ++++ + ++ K +SK K+
Sbjct: 345 IESEGGNLKKKTENKKGDDQQDDTKKDSKDKN 376
Score = 35.4 bits (80), Expect = 0.95
Identities = 46/270 (17%), Positives = 108/270 (39%), Gaps = 45/270 (16%)
Query: 888 VDEVPEDLVSDLNTKTKDVIGGHGEQFSVTKSLIL--NGIVRSLRSNLVVP--------- 936
+DE+ + T++ G+G+ + + +L N +R + + +P
Sbjct: 78 IDEMENTYSLEATTESSRNGNGNGDDAEIHEETLLELNNRIRVRKQDFTLPWEEYGELIL 137
Query: 937 ----EAPSNRLDEPTTDIKDVVEKDQLEKSEAPTSAVVESKNQLEKQGSTGLWFTVFKHM 992
++P++ + P ++D+ EKD E+P++ + N+ EK +
Sbjct: 138 ENARKSPNSNEEYPR--VEDMNEKDSTIPKESPSTDLKNDNNKQEKNATI---------K 186
Query: 993 VSDMTENNSKTSTDVADEKDSKYEDITTREISVSYENTPVVIQDMPF--KDRAVVDAEVE 1050
V ++ E +++ + D + +++ + E + E+ Q M K A V
Sbjct: 187 VKELPEYHTEENDSPIDVQKEPIKEVQSDEKELQREHMSEEEQKMKSTNKTAAPVRKSQR 246
Query: 1051 LRQIEAIKMVEDAIDSILPDT---------------QPLPDNSTIDRTGGIYSEGLNQKE 1095
L++ + +K ++ + I D + N +D+ EG +++E
Sbjct: 247 LKRSKEVKFEDEEKEEIEEDNTKDEEQKEKKEEIQEPKITHNEEVDKEKNENEEGDDERE 306
Query: 1096 Q--KMESGNGIVEERKEESVSKEVNKPNQK 1123
+ E+ NG E +E V +E+ +++
Sbjct: 307 KSTSYENTNGSESEGVDEGVDEELGYESER 336
>MYHB_CHICK (P10587) Myosin heavy chain, gizzard smooth muscle
Length = 1978
Score = 45.4 bits (106), Expect = 0.001
Identities = 158/825 (19%), Positives = 312/825 (37%), Gaps = 132/825 (16%)
Query: 120 LKRFVSMRRRQLKSQKSTKKDGRSKQVGNARKGTQKTKTVHS---EDGNSQQNVKNVS-- 174
LK ++ + +L++ + +D S Q NA K ++ ++ S ED S++ +N +
Sbjct: 1086 LKAQLAKKEEELQAALARLEDETS-QKNNALKKIRELESHISDLQEDLESEKAARNKAEK 1144
Query: 175 --------MESSPFKPHDAPPSTVNECDTSTKDKHMVTDYEVLQKSSTQEEPKPGSTTSV 226
+E+ + D +T + + K + VT VL+++ +E T +
Sbjct: 1145 QKRDLSEELEALKTELEDTLDTTATQQELRAKREQEVT---VLKRALEEE------TRTH 1195
Query: 227 AYGVQERDQKYIKKWHLMYKHAVLSNTGKCDNKVPLVEKEKEGGEEDNEG-NNSYRNYSE 285
VQE QK+ + + + K + ++K K+ E+DN N R+ S+
Sbjct: 1196 EAQVQEMRQKHTQAVEELTEQLEQFKRAKAN-----LDKTKQTLEKDNADLANEIRSLSQ 1250
Query: 286 TDSDMDDEKKNV------------------IELVQKAFD-EILLPEVEDLSSEGHSK--- 323
D++ +KK + EL +K +I + V L +E SK
Sbjct: 1251 AKQDVEHKKKKLEVQLQDLQSKYSDGERVRTELNEKVHKLQIEVENVTSLLNEAESKNIK 1310
Query: 324 ---------SRGNETDEVLLEKSGGKIEERNTTTFTESPKEVPKMESKQKSWSHLKKVIL 374
S+ +T E+L E++ K+ N TT ++ ++E + S
Sbjct: 1311 LTKDVATLGSQLQDTQELLQEETRQKL---NVTT------KLRQLEDDKNSLQEQ----- 1356
Query: 375 LKRFVKALEKVRNINSRRPRQLPSDANFEAEKVLLNRQTSEERKKSEEWMLDYALQKVIS 434
L V+A + + S QL SD+ + ++ +T EE KK + ++ Q+
Sbjct: 1357 LDEEVEAKQNLERHISTLTIQL-SDSKKKLQEFTATVETMEEGKKKLQREIESLTQQFEE 1415
Query: 435 KLAPAQRQRVTLLVEAFETIRPVQDAENGPQTSATVESHANLIQSLDASSNHSKEEINDR 494
K A + T E V D +N Q + +E + A + + D
Sbjct: 1416 KAASYDKLEKTKNRLQQELDDLVVDLDNQRQLVSNLEKKQKKFDQMLAEEKNISSKYADE 1475
Query: 495 RD-FEVTERARNDKNMDACKKNDESATVKSTATKAVKFPVCDTGIMEEEVTAEGEYKVQE 553
RD E R + K + + +E+ K + K + ME+ V+++ +
Sbjct: 1476 RDRAEAEAREKETKALSLARALEEALEAKEELERTNKMLKAE---MEDLVSSKDDVGKNV 1532
Query: 554 KSIVKEDLKHGTSTTDVPYGVQERDQKYIKKWHLMYKQAVLSNTGKYDNKLPVVGKDKEG 613
+ K ++ ++E + + + V K + + +D++
Sbjct: 1533 HELEKSKRTLEQQVEEMKTQLEELEDELQAAEDAKLRLEVNMQAMKSQFERDLQARDEQN 1592
Query: 614 REQGDAVFNGGNNSSCHNYNETDSDMDEEKKNVIELVQKAFDEILLPETEDLSS--DDRS 671
E+ + +E ++++++E+K + A + L + +DL S D +
Sbjct: 1593 EEKRRQLLK--------QLHEHETELEDERKQ--RALAAAAKKKLEVDVKDLESQVDSAN 1642
