BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC125477.1 + phase: 2 /pseudo/partial
(358 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SYK_ORYSA (Q6F2U9) Lysyl-tRNA synthetase (EC 6.1.1.6) (Lysine--t... 531 e-150
SYK_ARATH (Q9ZPI1) Lysyl-tRNA synthetase (EC 6.1.1.6) (Lysine--t... 515 e-146
SYK_LYCES (Q43776) Lysyl-tRNA synthetase (EC 6.1.1.6) (Lysine--t... 452 e-127
SYK_CRILO (P37879) Lysyl-tRNA synthetase (EC 6.1.1.6) (Lysine--t... 410 e-114
SYK_MOUSE (Q99MN1) Lysyl-tRNA synthetase (EC 6.1.1.6) (Lysine--t... 410 e-114
SYK_HUMAN (Q15046) Lysyl-tRNA synthetase (EC 6.1.1.6) (Lysine--t... 407 e-113
SYK_CAEEL (Q22099) Lysyl-tRNA synthetase (EC 6.1.1.6) (Lysine--t... 373 e-103
SYKC_YEAST (P15180) Lysyl-tRNA synthetase, cytoplasmic (EC 6.1.1... 350 3e-96
SYK_THEMA (Q9X231) Lysyl-tRNA synthetase (EC 6.1.1.6) (Lysine--t... 264 2e-70
SYK_CLOTE (Q899G7) Lysyl-tRNA synthetase (EC 6.1.1.6) (Lysine--t... 263 7e-70
SYK_AQUAE (O67258) Lysyl-tRNA synthetase (EC 6.1.1.6) (Lysine--t... 259 1e-68
SYK_BACTN (Q8A5W4) Lysyl-tRNA synthetase (EC 6.1.1.6) (Lysine--t... 257 3e-68
SYK_BACSU (P37477) Lysyl-tRNA synthetase (EC 6.1.1.6) (Lysine--t... 253 5e-67
SYK_BACHD (Q9KGG4) Lysyl-tRNA synthetase (EC 6.1.1.6) (Lysine--t... 253 7e-67
SYK_LEPIN (Q8F4P5) Lysyl-tRNA synthetase (EC 6.1.1.6) (Lysine--t... 252 9e-67
SYK_THETN (Q8R7N1) Lysyl-tRNA synthetase (EC 6.1.1.6) (Lysine--t... 252 1e-66
SYK_CLOPE (Q8XHL8) Lysyl-tRNA synthetase (EC 6.1.1.6) (Lysine--t... 251 3e-66
SYK_BACST (Q9RHV9) Lysyl-tRNA synthetase (EC 6.1.1.6) (Lysine--t... 250 4e-66
SYK2_METAC (Q8TSN5) Lysyl-tRNA synthetase 2 (EC 6.1.1.6) (Lysine... 249 8e-66
SYK_PORGI (Q7MUV7) Lysyl-tRNA synthetase (EC 6.1.1.6) (Lysine--t... 248 1e-65
>SYK_ORYSA (Q6F2U9) Lysyl-tRNA synthetase (EC 6.1.1.6) (Lysine--tRNA
ligase) (LysRS)
Length = 602
Score = 531 bits (1368), Expect = e-150
Identities = 261/375 (69%), Positives = 307/375 (81%), Gaps = 19/375 (5%)
Query: 2 SDLDEVEFCKFHSTVERGDTVGVIGFPGKSEEGDLSIFPKTFTVLSHCLHLMPDQKSTAA 61
S+L++ EF KFHST++RGD VGV G+PGKS+ G+LSIFPK VLS CLH+MP QKS +
Sbjct: 169 SELEDNEFIKFHSTLKRGDIVGVCGYPGKSKRGELSIFPKKIVVLSPCLHMMPRQKSEGS 228
Query: 62 AAANNANLMES*NIH------------------FKGSDIREIFHTRNRIISYIQRHLDDL 103
A NI ++R IF TR++++S+I++ LD L
Sbjct: 229 AVPTPWAPGMGRNIEKYVLRDQETRYRQRYLDLMVNHEVRHIFKTRSKVVSFIRKFLDGL 288
Query: 104 DFMEVETPMMNKIAGGAAARPFVTHHNELDLKLFMRIAPELYLKQLVVGGMERVYEIGKQ 163
DF+EVETPMMN IAGGAAARPFVTHHNEL+++L+MRIAPELYLK+LVVGG++RVYEIGKQ
Sbjct: 289 DFLEVETPMMNMIAGGAAARPFVTHHNELNMRLYMRIAPELYLKELVVGGLDRVYEIGKQ 348
Query: 164 FRNEDIDLTHNPEFTTCEFYMAYNEYNDLMEITERMLSGLVQELTNGSYKIKYHANGVDK 223
FRNE IDLTHNPEFTTCEFYMAY +YNDL+E+TE MLSG+V+ELT G YKIKYHANGV+K
Sbjct: 349 FRNEGIDLTHNPEFTTCEFYMAYADYNDLIELTETMLSGMVKELT-GGYKIKYHANGVEK 407
Query: 224 DPIEIDFTPPFRRIDMIEELESMAGLSIPKDLATDEANQYLKNACLEYDIKCAPAQTTAR 283
PIEIDFTPPFR+IDMIEELE+MA L+IPKDL++DEAN+YL +AC +YD+KC P QTT R
Sbjct: 408 PPIEIDFTPPFRKIDMIEELEAMAKLNIPKDLSSDEANKYLIDACAKYDVKCPPPQTTTR 467
Query: 284 LLDKLAGHFLEETCVNPTFIINHPEIMSPLAKWHRTKPGLTERFELIVNKLKLSNAYTEL 343
LLDKL GHFLEETCVNPTFIINHPEIMSPLAKWHR++PGLTERFEL VNK ++ NAYTEL
Sbjct: 468 LLDKLVGHFLEETCVNPTFIINHPEIMSPLAKWHRSRPGLTERFELFVNKHEVCNAYTEL 527
Query: 344 NDPVVQRQRFAEQLK 358
NDPVVQRQRF EQLK
Sbjct: 528 NDPVVQRQRFEEQLK 542
>SYK_ARATH (Q9ZPI1) Lysyl-tRNA synthetase (EC 6.1.1.6) (Lysine--tRNA
ligase) (LysRS)
Length = 626
Score = 515 bits (1327), Expect = e-146
Identities = 255/376 (67%), Positives = 303/376 (79%), Gaps = 20/376 (5%)
Query: 2 SDLDEVEFCKFHSTVERGDTVGVIGFPGKSEEGDLSIFPKTFTVLSHCLHLMPDQKSTAA 61
S LDE EF K HS +RGD VGVIGFPGK++ G+LSIFP++F +LSHCLH+MP +
Sbjct: 177 SGLDEAEFLKLHSNAKRGDIVGVIGFPGKTKRGELSIFPRSFILLSHCLHMMPRKADNVN 236
Query: 62 AAA-----------NNANLMES*NIHFK--------GSDIREIFHTRNRIISYIQRHLDD 102
A A +++ ++ ++R+IF TR +IISY++R LD+
Sbjct: 237 AKKPEIWVPGQTRNPEAYVLKDQESRYRQRHLDMILNVEVRQIFRTRAKIISYVRRFLDN 296
Query: 103 LDFMEVETPMMNKIAGGAAARPFVTHHNELDLKLFMRIAPELYLKQLVVGGMERVYEIGK 162
