BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC125478.4 + phase: 0
(260 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ARRS_MAIZE (P13027) Anthocyanin regulatory R-S protein 50 7e-06
ARLC_MAIZE (P13526) Anthocyanin regulatory Lc protein 49 1e-05
EGL1_ARATH (Q9CAD0) Transcription factor EGL1 (ENHANCER OF GLABR... 48 3e-05
MYCM_XENLA (P35805) L-myc 2 protein 45 2e-04
MYCN_CHICK (P18444) N-myc proto-oncogene protein 45 2e-04
TT8_ARATH (Q9FT81) TRANSPARENT TESTA 8 protein (Basic helix-loop... 44 3e-04
TF15_CHICK (P79782) Transcription factor 15 (bHLH-EC2 protein) (... 43 7e-04
MYCN_SERCA (P26014) N-myc proto-oncogene protein 41 0.003
MYCN_HUMAN (P04198) N-myc proto-oncogene protein 41 0.003
MYCS_RAT (P23999) S-myc protein 40 0.004
MYCS_MOUSE (Q9Z304) S-myc protein 40 0.006
MYCN_XENLA (P24793) N-myc protein 40 0.007
MYCN_MARMO (Q61976) N-myc proto-oncogene protein (N-myc1) 40 0.007
MYC2_SPEBE (Q64210) N-myc 2 proto-oncogene protein 40 0.007
MYC2_MARMO (P20389) N-myc 2 proto-oncogene protein 40 0.007
PIF4_ARATH (Q8W2F3) Phytochrome-interacting factor 4 (Basic heli... 39 0.010
MYCN_MOUSE (P03966) N-myc proto-oncogene protein 39 0.010
MITF_HUMAN (O75030) Microphthalmia-associated transcription factor 39 0.010
PIF3_ARATH (O80536) Phytochrome-interacting factor 3 (Phytochrom... 39 0.013
MYCN_RAT (Q63379) N-myc proto-oncogene protein 39 0.013
>ARRS_MAIZE (P13027) Anthocyanin regulatory R-S protein
Length = 612
Score = 49.7 bits (117), Expect = 7e-06
Identities = 33/95 (34%), Positives = 51/95 (52%), Gaps = 10/95 (10%)
Query: 64 MAKKLNHNASERDRRKKINSLISSLRSLLPGEDQTKKMSIPVTISRVLKYIPDLQKQVQG 123
M+ NH SER RR+K+N + L+SLLP + K SI ++ + Y+ +LQ++VQ
Sbjct: 413 MSATKNHVMSERKRREKLNEMFLVLKSLLPSIHRVNKASI---LAETIAYLKELQRRVQE 469
Query: 124 LTKKKE------ELLSRISHRQEYAVNKESQRKKI 152
L +E E +R+ R N ES RK++
Sbjct: 470 LESSREPASRPSETTTRLITRPSRG-NNESVRKEV 503
>ARLC_MAIZE (P13526) Anthocyanin regulatory Lc protein
Length = 610
Score = 48.9 bits (115), Expect = 1e-05
Identities = 32/90 (35%), Positives = 49/90 (53%), Gaps = 10/90 (11%)
Query: 69 NHNASERDRRKKINSLISSLRSLLPGEDQTKKMSIPVTISRVLKYIPDLQKQVQGLTKKK 128
NH SER RR+K+N + L+SLLP + K SI ++ + Y+ +LQ++VQ L +
Sbjct: 416 NHVMSERKRREKLNEMFLVLKSLLPSIHRVNKASI---LAETIAYLKELQRRVQELESSR 472
Query: 129 E------ELLSRISHRQEYAVNKESQRKKI 152
E E +R+ R N ES RK++
Sbjct: 473 EPASRPSETTTRLITRPSRG-NNESVRKEV 501
>EGL1_ARATH (Q9CAD0) Transcription factor EGL1 (ENHANCER OF GLABRA3)
(Basic helix-loop-helix protein 2) (bHLH2) (AtbHLH002)
(AtMyc-146)
Length = 596
Score = 47.8 bits (112), Expect = 3e-05
Identities = 30/91 (32%), Positives = 50/91 (53%), Gaps = 5/91 (5%)