Query: 672 KSRSYGSDEL-------------LEKSEGEREEMNATSFTETPKEAKKTE---------- 708
K+R +L L+ + REE+ AT+ E K+AK E
Sbjct: 1643 KAREEAIKQLRKLQAQMKDYQRDLDDARAAREEIFATA-RENEKKAKNLEAELIQLQEDL 1701
Query: 709 ---NKPKSWSHLKKLIMLKRFVKALDKVRNINPRRPRELPSDANFEGE--KVFLNRQTSE 763
+ + + L+K M + A ++ + R A E E + N +T
Sbjct: 1702 AAAERARKQADLEKEEMAEELASANSGRTSLQDEKRRLEARIAQLEEELDEEHSNIETMS 1761
Query: 764 ERKKSEEWMLDYALQKVISKLAPAQRQ---RVTLLIEAFETLRPIQDAENGLRSS----- 815
+R + + ++ ++ A AQ+ R L + E +Q+ E ++S
Sbjct: 1762 DRMRKAVQQAEQLNNELATERATAQKNENARQQLERQNKELRSKLQEMEGAVKSKFKSTI 1821
Query: 816 ----ATVESLENPLQSLDASSVLSAKTLLGKVSFSNDSTMEFSDK 856
A + SLE L+ +AKTL K D+ ++ D+
Sbjct: 1822 AALEAKIASLEEQLEQEAREKQAAAKTLRQKDKKLKDALLQVEDE 1866
>CALD_CHICK (P12957) Caldesmon (CDM)
Length = 771
Score = 45.4 bits (106), Expect = 0.001
Identities = 84/384 (21%), Positives = 148/384 (37%), Gaps = 42/384 (10%)
Query: 624 GNNSSCHNYNETDSDMDEEKKNVIELVQKAFDEILLPETEDLSSD---------DRSKSR 674
G + E ++ E+ V V+K+ D+ + ET+ L+ + + +S
Sbjct: 178 GKKEEKDSEEEKPKEVPTEENQVDVAVEKSTDKEEVVETKTLAVNAENDTNAMLEGEQSI 237
Query: 675 SYGSDELLEKSEGEREEMNATSFT--ETPKEAKKTENKPKSWSHLK--------KLIMLK 724
+ +D+ E++E ERE++ A + +E K E K K+ K K K
Sbjct: 238 TDAADKEKEEAEKEREKLEAEEKERLKAEEEKKAAEEKQKAEEEKKAAEERERAKAEEEK 297
Query: 725 RFVKALDKVRNINPRRPRELPSDANFEGEKVFLNRQTS--EERKKSEEWMLDYALQKVIS 782
R + ++ + R+ E A E E+ + EERK +EE +K
Sbjct: 298 RAAEERERAKAEEERKAAEERERAKAEEERKAAEERAKAEEERKAAEERAKAEEERKAAE 357
Query: 783 KLAPAQRQRVTLLIEAFETLRPIQD---AENGLRSSATVESLENPLQSLDASSVLSAKTL 839
+ A A+++R E E + ++ AE R A + ++ A + L
Sbjct: 358 ERAKAEKERKAA--EERERAKAEEEKRAAEEKARLEAEKLKEKKKMEEKKAQEEKAQANL 415
Query: 840 LGKVSFSNDSTMEFSDKASDNPMPELCKPIKPVETI--SSCHEEAPTKRMVDEVPEDLVS 897
L K ++ +E A +PE +P + + + E+AP + M V
Sbjct: 416 LRKQEEDKEAKVE----AKKESLPEKLQPTSKKDQVKDNKDKEKAPKEEMKS------VW 465
Query: 898 DLNTKTKDVIGGHGEQFSVTKSL--ILNGIVRSLRSNLVVPEAPSNRLDEPTTDIKDVVE 955
D + +GE+ T L N RS EA S +L E + VE
Sbjct: 466 DRKRGVPEQKAQNGERELTTPKLKSTENAFGRSNLKGAANAEAGSEKLKEKQQEA--AVE 523
Query: 956 KDQLEKSEAPTSAVVESKNQLEKQ 979
D+L+K ++E + Q +KQ
Sbjct: 524 LDELKKRREERRKILEEEEQKKKQ 547
Score = 40.0 bits (92), Expect = 0.039
Identities = 65/355 (18%), Positives = 139/355 (38%), Gaps = 34/355 (9%)
Query: 128 RRQLKSQKSTKKDGRSKQVGNARKGT---QKTKTVHS--------EDGNSQQNVKNVSME 176
RR++ + + + G+ ++V R+G ++T+TV +DG ++ K +
Sbjct: 128 RREVNNVEENEITGKEEKV-ETRQGRCEIEETETVTKSYQRNNWRQDG--EEEGKKEEKD 184
Query: 177 SSPFKPHDAPPSTVNECDTSTKDKHMVTDYEVLQKSSTQEEPKPGSTTSVAYGVQERDQK 236
S KP + P N+ D + + TD E + ++ T T ++ G Q
Sbjct: 185 SEEEKPKEVPTEE-NQVDVAVEKS---TDKEEVVETKTLAVNAENDTNAMLEGEQSITDA 240
Query: 237 YIKKWHLMYKHAVLSNTGKCDNKVPLVEKEKEGGEEDNEGNNSYRNYSETDSDMDDEKKN 296
K+ K K+ EKE+ EE+ + + E ++ ++
Sbjct: 241 ADKEKEEAEKER---------EKLEAEEKERLKAEEEKKAAEEKQKAEEEKKAAEERERA 291
Query: 297 VIELVQKAFDEILLPEVEDLSSEGHSKSRGNETDEVLLEKSGGKIEERNTTTFTESPKEV 356
E ++A +E + E+ + R +E + K EE ++ +E
Sbjct: 292 KAEEEKRAAEERERAKAEEERKAAEERERAKAEEERKAAEERAKAEEER-----KAAEER 346
Query: 357 PKMESKQKSWSHLKKVILLKRFVKALEKVRNINSRRPRQLPSDANFEAEKVLLNRQTSEE 416
K E ++K+ K ++ + E+ + +R + A EAEK+ ++ E+
Sbjct: 347 AKAEEERKAAEERAKAEKERKAAEERERAKAEEEKRAAE--EKARLEAEKLKEKKKMEEK 404
Query: 417 RKKSEEWMLDYALQKVISKLAPAQRQRVTLLVEAFETIRPVQDAENGPQTSATVE 471
