BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC125477.15 - phase: 0
(738 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ZIP1_YEAST (P31111) Synaptonemal complex protein ZIP1 49 5e-05
GOA4_MOUSE (Q91VW5) Golgi autoantigen, golgin subfamily A member... 47 2e-04
IE68_SHV21 (Q01042) Immediate-early protein 46 3e-04
MLP2_YEAST (P40457) MLP2 protein (Myosin-like protein 2) 45 9e-04
BP1E_MOUSE (Q91ZU8) Bullous pemphigoid antigen 1, isoform 5 (BPA... 44 0.001
USO1_YEAST (P25386) Intracellular protein transport protein USO1 44 0.002
UN89_CAEEL (O01761) Muscle M-line assembly protein unc-89 (Uncoo... 44 0.002
NAB3_YEAST (P38996) Nuclear polyadenylated RNA-binding protein 3 43 0.003
CEC1_CAEEL (P34618) Chromo domain protein cec-1 43 0.003
MYSP_CAEEL (P10567) Paramyosin 43 0.003
MAPB_HUMAN (P46821) Microtubule-associated protein 1B (MAP 1B) [... 43 0.003
RPA1_MOUSE (O35134) DNA-directed RNA polymerase I largest subuni... 42 0.004
MYS_AEQIR (P24733) Myosin heavy chain, striated muscle 42 0.006
MYHA_HUMAN (P35580) Myosin heavy chain, nonmuscle type B (Cellul... 42 0.006
IF2_AQUAE (O67825) Translation initiation factor IF-2 42 0.006
HIBN_XENLA (P06180) Histone-binding protein N1/N2 42 0.006
ASF1_YEAST (P32447) Anti-silencing protein 1 42 0.008
MYSP_DIRIM (P13392) Paramyosin (Fragment) 41 0.010
JMJ_MOUSE (Q62315) Jumonji protein (Jumonji/ARID domain-containi... 41 0.010
MYHA_RAT (Q9JLT0) Myosin heavy chain, nonmuscle type B (Cellular... 40 0.017
>ZIP1_YEAST (P31111) Synaptonemal complex protein ZIP1
Length = 875
Score = 48.9 bits (115), Expect = 5e-05
Identities = 77/395 (19%), Positives = 172/395 (43%), Gaps = 57/395 (14%)
Query: 197 SLEQIVMDDENRGLRKVRE-EEGIPDLEQEEMDDEQEGCVVKRNVAEERTKIDVNSSKEE 255
S+E +D+ L + + EE + DL ++++ + NV T ++++S+ E
Sbjct: 341 SIENFFSEDKAHHLLQFNKFEERVHDLFEKKLQKHFDVAKDTLNVGLRNTTVELSSNTET 400
Query: 256 VMVEDVDKHKEEEKEKGTDAETETAQEISDSKINGGECFQVSKSQ---SSGHMESSHKEM 312
++ + + KE ++K + ++ E A+ I++ + + + SSG+++++
Sbjct: 401 MLKQQYEDIKENLEQKMSSSKDEMAKTINELSVTQKGLIMGVQEELLTSSGNIQTALVSE 460
Query: 313 AIDT-----EEAKEKTPGFTVYVNRRPENMAEV---------IKDLESQFTVVCNAANDV 358
+T ++A + + N AE+ IK LES+ + + + N +
Sbjct: 461 MNNTRQELLDDASQTAKNYASLENLVKAYKAEIVQSNEYEERIKHLESERSTLSSQKNQI 520
Query: 359 SALLEAKKAQYLSPSNELSASKL-LNPVALFRSSPSKIITNFSKTRDEVYDD-------- 409
+ L K+AQY +L A + ++ ++ S ++ N S +V D
Sbjct: 521 ISSLGTKEAQYEDLVKKLEAKNIEISQISGKEQSLTEKNENLSNELKKVQDQLEKLNNLN 580
Query: 410 -----------PSEEQCVFS-VSHQSTL-DRLYAWEKKLYQEVKSGTRVRLAYEK----- 451
S+ + V + VS TL R+ + E K T A++K
Sbjct: 581 ITTKSNYENKISSQNEIVKALVSENDTLKQRIQQLVEIKENEQKDHTTKLEAFQKNNEQL 640
Query: 452 -----KCLQLRNHDIKGEEPSSVDKTRAAIRDLHTQITVSIHSVEAISRRIETLRDE--E 504
+ +QL+ H+++ EE + + + T + S+ V+ + +++ L+ E +
Sbjct: 641 QKLNVEVVQLKAHELELEEQNR--HLKNCLEKKETGVEESLSDVKTLKQQVIVLKSEKQD 698
Query: 505 LHSQLLEL---LQGLAKMWKVMAECHQTQKQTLDE 536
+ ++ LEL L+ L ++ K + + Q+QK+ L++
Sbjct: 699 ITAEKLELQDNLESLEEVTKNLQQKVQSQKRELEQ 733
>GOA4_MOUSE (Q91VW5) Golgi autoantigen, golgin subfamily A member 4
(tGolgin-1)
Length = 2238
Score = 46.6 bits (109), Expect = 2e-04
Identities = 77/410 (18%), Positives = 170/410 (40%), Gaps = 61/410 (14%)
Query: 203 MDDENRGLRKVREEEGIPDLEQEEMDDE---QEGCVVKRNVA--------EERTKIDVNS 251
M+++ +GL ++R++ I E+EE+ E + V ++VA E+++ + V+
Sbjct: 1081 MEEKEQGLGELRQKVRIVQSEKEELTKEVARLKEAVSGQDVALAGLQGQLEQKSAVIVSL 1140
Query: 252 SKEEVMVEDVDKHKEEEKEKGTDAETETAQEISDSKINGGECFQVSKSQSSGHMESSHKE 311
S+ E ++ + E + + +E+++ K+ + Q+ S+ +G ++++ KE
Sbjct: 1141 SERESQLQSQVEKLEADLGCSLSEKLSLQEELAELKLLADKS-QLRVSELTGQVQAAEKE 1199
Query: 312 M--AIDTEEAKEKTPGFTVYVNRRPENMAEVIKDLESQFTVVCNAANDVSALLEAKKAQY 369
+ E +K+ + + N+ ++++L SQ C ALLEAK +
Sbjct: 1200 LQSCKSLHELSKKS------LEDKSLNLKSLLEELASQLDSRCER---TKALLEAKTNEL 1250
Query: 370 LSPSNELSASKLLNPVALFRSSPSKIITNFSKTRDEVYD------DPSEEQCVFSVSHQS 423
+ S + A +L ++ + + + + +V + +EEQ S Q
Sbjct: 1251 VCTSRD-KADAILARLSQCQRHTATVGEALLRRMGQVSELEAQLTQLTEEQRTLKSSFQQ 1309
Query: 424 TLDRLYAWEKKLYQEVKSGTRVRLAYEKKCLQLRNHDIKGEEPSSVDKTRAAIRDLHTQI 483
++L EK++ + L EK+ LQ G++ + + + I L ++
Sbjct: 1310 VTNQLEEKEKQI--KTMKADIEGLLTEKEALQQEG----GQQRQAASEKESCITQLKKEL 1363
Query: 484 TVSIHSVEAISRRIETLRDE---------ELHSQLLELLQGLAKMWKVMAECHQTQKQTL 534
+I++V + + + E +L +QL + K + A Q ++Q L
Sbjct: 1364 AENINAVTLLREELSEKKSEIASLSKQLSDLGAQLESSISPSDKAEAISALSKQHEEQEL 1423
Query: 535 D---EAKILIAGIDARKQSSMSITDPYRLARSASNLETELRNWRNTFESW 581
+ + L +DA + MS + ++ +W N F W
Sbjct: 1424 QLQAQLQELSLKVDALSKEKMSALE-------------QVDHWSNKFSEW 1460
Score = 36.2 bits (82), Expect = 0.32
Identities = 57/313 (18%), Positives = 124/313 (39%), Gaps = 31/313 (9%)
Query: 203 MDDENRGLRKVREEEGIPDLEQEEMDDEQEGCVVKRNVAEERTKIDVNSSKEEVMVEDVD 262
MD++ + + + EEE + L+ E QE + + +EE+ EE+