Query: 69 NHNASERDRRKKINSLISSLRSLLPGEDQTKKMSIPVTISRVLKYIPDLQKQVQGLTKKK 128
NH SE+ RR+K+N +LRS++P + K+SI + ++Y+ DLQK+VQ L +
Sbjct: 405 NHALSEKKRREKLNERFMTLRSIIPSISKIDKVSI---LDDTIEYLQDLQKRVQELESCR 461
Query: 129 E--ELLSRISHRQEYAVNKESQRKKIPNYNS 157
E + +RI+ + + E +R NS
Sbjct: 462 ESADTETRITMMKRKKPDDEEERASANCMNS 492
>MYCM_XENLA (P35805) L-myc 2 protein
Length = 344
Score = 45.1 bits (105), Expect = 2e-04
Identities = 37/119 (31%), Positives = 56/119 (46%), Gaps = 23/119 (19%)
Query: 42 PYHQFSSP--KEHVEIERPP-----SPKL--------------MAKKLNHNASERDRRKK 80
P H F S +E E+ PP SP++ +AK+ NHN ER RR
Sbjct: 217 PQHNFHSTVKEEPGEVTSPPELQPCSPQMPDSPLASGSSDSEDLAKRKNHNYLERKRRND 276
Query: 81 INSLISSLRSLLPGEDQTKKMSIPVTISRVLKYIPDLQKQVQGLTKKKEELLSRISHRQ 139
+ S +LR +P ++ K V +S+ +++ L Q Q LT +K +L SR H+Q
Sbjct: 277 LRSRFLALREEVPSLSRSTKTPKVVVLSKATEFLKGLVIQEQQLTAEKLKLWSR--HQQ 333
>MYCN_CHICK (P18444) N-myc proto-oncogene protein
Length = 441
Score = 44.7 bits (104), Expect = 2e-04
Identities = 32/123 (26%), Positives = 54/123 (43%), Gaps = 17/123 (13%)
Query: 29 HKEKNYASLEYSLPYHQFSSPKE-HVEIERPPSPKLMAK----------------KLNHN 71
H++ NYA+ + K+ E+ RP P + K + NHN
Sbjct: 305 HQQHNYAAPSPYMESEDVPPQKKLKAEVPRPVKPMIQPKSKSSSPRNSDSEDSERRRNHN 364
Query: 72 ASERDRRKKINSLISSLRSLLPGEDQTKKMSIPVTISRVLKYIPDLQKQVQGLTKKKEEL 131
ER RR + S +LR +P + +K + V + + +Y+ LQ + Q L +KE+L
Sbjct: 365 ILERQRRNDLRSSFLTLRDHVPELVKNEKAAKVVILKKATEYVHSLQAEEQKLLLEKEKL 424
Query: 132 LSR 134
+R
Sbjct: 425 QAR 427
>TT8_ARATH (Q9FT81) TRANSPARENT TESTA 8 protein (Basic
helix-loop-helix protein 42) (bHLH42) (AtbHLH042)
Length = 518
Score = 44.3 bits (103), Expect = 3e-04
Identities = 38/162 (23%), Positives = 69/162 (42%), Gaps = 32/162 (19%)
Query: 10 SYSNMGWLLEELEPESLISHKEKNYASLEYSLPYHQFSSPKEHVEIERPPSPKLMAKK-- 67
+YS L P SL+S + ++ S + + KEH +++ PS + + K+
Sbjct: 283 NYSQTVTTLLMSHPTSLLSDSVSTSSYIQSSFATWRVENGKEHQQVKTAPSSQWVLKQMI 342
Query: 68 -------------------LNHNASERDRRKKINSLISSLRSLLPGEDQTKKMSIPVTIS 108
L+H +ER RR+K+N +LRS++P + K+SI +
Sbjct: 343 FRVPFLHDNTKDKRLPREDLSHVVAERRRREKLNEKFITLRSMVPFVTKMDKVSI---LG 399
Query: 109 RVLKYIPDLQKQVQGLTKKKEELLSRISHRQEYAVNKESQRK 150
+ Y+ L+K+V L H Q++ + +RK
Sbjct: 400 DTIAYVNHLRKRVHE--------LENTHHEQQHKRTRTCKRK 433
>TF15_CHICK (P79782) Transcription factor 15 (bHLH-EC2 protein)
(Paraxis)
Length = 183
Score = 43.1 bits (100), Expect = 7e-04
Identities = 30/108 (27%), Positives = 51/108 (46%), Gaps = 10/108 (9%)
Query: 11 YSNMGWLLEELEPESLISHKEKNYASLEYSLPYHQFSSPKEHVEIERPPSPKLMAKKLNH 70
Y ++G L E+ E S +++Y E + ++ R P +M K+
Sbjct: 15 YPDIGMLSEDEENRSESDTSDQSYGCCE---------GAEARRKVPRKTGPMVMVKQRQA 65
Query: 71 -NASERDRRKKINSLISSLRSLLPGEDQTKKMSIPVTISRVLKYIPDL 117