+ + E+ + ++ K A + ++ +L + T + Q +N + A E
Sbjct: 405 KAQEEKAQANLLRKQEEDKEAKVEAKKESLPEKLQPTSKKDQVKDNKDKEKAPKE 459
>YM96_YEAST (Q04893) Hypothetical 113.1 kDa protein in PRE5-FET4
intergenic region
Length = 1140
Score = 44.7 bits (104), Expect = 0.002
Identities = 72/335 (21%), Positives = 118/335 (34%), Gaps = 34/335 (10%)
Query: 815 SATVESLENPLQSLDASSVLSAKTLLGKVSFSNDSTMEFSDKASDNPMPELCKPIK---P 871
S+T S+ + + S +SSV S L S+++ S S + P
Sbjct: 314 SSTSSSVSSEISSTTSSSVSSEAPLATSSVVSSEAPSSTSSSVSSEISSTTSSSVSSEAP 373
Query: 872 VETISSCHEEAPTKR---MVDEVPEDLVSDLNTKTKDVIGGH-GEQFSVTKSLILNGIVR 927
+ T S EAP+ + E P S ++++ + S TKS +++ V
Sbjct: 374 LATSSVVSSEAPSSTSSSVSSEAPSSTSSSVSSEAPSSTSSSVSSEISSTKSSVMSSEVS 433
Query: 928 SLRSNLVVPEAP-------SNRL----DEPTTDIKDVVEKDQLEKSEAPTSAVVESKNQL 976
S S+LV EAP S+RL + T E + S P+S + S + +
Sbjct: 434 SATSSLVSSEAPSAISSLASSRLFSSKNTSVTSTLVATEASSVTSSLRPSSETLASNSII 493
Query: 977 EKQGSTGLWFTVFKHMVSDMTENNSKTSTDVADEKDSKYEDITTREISVSYENTPVVIQD 1036
E STG + VS T S T +S+ T S + V+ +
Sbjct: 494 ESSLSTG-----YNSTVSTTTSAASSTLGSKVSSSNSRMATSKTSSTSSDLSKSSVIFGN 548
Query: 1037 MPFKDRAVVDAEVELRQIEAIKMVEDAIDSILPDTQPLPDNSTIDRTGGIYSEGLNQKEQ 1096
+ V +I + + S+ D +S S +
Sbjct: 549 ---------SSTVTTSPSASISLTASPLPSVWSDITSSEASSISSNLAS--SSAPSDNNS 597
Query: 1097 KMESGNGIVEERKEESVSKEVNKPNQKLSRNWSNL 1131
+ S + IV + K VS V+ + N SNL
Sbjct: 598 TIASASLIVTKTKNSVVSSIVSSITSSETTNESNL 632
>NFM_RAT (P12839) Neurofilament triplet M protein (160 kDa
neurofilament protein) (Neurofilament medium
polypeptide) (NF-M)
Length = 845
Score = 44.7 bits (104), Expect = 0.002
Identities = 71/321 (22%), Positives = 128/321 (39%), Gaps = 52/321 (16%)
Query: 266 EKEGGEEDNEGNNSYRNYSET-----DSDMDDEKKN-------------VIELVQKAFDE 307
EKEG E +EG +E +++ +EKK +E +KA
Sbjct: 545 EKEGSSEKDEGEQEEEGETEAEGEGEEAEAKEEKKTEGKVEEMAIKEEIKVEKPEKAKSP 604
Query: 308 ILLPEVEDLSSEGHSKSRGNETDEVLLEKSGGKIEERNTTTFTESPKE--VPKMESKQKS 365
+ VE++ + +K+ +E +K K+EE+ ESPKE V K E K K
Sbjct: 605 VPKSPVEEVKPKPEAKAGKDE------QKEEEKVEEKKEVA-KESPKEEKVEKKEEKPKD 657
Query: 366 WSHLKKVILLKRFVKALEKVRNINSRRPRQLPSDANFEAEKVLLNRQTSEERKKSEEWML 425
KK + KA+E++ I ++ KV L + T EE+ + +E +
Sbjct: 658 VPDKKKAESPVK-EKAVEEMITIT-------------KSVKVSLEKDTKEEKPQQQEKVK 703
Query: 426 DYA-----LQKVISKLAPAQRQRVTLLVEAFETIRPVQDAENGPQTSATVESHANLIQSL 480
+ A ++ + +P + ++ + + + ++ E + S E + L
Sbjct: 704 EKAEEEGGSEEEVGDKSPQESKKEDIAINGEVEGKEEEEQETQEKGSGQEEEKGVVTNGL 763
Query: 481 DASSNHSKEEINDRRDFEVTERARNDKNMDACKKNDESAT--VKSTATKAVKFPVCDTGI 538
D S K+ DR D +V + +K + + AT + + T K +
Sbjct: 764 DVSPAEEKKG-EDRSDDKVVVTKKVEK---ITSEGGDGATKYITKSVTVTQKVEEHEETF 819
Query: 539 MEEEVTAEGEYKVQEKSIVKE 559
E+ V+ + KV +IVKE
Sbjct: 820 EEKLVSTKKVEKVTSHAIVKE 840
Score = 39.7 bits (91), Expect = 0.051
Identities = 68/320 (21%), Positives = 124/320 (38%), Gaps = 25/320 (7%)
Query: 264 EKEKEGGEEDNEGNNSYRNYSETDSDMDDEKKNVIELVQKAFDEILLPEVEDLSSEGHSK 323
++E E EE+ E S E + + EK+ E ++ E ED +
Sbjct: 487 KEEAEEKEEEPEVEKSPVKSPEAKEEEEGEKEEEEEGQEE-------EEEEDEGVKSDQA 539
Query: 324 SRGNETDEVLLEKSGGKIEERNTTTFTESPKEVPKMESKQKSWSHLK-KVILLKRFVKAL 382
G E EK G+ EE TE+ E + E+K++ + K + + +K +K +
Sbjct: 540 EEGGSEKEGSSEKDEGEQEEEGE---TEAEGEGEEAEAKEEKKTEGKVEEMAIKEEIK-V 595