+F+EVETPMMN IAGGAAARPFVTHHN+LD++L+MRIAPELYLKQL+VGG+ERVYEIGK
Sbjct: 297 KNFLEVETPMMNMIAGGAAARPFVTHHNDLDMRLYMRIAPELYLKQLIVGGLERVYEIGK 356
Query: 163 QFRNEDIDLTHNPEFTTCEFYMAYNEYNDLMEITERMLSGLVQELTNGSYKIKYHANGVD 222
QFRNE IDLTHNPEFTTCEFYMA+ +YNDLME+TE MLSG+V+ELT G YKIKY+ANG D
Sbjct: 357 QFRNEGIDLTHNPEFTTCEFYMAFADYNDLMEMTEVMLSGMVKELT-GGYKIKYNANGYD 415
Query: 223 KDPIEIDFTPPFRRIDMIEELESMAGLSIPKDLATDEANQYLKNACLEYDIKCAPAQTTA 282
KDPIEIDFTPPFRRI+MI ELE +A L+IPKDLA++EAN+YL +AC +D+KC P QTTA
Sbjct: 416 KDPIEIDFTPPFRRIEMIGELEKVAKLNIPKDLASEEANKYLIDACARFDVKCPPPQTTA 475
Query: 283 RLLDKLAGHFLEETCVNPTFIINHPEIMSPLAKWHRTKPGLTERFELIVNKLKLSNAYTE 342
RLLDKL G FLE TCVNPTFIIN PEIMSPLAKWHR+K GLTERFEL +NK +L NAYTE
Sbjct: 476 RLLDKLVGEFLEPTCVNPTFIINQPEIMSPLAKWHRSKSGLTERFELFINKHELCNAYTE 535
Query: 343 LNDPVVQRQRFAEQLK 358
LNDPVVQRQRFA+QLK
Sbjct: 536 LNDPVVQRQRFADQLK 551
>SYK_LYCES (Q43776) Lysyl-tRNA synthetase (EC 6.1.1.6) (Lysine--tRNA
ligase) (LysRS)
Length = 588
Score = 452 bits (1164), Expect = e-127
Identities = 217/387 (56%), Positives = 285/387 (73%), Gaps = 31/387 (8%)
Query: 2 SDLDEVEFCKFHSTVERGDTVGVIGFPGKSEEGDLSIFPKTFTVLSHCLHLMPDQKSTAA 61
SD+D V+F + S V+RGD +GV G+PGKS+ G+LSIF K F VL+ CLH++P + +++
Sbjct: 144 SDVDAVQFSNYQSGVKRGDIIGVRGYPGKSKRGELSIFAKPFIVLAPCLHMLPRRLTSSI 203
Query: 62 AAANNANLMES*NIH------------------------------FKGSDIREIFHTRNR 91
+ + ++R +F TR R
Sbjct: 204 VDETRTQNFQGITAYDTWTPGDLRNPESYVLRDQETRYRQRYLDLMMNPEVRALFRTRAR 263
Query: 92 IISYIQRHLDDLDFMEVETPMMNKIAGGAAARPFVTHHNELDLKLFMRIAPELYLKQLVV 151
IISYI+ LD+L+F+EVETP MN AGGA+ARPF+THHNELD +L +R++PELYLK+LVV
Sbjct: 264 IISYIRSFLDNLEFLEVETPSMNLTAGGASARPFITHHNELDTELLIRVSPELYLKKLVV 323
Query: 152 GGMERVYEIGKQFRNEDIDLTHNPEFTTCEFYMAYNEYNDLMEITERMLSGLVQELTNGS 211
GG +RVYE+GK FRNE +DLTH+PEFT CE YMAY +YNDLM++TE++LSG+V++LT GS
Sbjct: 324 GGFDRVYELGKHFRNEGMDLTHSPEFTMCELYMAYADYNDLMDLTEQLLSGMVKDLT-GS 382
Query: 212 YKIKYHANGVDKDPIEIDFTPPFRRIDMIEELESMAGLSIPKDLATDEANQYLKNACLEY 271
YKI+YHANG+D +PIEIDFTPPFR+IDM+ ELE +A +SIP+DL+++ AN++L + C ++
Sbjct: 383 YKIRYHANGLDNEPIEIDFTPPFRKIDMLSELEKVANISIPRDLSSESANKHLVDVCEKF 442
Query: 272 DIKCAPAQTTARLLDKLAGHFLEETCVNPTFIINHPEIMSPLAKWHRTKPGLTERFELIV 331
D+KC P TT RLLDKL GHF+E C+NPTFIINHPEIMSPLAK R++PGLTERF L V
Sbjct: 443 DVKCPPPHTTTRLLDKLVGHFIEVNCINPTFIINHPEIMSPLAKSRRSEPGLTERFNLFV 502
Query: 332 NKLKLSNAYTELNDPVVQRQRFAEQLK 358
N+ +L +AYTELNDP QR+RFAEQLK
Sbjct: 503 NRRELCDAYTELNDPTAQRERFAEQLK 529
>SYK_CRILO (P37879) Lysyl-tRNA synthetase (EC 6.1.1.6) (Lysine--tRNA
ligase) (LysRS)
Length = 597
Score = 410 bits (1055), Expect = e-114
Identities = 207/372 (55%), Positives = 264/372 (70%), Gaps = 39/372 (10%)
Query: 6 EVEFCKFHSTVERGDTVGVIGFPGKSEEGDLSIFPKTFTVLSHCLHLMPDQKSTAAAAAN 65
E EF + ++ + RGD +GV G PGK+++G+LSI P T+LS CLH++P
Sbjct: 166 EEEFVRINNKLRRGDIIGVQGNPGKTKKGELSIIPYEITLLSPCLHMLP----------- 214
Query: 66 NANLMES*NIHFKGSD-----------------IREIFHTRNRIISYIQRHLDDLDFMEV 108
++HF D +R+ F R +II+YI+ LD+L F+E+
Sbjct: 215 --------HLHFGLKDKETRYRQRYLDLILNDFVRQKFIVRAKIITYIRSFLDELGFLEI 266
Query: 109 ETPMMNKIAGGAAARPFVTHHNELDLKLFMRIAPELYLKQLVVGGMERVYEIGKQFRNED 168
ETPMMN I GGA A+PF+T+HNELD+ L+MRIAPELY K LVVGG++RVYEIG+QFRNE
Sbjct: 267 ETPMMNIIPGGAVAKPFITYHNELDMNLYMRIAPELYHKMLVVGGIDRVYEIGRQFRNEG 326
Query: 169 IDLTHNPEFTTCEFYMAYNEYNDLMEITERMLSGLVQELTNGSYKIKYHANGVDKDPIEI 228
IDLTHNPEFTTCEFYMAY +Y+DLMEITE+MLSG+V+ +T GSYKI YH +G + + EI
Sbjct: 327 IDLTHNPEFTTCEFYMAYADYHDLMEITEKMLSGMVKSIT-GSYKITYHPDGPEGEAYEI 385
Query: 229 DFTPPFRRIDMIEELESMAGLSIPKD--LATDEANQYLKNACLEYDIKCAPAQTTARLLD 286
DFTPPFRRI M+EELE G+ +P+ T+E + L + C+ ++C P +TTARLLD
Sbjct: 386 DFTPPFRRISMVEELEKALGVKLPETSLFETEETRKILDDICVAKAVECPPPRTTARLLD 445
Query: 287 KLAGHFLEETCVNPTFIINHPEIMSPLAKWHRTKPGLTERFELIVNKLKLSNAYTELNDP 346
KL G FLE TC+NPTFI +HP+IMSPLAKWHR+K GLTERFEL V K ++ NAYTELNDP
Sbjct: 446 KLVGEFLEVTCINPTFICDHPQIMSPLAKWHRSKEGLTERFELFVMKKEICNAYTELNDP 505
Query: 347 VVQRQRFAEQLK 358
+ QRQ F EQ K
Sbjct: 506 MRQRQLFEEQAK 517