Sbjct: 457 MDEQMKAVERASEEERL-RLQHELSRVRQEAASMAKKNSEEQVAALQKLHAEEL------ 509
Query: 263 KHKEEEKEKGTDAETETAQEISDSKINGGECFQVSKSQSSGHMESSHKEMAIDTEEAKEK 322
KE+E + +A QE + + +Q ES +A++ E ++K
Sbjct: 510 ASKEQELSRRLEARERELQEQMRIALEKSRSEYLKLTQEKEQQES----LALEELELQKK 565
Query: 323 TPGFTVYVNRRPENMAEVIKDLESQFTVVCNAANDVSALLEAKKAQ--YLSPSNELSASK 380
+ + E+ ++ E+ T + + L+ K Q +L+ E +K
Sbjct: 566 -----AILTESENKLQELGQEAEAYRTRILELETSLEKSLQESKTQSEHLAVHLEAEKNK 620
Query: 381 LLNPVALFRSSPSKIITNFSKTRDEVYDDPSEEQCVFSVSHQSTLDRLYAWEKKLYQEVK 440
+ + + +D ++ +E S HQ+ ++ L ++ YQ+ K
Sbjct: 621 HNKELTALAEQHRTEVEGLQQQQDSLW---TERLQSLSQQHQAAVEEL----REKYQQEK 673
Query: 441 SGTRVRLAYEKKCL-QLRNHDIKGEEPSSVDKTRAAIRDLHTQITVSIHSVEAISRRIET 499
L EK+ L Q D+ + +DK + + + ++++ ++ + + ++ +
Sbjct: 674 DA----LLKEKESLFQAHIQDMNEKTLEKLDKKQMELESVSSELSEALRARDQLAEELSV 729
Query: 500 LR-DEELHSQLLE 511
LR D + Q LE
Sbjct: 730 LRGDADKMKQALE 742
Score = 32.3 bits (72), Expect = 4.6
Identities = 82/432 (18%), Positives = 162/432 (36%), Gaps = 50/432 (11%)
Query: 216 EEGIPDLEQEEMDDEQEGCVVKRNVAEERTK---IDVNSSKEEVMVEDVDKHKEEEKEKG 272
EE + ++Q+ +D E E ++ + V E T + + V+ +++ + E +EK
Sbjct: 838 EEQLAQMQQKVLDLETEKSLLTKQVVEMETHKKHVCEELDAQRAQVQQLERQRSELEEK- 896
Query: 273 TDAETETAQEISDSKINGGECFQVSKSQSSGHMES----SHKEMAIDTEEAKEKTPGFTV 328
+ ++ DS++ + QS E+ +E A + E K+
Sbjct: 897 ----VRSLAQLQDSQLKNSTVEKEQARQSLMEKENIILQMREEQAKEIEILKQTLSSKEE 952
Query: 329 YVNRRPENMAEVIKDLESQFTVVCNAANDVSALLEAKKAQYLSPSNELSAS--------K 380
++ E K+ E + + A ++ + Q EL + K
Sbjct: 953 SISILHEEYETKFKNQEKRMEKIKQKAKEMQETKKKLLDQEAKLKKELENTVLELSQKEK 1012
Query: 381 LLNPVALFRSSPSKIITNFSKTRDEVYDDPSEEQCVFSVSHQSTLDRLY-AWEKKLYQ-- 437
N L + + S T + ++ ++ + +HQ LD + AWEKKL Q
Sbjct: 1013 QFNAQILEMAQANS--AGISDTVSRLEENQRQQIESLTGAHQRKLDDVIEAWEKKLSQQA 1070
Query: 438 -----------EVKSGTRVRLAYEKKCLQLRNHDIKGEE---PSSVDKTRAAIRDLHTQI 483
E K L + + +Q ++ E +V A+ L Q+
Sbjct: 1071 AELRDKHAEQMEEKEQGLGELRQKVRIVQSEKEELTKEVARLKEAVSGQDVALAGLQGQL 1130
Query: 484 TVSIHSVEAISRRIETLRD--EELHSQL-------LELLQGLAKMWKVMAECHQTQKQTL 534
+ ++S R L+ E+L + L L L + LA++ K++A+ Q + L
Sbjct: 1131 EQKSAVIVSLSERESQLQSQVEKLEADLGCSLSEKLSLQEELAEL-KLLADKSQLRVSEL 1189
Query: 535 DEAKILIAGIDARKQSSMSITDPYRLARSASNLETELRNWRNTFESWITSQKSYIHALTG 594
++ A + + S+ L + NL++ L + +S K+ + A T
Sbjct: 1190 -TGQVQAAEKELQSCKSLHELSKKSLEDKSLNLKSLLEELASQLDSRCERTKALLEAKTN 1248
Query: 595 WLLRCMRCEPDA 606
L+ R + DA
Sbjct: 1249 ELVCTSRDKADA 1260
>IE68_SHV21 (Q01042) Immediate-early protein
Length = 407
Score = 46.2 bits (108), Expect = 3e-04
Identities = 33/130 (25%), Positives = 60/130 (45%), Gaps = 8/130 (6%)
Query: 199 EQIVMDDENRGLRKVREEEGIPDLEQEEMDDEQEGCVVKRNVAEERTKIDVNSSKEEVMV 258
E+ ++E + EEE + E EE + E+E + AEE + + ++EE
Sbjct: 103 EKEAEEEEAEEAEEEAEEEEAEEAEAEEEEAEEE--EAEEEEAEEAEEEEAEEAEEEAEE 160
Query: 259 EDVDKHKEEEKEKGTDA------ETETAQEISDSKINGGECFQVSKSQSSGHMESSHKEM 312
E+ ++ EEE E+ +A E E A+E +++ E + + E+ E
Sbjct: 161 EEAEEEAEEEAEEAEEAEEEAEEEAEEAEEAEEAEEAEEEAEEAEEEAEEAEEEAEEAEE 220
Query: 313 AIDTEEAKEK 322
A + EEA+E+
Sbjct: 221 AEEAEEAEEE 230
Score = 44.3 bits (103), Expect = 0.001
Identities = 33/119 (27%), Positives = 59/119 (48%), Gaps = 7/119 (5%)
Query: 205 DENRGLRKVREEEGIPDLEQEEMDDEQEGCVVKRNVAEERTKIDVNSSKEEVMVEDVDKH 264
+E G R+ EEE + E EE + E+ + AEE + + +EE E+ ++
Sbjct: 88 EEGEG-REEAEEEEAEEKEAEEEEAEEAEEEAEEEEAEEAEAEEEEAEEEEAEEEEAEEA 146
Query: 265 KEEEKEKGTD-AETETAQEISDSKINGGECFQVSKSQSSGHMESSHKEMAIDTEEAKEK 322
+EEE E+ + AE E A+E ++ E + +++ E+ E A + EEA+E+
Sbjct: 147 EEEEAEEAEEEAEEEEAEEEAEE-----EAEEAEEAEEEAEEEAEEAEEAEEAEEAEEE 200
Score = 43.9 bits (102), Expect = 0.002
Identities = 30/120 (25%), Positives = 56/120 (46%), Gaps = 4/120 (3%)
Query: 205 DENRGLRKVREEEGIPDLEQEEMDDEQEGCVVKRNVAEER--TKIDVNSSKEEVMVEDVD 262
+E K EEE + E+E ++E E + AEE + + ++EE E +
Sbjct: 97 EEEEAEEKEAEEEEAEEAEEEAEEEEAEEAEAEEEEAEEEEAEEEEAEEAEEEEAEEAEE 156
Query: 263 KHKEEEKEKGTDAETETAQEISDSKINGGECFQVSKSQSSGHMESSHKEMAIDTEEAKEK 322
+ +EEE E+ + E E A+E + E + +++ + E +E + EEA+E+
Sbjct: 157 EAEEEEAEEEAEEEAEEAEEAEEEAEEEAE--EAEEAEEAEEAEEEAEEAEEEAEEAEEE 214
Score = 41.2 bits (95), Expect = 0.010
Identities = 29/132 (21%), Positives = 59/132 (43%), Gaps = 4/132 (3%)
Query: 205 DENRGLRKVREEEGIPDLEQEEMDDEQEGCVVKRNVAEERTKIDVNSSKEEVMVEDVDKH 264
+E + EEE + E+EE ++ +E + AEE + + ++E + +
Sbjct: 129 EEEEAEEEEAEEEEAEEAEEEEAEEAEE--EAEEEEAEEEAEEEAEEAEEAEEEAEEEAE 186
Query: 265 KEEEKEKGTDAETETAQEISDSKINGGECFQVSKSQSSGHMESSHKEMAIDTEEAKEKTP 324
+ EE E+ +AE E + +++ E + +++ + E +E + EEA TP
Sbjct: 187 EAEEAEEAEEAEEEAEEAEEEAEEAEEEAEEAEEAEEAEEAEEEAEEAEEEEEEAGPSTP 246
Query: 325 GFTVY--VNRRP 334
Y V ++P
Sbjct: 247 RLPHYKVVGQKP 258
Score = 39.3 bits (90), Expect = 0.038
Identities = 31/124 (25%), Positives = 55/124 (44%), Gaps = 8/124 (6%)