NA ERDR + +N+ ++LR+L+P E +K+S T+ YI L
Sbjct: 66 ANARERDRTQSVNTAFTALRTLIPTEPVDRKLSKIETLRLASSYIAHL 113
>MYCN_SERCA (P26014) N-myc proto-oncogene protein
Length = 427
Score = 41.2 bits (95), Expect = 0.003
Identities = 33/124 (26%), Positives = 55/124 (43%), Gaps = 18/124 (14%)
Query: 29 HKEKNYASLEYSLPYHQFSSPKE-HVEIERPPSPKLMAK----------------KLNHN 71
H++ NYA+ + + K+ VE+ RP P + K + NHN
Sbjct: 290 HQQHNYAAPSPFVETEESPPQKKLKVEVSRPVKPTIQPKLKSSSPRNSDSEDSERRRNHN 349
Query: 72 ASERDRRKKINSLISSLRSLLPGE-DQTKKMSIPVTISRVLKYIPDLQKQVQGLTKKKEE 130
ER R + S +LR + E Q +K + V + + +Y+ LQ + Q L +KE+
Sbjct: 350 ILERQRANDLRSSFLTLRDHVLSELVQNEKAAKVVILKKATEYVHSLQAEEQKLLLEKEK 409
Query: 131 LLSR 134
L +R
Sbjct: 410 LQAR 413
>MYCN_HUMAN (P04198) N-myc proto-oncogene protein
Length = 464
Score = 40.8 bits (94), Expect = 0.003
Identities = 33/131 (25%), Positives = 56/131 (42%), Gaps = 33/131 (25%)
Query: 37 LEYSLPYHQ---FSSPKEHVEIE-RPPSPKLMA--------------------------- 65
L+ LP HQ +++P +VE E PP K+ +
Sbjct: 320 LKRCLPIHQQHNYAAPSPYVESEDAPPQKKIKSEASPRPLKSVIPPKAKSLSPRNSDSED 379
Query: 66 --KKLNHNASERDRRKKINSLISSLRSLLPGEDQTKKMSIPVTISRVLKYIPDLQKQVQG 123
++ NHN ER RR + S +LR +P + +K + V + + +Y+ LQ +
Sbjct: 380 SERRRNHNILERQRRNDLRSSFLTLRDHVPELVKNEKAAKVVILKKATEYVHSLQAEEHQ 439
Query: 124 LTKKKEELLSR 134
L +KE+L +R
Sbjct: 440 LLLEKEKLQAR 450
>MYCS_RAT (P23999) S-myc protein
Length = 429
Score = 40.4 bits (93), Expect = 0.004
Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 10/88 (11%)
Query: 57 RPPSPKLMAK----------KLNHNASERDRRKKINSLISSLRSLLPGEDQTKKMSIPVT 106
RP +P+L ++ + NHN ER RR + S +LR L+P +K + V
Sbjct: 328 RPKAPRLRSRSNSDLEDIERRRNHNRMERQRRDIMRSSFLNLRDLVPELVHNEKAAKVVI 387
Query: 107 ISRVLKYIPDLQKQVQGLTKKKEELLSR 134
+ + +YI LQ L ++E+L R
Sbjct: 388 LKKATEYIHTLQTDESKLLVEREKLYER 415
>MYCS_MOUSE (Q9Z304) S-myc protein
Length = 431
Score = 40.0 bits (92), Expect = 0.006
Identities = 28/101 (27%), Positives = 46/101 (44%), Gaps = 15/101 (14%)
Query: 49 PKEHVEIE-----RPPSPKLMAKK----------LNHNASERDRRKKINSLISSLRSLLP 93
P+ H + RP +P+L ++K NHN ER RR + S +LR L+P
Sbjct: 317 PRSHTSLALKCVFRPKAPRLGSRKNSDWENIERRRNHNRMERQRRDIMRSSFLNLRDLVP 376
Query: 94 GEDQTKKMSIPVTISRVLKYIPDLQKQVQGLTKKKEELLSR 134
+K + V + + +YI LQ L ++++L R
Sbjct: 377 ELVHNEKAAKVVILKKATEYIHTLQADESKLLVERKKLYER 417
>MYCN_XENLA (P24793) N-myc protein
Length = 437
Score = 39.7 bits (91), Expect = 0.007
Identities = 37/143 (25%), Positives = 58/143 (39%), Gaps = 34/143 (23%)
Query: 26 LISHKE-KNYASLEYSLPYHQ---FSSPKEHVEIER--PPSPKLM--------------- 64
L+S K +N L+ P HQ +++P +VE E PP KL
Sbjct: 281 LVSSKTAQNEVILKRCAPVHQQHNYAAPSPYVETEEVAPPQKKLRNELPRLVKNVVPTKP 340
Query: 65 -------------AKKLNHNASERDRRKKINSLISSLRSLLPGEDQTKKMSIPVTISRVL 111