Query: 383 EKVRNINSRRPRQLPSDANFEAEKVLLNRQTSEERKKSEEWMLDYALQKVISKLAPAQRQ 442
EK S P+ + + E + EE K E +K ++K +P + +
Sbjct: 596 EKPEKAKSPVPKSPVEEVKPKPEAKAGKDEQKEEEKVEE--------KKEVAKESP-KEE 646
Query: 443 RVTLLVEAFETIRPVQDAENGPQTSATVESHANLIQSLDASSNHSKEEINDRRDFEVTER 502
+V E + + + AE+ P VE + +S+ S +E ++ +V E+
Sbjct: 647 KVEKKEEKPKDVPDKKKAES-PVKEKAVEEMITITKSVKVSLEKDTKEEKPQQQEKVKEK 705
Query: 503 ARNDKNMDACKKNDESATVKSTATKAVKFPVCDTGIMEEEVTAEGEYKVQEKSIVKEDLK 562
A + + + D+S A+ V E+E +G + +EK +V L
Sbjct: 706 AEEEGGSEE-EVGDKSPQESKKEDIAINGEVEGKEEEEQETQEKGSGQEEEKGVVTNGL- 763
Query: 563 HGTSTTDVPYGVQERDQKYI 582
S + G D K +
Sbjct: 764 -DVSPAEEKKGEDRSDDKVV 782
Score = 35.8 bits (81), Expect = 0.73
Identities = 36/122 (29%), Positives = 54/122 (43%), Gaps = 16/122 (13%)
Query: 661 ETEDLSSDDRSK--SRSYGSDELLEKSEGEREEMNATSF-----TETPKEAKKTENKPKS 713
E E + SD + S GS E K EGE+EE T KE KKTE K +
Sbjct: 530 EDEGVKSDQAEEGGSEKEGSSE---KDEGEQEEEGETEAEGEGEEAEAKEEKKTEGKVEE 586
Query: 714 WSHLKKLIMLKRFVKA-----LDKVRNINPRRPRELPSDANFEGEKVFLNRQTSEERKKS 768
+ +K+ I +++ KA V + P+ + D E EKV ++ ++E K
Sbjct: 587 MA-IKEEIKVEKPEKAKSPVPKSPVEEVKPKPEAKAGKDEQKEEEKVEEKKEVAKESPKE 645
Query: 769 EE 770
E+
Sbjct: 646 EK 647
>TRHY_SHEEP (P22793) Trichohyalin
Length = 1549
Score = 43.9 bits (102), Expect = 0.003
Identities = 92/553 (16%), Positives = 210/553 (37%), Gaps = 81/553 (14%)
Query: 231 QERDQKYIKKWHLMYKHAVLSNTGKCDNKVPLVEKEKEGGEEDNEGNNSYRNYSETDSDM 290
QER+++Y++K L + + ++ E+EK E + + E
Sbjct: 474 QEREKQYLEKVEL-----------REEEQLQRQEREKRRQERERQYLEKVELQEEEQLQR 522
Query: 291 DDEKKNVIELVQKAFDEILLPEVEDLSSEGHSKSRGNETDEVLLEKSGGKIEERNTTTFT 350
++ +K E ++ +++ L E E L + K R E ++ LEK + EE
Sbjct: 523 EEREKRRQERERQYLEKVELQEEEQLQRQEREKRR-QEREKQYLEKVELQEEE------- 574
Query: 351 ESPKEVPKMESKQKSWSHLKKVILLKRFVKALEKVRNINSRRPRQLPSDANFEAEKVLLN 410
+ ++ + +++ +L+KV L + ++ R RQ + E+ +
Sbjct: 575 QLQRQERQKRRQEREKQYLEKVELQEEEQLQRQEREKRRQERERQYLEKVELQEEEQVQR 634
Query: 411 RQTSEERKKSEEWMLDYALQKVISKLAPAQRQRVTLLVEAFETIRPVQDAENGPQTSATV 470
++ + R++ E L+ LQ+ +L ++ LL E E R ++ + +
Sbjct: 635 QEREKRRQERERQYLEKELQRQEERLQEEEQ----LLREEREKRRQERERQYLEKVELQE 690
Query: 471 ESHANLIQSLDASSNHSKEEINDRRDFEVTERARNDKNMDACKKNDESATVKSTATKAVK 530
E + L + + +R+ E E R ++ + K+ + + +
Sbjct: 691 E------EQLQREEREKRRQERERQYLEKEELQRQEERLQREKEQLQRED------REKR 738
Query: 531 FPVCDTGIMEEEVTAEGEYKVQEKSIVKEDLKHGTSTTDVPYGVQERDQKYIKKWHLMYK 590
V + +EEE+ E + +EK +++ED ++Y++K L +
Sbjct: 739 RQVRERKYLEEELQQEEDRLQREKQLLRED---------------REKRQYLEKVELQRE 783
Query: 591 QAVLSNTGKYDNKLPVVGKDKEGREQGDAVFNGGNNSSCHNYNETDSDMDEEKKNVIELV 650
+ L + + +++ RE+ H + + EK+ EL
Sbjct: 784 EEQLQREKRRQERERQYREEELLREE----------ERLHRKEQQLQREECEKRRRQELE 833
Query: 651 QKAFDEILLPETEDLSSDDRSKSRSYGSDELLEKSEGEREEMNATSFTETPKEAKKTENK 710
++ E E+L DR + + + + + E N+ +++ + +K+
Sbjct: 834 RQL-------EEEELQRLDRKR-------QFRDDDQHQNEVRNSRVYSKHRENKEKSRQL 879
Query: 711 PKSWSHLKKLIMLKRFVKALDKVRNINPRRPRELPS----DANFEGEKVFLNRQTSEERK 766
SW + ++ ++ L + R +E S D+ F E++ Q E +
Sbjct: 880 DDSWVRESQ---FQQDLRPLQDEQEEKREREQEWRSRQKRDSQFPAEQLLEREQQKETER 936
Query: 767 KSEEWMLDYALQK 779
+ ++ + L K
Sbjct: 937 RDRKFREEEQLLK 949
Score = 36.2 bits (82), Expect = 0.56
Identities = 84/486 (17%), Positives = 178/486 (36%), Gaps = 46/486 (9%)