>SYK_MOUSE (Q99MN1) Lysyl-tRNA synthetase (EC 6.1.1.6) (Lysine--tRNA
ligase) (LysRS)
Length = 595
Score = 410 bits (1053), Expect = e-114
Identities = 206/372 (55%), Positives = 264/372 (70%), Gaps = 39/372 (10%)
Query: 6 EVEFCKFHSTVERGDTVGVIGFPGKSEEGDLSIFPKTFTVLSHCLHLMPDQKSTAAAAAN 65
E EF ++ + RGD +GV G PGK+++G+LSI P+ T+LS CLH++P
Sbjct: 164 EEEFVHINNKLRRGDIIGVEGNPGKTKKGELSIIPQEITLLSPCLHMLP----------- 212
Query: 66 NANLMES*NIHFKGSD-----------------IREIFHTRNRIISYIQRHLDDLDFMEV 108
++HF D +R+ F R++II+YI+ LD+L F+E+
Sbjct: 213 --------HLHFGLKDKETRYRQRYLDLILNDFVRQKFIVRSKIITYIRSFLDELGFLEI 264
Query: 109 ETPMMNKIAGGAAARPFVTHHNELDLKLFMRIAPELYLKQLVVGGMERVYEIGKQFRNED 168
ETPMMN I GGA A+PF+T+HNELD+ L+MRIAPELY K LVVGG++RVYEIG+QFRNE
Sbjct: 265 ETPMMNIIPGGAVAKPFITYHNELDMNLYMRIAPELYHKMLVVGGIDRVYEIGRQFRNEG 324
Query: 169 IDLTHNPEFTTCEFYMAYNEYNDLMEITERMLSGLVQELTNGSYKIKYHANGVDKDPIEI 228
IDLTHNPEFTTCEFYMAY +Y+DLMEITE+MLSG+V+ +T GSYKI YH +G + E+
Sbjct: 325 IDLTHNPEFTTCEFYMAYADYHDLMEITEKMLSGMVKSIT-GSYKITYHPDGPEGQAYEV 383
Query: 229 DFTPPFRRIDMIEELESMAGLSIPKD--LATDEANQYLKNACLEYDIKCAPAQTTARLLD 286
DFTPPFRRI M+EELE G+ +P+ T+E + L + C+ ++C P +TTARLLD
Sbjct: 384 DFTPPFRRISMVEELEKALGVKLPETSLFETEETRKILDDICVAKAVECPPPRTTARLLD 443
Query: 287 KLAGHFLEETCVNPTFIINHPEIMSPLAKWHRTKPGLTERFELIVNKLKLSNAYTELNDP 346
KL G FLE TC++PTFI +HP+IMSPLAKWHR+K GLTERFEL V K ++ NAYTELNDP
Sbjct: 444 KLVGEFLEVTCISPTFICDHPQIMSPLAKWHRSKEGLTERFELFVMKKEICNAYTELNDP 503
Query: 347 VVQRQRFAEQLK 358
V QRQ F EQ K
Sbjct: 504 VRQRQLFEEQAK 515
>SYK_HUMAN (Q15046) Lysyl-tRNA synthetase (EC 6.1.1.6) (Lysine--tRNA
ligase) (LysRS)
Length = 597
Score = 407 bits (1046), Expect = e-113
Identities = 203/372 (54%), Positives = 264/372 (70%), Gaps = 39/372 (10%)
Query: 6 EVEFCKFHSTVERGDTVGVIGFPGKSEEGDLSIFPKTFTVLSHCLHLMPDQKSTAAAAAN 65
E EF ++ + RGD +GV G PGK+++G+LSI P T+LS CLH++P
Sbjct: 166 EEEFIHINNKLRRGDIIGVQGNPGKTKKGELSIIPYEITLLSPCLHMLP----------- 214
Query: 66 NANLMES*NIHFKGSD-----------------IREIFHTRNRIISYIQRHLDDLDFMEV 108
++HF D +R+ F R++II+YI+ LD+L F+E+
Sbjct: 215 --------HLHFGLKDKETRYRQRYLDLILNDFVRQKFIIRSKIITYIRSFLDELGFLEI 266
Query: 109 ETPMMNKIAGGAAARPFVTHHNELDLKLFMRIAPELYLKQLVVGGMERVYEIGKQFRNED 168
ETPMMN I GGA A+PF+T+HNELD+ L+MRIAPELY K LVVGG++RVYEIG+QFRNE
Sbjct: 267 ETPMMNIIPGGAVAKPFITYHNELDMNLYMRIAPELYHKMLVVGGIDRVYEIGRQFRNEG 326
Query: 169 IDLTHNPEFTTCEFYMAYNEYNDLMEITERMLSGLVQELTNGSYKIKYHANGVDKDPIEI 228
IDLTHNPEFTTCEFYMAY +Y+DLMEITE+M+SG+V+ +T GSYK+ YH +G + ++
Sbjct: 327 IDLTHNPEFTTCEFYMAYADYHDLMEITEKMVSGMVKHIT-GSYKVTYHPDGPEGQAYDV 385
Query: 229 DFTPPFRRIDMIEELESMAGLSIPKD--LATDEANQYLKNACLEYDIKCAPAQTTARLLD 286
DFTPPFRRI+M+EELE G+ +P+ T+E + L + C+ ++C P +TTARLLD
Sbjct: 386 DFTPPFRRINMVEELEKALGMKLPETNLFETEETRKILDDICVAKAVECPPPRTTARLLD 445
Query: 287 KLAGHFLEETCVNPTFIINHPEIMSPLAKWHRTKPGLTERFELIVNKLKLSNAYTELNDP 346
KL G FLE TC+NPTFI +HP+IMSPLAKWHR+K GLTERFEL V K ++ NAYTELNDP
Sbjct: 446 KLVGEFLEVTCINPTFICDHPQIMSPLAKWHRSKEGLTERFELFVMKKEICNAYTELNDP 505
Query: 347 VVQRQRFAEQLK 358
+ QRQ F EQ K
Sbjct: 506 MRQRQLFEEQAK 517
>SYK_CAEEL (Q22099) Lysyl-tRNA synthetase (EC 6.1.1.6) (Lysine--tRNA
ligase) (LysRS)
Length = 572
Score = 373 bits (957), Expect = e-103
Identities = 178/356 (50%), Positives = 252/356 (70%), Gaps = 6/356 (1%)
Query: 6 EVEFCKFHSTVERGDTVGVIGFPGKSEEGDLSIFPKTFTVLSHCLHLMPDQKSTAAAAAN 65
+V+F H ++RGD VG G +++ G+LS+ P L+ CLH++P S
Sbjct: 145 DVDFVTLHDRIKRGDIVGFTGRATRTKAGELSLIPNEILQLTPCLHMLPH--SHFGLKDK 202
Query: 66 NANLMES*NIHFKGSDIREIFHTRNRIISYIQRHLDDLDFMEVETPMMNKIAGGAAARPF 125
+ +++ F R++II++++R+LD+L F+EVETP+MN+IAGGA A+PF
Sbjct: 203 ELRFRKRYLDLILNPRVKDNFVIRSKIITFLRRYLDNLGFLEVETPIMNQIAGGATAKPF 262
Query: 126 VTHHNELDLKLFMRIAPELYLKQLVVGGMERVYEIGKQFRNEDIDLTHNPEFTTCEFYMA 185
+THHN+LD+ LF+R+APELY K LVVGG++RVYE+G+ FRNE IDLTHNPEFTTCEFYMA
Sbjct: 263 ITHHNDLDMNLFLRVAPELYHKMLVVGGIDRVYEVGRLFRNEGIDLTHNPEFTTCEFYMA 322
Query: 186 YNEYNDLMEITERMLSGLVQELTNGSYKIKYHANGVDKDPI-EIDFTPPFRRIDMIEELE 244