Query: 199 EQIVMDDENRGLRKVREEEGIPDLEQEEMDDEQEGCVVKRNVAEERTKIDVNSSKEEVMV 258
E++ + E R R E EG E E ++ +E ++ EE + + EE
Sbjct: 65 EEVEEEGEERERRGEEEREGEGGEEGEGREEAEEEEAEEKEAEEEEAE-EAEEEAEEEEA 123
Query: 259 EDVDKHKEEEKEKGTDAETETAQEISDSKINGGECFQVSKSQSSGHMESSHKEMAIDTEE 318
E+ + +EE +E+ +AE E A+E + E + + E +E A + EE
Sbjct: 124 EEAEAEEEEAEEE--EAEEEEAEEAEEE-----EAEEAEEEAEEEEAEEEAEEEAEEAEE 176
Query: 319 AKEK 322
A+E+
Sbjct: 177 AEEE 180
Score = 34.7 bits (78), Expect = 0.93
Identities = 28/119 (23%), Positives = 55/119 (45%), Gaps = 14/119 (11%)
Query: 215 EEEGIPDLEQEEMDDEQEGCVVK----------RNVAEERTKIDVNSSKEEVMVEDVDKH 264
EE+ ++E+E + E+ G + R AEE + + +EE E+ ++
Sbjct: 60 EEQRREEVEEEGEERERRGEEEREGEGGEEGEGREEAEEEEAEEKEAEEEE--AEEAEEE 117
Query: 265 KEEEKEKGTDAETETA--QEISDSKINGGECFQVSKSQSSGHMESSHKEMAIDTEEAKE 321
EEE+ + +AE E A +E + + E + +++ E + +E + EEA+E
Sbjct: 118 AEEEEAEEAEAEEEEAEEEEAEEEEAEEAEEEEAEEAEEEAEEEEAEEEAEEEAEEAEE 176
Score = 33.9 bits (76), Expect = 1.6
Identities = 34/146 (23%), Positives = 62/146 (42%), Gaps = 9/146 (6%)
Query: 223 EQEEMDDEQEGCVVKRNVAEERTKI--DVNSSKEEVMVEDVDKHKEEEKEKGTDAETETA 280
EQ + E+EG +R EER + +EE E+ ++ KE E+E+ +AE E
Sbjct: 61 EQRREEVEEEGEERERRGEEEREGEGGEEGEGREEAEEEEAEE-KEAEEEEAEEAEEEAE 119
Query: 281 QEISDSKINGGECFQVSKSQSSGHMESSHKEMAIDTEEAKEKTPGFTVYVNRRPENMAEV 340
+E ++ E + +++ E+ +E EEA+E+ E AE
Sbjct: 120 EEEAEEAEAEEEEAEEEEAEEEEAEEAEEEEAEEAEEEAEEEE------AEEEAEEEAEE 173
Query: 341 IKDLESQFTVVCNAANDVSALLEAKK 366
++ E + A + EA++
Sbjct: 174 AEEAEEEAEEEAEEAEEAEEAEEAEE 199
>MLP2_YEAST (P40457) MLP2 protein (Myosin-like protein 2)
Length = 1679
Score = 44.7 bits (104), Expect = 9e-04
Identities = 73/330 (22%), Positives = 149/330 (45%), Gaps = 52/330 (15%)
Query: 208 RGLRKVREEEGIPDLEQEEMDDEQEGCVVKRNVAEERTKIDVNSSKEEVMVEDVDKHKEE 267
+ L+ V E+ ++ ++ D ++E ++R++ + + ++ +NS+K V ++++ K+
Sbjct: 1185 KSLKNVTEKNR--EIYKQLNDRQEEISRLQRDLIQTKEQVSINSNKILVYESEMEQCKQR 1242
Query: 268 EKE---KGTDAETETAQ----EISD--SKINGGEC--------FQVSKSQSSGHMESSHK 310
++ + DA+ + + EISD K++ E F K Q+ +++S K
Sbjct: 1243 YQDLSQQQKDAQKKDIEKLTNEISDLKGKLSSAENANADLENKFNRLKKQAHEKLDASKK 1302
Query: 311 EMAIDTEEAKE-KTPGFTVYVNRRPENMAEVIKDLESQFTVVCNAANDVSALLEAKKAQY 369
+ A T E E K + + EN A+VI DL+++ + DVS + +K Y
Sbjct: 1303 QQAALTNELNELKAIKDKLEQDLHFEN-AKVI-DLDTKLKAHELQSEDVSR--DHEKDTY 1358
Query: 370 LSPSNELSASKLLNPVALFRSSPS------KIITNFSKTRDEVYDDPSEEQCVFSVSHQS 423
+ E+ + K + +F+++ S K+ N K +D + D+ ++E
Sbjct: 1359 RTLMEEIESLK--KELQIFKTANSSSDAFEKLKVNMEKEKDRIIDERTKE---------- 1406
Query: 424 TLDRLYAWEKKLYQEVKSGTRVRLAYEKKCLQLRNHDIKGEEPSSVDKTRAAIRDLHTQI 483
+EKKL + + T Y K L+ +K E ++ + + A +L +I
Sbjct: 1407 -------FEKKLQETLNKSTSSEAEYSKDIETLKKEWLKEYEDETLRRIKEAEENLKKRI 1459
Query: 484 TVSIHS--VEAISRRIETLRDEELHSQLLE 511
+ + IS+R E L +EE +L E
Sbjct: 1460 RLPSEERIQKIISKRKEEL-EEEFRKKLKE 1488
Score = 31.6 bits (70), Expect = 7.9
Identities = 56/308 (18%), Positives = 127/308 (41%), Gaps = 26/308 (8%)
Query: 216 EEGIPDLEQEEMDDEQEGCVVKRNVAEERTKIDVNSSKEEVMVEDVDKHKEEEKEKG--- 272
E+ I +LE E + E + +N+ +E + K++ +ED + K KEK
Sbjct: 614 EKKIRELEAELSSTKVENSAIIQNLRKELLIYKKSQCKKKTTLEDFENFKGLAKEKERML 673
Query: 273 TDAETETAQEISDSKINGGECFQVSKSQSSGHMESSH---KEMAIDTEEAKEKTPGF--- 326
+A E+ K V K ++S + S K + + + K++T F
Sbjct: 674 EEAIDHLKAELEKQKSWVPSYIHVEKERASTELSQSRIKIKSLEYEISKLKKETASFIPT 733
Query: 327 TVYVNRRPENMAEVIKDLESQFTVVCNAANDVSALLEAKKAQYLSPSNELS------ASK 380
+ R E + K+L+ + + N+ +K+ QY + EL S
Sbjct: 734 KESLTRDFEQCCKEKKELQMRLKESEISHNENKMDFSSKEGQYKAKIKELENNLERLRSD 793
Query: 381 LLNPVALFRSSPSKIITNFSKTRDEVYDDPSEEQCVFS--VSHQSTLDRLYAWEKKLYQE 438
L + + S S + ++ + D + + + + + ++T+++L + + L +E
Sbjct: 794 LQSKIQEIESIRSCKDSQLKWAQNTIDDTEMKMKSLLTELSNKETTIEKLSSEIENLDKE 853
Query: 439 VKSGTRVRLAYEKKCLQLRNHDIKGEEPS---SVDKTRAAIRDLHTQITVSIHSVEAISR 495
++ + ++ K L +N D EP+ +++ + ++D ++QI + +
Sbjct: 854 LR-----KTKFQYKFLD-QNSDASTLEPTLRKELEQIQVQLKDANSQIQAYEEIISSNEN 907
Query: 496 RIETLRDE 503
+ L++E
Sbjct: 908 ALIELKNE 915
>BP1E_MOUSE (Q91ZU8) Bullous pemphigoid antigen 1, isoform 5 (BPA)
(Hemidesmosomal plaque protein) (Dystonia musculorum
protein) (Dystonin)
Length = 2611
Score = 44.3 bits (103), Expect = 0.001
Identities = 73/330 (22%), Positives = 141/330 (42%), Gaps = 25/330 (7%)
Query: 214 REEEGIPDLEQEEMDDEQEGCVVKRNVAEERTKIDVNSSKEEVMVEDVDKHKEEEKEKGT 273
R++ + DLEQ++ +E KR+ EE ++ ++ + V + + +EK+K
Sbjct: 1229 RKDSSLSDLEQQKRALVEE-LQRKRDHEEELLRLVKQMERDLAFQKQVAEKQLKEKQK-- 1285
Query: 274 DAETETAQEISDSKINGGECFQVSKSQSSGHMESSHKEMAIDTEEAKEKTPGFTVYVNRR 333
E E ++I++ + + E V++++ + KE EE K++ T+ NR+
Sbjct: 1286 -VELEARRKITEIQFSCRESAAVAQARPQRE-QGRQKE-----EELKQQVDELTL-ANRK 1337
Query: 334 PENMAEVIKDLESQFTVVCNAANDVSALLEAKKAQYLSPSNELSASKLLNPVALFRSSPS 393
E +K S + ++ + + LL+ K + + L A R S