Query: 231 QERDQKYIKKWHLMYKHAVLSNTGKCDNKVPLVEKEKEGGEEDNEGNNSYRNYSETDSDM 290
QERD+K+ ++ L+ + + D K E+ + EE R + E +
Sbjct: 996 QERDRKFREEEQLLQEREEQLRRQERDRKFREEEQLLQEREEQLRRQERDRKFREEE--- 1052
Query: 291 DDEKKNVIELVQKAFDEILLPEVEDLSSEGHSKSRGNETDEVLLEKSGGKIEERNTTTFT 350
+L+Q+ +++ E + E + R E ++ L ++ K E
Sbjct: 1053 --------QLLQEREEQLRRQERDRKFREEEQQLRLLEREQQLRQERNRKFREEQLLRER 1104
Query: 351 ESPKEV----PKMESKQKSWSHLKKVILLKRFVKALEKVRNINSRRPRQLPSDANFEAEK 406
E + P++ K+ H ++ +L +R + + R+ R Q+ + +
Sbjct: 1105 EEQLRLQEGEPQLRQKRDRKFHEEEQLLQEREEQLRRQERDRKFREEAQILKEREEQ--- 1161
Query: 407 VLLNRQTSEERKKSEEWMLDYALQKVISKLAPAQRQR--------VTLLVEAFETIRPVQ 458
L RQ + + + EE +L + + P RQ LL E + R +
Sbjct: 1162 --LRRQERDRKFREEEQLLQEREELRRQEREPQLRQERDRKFREEEQLLQEREKLRRQER 1219
Query: 459 DAENGPQTSATVESHANLIQSLDASSNHSKEEINDRRDFEVT-ERARNDKNMDACKKNDE 517
+ + + L+Q + + + R + ++ ER + + +K E
Sbjct: 1220 EPQLRQERDRKFHEEEQLLQEREEQLRRQERDRKFREEAQLLQEREEQLRRQERDRKFRE 1279
Query: 518 SATVKSTATKAVKFPVCDTGIMEEEVTA---EGEYKVQEKSIVKEDLKHGTSTTDVPYGV 574
+ + ++ D EEE E + + QE+ + + ++
Sbjct: 1280 EEQLLQEREEQLRRQERDRKFREEEQLLQEREEQLRRQERDRKFREEEQLLKESEEQLRR 1339
Query: 575 QERDQKYIKKWHLM-------YKQAVLSNTGKYDNKLPVVGKDKEGREQGDAVFNGGNNS 627
QERD+K+ +K HL+ ++ L + +L +++E R Q +
Sbjct: 1340 QERDRKFHEKEHLLREREEQQLRRQELEGVFSQEEQLRRAEQEEEQRRQRQR-----DRK 1394
Query: 628 SCHNYNETDSDMDEEKKNVIELVQKAF--DEILLPETEDLSSDDRSKSRSYGSDELLEKS 685
+ +EEK+ V E +K +E L E ++ + + Y ++E +
Sbjct: 1395 FLEEEQSLQREREEEKRRVQEQDRKFLEQEEQLHREEQEELRRRQQLDQQYRAEEQFARE 1454
Query: 686 EGEREE 691
E R +
Sbjct: 1455 EKRRRQ 1460
Score = 33.1 bits (74), Expect = 4.7
Identities = 56/260 (21%), Positives = 104/260 (39%), Gaps = 33/260 (12%)
Query: 575 QERDQKYIKKWHLMYKQAVLSNTGKYDNKLPVVGKDKEGREQGDAVFNGGNNSSCHNYNE 634
QER+++Y++K L ++ V ++K +E+ E
Sbjct: 614 QERERQYLEKVELQEEEQVQRQE-----------REKRRQERERQYLEKELQRQEERLQE 662
Query: 635 TDSDMDEEK-KNVIELVQKAFDEILLPETEDLSSDDRSKSRSYGSDELLEKSEGEREEMN 693
+ + EE+ K E ++ +++ L E E L ++R K R + LEK E +R+E
Sbjct: 663 EEQLLREEREKRRQERERQYLEKVELQEEEQLQREEREKRRQERERQYLEKEELQRQEER 722
Query: 694 ATSFTETPKEAKKTENKPKSWSHLKKLIMLKRFVKALDKVRNINPRRPRELPSDANFEG- 752
+ KE + E++ K ++ + + + D+++ R + L D
Sbjct: 723 ----LQREKEQLQREDREKRRQVRERKYLEEELQQEEDRLQ----REKQLLREDREKRQY 774
Query: 753 -EKVFLNRQTS--EERKKSEEWMLDYALQKVISKLAPAQRQRVTLLIEAFETLRPIQDAE 809
EKV L R+ + K+ +E Y ++++ + R+ L E E R Q+ E
Sbjct: 775 LEKVELQREEEQLQREKRRQERERQYREEELLREEERLHRKEQQLQREECEKRRR-QELE 833
Query: 810 NGLRSSATVESLENPLQSLD 829
L E LQ LD
Sbjct: 834 RQLE--------EEELQRLD 845
>NFM_MOUSE (P08553) Neurofilament triplet M protein (160 kDa
neurofilament protein) (Neurofilament medium
polypeptide) (NF-M)
Length = 848
Score = 43.9 bits (102), Expect = 0.003
Identities = 79/388 (20%), Positives = 150/388 (38%), Gaps = 55/388 (14%)
Query: 194 DTSTKDKHMVTDYEVLQKSSTQEEPKPGSTTSVAYGVQERDQKYIKKWHLMYKHAVLSNT 253
+ K++ + ++ +EE + G G +E +++ V S+
Sbjct: 489 EAEEKEEEPEAEKSPVKSPEAKEEEEEGEKEEEEEGQEEEEEE---------DEGVKSDQ 539
Query: 254 GKCDNKVPLVEKEKEGGEEDNEGNNSYRNYSETDSDMDDEKK---NVIELVQKAFDEILL 310
+ EK+ GE++ E + +++ +EKK V E+ K ++
Sbjct: 540 AEEGGSEKEGSSEKDEGEQEEEEGETEAEGEGEEAEAKEEKKIEGKVEEVAVKEEIKVEK 599