Y +Y D++++TE +LS +V + G+YKI+YH NG + +P+ E+DFTPPF+R+ M + L
Sbjct: 323 YADYEDVIQLTEDLLSSMVMSI-KGTYKIEYHPNGPNTEPVYEVDFTPPFKRVHMYDGLA 381
Query: 245 SMAGLSI--PKDLATDEANQYLKNACLEYDIKCAPAQTTARLLDKLAGHFLEETCVNPTF 302
G ++ P L T+EA + C + ++ C+ +TTARLLDKL G +LE T ++PTF
Sbjct: 382 EKLGATLPDPSTLHTEEAREVFDKLCRDNNVDCSAPRTTARLLDKLVGEYLESTFISPTF 441
Query: 303 IINHPEIMSPLAKWHRTKPGLTERFELIVNKLKLSNAYTELNDPVVQRQRFAEQLK 358
+I HP+IMSPLAKWHR+ PGLTERFEL +++NAYTELNDP+ QRQRF +Q K
Sbjct: 442 LIGHPQIMSPLAKWHRSIPGLTERFELFAVTREIANAYTELNDPITQRQRFEQQAK 497
>SYKC_YEAST (P15180) Lysyl-tRNA synthetase, cytoplasmic (EC 6.1.1.6)
(Lysine--tRNA ligase) (LysRS)
Length = 590
Score = 350 bits (898), Expect = 3e-96
Identities = 185/369 (50%), Positives = 250/369 (67%), Gaps = 26/369 (7%)
Query: 5 DEVEFCKFHSTVERGDTVGVIGFPGKSE-----EGDLSIFPKTFTVLSHCLHLMPDQKST 59
D + K H ++RGD VGV G+ G+++ EG++S+F +L+ CLH++P
Sbjct: 162 DPDSYEKDHDLLKRGDIVGVEGYVGRTQPKKGGEGEVSVFVSRVQLLTPCLHMLP----- 216
Query: 60 AAAAANNANLMES*NIHFK-------GSDIREIFHTRNRIISYIQRHLDDLDFMEVETPM 112
A++ + + K D R F TR+ II YI+R LD F+EVETPM
Sbjct: 217 ----ADHFGFKDQETRYRKRYLDLIMNKDARNRFITRSEIIRYIRRFLDQRKFIEVETPM 272
Query: 113 MNKIAGGAAARPFVTHHNELDLKLFMRIAPELYLKQLVVGGMERVYEIGKQFRNEDIDLT 172
MN IAGGA A+PF+THHN+LD+ ++MRIAPEL+LKQLVVGG++RVYEIG+QFRNE ID+T
Sbjct: 273 MNVIAGGATAKPFITHHNDLDMDMYMRIAPELFLKQLVVGGLDRVYEIGRQFRNEGIDMT 332
Query: 173 HNPEFTTCEFYMAYNEYNDLMEITERMLSGLVQELTNGSYKIKYHANGVD-KDPIEIDFT 231
HNPEFTTCEFY AY + DLM++TE M S +V+E+T GSY IKYH + D +E++F+
Sbjct: 333 HNPEFTTCEFYQAYADVYDLMDMTELMFSEMVKEIT-GSYIIKYHPDPADPAKELELNFS 391
Query: 232 PPFRRIDMIEELESMAGLSIPK--DLATDEANQYLKNACLEYDIKCAPAQTTARLLDKLA 289
P++RI+MIEELE + + P L T E ++LK ++ ++C P T AR+LDKL
Sbjct: 392 RPWKRINMIEELEKVFNVKFPSGDQLHTAETGEFLKKILVDNKLECPPPLTNARMLDKLV 451
Query: 290 GHFLEETCVNPTFIINHPEIMSPLAKWHRTKPGLTERFELIVNKLKLSNAYTELNDPVVQ 349
G LE+TC+NPTFI HP++MSPLAK+ R +PGL ERFE+ V ++ NAYTELNDP Q
Sbjct: 452 GE-LEDTCINPTFIFGHPQMMSPLAKYSRDQPGLCERFEVFVATKEICNAYTELNDPFDQ 510
Query: 350 RQRFAEQLK 358
R RF EQ +
Sbjct: 511 RARFEEQAR 519
>SYK_THEMA (Q9X231) Lysyl-tRNA synthetase (EC 6.1.1.6) (Lysine--tRNA
ligase) (LysRS)
Length = 502
Score = 264 bits (675), Expect = 2e-70
Identities = 153/348 (43%), Positives = 219/348 (61%), Gaps = 19/348 (5%)
Query: 12 FHSTVERGDTVGVIGFPGKSEEGDLSIFPKTFTVLSHCLHLMPDQKSTAAAAANNANLME 71
F V+ GD VGV GFP KS+ G+L+I+ + +T+LS L +P++ + +
Sbjct: 99 FKRHVKIGDFVGVRGFPFKSKTGELTIYVQEYTLLSKALRPLPEKWH---GIKDKEIIYR 155
Query: 72 S*NIHFKGSDIR-EIFHTRNRIISYIQRHLDDLDFMEVETPMMNKIAGGAAARPFVTHHN 130
+ +D E F R + + I+ L+ F+EVETP+++ + GGA ARPFVTH N
Sbjct: 156 QRYLELIVNDEAIERFKKRFKAVRVIREFLNSRGFIEVETPILHYVTGGAEARPFVTHLN 215
Query: 131 ELDLKLFMRIAPELYLKQLVVGGMERVYEIGKQFRNEDIDLTHNPEFTTCEFYMAYNEYN 190
D+ +++RIAPELYLK+L+VGG E++YEIGK FRNE I H+PEFT+ E Y AY +YN
Sbjct: 216 VFDIDMYLRIAPELYLKRLIVGGFEKIYEIGKNFRNEGISYKHSPEFTSIEIYQAYADYN 275
Query: 191 DLMEITERMLSGLVQELTNGSYKIKYHANGVDKDPIEIDFTPPFRRIDMIEELESMAGLS 250
D+M++TE ++ +V+ T G+ KI Y EIDFTPP++R+ M + L+ G+
Sbjct: 276 DMMDLTEELIVEVVKR-TCGTLKISYQGK-------EIDFTPPWKRVRMRDFLKEKLGVD 327
Query: 251 IPKDLATDEANQYLKNACLEYDIKCAPAQTTARLLDKLAGHFLEETCVNPTFIINHPEIM 310
I +D + + L+ +E +IK A L+DKL +EE VNPTFII+HP ++
Sbjct: 328 ILED-PDEVLLKKLEEHGVELEIK-----NRAHLIDKLR-DLVEEELVNPTFIIDHPVVI 380
Query: 311 SPLAKWHRTKPGLTERFELIVNKLKLSNAYTELNDPVVQRQRFAEQLK 358
SPLAK HR P LTERFELI+ +++NA++ELNDPV Q QRF EQ K
Sbjct: 381 SPLAKRHREDPRLTERFELIIFGREIANAFSELNDPVDQYQRFLEQAK 428
>SYK_CLOTE (Q899G7) Lysyl-tRNA synthetase (EC 6.1.1.6) (Lysine--tRNA
ligase) (LysRS)
Length = 502
Score = 263 bits (671), Expect = 7e-70
Identities = 145/366 (39%), Positives = 224/366 (60%), Gaps = 28/366 (7%)
Query: 1 ISDLDEVEFCKFHSTVERGDTVGVIGFPGKSEEGDLSIFPKTFTVLSHCLHLMPDQKSTA 60
I+D+ E E K + + + GD V + G K+ G++SI F +++ L +P++
Sbjct: 96 INDVGE-ERLKEYKSFDIGDFVTITGTVFKTRTGEVSIHITDFKLIAKSLKPLPEKWHG- 153
Query: 61 AAAANNANLMES*NIHFK--------GSDIREIFHTRNRIISYIQRHLDDLDFMEVETPM 112