Sbjct: 1338 AEKEMRELKYELSAVQLEKASSEEKARLLKDKLDETNNTLKCLKEDLERKDQAQERYSQQ 1397
Query: 394 --KIITNFSKTRDEVYDDPSEEQCVFSVSH--QSTLDRLYAWEKKLYQEVKSGTRVRLAY 449
+ ++T D+ + E + + H Q L+ L+ + KL +EV TR
Sbjct: 1398 LRDLGGQLNQTTDKAEEVRQEANDLKKIKHTYQLELESLHQEKGKLQREVDRVTRAHALA 1457
Query: 450 EK--KCLQLRNHDIKGEEPSSVDKTRAAIRDLHTQITVSIHSVEAISR-RIETLRDEELH 506
E+ +CL + H + E+ S ++ R R S H E R + L++ +
Sbjct: 1458 ERNIQCLNSQVHASRDEKDLSEERRRLCQRK-------SDHLKEEFERSHAQLLQNIQAE 1510
Query: 507 SQLLELLQGLAKMWKVMAECHQTQKQTLDE 536
+ + +Q L K + EC +T KQ +DE
Sbjct: 1511 KENNDKIQKLNKELEKSNECAETLKQKVDE 1540
>USO1_YEAST (P25386) Intracellular protein transport protein USO1
Length = 1790
Score = 43.5 bits (101), Expect = 0.002
Identities = 61/286 (21%), Positives = 116/286 (40%), Gaps = 28/286 (9%)
Query: 212 KVREEEGIPDLEQEEMDDEQEGCVVKRNVAEERTKIDVNSSKEEVMVEDVDKHKE--EEK 269
K + EEG+ LE+E ++ E K + + + I+ N ++ + +E + K E E+
Sbjct: 1479 KAKVEEGLKKLEEESSKEKAELEKSKEMMKKLESTIESNETELKSSMETIRKSDEKLEQS 1538
Query: 270 EKGTDAETETAQ-EISD--SKINGGECFQVSKSQSSGHMESSHKEMAIDTEEAKEKTPGF 326
+K + + + Q E SD S+IN +S +E ++ I+ + E
Sbjct: 1539 KKSAEEDIKNLQHEKSDLISRIN----------ESEKDIEELKSKLRIEAKSGSELET-- 1586
Query: 327 TVYVNRRPENMAEVIKDLESQFTVVCNAANDVSALLEAKKAQYLS--PSNELSASKLLNP 384
V + N E I+ + TV+ + D+ L+ K+A+ S EL S+L
Sbjct: 1587 ---VKQELNNAQEKIRINAEENTVLKSKLEDIERELKDKQAEIKSNQEEKELLTSRLKEL 1643
Query: 385 VALFRSSPSKIITNFSKTRDEV------YDDPSEEQCVFSVSHQSTLDRLYAWEKKLYQE 438
S+ K + + R EV E+ + + +++ AW++
Sbjct: 1644 EQELDSTQQKAQKSEEERRAEVRKFQVEKSQLDEKAMLLETKYNDLVNKEQAWKRDEDTV 1703
Query: 439 VKSGTRVRLAYEKKCLQLRNHDIKGEEPSSVDKTRAAIRDLHTQIT 484
K+ R EK +L N + + ++ R+ I DL +T
Sbjct: 1704 KKTTDSQRQEIEKLAKELDNLKAENSKLKEANEDRSEIDDLMLLVT 1749
Score = 41.6 bits (96), Expect = 0.008
Identities = 87/419 (20%), Positives = 168/419 (39%), Gaps = 75/419 (17%)
Query: 203 MDDENRGLRKVREEEG-------------IPDLEQEEMDDEQEGCVVKRNVAE-ERTKID 248
M EN L K EE I + QE+ + + E +++N+ + ++T D
Sbjct: 974 MQAENESLIKAVEESKNESSIQLSNLQNKIDSMSQEKENFQIERGSIEKNIEQLKKTISD 1033
Query: 249 VNSSKEEVMVEDVDKHKEEEKEKGT--DAETETAQEISDSKINGGECFQVSKSQSSGHME 306
+ +KEE++ + D K+E + + + + ETA +D +N + +++K++ E
Sbjct: 1034 LEQTKEEIISKS-DSSKDEYESQISLLKEKLETATTANDENVN--KISELTKTREELEAE 1090
Query: 307 -SSHKEMAIDTEEAKEKTPGFTVYVNRRPENMAEVIKDLESQFTVVCNAANDVSALLEAK 365
+++K + + E E + V E++ E LE + T N + A LE+
Sbjct: 1091 LAAYKNLKNELETKLETSEKALKEVKENEEHLKEEKIQLEKEATETKQQLNSLRANLES- 1149
Query: 366 KAQYLSPSNELSASKLLNPVALFRSSPSKIITNFSKTRDEVYDDPSEEQCVFSVSHQSTL 425
L +E A++L + + S+ DE+ E + +
Sbjct: 1150 ----LEKEHEDLAAQLKKYEEQIANKERQYNEEISQLNDEITSTQQENESI--------- 1196
Query: 426 DRLYAWEKKLYQEVKSGTRVRLAYEKKCLQLRNHDIKGEEPSSVDKTRAAIRDL------ 479
KK E++ E K ++ + + + S +D I++L
Sbjct: 1197 -------KKKNDELEG--------EVKAMKSTSEEQSNLKKSEIDALNLQIKELKKKNET 1241
Query: 480 -HTQITVSIHSVEAISRRIETLRDE---------ELHSQLLELLQGLAKMWKVMAECHQT 529
+ SI SVE+ + +I+ L+DE EL +L +K ++ E +
Sbjct: 1242 NEASLLESIKSVESETVKIKELQDECNFKEKEVSELEDKLKASEDKNSKYLELQKESEKI 1301
Query: 530 QKQTLD----EAKILIAGI-DARKQSSMSITDPYRLARSAS----NLETELRNWRNTFE 579
K+ LD E KI + I + K S ++ RL +++S N E +L +N +
Sbjct: 1302 -KEELDAKTTELKIQLEKITNLSKAKEKSESELSRLKKTSSEERKNAEEQLEKLKNEIQ 1359
Score = 32.7 bits (73), Expect = 3.5
Identities = 57/244 (23%), Positives = 101/244 (41%), Gaps = 64/244 (26%)
Query: 196 SSLEQIVMDDENRGLRKVREEEGIPDLEQEEMD-----DEQEGCV--------------- 235
SS+E I DE K EE I +L+ E+ D +E E +
Sbjct: 1523 SSMETIRKSDEKLEQSKKSAEEDIKNLQHEKSDLISRINESEKDIEELKSKLRIEAKSGS 1582
Query: 236 ----VKRNVAEERTKIDVNSSKEEVM---VEDVD----------KHKEEEKEKGTDAETE 278
VK+ + + KI +N+ + V+ +ED++ K +EEKE T E
Sbjct: 1583 ELETVKQELNNAQEKIRINAEENTVLKSKLEDIERELKDKQAEIKSNQEEKELLTSRLKE 1642
Query: 279 TAQEISDSKINGGEC----------FQVSKSQ---SSGHMESSHKEMAIDTEEA---KEK 322
QE+ ++ + FQV KSQ + +E+ + ++ ++ E+A E
Sbjct: 1643 LEQELDSTQQKAQKSEEERRAEVRKFQVEKSQLDEKAMLLETKYNDL-VNKEQAWKRDED 1701
Query: 323 TPGFTVYVNRRP-ENMAEVIKDLESQFTVVCNAANDVSAL---------LEAKKAQYLSP 372
T T R+ E +A+ + +L+++ + + A D S + L+ K A+Y S
Sbjct: 1702 TVKKTTDSQRQEIEKLAKELDNLKAENSKLKEANEDRSEIDDLMLLVTDLDEKNAKYRSK 1761
Query: 373 SNEL 376
+L
Sbjct: 1762 LKDL 1765
>UN89_CAEEL (O01761) Muscle M-line assembly protein unc-89
(Uncoordinated protein 89)
Length = 6632
Score = 43.5 bits (101), Expect = 0.002
Identities = 86/397 (21%), Positives = 145/397 (35%), Gaps = 70/397 (17%)
Query: 70 VTPPAKNKASPAVISISKHSSPTTIEFGPNTTTLKVNYLRPSG-------NPPISVEERP 122
V P K + SP +I + SS TTIE T T ++ + P V+E+P
Sbjct: 1480 VKSPVKKEKSPDATNIVEVSSETTIEKTETTMTTEMTHESEESRTSVKKEKTPEKVDEKP 1539
Query: 123 PSP--------EMVRVEMYSPMYQYGMDGFFGMQSQPMNASIFAYSPNNRPVIP--PASP 172
SP + + E+ SP+ + + P SP + P PASP
Sbjct: 1540 KSPTKKDKSPEKSITEEIKSPVKK---------EKSPEKVEEKPASPTKKEKSPEKPASP 1590