Query: 311 PE----------VEDLSSEGHSKSRGNETDEVLLEKSGGKIEERNTTTFTESPKE--VPK 358
PE VE++ + +K+ E +K K+EE ESPKE V K
Sbjct: 600 PEKAKSPMPKSPVEEVKPKPEAKAGKGE------QKEEEKVEEEKKEVTKESPKEEKVEK 653
Query: 359 MESKQKSWSHLKKVILLKRFVKALEKVRNINSRRPRQLPSDANFEAEKVLLNRQTSEERK 418
E K K + KK + KA+E+V I+ ++ KV L + T EE+
Sbjct: 654 KEEKPKDVADKKKAESPVK-EKAVEEVITIS-------------KSVKVSLEKDTKEEKP 699
Query: 419 KSEEWMLDYA-----LQKVISKLAPAQRQRVTLLVEAFETIRPVQDAENGPQTSATVESH 473
+ +E + + A ++ S +P + ++ + + + ++ E + S E
Sbjct: 700 QPQEKVKEKAEEEGGSEEEGSDRSPQESKKEDIAINGEVEGKEEEEQETQEKGSGREEEK 759
Query: 474 ANLIQSLDASSNHSKEEINDRRDFEVTERARNDKNMDACKKNDESAT--VKSTATKAVKF 531
+ LD S K+ D D +V + +K + + AT + + T K
Sbjct: 760 GVVTNGLDVSPAEEKKG-EDSSDDKVVVTKKVEK---ITSEGGDGATKYITKSVTVTQKV 815
Query: 532 PVCDTGIMEEEVTAEGEYKVQEKSIVKE 559
+ E+ V+ + KV +IVKE
Sbjct: 816 EEHEETFEEKLVSTKKVEKVTSHAIVKE 843
>GAR2_SCHPO (P41891) Protein gar2
Length = 500
Score = 43.5 bits (101), Expect = 0.003
Identities = 43/235 (18%), Positives = 94/235 (39%), Gaps = 26/235 (11%)
Query: 128 RRQLKSQKSTKKDGRSKQVGNARKGTQKTKTVHSEDGNSQQNVKNVSMESSPFKPHDAPP 187
+ + +KS K+ R+ ++K +K K ++ +S ++ S S ++
Sbjct: 46 KTDVSPKKSKKEAKRASSPEPSKKSVKKQKKSKKKEESSSESESESSSSESESSSSESES 105
Query: 188 STVNECDTSTKDKHMVTDYEVLQKSSTQEEPKPGSTTSVAYGVQERDQKYIKKWHLMYKH 247
S+ +S++ ++ EV+ K+ EE K S+ S + E +++ + K
Sbjct: 106 SSSESESSSSESSSSESEEEVIVKT---EEKKESSSESSSSSESEEEEEAVVK------- 155
Query: 248 AVLSNTGKCDNKVPLVEKEKEGGEEDNEGNNSYRNYSETDSDMDDEKKNVIELVQKAFDE 307
+E++KE + + ++S + SE+ S +E++ V+E ++ E
Sbjct: 156 ---------------IEEKKESSSDSSSESSSSESESESSSSESEEEEEVVEKTEEK-KE 199
Query: 308 ILLPEVEDLSSEGHSKSRGNETDEVLLEKSGGKIEERNTTTFTESPKEVPKMESK 362
D S S S ++D +S E+ + +E P +K
Sbjct: 200 GSSESSSDSESSSDSSSESGDSDSSSDSESESSSEDEKKRKAEPASEERPAKITK 254
Score = 34.3 bits (77), Expect = 2.1
Identities = 42/196 (21%), Positives = 82/196 (41%), Gaps = 23/196 (11%)
Query: 522 KSTATKAVKFPVCDTGIMEEEVTAEGEYKVQEKSIVKEDLKHGTSTTDVPYGVQERDQKY 581
K++ K+VK G +E+ ++ K K I K+ +S TDV +++ K
Sbjct: 6 KTSVKKSVKETASKKGAIEKPSKSKKITKEAAKEIAKQ-----SSKTDVSPKKSKKEAK- 59
Query: 582 IKKWHLMYKQAVLSNTGKYDNKLPVVGKDKEGREQGDAVFNGGNNSSCHNYNETDSDMDE 641
+A K K K KE ++ ++ S + +E++S E
Sbjct: 60 ---------RASSPEPSKKSVKKQKKSKKKE-ESSSESESESSSSESESSSSESESSSSE 109
Query: 642 EKKNVIELVQKAFDEILLPETE---DLSSDDRSKSRSYGSDELL----EKSEGEREEMNA 694
+ + E +E ++ +TE + SS+ S S S +E + EK E + +
Sbjct: 110 SESSSSESSSSESEEEVIVKTEEKKESSSESSSSSESEEEEEAVVKIEEKKESSSDSSSE 169
Query: 695 TSFTETPKEAKKTENK 710
+S +E+ E+ +E++
Sbjct: 170 SSSSESESESSSSESE 185
>MAPB_RAT (P15205) Microtubule-associated protein 1B (MAP 1B)
(Neuraxin) [Contains: MAP1 light chain LC1]
Length = 2459
Score = 43.1 bits (100), Expect = 0.005
Identities = 108/532 (20%), Positives = 196/532 (36%), Gaps = 87/532 (16%)
Query: 209 LQKSSTQEEPKPGSTTSVAYG--VQERDQKYIKKWHLMYKHAVLSNTGKCDNKVPLVEKE 266
++K S +E P+ + V V+ +++ +KK GK ++K + EKE
Sbjct: 556 VRKESKEEAPEATKASQVEKTPKVESKEKVIVKK----------DKPGKVESKPSVTEKE 605
Query: 267 KEGGEEDNEGNNSYRNYSETDSDMDDEKKNVIEL-----------------VQKAFDEIL 309
EE + + T+S K V++ V K D+
Sbjct: 606 VPSKEEQSPVKAEVAEKAATESKPKVTKDKVVKKEIKTKPEEKKEEKPKKEVAKKEDKTP 665
Query: 310 LPEVEDLSSEGHSKSRGNETDEVLLEKSGGKIEERNTTTFTESPKEVPKMESKQKSWSHL 369