++ ++ ++ D+R+ F R +II Y++ LD D++EVETP+
Sbjct: 154 ---------LKDPDLRYRQRYVDLIVNEDVRDTFMKRTKIIKYMREFLDAKDYIEVETPV 204
Query: 113 MNKIAGGAAARPFVTHHNELDLKLFMRIAPELYLKQLVVGGMERVYEIGKQFRNEDIDLT 172
++ IAGGAAARPF THHN LD+ +++RIA ELYLK+L+VGG E+VYEIGK FRNE ID+
Sbjct: 205 LSPIAGGAAARPFTTHHNALDIDMYLRIATELYLKRLIVGGFEKVYEIGKNFRNEGIDIR 264
Query: 173 HNPEFTTCEFYMAYNEYNDLMEITERMLSGLVQELTNGSYKIKYHANGVDKDPIEIDFTP 232
HNPEFT E Y AY +YND+MEITE M++ + +++ G+ K+KY + EI+F P
Sbjct: 265 HNPEFTMIELYEAYADYNDMMEITENMVAYIAEKVC-GNTKVKY-------EETEIEFRP 316
Query: 233 PFRRIDMIEELESMAGLSIPKDLATDEANQYLKNACLEYDIKCAPAQTTARLLDKLAGHF 292
P++RI M++ ++ +G+ + +EA + +K E K T A +L+ +
Sbjct: 317 PWKRITMVDSVKEYSGVDFNEIKTDEEARELVKGKDFELKKKLEDC-TKADILNLFFEEY 375
Query: 293 LEETCVNPTFIINHPEIMSPLAKWHRTKPGLTERFELIVNKLKLSNAYTELNDPVVQRQR 352
+E+ + PTF+ ++P +SPL+K P TERFE V +L NAYTELNDP+VQ++R
Sbjct: 376 VEKNLIQPTFVCDYPVEISPLSKKKNDNPEYTERFEGFVYGRELCNAYTELNDPIVQKER 435
Query: 353 FAEQLK 358
F +QLK
Sbjct: 436 FIQQLK 441
>SYK_AQUAE (O67258) Lysyl-tRNA synthetase (EC 6.1.1.6) (Lysine--tRNA
ligase) (LysRS)
Length = 597
Score = 259 bits (661), Expect = 1e-68
Identities = 146/347 (42%), Positives = 213/347 (61%), Gaps = 13/347 (3%)
Query: 12 FHSTVERGDTVGVIGFPGKSEEGDLSIFPKTFTVLSHCLHLMPDQKSTAAAAANNANLME 71
F+ ++ GD VGV G ++ G+L++ + + +L+ LH +P++ +
Sbjct: 198 FNDYIDVGDIVGVRGKLFRTNTGELTVEVEEYQLLAKSLHPLPEKWHGLKDV--EVRYRQ 255
Query: 72 S*NIHFKGSDIREIFHTRNRIISYIQRHLDDLDFMEVETPMMNKIAGGAAARPFVTHHNE 131
+ R IF R ++I+ +++ + F+EVETP++ IA GA ARPFVT+HN
Sbjct: 256 RYLDLIANPEARRIFMLRTKLITEMRKFFEMHGFIEVETPILQPIASGANARPFVTYHNF 315
Query: 132 LDLKLFMRIAPELYLKQLVVGGMERVYEIGKQFRNEDIDLTHNPEFTTCEFYMAYNEYND 191
L+ +L++RIAPELYLK+L+VGG RVYEIGK FRNE +D THNPEFT EFY AY +Y+D
Sbjct: 316 LETELYLRIAPELYLKRLIVGGFPRVYEIGKNFRNESVDRTHNPEFTMVEFYAAYWDYHD 375
Query: 192 LMEITERMLSGLVQELTNGSYKIKYHANGVDKDPIEIDFTPPFRRIDMIEELESMAGLSI 251
L++ TE M L+ E T G+ K+KY E+DF+PPF+++ + L+ G
Sbjct: 376 LIKFTEDMFVYLL-EKTLGTLKVKY-------GEWELDFSPPFKKVRYFDLLKEKTGKD- 426
Query: 252 PKDLATDEANQYLKNACLEYDIKCAPAQTTARLLDKLAGHFLEETCVNPTFIINHPEIMS 311
KD + + L+ E +I T A+LLDK+ EE + PTF+I+ P+I+S
Sbjct: 427 -KDFFLKDL-EGLRKLAKELEIPDVERMTHAKLLDKVFEKVAEEDLIQPTFVIDFPKILS 484
Query: 312 PLAKWHRTKPGLTERFELIVNKLKLSNAYTELNDPVVQRQRFAEQLK 358
PLAK HR P L ERFELI+ + +++NAYTELNDP Q++RF EQLK
Sbjct: 485 PLAKTHREDPDLVERFELIIARYEVANAYTELNDPFDQKERFLEQLK 531
>SYK_BACTN (Q8A5W4) Lysyl-tRNA synthetase (EC 6.1.1.6) (Lysine--tRNA
ligase) (LysRS)
Length = 576
Score = 257 bits (657), Expect = 3e-68
Identities = 142/355 (40%), Positives = 212/355 (59%), Gaps = 23/355 (6%)
Query: 12 FHSTVERGDTVGVIGFPGKSEEGDLSIFPKTFTVLSHCLHLMPDQKSTAAAAANNANLME 71
F ++ GD VG+ GF +++ G++SI K TVL+ + +P K A ++ E
Sbjct: 104 FKRLLDLGDFVGIEGFVFRTQMGEISIHAKKLTVLAKSIKPLPIVKYKDGVAYDS---FE 160
Query: 72 S*NIHFK--------GSDIREIFHTRNRIISYIQRHLDDLDFMEVETPMMNKIAGGAAAR 123
+ ++ I+E F R ++ ++ LD+ + EVETP++ IAGGA+AR
Sbjct: 161 DPELRYRQRYVDLVVNEGIKETFEKRATVVRTLRNALDEAGYTEVETPILQSIAGGASAR 220
Query: 124 PFVTHHNELDLKLFMRIAPELYLKQLVVGGMERVYEIGKQFRNEDIDLTHNPEFTTCEFY 183
PF+THHN LD+ L++RIA ELYLK+L+VGG E VYEIGK FRNE +D THNPEFT E Y
Sbjct: 221 PFITHHNSLDIDLYLRIATELYLKRLIVGGFEGVYEIGKNFRNEGMDRTHNPEFTCMELY 280
Query: 184 MAYNEYNDLMEITERMLSGLVQELTNGSYKIKYHANGVDKDPIEIDFTPPFRRIDMIEEL 243
+ Y +YN +M TE++L + + NGS + D I F P+RR+ +++ +
Sbjct: 281 VQYKDYNWMMSFTEKLLERICIAV-NGSTETVV-------DGKTISFKAPYRRLPILDAI 332
Query: 244 ESMAGLSIPKDLATDEANQYLKNACLEYDIKCAPAQTTARLLDKLAGHFLEETCVNPTFI 303
+ G + + +E Q K +E + +L+D++ G F E + + PTFI
Sbjct: 333 KEKTGYDL-NGKSEEEIRQICKELKME---EIDDTMGKGKLIDEIFGEFCEGSYIQPTFI 388
Query: 304 INHPEIMSPLAKWHRTKPGLTERFELIVNKLKLSNAYTELNDPVVQRQRFAEQLK 358
++P MSPL K HR+KPGLTERFEL+VN +L+NAY+ELNDP+ Q +RF EQ++
Sbjct: 389 TDYPVEMSPLTKMHRSKPGLTERFELMVNGKELANAYSELNDPLDQEERFKEQMR 443
>SYK_BACSU (P37477) Lysyl-tRNA synthetase (EC 6.1.1.6) (Lysine--tRNA
ligase) (LysRS)
Length = 499
Score = 253 bits (646), Expect = 5e-67