Query: 173 QSSQWDSFWNPFTSLDYFGYPNGSSLEQIVMDDENRGLRKVREEEGIPDLEQEEMDDEQE 232
+ +P S E+ V+++ L+ +E+ E+ DD+ +
Sbjct: 1591 TKKSENEVKSP--------TKKEKSPEKSVVEE----LKSPKEK------SPEKADDKPK 1632
Query: 233 GCVVKRNVAEERTKIDVNS-SKEEVMVEDVDKHKEEEKEKGTDAETETAQEISD--SKIN 289
K E+ DV S +K+E E V++ +K + +T E+ K
Sbjct: 1633 SPTKKEKSPEKSATEDVKSPTKKEKSPEKVEEKPTSPTKKESSPTKKTDDEVKSPTKKEK 1692
Query: 290 GGECFQVSKSQSSGHMESSHKEMAIDTEEAKEKTPGFTVYVNRRPENMAEVIKDLESQFT 349
+ + + + +S K + + + KEK+P +P++ + K E
Sbjct: 1693 SPQTVEEKPASPTKKEKSPEKSVVEEVKSPKEKSP---EKAEEKPKSPTKKEKSPEK--- 1746
Query: 350 VVCNAANDVSALLEAKKAQYLSPSNELSASKLLNPVALFRSSPSKIITN--FSKTRDEVY 407
SA E K S E SA + SSP K+ + S T+ E
Sbjct: 1747 ---------SAAEEVKSPTKKEKSPEKSAEEKPKSPTKKESSPVKMADDEVKSPTKKEKS 1797
Query: 408 DDPSEEQCVFSVSHQSTLDRLYAWEKKLYQEVKSGTR 444
+ EE+ + T EK +E+KS T+
Sbjct: 1798 PEKVEEKPASPTKKEKTP------EKSAAEELKSPTK 1828
>NAB3_YEAST (P38996) Nuclear polyadenylated RNA-binding protein 3
Length = 802
Score = 43.1 bits (100), Expect = 0.003
Identities = 51/201 (25%), Positives = 85/201 (41%), Gaps = 24/201 (11%)
Query: 194 NGSSLEQIVMDDENRGLRKVREEEGIPDLEQEEMDDEQEGCVVKRNVAEERTKIDVNSSK 253
N S+ + I D REEE E E+++DE+E K EE ++ +N+ +
Sbjct: 32 NSSADDGIEFDAPEEEREAEREEENEEQHELEDVNDEEE--EDKEEKGEENGEV-INTEE 88
Query: 254 EEVMV-------EDVDKHKEEEKEKGTDAETETAQEISDSKINGGECFQVSKSQSSGHME 306
EE +D D EEE+E+ D + + + D + E + + + S G
Sbjct: 89 EEEEEHQQKGGNDDDDDDNEEEEEEEEDDDDDDDDDDDDEEEEEEEEEEGNDNSSVG--S 146
Query: 307 SSHKEMAIDTEEAKEKTPGFTVYVNRRPENMAEVIKDLESQFTVVCNAAND--------- 357
S E D E+ K+KT V + R E + + KD++ + ND
Sbjct: 147 DSAAEDGEDEEDKKDKTKDKEVELRR--ETLEKEQKDVDEAIKKITREENDNTHFPTNME 204
Query: 358 -VSALLEAKKAQYLSPSNELS 377
V+ L K+ +Y+ SN L+
Sbjct: 205 NVNYDLLQKQVKYIMDSNMLN 225
Score = 31.6 bits (70), Expect = 7.9
Identities = 44/188 (23%), Positives = 77/188 (40%), Gaps = 23/188 (12%)
Query: 202 VMDDENRGLRKVREEEG--IPDLEQEEMDDEQEGCVVKRNVAEERTKIDVNSSKEEVMVE 259
V D+E + EE G I E+EE + +Q+G + E + + ++ +
Sbjct: 65 VNDEEEEDKEEKGEENGEVINTEEEEEEEHQQKGGNDDDDDDNEEEEEEEEDDDDDDDDD 124
Query: 260 DVDKHKEEEKEK--------GTDAETETAQEISDSKINGGECFQVSKSQSSGHMESSHKE 311
D D+ +EEE+E+ G+D+ E ++ D K + + E+ KE
Sbjct: 125 DDDEEEEEEEEEEGNDNSSVGSDSAAEDGEDEEDKK------DKTKDKEVELRRETLEKE 178
Query: 312 MAIDTEEAKEKTPGFTVYVNRRPENMAEVIKD-LESQFTVVCNAANDVSALLEAKKAQYL 370
D +EA +K P NM V D L+ Q + + S +L + Q+L
Sbjct: 179 QK-DVDEAIKKITREENDNTHFPTNMENVNYDLLQKQVKYIMD-----SNMLNLPQFQHL 232
Query: 371 SPSNELSA 378
++SA
Sbjct: 233 PQEEKMSA 240
>CEC1_CAEEL (P34618) Chromo domain protein cec-1
Length = 304
Score = 43.1 bits (100), Expect = 0.003
Identities = 27/85 (31%), Positives = 46/85 (53%), Gaps = 1/85 (1%)
Query: 199 EQIVMDDENRGLRKVREEEGIPDLEQE-EMDDEQEGCVVKRNVAEERTKIDVNSSKEEVM 257
E+ V DDE +K +E + P+ E+ E +DE+E V+ +E+ + D +E+V
Sbjct: 144 EEEVEDDEEPVPKKKKEVQEEPEEEESVEGEDEEESQEVEDLKEDEKMEEDEKEEEEDVQ 203
Query: 258 VEDVDKHKEEEKEKGTDAETETAQE 282
+E KEEE+EK + + E +E
Sbjct: 204 LESEKNEKEEEEEKVEEKKEEEEEE 228
Score = 32.7 bits (73), Expect = 3.5
Identities = 22/102 (21%), Positives = 45/102 (43%), Gaps = 1/102 (0%)
Query: 221 DLEQEEMDDEQEGCVVKRNVAEERTKIDVNSSKEEVMVEDVDKHKEEEKEKGTDAETETA 280
D+ + DE+ K++ AE+ +++ + ++V + EEE E + E +
Sbjct: 121 DIRPDSDTDEEHSSADKKSKAEDEEEVEDDEEPVPKKKKEVQEEPEEE-ESVEGEDEEES 179
Query: 281 QEISDSKINGGECFQVSKSQSSGHMESSHKEMAIDTEEAKEK 322
QE+ D K + + + +ES E + E+ +EK
Sbjct: 180 QEVEDLKEDEKMEEDEKEEEEDVQLESEKNEKEEEEEKVEEK 221
>MYSP_CAEEL (P10567) Paramyosin
Length = 882
Score = 42.7 bits (99), Expect = 0.003
Identities = 77/403 (19%), Positives = 167/403 (41%), Gaps = 44/403 (10%)
Query: 196 SSLEQIVMDDENRGLRKVREEEGIPDLEQEEMDDEQEGCVVKRNVAEERTKIDVNSSKEE 255
S L Q+ ++ ++ +R +EE I D E + + + + ++K D +
Sbjct: 274 SQLHQVQLELDS--VRTALDEESIA-----RSDAEHKLNLANTEITQWKSKFDAEVALHH 326
Query: 256 VMVEDVDKHKEEEKEKGTDAETETAQEISDSKINGGECFQVSKSQSSGHMESSHKEMAID 315
VED+ K +++ AE E EI KI+ Q+ K++S ++S + + +D
Sbjct: 327 EEVEDLRKKMLQKQ-----AEYEEQIEIMLQKIS-----QLEKAKS--RLQSEVEVLIVD 374
Query: 316 TEEAKEKTPGFTVYVNRRPENMAEVIKDLESQFTVVCNAANDVSALLEAKKAQYLSPSNE 375
E+A+ + R E + + +L+ + ++++ LEA + + + + E
Sbjct: 375 LEKAQNTI----ALLERAREQLERQVGELKVRI-------DEITVELEAAQRELRAVNAE 423
Query: 376 LSASKLLNPVALFRSSPSKIITNFSKTRDEVYDDPSEEQCVFSVSHQSTLD--RLYAWEK 433
L K L A+ + K DE+++ H+ L+ RL +
Sbjct: 424 LQKMKHLYEKAV--EQKEALARENKKLHDELHEAKEALADANRKLHELDLENARLAGEIR 481
Query: 434 KLYQEVKSGTRVRLAYEKKC------LQLRNHDIKGEEPSSVDKTRAAIRDLHTQITVSI 487
+L +K R E + LQ +++ ++ A ++L +I I
Sbjct: 482 ELQTALKEADAQRRDAENRAQRALAELQALRIEMERRLQEKEEEMEALRKNLQFEIDRLI 541
Query: 488 HSVEAISRRIET---LRDEELHSQLLELLQGLAKMWKVMAECHQTQKQTLDEAKILIAGI 544
++ R+++ ++ +++ EL + + + E +T K+ ++ KIL A +
Sbjct: 542 AALADAEARMKSEISRLKKKYQAEIAELEMTVDNLNRANIEAQKTIKKQSEQLKILQASL 601