L + E E K E + EK K E + T ++ KEV K E K+
Sbjct: 666 LKKDEKPKKEEAKKEIKKEIKKE--EKKELKKEVKKETPLKDAKKEVKKDEKKEVKKEEK 723
Query: 370 KKVILLKRFVKALEKVRNI-NSRRPRQLPSDANFEAEKVLLNRQTSEERKKSEEWMLDYA 428
+ +K+ K ++K + ++++P L KV + +++ + + D
Sbjct: 724 EPKKEIKKISKDIKKSTPLSDTKKPAAL-------KPKVAKKEEPTKKEPIAAGKLKDKG 776
Query: 429 LQKVISKLAPAQRQRVTLLVEAFETIRPVQDAENGPQTSATVESHANLIQSLDASSNH-- 486
KVI K T + A A +GP + +E+ +L+ S + +
Sbjct: 777 KVKVIKKEGKTTEAAATAVGTA-AVAAAAGVAASGP--AKELEAERSLMSSPEDLTKDFE 833
Query: 487 --SKEEINDRRDFE-VTERARNDKNMDACKKNDESATVKSTATKAVKFPVCDTGIMEEEV 543
EEI+ +D + E +++ + + + K T D GI E
Sbjct: 834 ELKAEEIDVAKDIKPQLELIEDEEKLKETEPGEAYVIQKETEVSKGSAESPDEGITTTEG 893
Query: 544 TAEGEYKVQE-KSIVKEDLKHGTSTTDVPYGVQERDQKYIKKWHLMYKQAVLSNTGKYDN 602
E E +E + + K+ + D G +E S G Y+
Sbjct: 894 EGECEQTPEELEPVEKQGVDDIEKFEDEGAGFEES-----------------SEAGDYEE 936
Query: 603 KLPVVGKDKEGRE-QGDAVFNGGNNSSCHNYNETDSDMDEEKKNVIELVQKAFDEILLPE 661
K + +E E + D N ++S H+ E DEE + KA ++ + E
Sbjct: 937 K----AETEEAEEPEEDGEDNVSGSASKHSPTE-----DEE-------IAKAEADVHIKE 980
Query: 662 TED--LSSDDRSKSRSYGSDELLEKSEGEREEMNATSFTETPKEAKKTENKP 711
+ S DDR++ DE LEK E E+ E + ++A++ +++P
Sbjct: 981 KRESVASGDDRAEE---DMDEALEKGEAEQSEEEGEEEEDKAEDAREEDHEP 1029
>TRDN_CANFA (P82179) Triadin
Length = 700
Score = 42.7 bits (99), Expect = 0.006
Identities = 109/540 (20%), Positives = 196/540 (36%), Gaps = 83/540 (15%)
Query: 268 EGGEEDNEGNNSYRNYSETDS-DMDDEKKNVIELVQKAFDEILLPEVEDLSSEGH-SKSR 325
+G E+D++G+ +TD ++++ E+ ++ ++ PE + L+ H K +
Sbjct: 116 DGDEDDDDGDE------DTDKGEIEEPPLKQKEIHKEKAEKEEKPERKILAKVAHREKEK 169
Query: 326 GNETDEVLLEKSGGKIEERNTTTFTESP--KEVPKMESKQKSWSHLKKVIL---LKRFVK 380
E EKS K + E P K + K E K K+ +KK + ++
Sbjct: 170 VKEK-----EKSEKKATHKEKIEKKEKPETKTMAKEERKAKTEEKIKKEVKGGKQEKVKP 224
Query: 381 ALEKVRNINSRRPRQLPSDANFEAEKVLLNRQTSEERKKSEEWMLDYALQKVISKLAPAQ 440
KV+ + P+ + E + + +++ +M+D + L P Q
Sbjct: 225 TAAKVKEVQKTPPKAKEKEGK---ETAAVAKHEQKDQYAFCRYMIDMFVH---GDLRPGQ 278
Query: 441 RQRVTLLVEAFETIRPVQDAENGPQTSATVESHANLIQSLDASSNHSKEEINDRRDFEVT 500
+ + + RP S T+E +EE + + +VT
Sbjct: 279 SPALPPPLPTVQASRPTP-------ASPTLEG--------------KEEEEKKKAEKKVT 317
Query: 501 ERARNDKNMDACKKNDESATVKSTATKAVKFPVCDTGIMEEEVTAEGEYKVQEKSIVKED 560
+ + D KK+D+ + + K P G ++ V A+ K EK KED
Sbjct: 318 SETKKKEKEDVKKKSDKDTAIDVEKKEPGKAPETKQGTIK--VVAQAAAKKDEK---KED 372
Query: 561 LKHG-TSTTDVPYGV-QERDQKYI------KKWHLMYKQAVLS--------NTGKYDNKL 604
K T + P G QE+ +KY+ KK H + + T K
Sbjct: 373 SKKTKTPVEEHPKGKKQEKKEKYVEPAKSSKKEHSAPSEKQVKAKTERAKEETSAASTKK 432
Query: 605 PVVGKDKEGR----EQGDAVFNGGNNSSCHNYNETDSDMDEEKKNVIELVQKAFDEILLP 660
V GK +E EQ G S+ E + DE+ + V+ + +
Sbjct: 433 AVPGKKEEKTTKTVEQEIRKEKSGKTSTASKDKEPEIKKDEKMPKADKEVKPKPPQSQVK 492
Query: 661 ETEDLSSDDRSKSR------------SYGSDELLEKSEGEREEMNATSFTETPKEAKKTE 708
+ E S + +++ S+G E + + E A T PK AKK E
Sbjct: 493 KEEKSESQVKKEAKPEQDIAKPEKTVSHGKPEEKVVKQVKATEKAAIEKTVKPKPAKKAE 552
Query: 709 NKPKSWSHLKKLIMLKRFVKALDKVRNINPRRPRELPSDANFEGEKVFLNRQTSEERKKS 768
++ K S K K K +V ++ + ++ + E L + RK+S
Sbjct: 553 HQEKE-SPTIKTDKPKPTSKETPEVTESGKKKIEKSEKESKEKAEMKHLKEEKVSTRKES 611
>NFH_MOUSE (P19246) Neurofilament triplet H protein (200 kDa
neurofilament protein) (Neurofilament heavy polypeptide)