Identities = 135/340 (39%), Positives = 208/340 (60%), Gaps = 14/340 (4%)
Query: 19 GDTVGVIGFPGKSEEGDLSIFPKTFTVLSHCLHLMPDQKSTAAAAANNANLMES*NIHFK 78
GD +GV G K+ G+LS+ +F +L+ L +PD+ I
Sbjct: 115 GDLIGVTGKVFKTNVGELSVKATSFELLTKALRPLPDKYHGLKDVEQRYRQRYLDLI--V 172
Query: 79 GSDIREIFHTRNRIISYIQRHLDDLDFMEVETPMMNKIAGGAAARPFVTHHNELDLKLFM 138
D + F TR++II ++R+LDD ++EVETP M+ I GGA+ARPF+THHN LD+ L+M
Sbjct: 173 NPDSKHTFITRSKIIQAMRRYLDDHGYLEVETPTMHSIPGGASARPFITHHNALDIPLYM 232
Query: 139 RIAPELYLKQLVVGGMERVYEIGKQFRNEDIDLTHNPEFTTCEFYMAYNEYNDLMEITER 198
RIA EL+LK+L+VGG+E+VYEIG+ FRNE + HNPEFT E Y AY +Y D+M +TE
Sbjct: 233 RIAIELHLKRLIVGGLEKVYEIGRVFRNEGVSTRHNPEFTMIELYEAYADYKDIMSLTEN 292
Query: 199 MLSGLVQELTNGSYKIKYHANGVDKDPIEIDFTPPFRRIDMIEELESMAGLSIPKDLATD 258
+++ + QE+ G+ I+Y +ID P ++RI M++ ++ G+ +++ +
Sbjct: 293 LVAHIAQEVL-GTTTIQYGEE-------QIDLKPEWKRIHMVDAVKEATGVDFWEEVTVE 344
Query: 259 EANQYLKNACLEYDIKCAPAQTTARLLDKLAGHFLEETCVNPTFIINHPEIMSPLAKWHR 318
+A +Y K E++++ + T ++++ +EET + PTFI HP +SPLAK +
Sbjct: 345 QAREYAK----EHEVEIKDSMTVGHIINEFFEQKIEETLIQPTFIYGHPVEISPLAKKNP 400
Query: 319 TKPGLTERFELIVNKLKLSNAYTELNDPVVQRQRFAEQLK 358
P T+RFEL + + +NA+TELNDP+ QR+RF QLK
Sbjct: 401 EDPRFTDRFELFIVGREHANAFTELNDPIDQRERFEAQLK 440
>SYK_BACHD (Q9KGG4) Lysyl-tRNA synthetase (EC 6.1.1.6) (Lysine--tRNA
ligase) (LysRS)
Length = 501
Score = 253 bits (645), Expect = 7e-67
Identities = 134/344 (38%), Positives = 212/344 (60%), Gaps = 14/344 (4%)
Query: 14 STVERGDTVGVIGFPGKSEEGDLSIFPKTFTVLSHCLHLMPDQKSTAAAAANNANLMES* 73
++++ GD VGV G K++ G+LS+ + F +L+ L +PD+
Sbjct: 106 TSIDIGDIVGVKGVAFKTKVGELSVKVQDFQLLTKSLRPLPDKYHGLKDVEQRYRQRYLD 165
Query: 74 NIHFKGSDIREIFHTRNRIISYIQRHLDDLDFMEVETPMMNKIAGGAAARPFVTHHNELD 133
I ++R+ F R++I+ ++R+LDD ++EVETP M+ I GGA+ARPFVTHHN LD
Sbjct: 166 LI--VNPEVRDTFVLRSKILQSMRRYLDDRGYLEVETPTMHSIPGGASARPFVTHHNALD 223
Query: 134 LKLFMRIAPELYLKQLVVGGMERVYEIGKQFRNEDIDLTHNPEFTTCEFYMAYNEYNDLM 193
+ L+MRIA EL+LK+L+VGGME+VYEIG+ FRNE + HNPEFT E Y AY +YND+M
Sbjct: 224 MTLYMRIAIELHLKRLIVGGMEKVYEIGRVFRNEGVSTRHNPEFTMIELYEAYADYNDIM 283
Query: 194 EITERMLSGLVQELTNGSYKIKYHANGVDKDPIEIDFTPPFRRIDMIEELESMAGLSIPK 253
E+TE +++ + +++ G+ I Y + E++ P +RR+ M+E ++ G+
Sbjct: 284 ELTELLIAHIAKDVL-GTTTITYGEH-------EVNLEPKWRRVHMVEAIKEETGVDFWN 335
Query: 254 DLATDEANQYLKNACLEYDIKCAPAQTTARLLDKLAGHFLEETCVNPTFIINHPEIMSPL 313
+++ +EA K E+++ T ++++ HF+EE + PTF+ HP +SPL
Sbjct: 336 EMSDEEARALAK----EHNVPVKETMTYGHVVNEFFEHFVEEKLIQPTFVYGHPVAISPL 391
Query: 314 AKWHRTKPGLTERFELIVNKLKLSNAYTELNDPVVQRQRFAEQL 357
AK + P T+RFEL + + +NA++ELNDP+ QR RF +QL
Sbjct: 392 AKKNPDDPRFTDRFELFIVGREHANAFSELNDPIDQRHRFEQQL 435
>SYK_LEPIN (Q8F4P5) Lysyl-tRNA synthetase (EC 6.1.1.6) (Lysine--tRNA
ligase) (LysRS)
Length = 495
Score = 252 bits (644), Expect = 9e-67
Identities = 138/361 (38%), Positives = 225/361 (62%), Gaps = 18/361 (4%)
Query: 3 DLDEVEFCKFHSTVERGDTVGVIGFPGKSEEGDLSIFPKTFTVLSHCLHLMPDQKSTAAA 62
DL E ++ F S ++ GD +G+ G+ K+++G++++ + +L+ C+ +P K
Sbjct: 89 DLGETQYSIFKS-LDLGDIIGLEGYLFKTQKGEITLHVTSVELLAKCIRPLPVVKEKDGV 147
Query: 63 AANN-ANLMES*NIHFK----GSDIREIFHTRNRIISYIQRHLDDLDFMEVETPMMNKIA 117
+ A++ + + + +R+ F TR++I+S I+ L F+EVETPMM IA
Sbjct: 148 VYDAFADVEQRYRMRYVDLIVNDHVRDTFITRSKIVSEIRSFLTQEGFLEVETPMMQPIA 207
Query: 118 GGAAARPFVTHHNELDLKLFMRIAPELYLKQLVVGGMERVYEIGKQFRNEDIDLTHNPEF 177
GGAAARPFVTHHN LD++LF+RIAPELYLK+L+VGGM+RV+E+ + FRNE I HNPEF
Sbjct: 208 GGAAARPFVTHHNTLDMQLFLRIAPELYLKRLIVGGMDRVFELNRNFRNEGISTKHNPEF 267
Query: 178 TTCEFYMAYNEYNDLMEITERMLSGLVQELTNGSYKIKYHANGVDKDPIEIDFTPPFRRI 237
T E YMA+ + + ++++TER+++ L Q++ G+ KI+Y G D ID +PP++R
Sbjct: 268 TMMEAYMAFGDMSTMLDLTERLITHLAQKIC-GTLKIQY---GKDL----IDLSPPWKRT 319
Query: 238 DMIEELESMAGLSIPKDLATDEANQYLKNACLEYDIKCAPAQTTARLLDKLAGHFLEETC 297
++ ++ +G+ + ++ +EA K E + + QT ++ D++ E
Sbjct: 320 TYVDIIKEYSGIDFSQIISLEEA----KKKASELKVDVSKCQTIWKVADEVFSEKAEPNL 375
Query: 298 VNPTFIINHPEIMSPLAKWHRTKPGLTERFELIVNKLKLSNAYTELNDPVVQRQRFAEQL 357
+ P FI ++P+ +SPLAK + KPG ERFE V ++ NA+TELNDP Q++RF +Q+