Query: 545 DARKQSSMSITDPYRLA-RSASNLETELRNWRNTFESWITSQK 586
+ ++ + D Y LA R + L EL + ++ I ++K
Sbjct: 602 EDTQRQLQQVLDQYALAQRKVAALSAELEECKTALDNAIRARK 644
>MAPB_HUMAN (P46821) Microtubule-associated protein 1B (MAP 1B)
[Contains: MAP1 light chain LC1]
Length = 2468
Score = 42.7 bits (99), Expect = 0.003
Identities = 42/185 (22%), Positives = 82/185 (43%), Gaps = 10/185 (5%)
Query: 193 PNGSSLEQIVMDDENRGLRKVREEEGIPDLEQEEMDDEQEGCVVKRNVAEER-TKIDVNS 251
P S E++++ + K + E P + ++E+ ++E VK VAE++ T + +
Sbjct: 578 PKVESKEKVMVKKD-----KPVKTETKPSVTEKEVPSKEEPSPVKAEVAEKQATDVKPKA 632
Query: 252 SKEEVMVEDVDKHKEEEKEKGTDAETETAQEISDSKINGGECFQVSKSQSSGHMESSHKE 311
+KE+ + ++ E++KE+ + E A++ + I E + + + E +E
Sbjct: 633 AKEKTVKKETKVKPEDKKEEKEKPKKEVAKKEDKTPIKKEEKPKKEEVKKEVKKEIKKEE 692
Query: 312 MAIDTEEAKEKTPGFTVYVNRRPENMAEVIKDLESQFTVVCNAANDV----SALLEAKKA 367
+E K++TP V + E EV K+ + + D + L EAKK
Sbjct: 693 KKEPKKEVKKETPPKEVKKEVKKEEKKEVKKEEKEPKKEIKKLPKDAKKSSTPLSEAKKP 752
Query: 368 QYLSP 372
L P
Sbjct: 753 AALKP 757
>RPA1_MOUSE (O35134) DNA-directed RNA polymerase I largest subunit (EC
2.7.7.6) (RNA polymerase I 194 kDa subunit) (RPA194)
Length = 1717
Score = 42.4 bits (98), Expect = 0.004
Identities = 30/101 (29%), Positives = 48/101 (46%), Gaps = 13/101 (12%)
Query: 224 QEEMDDEQEGCVVKRNVAEERTKIDVNSSKEEVMVEDVDKHKEEEKEKGTDAETETAQEI 283
+EE D+E+EG +V AEE ++ ++E E+VD EEE G + E E QE
Sbjct: 1396 EEERDEEEEGNIVDAE-AEEGDADASDTKRKEKQEEEVDYESEEE---GEEEEEEEVQEE 1451
Query: 284 SDSKINGGECFQVSKSQSSGHMESSHKEMAIDTEEAKEKTP 324
+ K +G GH + + ++ EE+ +K P
Sbjct: 1452 GNIKGDG---------VHQGHEPDEEEHLGLEEEESSQKPP 1483
>MYS_AEQIR (P24733) Myosin heavy chain, striated muscle
Length = 1938
Score = 42.0 bits (97), Expect = 0.006
Identities = 78/398 (19%), Positives = 163/398 (40%), Gaps = 58/398 (14%)
Query: 196 SSLEQIVMDDENRGLRKVREEEGIPDLEQEEMDDEQEGCVVKRNVAE-ERTK--IDVNSS 252
+ LEQ +D+ L + ++ G D+E+ + EQ+ + NV + ER K ++ N
Sbjct: 1022 AKLEQ-ALDELEDNLEREKKVRG--DVEKAKRKVEQDLKSTQENVEDLERVKRELEENVR 1078
Query: 253 KEEVMVEDVDKHKEEE---------KEKGTDAETETAQEISDSKINGGECFQVSKSQSSG 303
++E + ++ E+E K K A E +E +++ N + +++ +
Sbjct: 1079 RKEAEISSLNSKLEDEQNLVSQLQRKIKELQARIEELEEELEAERNARAKVEKQRAELNR 1138
Query: 304 HMESSHKEMAIDTEEAKEKTPGFTVYVNRRPENMAEVIKDLESQFTVVCNAANDVSALLE 363
+E E+ +EA T +R + ++ +DLE A+ A +
Sbjct: 1139 ELE----ELGERLDEAGGATSAQIELNKKREAELLKIRRDLEE-------ASLQHEAQIS 1187
Query: 364 AKKAQYLSPSNELSASKLLNPVALFRSSPSKIITNFSKTRDEVYDDPSEEQCVFSVSHQS 423
A + ++ +NE++ + V + SK+ + + E+ D E Q ++ ++
Sbjct: 1188 ALRKKHQDAANEMA-----DQVDQLQKVKSKLEKDKKDLKREM--DDLESQMTHNMKNKG 1240
Query: 424 TLDRLYAWEKKLYQEVKSGTRVRLAYEKKCLQLRNHDIKGEEPSSVDKTRAAIRDLHTQI 483
+++ K ++ S RL ++ + E S + +A DL Q+
Sbjct: 1241 CSEKVM----KQFESQMSDLNARLEDSQRSIN--------ELQSQKSRLQAENSDLTRQL 1288
Query: 484 TVSIHSVEAISRRIETLRDEELHSQLLELLQGLAKMWKVMAECHQTQKQTLDEAKILIAG 543
+ H V +S+ +L SQL + + L + + ++ +E + + A
Sbjct: 1289 EDAEHRVSVLSKE-----KSQLSSQLEDARRSLEEETRARSKLQ-------NEVRNMHAD 1336
Query: 544 IDA-RKQSSMSITDPYRLARSASNLETELRNWRNTFES 580
+DA R+Q + R S E++ WR+ FES
Sbjct: 1337 MDAIREQLEEEQESKSDVQRQLSKANNEIQQWRSKFES 1374
>MYHA_HUMAN (P35580) Myosin heavy chain, nonmuscle type B (Cellular
myosin heavy chain, type B) (Nonmuscle myosin heavy
chain-B) (NMMHC-B)
Length = 1976
Score = 42.0 bits (97), Expect = 0.006
Identities = 87/400 (21%), Positives = 164/400 (40%), Gaps = 59/400 (14%)
Query: 198 LEQIVMDDENRGL----RKVREEEGIPDLEQEEMDDEQEGCVVKRNVAEERTKIDVNSSK 253
LE V ++E R K + + I DLE++ DE+EG K + + + + +
Sbjct: 927 LESRVEEEEERNQILQNEKKKMQAHIQDLEEQL--DEEEGARQKLQLEKVTAEAKIKKME 984
Query: 254 EEV-MVEDVDKHKEEEKEKGTDAETETAQEISDSKINGGECFQVSKSQSSGHMESSHKEM 312
EE+ ++ED + +EK+ D E + ++++ + K+++ + + + M
Sbjct: 985 EEILLLEDQNSKFIKEKKLMEDRIAECSSQLAEEE---------EKAKNLAKIRNKQEVM 1035
Query: 313 AIDTEEAKEKTPGFTVYVNRRPENMAEVIKDLESQFTVVCNAANDVSALLEAKKAQYL-- 370
D EE +K + + + DL+ Q + A D L AKK + L
Sbjct: 1036 ISDLEERLKKEEKTRQELEKAKRKLDGETTDLQDQIAEL-QAQIDELKLQLAKKEEELQG 1094
Query: 371 ----SPSNELSASKLLNPVALFRSSPSKIITNFSKTR------DEVYDDPSEEQCVFSVS 420
L + L V ++ +++ +F + ++ D SEE
Sbjct: 1095 ALARGDDETLHKNNALKVVRELQAQIAELQEDFESEKASRNKAEKQKRDLSEELEALKTE 1154
Query: 421 HQSTLDRLYAWEKKLYQEVKSGTRVRLAYEKKCL--QLRNHDIKGEEPSSVDKTRAAIRD 478
+ TLD A QE+++ +A KK L + +NH+ A I+D
Sbjct: 1155 LEDTLDTTAA-----QQELRTKREQEVAELKKALEEETKNHE-------------AQIQD 1196
Query: 479 LHTQITVSIHSVEAISRRIETLRDEELHSQLLELLQGLAKMWKVMAECHQTQKQTLDEAK 538
+ + ++ E +S ++E + + + L + QGL K +A + +Q E++
Sbjct: 1197 MRQRHATAL---EELSEQLE--QAKRFKANLEKNKQGLETDNKELACEVKVLQQVKAESE 1251
Query: 539 ILIAGIDARKQ---SSMSITDPYR--LARSASNLETELRN 573
+DA+ Q + +S D R LA AS L+ EL N
Sbjct: 1252 HKRKKLDAQVQELHAKVSEGDRLRVELAEKASKLQNELDN 1291
Score = 36.2 bits (82), Expect = 0.32