++ NHN ER RR + S +LR +P + +K + V + +
Sbjct: 341 KSSSPRNYDSEDSERRRNHNILERQRRNDLRSSFLTLRDHVPELIKNEKAAKVVILKKAT 400
Query: 112 KYIPDLQKQVQGLTKKKEELLSR 134
+Y+ L Q L +KE+L R
Sbjct: 401 EYVHSLHADEQKLLLEKEKLQLR 423
>MYCN_MARMO (Q61976) N-myc proto-oncogene protein (N-myc1)
Length = 460
Score = 39.7 bits (91), Expect = 0.007
Identities = 21/69 (30%), Positives = 37/69 (53%)
Query: 66 KKLNHNASERDRRKKINSLISSLRSLLPGEDQTKKMSIPVTISRVLKYIPDLQKQVQGLT 125
++ NHN ER RR + S +LR +P + +K + V + + +Y+ LQ + L
Sbjct: 378 RRRNHNILERQRRNDLRSSFLTLRDHVPELVKNEKAAKVVILKKATEYVHSLQAEEHQLL 437
Query: 126 KKKEELLSR 134
+KE+L +R
Sbjct: 438 LEKEKLQAR 446
>MYC2_SPEBE (Q64210) N-myc 2 proto-oncogene protein
Length = 454
Score = 39.7 bits (91), Expect = 0.007
Identities = 21/69 (30%), Positives = 38/69 (54%)
Query: 66 KKLNHNASERDRRKKINSLISSLRSLLPGEDQTKKMSIPVTISRVLKYIPDLQKQVQGLT 125
++ NHN ER RR + S ++LR +P + +K + V + + +Y+ LQ + L
Sbjct: 372 RRRNHNILERQRRNDLRSSFTTLRDHVPELVKNEKAAKVVILKKACEYVHYLQAKEHQLL 431
Query: 126 KKKEELLSR 134
+KE+L +R
Sbjct: 432 MEKEKLQAR 440
>MYC2_MARMO (P20389) N-myc 2 proto-oncogene protein
Length = 454
Score = 39.7 bits (91), Expect = 0.007
Identities = 21/69 (30%), Positives = 38/69 (54%)
Query: 66 KKLNHNASERDRRKKINSLISSLRSLLPGEDQTKKMSIPVTISRVLKYIPDLQKQVQGLT 125
++ NHN ER RR + S ++LR +P + +K + V + + +Y+ LQ + L
Sbjct: 372 RRRNHNILERQRRNDLRSSFTTLRDHVPELVKNEKAAKVVILKKACEYVHYLQAKEHQLL 431
Query: 126 KKKEELLSR 134
+KE+L +R
Sbjct: 432 MEKEKLQAR 440
>PIF4_ARATH (Q8W2F3) Phytochrome-interacting factor 4 (Basic
helix-loop-helix protein 9) (bHLH9) (AtbHLH009) (Short
under red-light 2)
Length = 430
Score = 39.3 bits (90), Expect = 0.010
Identities = 21/53 (39%), Positives = 31/53 (57%), Gaps = 3/53 (5%)
Query: 70 HNASERDRRKKINSLISSLRSLLPGEDQTKKMSIPVTISRVLKYIPDLQKQVQ 122
HN SER RR +IN + +L+ L+P +T K SI + + Y+ LQ Q+Q
Sbjct: 262 HNLSERRRRDRINERMKALQELIPHCSKTDKASI---LDEAIDYLKSLQLQLQ 311
>MYCN_MOUSE (P03966) N-myc proto-oncogene protein
Length = 462
Score = 39.3 bits (90), Expect = 0.010
Identities = 34/127 (26%), Positives = 56/127 (43%), Gaps = 24/127 (18%)
Query: 29 HKEKNYASLEYSLPY--HQFSSPKEHVEIERPPSP-----KLMAKKL------------- 68
H++ NYA+ PY + + P++ ++ E P P AK L
Sbjct: 325 HQQHNYAAPS---PYVESEDAPPQKKIKSEASPRPLKSVVPAKAKSLSPRNSDSEDSERR 381
Query: 69 -NHNASERDRRKKINSLISSLRSLLPGEDQTKKMSIPVTISRVLKYIPDLQKQVQGLTKK 127
NHN ER RR + S +LR +P + +K + V + + +Y+ LQ L +
Sbjct: 382 RNHNILERQRRNDLRSSFLTLRDHVPELVKNEKAAKVVILKKATEYVHALQANEHQLLLE 441
Query: 128 KEELLSR 134
KE+L +R
Sbjct: 442 KEKLQAR 448
>MITF_HUMAN (O75030) Microphthalmia-associated transcription factor
Length = 526
Score = 39.3 bits (90), Expect = 0.010