Sbjct: 376 IQPIFITDYPKELSPLAKSNPDKPGYVERFEPYVAGREIGNAFTELNDPFDQKERFEDQV 435
Query: 358 K 358
K
Sbjct: 436 K 436
>SYK_THETN (Q8R7N1) Lysyl-tRNA synthetase (EC 6.1.1.6) (Lysine--tRNA
ligase) (LysRS)
Length = 499
Score = 252 bits (643), Expect = 1e-66
Identities = 135/348 (38%), Positives = 211/348 (59%), Gaps = 29/348 (8%)
Query: 19 GDTVGVIGFPGKSEEGDLSIFPKTFTVLSHCLHLMPDQKSTAAAAANNANLMES*NIHFK 78
GD +GV G K++ G+++I K F +L L ++P++ ++ ++ ++
Sbjct: 113 GDIIGVTGEVFKTKTGEITINVKDFKLLCKSLQVLPEKWHG----------LKDPDLRYR 162
Query: 79 --------GSDIREIFHTRNRIISYIQRHLDDLDFMEVETPMMNKIAGGAAARPFVTHHN 130
+RE+F R +II I+ LD+ F+EVETP+++ IAGGAAARPF+THHN
Sbjct: 163 QRYVDLIINPSVREVFLKRTKIIKAIREFLDNRGFLEVETPVLHTIAGGAAARPFITHHN 222
Query: 131 ELDLKLFMRIAPELYLKQLVVGGMERVYEIGKQFRNEDIDLTHNPEFTTCEFYMAYNEYN 190
LD+ +++RIA EL+LK+L+VGG E+VYEIG+ FRNE +D+ HNPEFT E Y AY +Y+
Sbjct: 223 ALDIDMYLRIALELHLKRLIVGGFEKVYEIGRVFRNEGMDIRHNPEFTLLELYEAYTDYH 282
Query: 191 DLMEITERMLSGLVQELTNGSYKIKYHANGVDKDPIEIDFTPPFRRIDMIEELESMAGLS 250
+ME+TE++ + V E NGS KI Y EID TPP++RI M++ ++ G+
Sbjct: 283 GMMELTEQLFA-YVAEKVNGSTKIIYQGT-------EIDLTPPWKRITMVDAIKEYVGID 334
Query: 251 IPKDLATDEANQYLKNACLEYDIKCAPAQTTARLLDKLAGHFLEETCVNPTFIINHPEIM 310
K +EA + K+ LE P ++ + +E+ + PTF++++P +
Sbjct: 335 FEKVATDEEARKIAKDLNLELK---KPDMKKGEVIALVFDELVEKHLIQPTFVMDYPVEV 391
Query: 311 SPLAKWHRTKPGLTERFELIVNKLKLSNAYTELNDPVVQRQRFAEQLK 358
SPLAK R P T RFE + +++NA++ELNDP+ Q++RF EQL+
Sbjct: 392 SPLAKRKRDNPAFTSRFEAFIYGREVANAFSELNDPIDQKERFLEQLR 439
>SYK_CLOPE (Q8XHL8) Lysyl-tRNA synthetase (EC 6.1.1.6) (Lysine--tRNA
ligase) (LysRS)
Length = 501
Score = 251 bits (640), Expect = 3e-66
Identities = 141/351 (40%), Positives = 209/351 (59%), Gaps = 11/351 (3%)
Query: 8 EFCKFHSTVERGDTVGVIGFPGKSEEGDLSIFPKTFTVLSHCLHLMPDQKSTAAAAANNA 67
E K T + GD V G K++ G++S+ +F ++ L +P++
Sbjct: 102 EALKEFKTFDLGDWVAATGEVFKTKMGEVSVKVTSFELICKSLKPLPEKWHGLKDPDLRY 161
Query: 68 NLMES*NIHFKGSDIREIFHTRNRIISYIQRHLDDLDFMEVETPMMNKIAGGAAARPFVT 127
E I ++++ F R++I+ I+ LD+ F+EV+TP+++ IAGGAAARPF+T
Sbjct: 162 RQREVDII--TNPEVKDTFIKRSQIVKAIREFLDNRGFLEVDTPILSPIAGGAAARPFIT 219
Query: 128 HHNELDLKLFMRIAPELYLKQLVVGGMERVYEIGKQFRNEDIDLTHNPEFTTCEFYMAYN 187
HHN LD+ +++RIA ELYLK+L+V G E+VYE+GK FRNE + + HNPEFT E Y AY
Sbjct: 220 HHNALDIDMYLRIATELYLKRLIVAGFEKVYEMGKNFRNEGVSVRHNPEFTAIELYEAYA 279
Query: 188 EYNDLMEITERMLSGLVQELTNGSYKIKYHANGVDKDPIEIDFTPPFRRIDMIEELESMA 247
+YND+MEI E M++ V E NGS K+ Y EIDFTPP+RRI M++ ++ A
Sbjct: 280 DYNDMMEIMENMIA-YVCEKVNGSTKVTYEGT-------EIDFTPPWRRITMVDAVKEFA 331
Query: 248 GLSIPKDLATDEANQYLKNACLEYDIKCAPAQTTARLLDKLAGHFLEETCVNPTFIINHP 307
G+ + + +EA K LE+ K T +L+ L + E+ + PTF+I++P
Sbjct: 332 GIDFNEIKSDEEAQAIAKEKNLEFP-KPLDKVTKGEVLNMLFEEYGEDKLIQPTFLIDYP 390
Query: 308 EIMSPLAKWHRTKPGLTERFELIVNKLKLSNAYTELNDPVVQRQRFAEQLK 358
+SPL K R TERFE V ++ NAY+ELNDP+VQR+RF +Q +
Sbjct: 391 VEISPLTKKKRGNEMFTERFEGFVYGREVCNAYSELNDPIVQRERFEQQAR 441
>SYK_BACST (Q9RHV9) Lysyl-tRNA synthetase (EC 6.1.1.6) (Lysine--tRNA
ligase) (LysRS)
Length = 494
Score = 250 bits (638), Expect = 4e-66
Identities = 137/340 (40%), Positives = 210/340 (61%), Gaps = 14/340 (4%)
Query: 19 GDTVGVIGFPGKSEEGDLSIFPKTFTVLSHCLHLMPDQKSTAAAAANNANLMES*NIHFK 78
GD VGV G K++ G+LSI ++ L+ L +P++ I
Sbjct: 110 GDIVGVRGTMFKTKVGELSIKVSSYEFLTKALRPLPEKYHGLKDIEQRYRQRYLDLI--M 167
Query: 79 GSDIREIFHTRNRIISYIQRHLDDLDFMEVETPMMNKIAGGAAARPFVTHHNELDLKLFM 138
+ ++ F TR+ II ++R+LD ++EVETPMM+ +AGGAAARPF+THHN LD+ L+M
Sbjct: 168 NPESKKTFITRSLIIQSMRRYLDSHGYLEVETPMMHAVAGGAAARPFITHHNALDMTLYM 227
Query: 139 RIAPELYLKQLVVGGMERVYEIGKQFRNEDIDLTHNPEFTTCEFYMAYNEYNDLMEITER 198
RIA EL+LK+L+VGG+E+VYEIG+ FRNE I HNPEFT E Y AY ++ D+M++TE
Sbjct: 228 RIAIELHLKRLIVGGLEKVYEIGRVFRNEGISTRHNPEFTMLELYEAYADFRDIMKLTEN 287
Query: 199 MLSGLVQELTNGSYKIKYHANGVDKDPIEIDFTPPFRRIDMIEELESMAGLSIPKDLATD 258
+++ + E+ G+ KI+Y + +D TP +RR+ M++ ++ G+ + ++ +
Sbjct: 288 LIAHIATEVL-GTTKIQYGEH-------LVDLTPEWRRLHMVDAIKEYVGVDFWRQMSDE 339
Query: 259 EANQYLKNACLEYDIKCAPAQTTARLLDKLAGHFLEETCVNPTFIINHPEIMSPLAKWHR 318