Identities = 51/235 (21%), Positives = 99/235 (41%), Gaps = 18/235 (7%)
Query: 176 QWDSFWNPFTSLDYFGYPNGSSLEQIVMDDENRGLRKVREEEGIPDLEQEEMDDEQEGCV 235
QW W FT + E D+E L KV+E++ + E EEM+ + + +
Sbjct: 833 QW---WRVFTKVKPLLQVTRQEEELQAKDEE---LLKVKEKQTKVEGELEEMERKHQQLL 886
Query: 236 VKRNVAEERTKIDVNSSKE-EVMVEDVDKHKEEEKEKGTDAETETAQEISDSKINGGECF 294
++N+ E+ + + E E M + K+E +E D E+ +E ++I
Sbjct: 887 EEKNILAEQLQAETELFAEAEEMRARLAAKKQELEEILHDLESRVEEEEERNQI-----L 941
Query: 295 QVSKSQSSGHMESSHKEMAIDTEEAKEKTPGFTVYVNRRPENMAE---VIKDLESQFTVV 351
Q K + H++ +++ + E A++K V + + M E +++D S+F
Sbjct: 942 QNEKKKMQAHIQDLEEQLD-EEEGARQKLQLEKVTAEAKIKKMEEEILLLEDQNSKFIKE 1000
Query: 352 CNAANDVSALLEAKKAQYLSPSNELSASKLLNPVALFRSSPSKIITNFSKTRDEV 406
D A ++ A+ + L +K+ N + S + + KTR E+
Sbjct: 1001 KKLMEDRIAECSSQLAEEEEKAKNL--AKIRNKQEVMISDLEERLKKEEKTRQEL 1053
>IF2_AQUAE (O67825) Translation initiation factor IF-2
Length = 805
Score = 42.0 bits (97), Expect = 0.006
Identities = 27/110 (24%), Positives = 54/110 (48%), Gaps = 8/110 (7%)
Query: 213 VREEEGIPDLEQEEMDDEQEGCVVKRNVAEERTKIDVNSSKEEVMVEDVDKHKEEEKEKG 272
V E+ P +E+ ++E++ V+ V EE+ K EV+VE++++ KEEE++K
Sbjct: 69 VTEQAQAPAEVEEKKEEEKKEEVIVEEVVEEK--------KPEVIVEEIEEKKEEEEKKE 120
Query: 273 TDAETETAQEISDSKINGGECFQVSKSQSSGHMESSHKEMAIDTEEAKEK 322
+ ++ +E+ + E + K E + + + EE KE+
Sbjct: 121 EEKPKKSVEELIKEILEKKEKEKEKKKVEKERKEEKVRVVEVKKEERKEE 170
Score = 33.5 bits (75), Expect = 2.1
Identities = 24/91 (26%), Positives = 49/91 (53%), Gaps = 3/91 (3%)
Query: 198 LEQIVMDDENRGLRKVREEEGIPDLEQEEMDDEQEGCVVKRNVAEERTKIDVNSSKEEVM 257
LE+ + E + + K R+EE + +E ++ + ++E K+ EE+ KI ++ + E+M
Sbjct: 136 LEKKEKEKEKKKVEKERKEEKVRVVEVKKEERKEEKKEEKKE--EEKPKIKMSKKEREIM 193
Query: 258 VEDVDKHKEEEKEKGTDAETETAQEISDSKI 288
++ E+EK+K E E ++ + KI
Sbjct: 194 -RKLEHAVEKEKKKQEKREKEKKKKEEEVKI 223
>HIBN_XENLA (P06180) Histone-binding protein N1/N2
Length = 589
Score = 42.0 bits (97), Expect = 0.006
Identities = 85/455 (18%), Positives = 166/455 (35%), Gaps = 64/455 (14%)
Query: 217 EGIPDLEQEEMDDEQEGCVVKRNVAEERTKIDVNSSKEEVMVEDV--------------- 261
EG+P+ ++EE + E++ + + +E+ + + + M ED
Sbjct: 103 EGMPEDDEEEAEKEEDPNIPSADNLDEKEREQLREQVYDAMAEDQRAPDDTSESEAKGKP 162
Query: 262 --DKHKEEEKEKGTDAETETAQEISDSKI-NGGECFQVSKSQSSGHMESSHKEMAIDTEE 318
D +E EK + + ET + D KI + + KS ES E ++ +E
Sbjct: 163 EGDSKDKEADEKMKNGQKETEKVTDDLKIDSASRDVPMDKSGKGEPPESKDAETLVEQKE 222
Query: 319 AKEKTPGFTVYVNRRPENMAEVIKDLESQFTVVCNAANDVSALLEAKKAQYLSPSNELSA 378
+K +T + +++ KDL + T AN E + + S ++E
Sbjct: 223 SKPET--------LKEKSIETKEKDLSKEKTDAKETANQSPDSTEVAEEKMDSEASESKE 274
Query: 379 SKLLNPVALFRSSPSKIITNFSKTRDEVYDDPSEEQCVFSVSHQSTLDR----------L 428
S + P + P + K +E + SEE + ++ T ++
Sbjct: 275 STSIPPTENEANKPD----DPEKMEEEEEGEDSEENEDGTEENEGTEEKETEEEDVGNLQ 330
Query: 429 YAWEK--------KLYQEVKSGTRVRLAYEK---KCLQLRNHDIKGEEPSSVDKTRAAIR 477
AWE K Q ++ + A++K C++ N+ E+ + +
Sbjct: 331 LAWEMLDLCKTIFKRQQSKEAQLKAAQAHQKLGEVCIESENYSQAVEDFLACLNIQKEHL 390
Query: 478 DLHTQITVSIHSVEAISRRIETLRDEELHSQLLELLQGLAKMWKVM--------AECHQT 529
+ H ++ H ++ + + + EE S + + + K V+ E
Sbjct: 391 EEHDRLLAETHYHLGLAYQYSS-KHEEAISHFTQSIGVIEKRMDVLTKQLEASVGELVDE 449
Query: 530 QKQTLDEAKILIAGIDARKQSSMSITDPYRLARSASNLETELRNWRNTF--ESWITSQKS 587
K+ +DE K L+ I + + S + A L+ L + F E+ TS S
Sbjct: 450 VKKEMDELKDLLPDIKEKIEDSKEAQKNATVTEKA--LKETLVGGSSGFSKENGSTSSSS 507
Query: 588 YIHALTGWLLRCMRCEPDASKLICSPRRSSSTHPL 622
+ + C D S L+ R++ PL
Sbjct: 508 AVEKSGDSTVPVTNCVSDISHLVRKKRKTEEESPL 542
>ASF1_YEAST (P32447) Anti-silencing protein 1
Length = 279
Score = 41.6 bits (96), Expect = 0.008
Identities = 29/92 (31%), Positives = 46/92 (49%), Gaps = 7/92 (7%)
Query: 201 IVMDDENRGLRKVREEEGIPDLEQEEMDDEQEGCVVKRNVAEERTKIDVNSSKEEVMVED 260
IV D+EN G E+ G+ D +EE DDE+E + ++ D + E E+
Sbjct: 151 IVWDNENEGDLYPPEQPGVDD--EEEEDDEEED-----DDEDDEDDEDDDQEDGEGEAEE 203
Query: 261 VDKHKEEEKEKGTDAETETAQEISDSKINGGE 292
+ +EEE+EK D ET +E D + + G+
Sbjct: 204 AAEEEEEEEEKTEDNETNLEEEEEDIENSDGD 235
>MYSP_DIRIM (P13392) Paramyosin (Fragment)
Length = 848
Score = 41.2 bits (95), Expect = 0.010
Identities = 68/369 (18%), Positives = 151/369 (40%), Gaps = 37/369 (10%)
Query: 230 EQEGCVVKRNVAEERTKIDVNSSKEEVMVEDVDKHKEEEKEKGTDAETETAQEISDSKIN 289
E + + + + ++K D + VED+ K +++ AE E EI KI+
Sbjct: 263 EHKLALANTEITQWKSKFDAEVALHHEEVEDLRKKMLQKQ-----AEYEEQIEIMLQKIS 317
Query: 290 GGECFQVSKSQSSGHMESSHKEMAIDTEEAKEKTPGFTVYVNRRPENMAEVIKDLESQFT 349
Q+ K++S ++S + + +D E+A+ + R E + + + +L+ +
Sbjct: 318 -----QLEKAKS--RLQSEVEVLIVDLEKAQNTI----AILERAKEQLEKTVNELKVRI- 365
Query: 350 VVCNAANDVSALLEAKKAQYLSPSNELSASKLLNPVALFRSSPSKIITNFSKTRDEVYDD 409
++++ LEA + + + EL K L A+ + K +D++++
Sbjct: 366 ------DELTVELEAAQREARAALAELQKMKNLYEKAI--EQKEALARENKKLQDDLHEA 417
Query: 410 PSEEQCVFSVSHQSTLD--RLYAWEKKLYQEVKSGTRVRLAYEKKC---------LQLRN 458