Identities = 50/207 (24%), Positives = 84/207 (40%), Gaps = 6/207 (2%)
Query: 54 EIERPPSPKLMAKKLNHNASERDRRKKINSLISSLRSLLP-GEDQTKKMSIPVTISRVLK 112
E E K KK NHN ER RR IN I L +L+P D + + + +
Sbjct: 300 ESEARALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNKGTILKASVD 359
Query: 113 YIPDLQKQVQGLTKKKEELLSRISHRQEYAVNKESQRKKIPNYNSAFVVSTSRLNDTELV 172
YI LQ++ Q K+ E ++ H + + + + + + ++ ++ L +LV
Sbjct: 360 YIRKLQRE-QQRAKELENRQKKLEHANRHLLLRIQELEMQARAHGLSLIPSTGLCSPDLV 418
Query: 173 IHISSYEANKIPLSEILMCLENNGLLLLNSSSSKTFGGRLF-YNLHFQVDKTQRYECDDL 231
I E S+ L L+++ L ++ T G F NL + Q Y
Sbjct: 419 NRIIKQEPVLENCSQDL--LQHHADLTCTTTLDLTDGTITFNNNLGTGTEANQAYSVPTK 476
Query: 232 I-QKLSSIYEKQQNNHLGTMDQTINSV 257
+ KL I + +G D ++SV
Sbjct: 477 MGSKLEDILMDDTLSPVGVTDPLLSSV 503
>PIF3_ARATH (O80536) Phytochrome-interacting factor 3
(Phytochrome-associated protein 3) (Basic
helix-loop-helix protein 8) (bHLH8) (AtbHLH008)
Length = 524
Score = 38.9 bits (89), Expect = 0.013
Identities = 20/53 (37%), Positives = 32/53 (59%), Gaps = 3/53 (5%)
Query: 70 HNASERDRRKKINSLISSLRSLLPGEDQTKKMSIPVTISRVLKYIPDLQKQVQ 122
HN SER RR +IN + +L+ L+P ++ K S+ + ++Y+ LQ QVQ
Sbjct: 348 HNLSERRRRDRINEKMRALQELIPNCNKVDKASM---LDEAIEYLKSLQLQVQ 397
>MYCN_RAT (Q63379) N-myc proto-oncogene protein
Length = 462
Score = 38.9 bits (89), Expect = 0.013
Identities = 32/127 (25%), Positives = 58/127 (45%), Gaps = 24/127 (18%)
Query: 29 HKEKNYASLEYSLPY--HQFSSPKEHVEIER---------PPSPKLMA----------KK 67
H++ NYA+ PY + + P++ ++ E PP K ++ ++
Sbjct: 325 HQQHNYAAPS---PYVESEDAPPQKKIKSEASPRPLKSVVPPKAKSLSPRNSDSEDSERR 381
Query: 68 LNHNASERDRRKKINSLISSLRSLLPGEDQTKKMSIPVTISRVLKYIPDLQKQVQGLTKK 127
NHN ER RR + S +LR +P + +K + V + + +Y+ LQ L +
Sbjct: 382 RNHNILERQRRNDLRSSFLTLRDHVPELVKNEKAAKVVILKKATEYVHALQANEHQLLLE 441
Query: 128 KEELLSR 134
KE+L +R
Sbjct: 442 KEKLQAR 448
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.314 0.131 0.362
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,173,030
Number of Sequences: 164201
Number of extensions: 1152128
Number of successful extensions: 3477
Number of sequences better than 10.0: 200
Number of HSP's better than 10.0 without gapping: 125
Number of HSP's successfully gapped in prelim test: 76
Number of HSP's that attempted gapping in prelim test: 3306
Number of HSP's gapped (non-prelim): 237
length of query: 260
length of database: 59,974,054
effective HSP length: 108
effective length of query: 152
effective length of database: 42,240,346
effective search space: 6420532592
effective search space used: 6420532592
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 64 (29.3 bits)
Medicago: description of AC125478.4