EA + K E+ ++ AP T ++++ +E+ + PTFI HP +SPLAK +
Sbjct: 340 EARELAK----EHGVEVAPHMTFGHIVNEFFEQKVEDKLIQPTFIYGHPVEISPLAKKNP 395
Query: 319 TKPGLTERFELIVNKLKLSNAYTELNDPVVQRQRFAEQLK 358
P T+RFEL + + +NA+TELNDP+ QRQRF EQLK
Sbjct: 396 DDPRFTDRFELFIVGREHANAFTELNDPIDQRQRFEEQLK 435
>SYK2_METAC (Q8TSN5) Lysyl-tRNA synthetase 2 (EC 6.1.1.6)
(Lysine--tRNA ligase 2) (LysRS 2)
Length = 511
Score = 249 bits (636), Expect = 8e-66
Identities = 149/356 (41%), Positives = 209/356 (57%), Gaps = 14/356 (3%)
Query: 3 DLDEVEFCKFHSTVERGDTVGVIGFPGKSEEGDLSIFPKTFTVLSHCLHLMPDQKSTAAA 62
+L + EF F + ++ GD +G+ G +++ G+ SI F++LS L +P++
Sbjct: 110 NLPDEEFATFKNLMDSGDIIGIQGELFRTKRGENSISVSEFSLLSKSLCALPEKFHGLKD 169
Query: 63 AANNANLMES*NIHFKGSDIREIFHTRNRIISYIQRHLDDLDFMEVETPMMNKIAGGAAA 122
I ++ REIF R+++IS I+R L D +F+E ETP++ + GGA A
Sbjct: 170 VETRYRKRYLDLI--VNAEKREIFVMRSKLISEIRRFLADREFLEFETPILQTVYGGANA 227
Query: 123 RPFVTHHNELDLKLFMRIAPELYLKQLVVGGMERVYEIGKQFRNEDIDLTHNPEFTTCEF 182
RPF T HN L LF+RIAPELYLK+LVVGG E+V+EI K FRNEDID THNPEFT E
Sbjct: 228 RPFKTFHNCLGQNLFLRIAPELYLKRLVVGGYEKVFEISKNFRNEDIDTTHNPEFTMIEV 287
Query: 183 YMAYNEYNDLMEITERMLSGLVQELTNGSYKIKYHANGVDKDPIEIDFTPPFRRIDMIEE 242
Y AY +YND+M++TE ++S LV LT G Y++K N I+ P++RI M
Sbjct: 288 YEAYRDYNDMMDLTEALISELVFRLT-GGYEVKMGEN-------TINLRSPWKRISMEGA 339
Query: 243 LESMAGLSIPKDLATDEANQYLKNACLEYDIKCAPAQTTARLLDKLAGHFLEETCVNPTF 302
L+ AGL + + ++N +Y+ A++ L L +E+ VNPTF
Sbjct: 340 LKEYAGLDVFSHSLEELKQIAIQNRIEDYE----KAKSHGEFLALLFEGLVEDKLVNPTF 395
Query: 303 IINHPEIMSPLAKWHRTKPGLTERFELIVNKLKLSNAYTELNDPVVQRQRFAEQLK 358
I + P SPLAK HR K G ERFEL +N +L+N Y+ELNDP+ Q +RF EQ K
Sbjct: 396 IYDFPVENSPLAKNHREKEGFVERFELFLNGWELANGYSELNDPLEQEKRFEEQDK 451
>SYK_PORGI (Q7MUV7) Lysyl-tRNA synthetase (EC 6.1.1.6) (Lysine--tRNA
ligase) (LysRS)
Length = 578
Score = 248 bits (634), Expect = 1e-65
Identities = 138/358 (38%), Positives = 212/358 (58%), Gaps = 23/358 (6%)
Query: 11 KFHSTVER-----GDTVGVIGFPGKSEEGDLSIFPKTFTVLSHCLHLMPDQKSTAAAAAN 65
+F++TV + GD +GV G+ +++ G++S+ + T LS + +P K +
Sbjct: 100 EFYNTVVKKCTDIGDFIGVKGYVFRTQMGEISVHVQEMTFLSKAIRPLPVVKEKDGEVFD 159
Query: 66 NANLMES*NIH-----FKGSDIREIFHTRNRIISYIQRHLDDLDFMEVETPMMNKIAGGA 120
E S +++IF R + + ++ ++ ++EV+TP++ I GGA
Sbjct: 160 GFTDPEQRYRQRYVDLVVNSHVKDIFLKRTMVFNSMRSFFNECGYIEVDTPVLQSIPGGA 219
Query: 121 AARPFVTHHNELDLKLFMRIAPELYLKQLVVGGMERVYEIGKQFRNEDIDLTHNPEFTTC 180
AARPF+THHN LD+ L++RIA ELYLK+L+VGG + VYE + FRNE +D THNPEFT
Sbjct: 220 AARPFITHHNALDIPLYLRIANELYLKRLIVGGFDGVYEFSRNFRNEGMDRTHNPEFTAM 279
Query: 181 EFYMAYNEYNDLMEITERMLSGLVQELTNGSYKIKYHANGVDKDPIEIDFTPPFRRIDMI 240
E Y+AY +YN +M TE+ML + ++ G+ ++K IDF P++R+ MI
Sbjct: 280 EIYVAYKDYNWMMNFTEQMLERICMDVL-GTTQMKVGGK-------LIDFKAPYKRVTMI 331
Query: 241 EELESMAGLSIPKDLATDEANQYLKNACLEYDIKCAPAQTTARLLDKLAGHFLEETCVNP 300
E + G+ I +EA L+ C + ++ +L+D++ G E+ + P
Sbjct: 332 EAIHEHTGIDIS---GMNEAE--LRQVCDKLGVEHNETMGKGKLIDEIFGEKCEKNYIQP 386
Query: 301 TFIINHPEIMSPLAKWHRTKPGLTERFELIVNKLKLSNAYTELNDPVVQRQRFAEQLK 358
TFI ++P+ MSPL K HRT P LTERFEL+VN +L+NAY+ELNDP+ QR+RF EQLK
Sbjct: 387 TFITDYPKEMSPLTKEHRTNPELTERFELMVNGKELANAYSELNDPIDQRERFEEQLK 444
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.322 0.138 0.407
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,068,621
Number of Sequences: 164201
Number of extensions: 1830122
Number of successful extensions: 4747
Number of sequences better than 10.0: 312
Number of HSP's better than 10.0 without gapping: 261
Number of HSP's successfully gapped in prelim test: 51
Number of HSP's that attempted gapping in prelim test: 4011
Number of HSP's gapped (non-prelim): 359
length of query: 358
length of database: 59,974,054
effective HSP length: 111
effective length of query: 247
effective length of database: 41,747,743
effective search space: 10311692521
effective search space used: 10311692521
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 66 (30.0 bits)
Medicago: description of AC125477.1