H+ L+ RL ++L +K R E + L++
Sbjct: 418 KEALADANRKLHELDLENARLAGEIRELQTALKESEAARRDAENRAQRALAELQQLRIEM 477
Query: 459 HDIKGEEPSSVDKTRAAIRDLHTQITVSIHSVEAISRRIETLRDEELHSQLLELLQGLAK 518
E+ ++ R ++ ++T ++ EA + + ++ +++ EL +
Sbjct: 478 ERRLQEKEEEMEALRKNMQFEIDRLTAALADAEARMKAEISRLKKKYQAEIAELEMTVDN 537
Query: 519 MWKVMAECHQTQKQTLDEAKILIAGIDARKQSSMSITDPYRLA-RSASNLETELRNWRNT 577
+ + E +T K+ ++ KIL A ++ ++ D Y LA R S L EL +
Sbjct: 538 LNRANIEAQKTIKKQSEQLKILQASLEDTQRQLQQTLDQYALAQRKVSALSAELEECKVA 597
Query: 578 FESWITSQK 586
++ I ++K
Sbjct: 598 LDNAIRARK 606
>JMJ_MOUSE (Q62315) Jumonji protein (Jumonji/ARID domain-containing
protein 2)
Length = 1234
Score = 41.2 bits (95), Expect = 0.010
Identities = 61/237 (25%), Positives = 94/237 (38%), Gaps = 29/237 (12%)
Query: 251 SSKEEVMVEDVDKHKEEEKEKGTDAETETAQEISDSK----INGGECFQVSKSQSSGHME 306
SS++E VE+ D E+ K +A + K ++ G F S S+S+ E
Sbjct: 178 SSQDEEDVEEEDDETEDVKATTNNASSSCQSTPRKGKTHKHVHNGHVFNGS-SRSAREKE 236
Query: 307 SSHKEMAIDTEEAKEKTPGFTVYVNRRPENMAEVIKDLESQFTVVCNAANDVSALLEAKK 366
+HK +KE TPG + R ++ E +Q T AA+ L
Sbjct: 237 PAHKH------RSKEATPGKEKHSEPRADSRREQASG--AQPTAASAAASSAKGLA---- 284
Query: 367 AQYLSPSNELSASKLLNPVA----LFRSSPSKIITNFSKTRDEVYDDPSEEQCVFSVSHQ 422
A + P + SA L V+ + R S TN +K EV PS+ +V +
Sbjct: 285 ANHQPPPSHRSAQDLRKQVSKVNGVTRMSSLGAGTNSAKKIREVRPSPSK-----TVKYT 339
Query: 423 STLDRLYAWEKKLYQEVKSGTRVRLAYEKKCLQLRNHDIKGEEPSSVDKTRAAIRDL 479
+T+ + K +E+ T+ K NH I G+ SS KTR + L
Sbjct: 340 ATVTKGTVTYTKAKRELVKETKPN---HHKPSSAVNHTISGKTESSNAKTRKQVLSL 393
>MYHA_RAT (Q9JLT0) Myosin heavy chain, nonmuscle type B (Cellular
myosin heavy chain, type B) (Nonmuscle myosin heavy
chain-B) (NMMHC-B)
Length = 1976
Score = 40.4 bits (93), Expect = 0.017
Identities = 86/393 (21%), Positives = 158/393 (39%), Gaps = 45/393 (11%)
Query: 198 LEQIVMDDENRGL----RKVREEEGIPDLEQEEMDDEQEGCVVKRNVAEERTKIDVNSSK 253
LE V +E R K + + I DLE++ DE+EG K + + + + +
Sbjct: 927 LESRVEGEEERNQILQNEKKKMQAHIQDLEEQL--DEEEGARQKLQLEKVTAEAKIKKME 984
Query: 254 EEV-MVEDVDKHKEEEKEKGTDAETETAQEISDSKINGGECFQVSKSQS---SGHMESSH 309
EEV ++ED + +EK+ D E + ++++ + ++ Q S E
Sbjct: 985 EEVLLLEDQNSKFIKEKKLMEDRIAECSSQLAEEEEKAKNLAKIRNKQEVMISDLEERLK 1044
Query: 310 KEMAI--DTEEAKEKTPGFTVYVNRRPENMAEVIKDLESQFTVVCNAANDVSALLEAKKA 367
KE + E+AK K G T + + + + +L+ Q T ++ L
Sbjct: 1045 KEEKTRQELEKAKRKLDGETTDLQDQIAELQAQVDELKVQLT---KKEEELQGALARGDD 1101
Query: 368 QYLSPSNELSASKLLNPVALFRSSPSKIITNFSKTRDEVYDDPSEEQCVFSVSHQSTLDR 427
+ L +N L ++ L + ++ D SEE + TLD
Sbjct: 1102 ETLHKNNALKVARELQAQIAELQEDFESEKASRNKAEKQKRDLSEELEALKTELEDTLDT 1161
Query: 428 LYAWEKKLYQEVKSGTRVRLAYEKKCL--QLRNHDIKGEEPSSVDKTRAAIRDLHTQITV 485
A QE+++ +A KK L + +NH+ A I+D+ +
Sbjct: 1162 TAA-----QQELRTKREQEVAELKKALEDETKNHE-------------AQIQDMRQRHAT 1203
Query: 486 SIHSVEAISRRIETLRDEELHSQLLELLQGLAKMWKVMAECHQTQKQTLDEAKILIAGID 545
++ E +S ++E + + + L + QGL K +A + +Q E++ +D
Sbjct: 1204 AL---EELSEQLE--QAKRFKANLEKNKQGLETDNKELACEVKVLQQVKAESEHKRKKLD 1258
Query: 546 ARKQ---SSMSITDPYR--LARSASNLETELRN 573
A+ Q + +S D R LA A+ L+ EL N
Sbjct: 1259 AQVQELHAKVSEGDRLRVELAEKANKLQNELDN 1291
Score = 34.7 bits (78), Expect = 0.93
Identities = 51/235 (21%), Positives = 98/235 (41%), Gaps = 18/235 (7%)
Query: 176 QWDSFWNPFTSLDYFGYPNGSSLEQIVMDDENRGLRKVREEEGIPDLEQEEMDDEQEGCV 235
QW W FT + E D+E L KV+E++ + E EEM+ + + +
Sbjct: 833 QW---WRVFTKVKPLLQVTRQEEELQAKDEE---LLKVKEKQTKVEGELEEMERKHQQLL 886
Query: 236 VKRNVAEERTKIDVNSSKE-EVMVEDVDKHKEEEKEKGTDAETETAQEISDSKINGGECF 294
++N+ E+ + + E E M + K+E +E D E+ E ++I
Sbjct: 887 EEKNILAEQLQAETELFAEAEEMRARLAAKKQELEEILHDLESRVEGEEERNQI-----L 941
Query: 295 QVSKSQSSGHMESSHKEMAIDTEEAKEKTPGFTVYVNRRPENMAE---VIKDLESQFTVV 351
Q K + H++ +++ + E A++K V + + M E +++D S+F
Sbjct: 942 QNEKKKMQAHIQDLEEQLD-EEEGARQKLQLEKVTAEAKIKKMEEEVLLLEDQNSKFIKE 1000
Query: 352 CNAANDVSALLEAKKAQYLSPSNELSASKLLNPVALFRSSPSKIITNFSKTRDEV 406
D A ++ A+ + L +K+ N + S + + KTR E+
Sbjct: 1001 KKLMEDRIAECSSQLAEEEEKAKNL--AKIRNKQEVMISDLEERLKKEEKTRQEL 1053
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.313 0.128 0.361
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 82,806,329
Number of Sequences: 164201
Number of extensions: 3501098
Number of successful extensions: 14275
Number of sequences better than 10.0: 371
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 336
Number of HSP's that attempted gapping in prelim test: 12257
Number of HSP's gapped (non-prelim): 1205
length of query: 738
length of database: 59,974,054
effective HSP length: 118
effective length of query: 620
effective length of database: 40,598,336
effective search space: 25170968320
effective search space used: 25170968320
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 70 (31.6 bits)
Medicago: description of AC125477.15