(NF-H)
Length = 1087
Score = 42.7 bits (99), Expect = 0.006
Identities = 87/421 (20%), Positives = 146/421 (34%), Gaps = 80/421 (19%)
Query: 130 QLKSQKSTKKDGRSKQVGNAR-----------------KGTQKTKTVHSEDGNSQQNVKN 172
+ KS + K G +K G A+ K +K KT E S K+
Sbjct: 727 EAKSPAAVKSPGEAKSPGEAKSPAEAKSPAEAKSPIEVKSPEKAKTPVKEGAKSPAEAKS 786
Query: 173 VSMESSPFKPHDAPPSTVNECDTSTKDKHMVTDYEVLQKSSTQEEPKPGSTTSVAYGVQE 232
SP K PP+ + + KS +E KP +
Sbjct: 787 PEKAKSPVKEDIKPPAEAKSPEKA--------------KSPVKEGAKPPEK------AKP 826
Query: 233 RDQKYIKKWHLMYKHAVLSNTGKCDNKVPLVEKEKEGGEEDNEGNNSYRNYSETDSDMDD 292
D K + + + A + + +V KEK E E SE + +
Sbjct: 827 LDVKSPEAQTPVQEEATVPTDIRPPEQVKSPAKEKAKSPEKEEAKT-----SEKVAPKKE 881
Query: 293 EKKNVIELVQKAFDEILLPEVEDLSSEGHSKSRGNETDEVLLEKSGGKIEERNTTTFTES 352
E K+ ++ KA + E E ++++ ++ DE E K+EE+ T TE
Sbjct: 882 EVKSPVKEEVKAKEPPKKVEEEKTLPTPKTEAKESKKDEAPKEAPKPKVEEKKETP-TEK 940
Query: 353 PKEVPKMESKQKSWSHLKKVILLKRFVKALEKVRNINSRRPRQLPSDANFEAEKVLL--- 409
PK+ E+K++ KK + + A V+ +P++ EAE
Sbjct: 941 PKD-STAEAKKEEAGEKKKAVASEEETPAKLGVK--EEAKPKEKTETTKTEAEDTKAKEP 997
Query: 410 NRQTSEERKKSEEWMLDYALQKVISKLAPAQRQRVTLLVEAFETIRPVQDAENGPQTSAT 469
++ T E+ K EE + A ++ T + E+ +P E P+ A
Sbjct: 998 SKPTETEKPKKEE-------------MPAAPEKKDTKEEKTTESRKP----EEKPKMEAK 1040
Query: 470 VESHANLIQSLDASSNHSKEEINDRRDFEVTERARNDKNMDACKKNDESATVKSTATKAV 529
V+ + + SKE + TE+A + D + T + ATK
Sbjct: 1041 VK---------EDDKSLSKEPSKPK-----TEKAEKSSSTDQKESQPPEKTTEDKATKGE 1086
Query: 530 K 530
K
Sbjct: 1087 K 1087
Score = 35.4 bits (80), Expect = 0.95
Identities = 54/256 (21%), Positives = 95/256 (37%), Gaps = 27/256 (10%)
Query: 128 RRQLKSQKSTKKDGRSKQ-VGNARKGTQKTKTVHSEDGNSQQNVKNVSMESSPFKPHDAP 186
+ +K K ++K V K +K K + + +Q V+ + + +P +
Sbjct: 795 KEDIKPPAEAKSPEKAKSPVKEGAKPPEKAKPLDVKSPEAQTPVQEEATVPTDIRPPEQV 854
Query: 187 PSTVNECDTSTKDKHMVTDYEVLQKSSTQEEPKPGSTTSVAYGVQERDQKYIKKWHLMYK 246
S E S + + T +V K + P + + ++K + K
Sbjct: 855 KSPAKEKAKSPEKEEAKTSEKVAPKKEEVKSPVKEEVKAKEPPKKVEEEKTLPTPKTEAK 914
Query: 247 HAVLSNTGKCDNKVPLVEKEKEGGEEDNEGNNSYRNYSETDSDMDDEKKNVI-------- 298
+ K K P VE++KE E + + + E + EKK +
Sbjct: 915 ESKKDEAPKEAPK-PKVEEKKETPTEKPKDSTA-----EAKKEEAGEKKKAVASEEETPA 968
Query: 299 ------ELVQKAFDEILLPEVEDLSSEGHSKSRGNETDEVLLEKSGGKIEERNT----TT 348
E K E E ED ++ SK ET++ E+ E+++T TT
Sbjct: 969 KLGVKEEAKPKEKTETTKTEAEDTKAKEPSKP--TETEKPKKEEMPAAPEKKDTKEEKTT 1026
Query: 349 FTESPKEVPKMESKQK 364
+ P+E PKME+K K
Sbjct: 1027 ESRKPEEKPKMEAKVK 1042
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.308 0.126 0.342
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 141,845,816
Number of Sequences: 164201
Number of extensions: 6313207
Number of successful extensions: 20063
Number of sequences better than 10.0: 275
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 274
Number of HSP's that attempted gapping in prelim test: 19394
Number of HSP's gapped (non-prelim): 836
length of query: 1222
length of database: 59,974,054
effective HSP length: 122
effective length of query: 1100
effective length of database: 39,941,532
effective search space: 43935685200
effective search space used: 43935685200
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 72 (32.3 bits)
Medicago: description of AC125478.8