BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC125368.9 + phase: 0
(216 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ARA3_ARATH (P28186) Ras-related protein ARA-3 408 e-114
RAB1_BETVU (Q39433) Ras-related protein RAB1BV 385 e-107
SAS1_DICDI (P20790) GTP-binding protein SAS1 301 1e-81
SAS2_DICDI (P20791) GTP-binding protein SAS2 293 2e-79
YPT2_VOLCA (P36861) GTP-binding protein yptV2 278 5e-75
YPT2_SCHPO (P17609) Ras-related protein ypt2 (SEC4 homolog) 271 6e-73
RB8A_HUMAN (P61006) Ras-related protein Rab-8A (Oncogene c-mel) 259 3e-69
RB8A_CANFA (P61007) Ras-related protein Rab-8A (Oncogene c-mel) 259 3e-69
RB8B_RAT (P70550) Ras-related protein Rab-8B 258 7e-69
RB8B_MOUSE (P61028) Ras-related protein Rab-8B 258 7e-69
RB8B_HUMAN (Q92930) Ras-related protein Rab-8B 258 1e-68
RB8A_MOUSE (P55258) Ras-related protein Rab-8A (Oncogene c-mel) 257 2e-68
RAB8_DISOM (P22128) Ras-related protein Rab-8 (ORA2) 254 1e-67
RYL1_YARLI (P41924) Ras-like GTP-binding protein RYL1 252 5e-67
ARA5_ARATH (P28188) Ras-related protein ARA-5 251 7e-67
RB10_MOUSE (P61027) Ras-related protein Rab-10 248 6e-66
RB10_HUMAN (P61026) Ras-related protein Rab-10 248 6e-66
RB10_CANFA (P24409) Ras-related protein Rab-10 248 6e-66
RIC1_ORYSA (P40392) Ras-related protein RIC1 246 2e-65
YPT2_MAIZE (Q05737) GTP-binding protein YPTM2 244 1e-64
>ARA3_ARATH (P28186) Ras-related protein ARA-3
Length = 216
Score = 408 bits (1048), Expect = e-114
Identities = 204/216 (94%), Positives = 210/216 (96%)
Query: 1 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD
Sbjct: 1 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
Query: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN
Sbjct: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
Query: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 180
VNKILVGNKADMDESKRAVPT+KGQALADEYGIKFFETSAKTNLNVEEVFFSI RDIKQR
Sbjct: 121 VNKILVGNKADMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVEEVFFSIGRDIKQR 180
Query: 181 LADTDSKSEPQTIKINQPDQGAGAAQAAQKSACCGS 216
L+DTDS++EP TIKI+Q DQ AGA QA QKSACCG+
Sbjct: 181 LSDTDSRAEPATIKISQTDQAAGAGQATQKSACCGT 216
>RAB1_BETVU (Q39433) Ras-related protein RAB1BV
Length = 215
Score = 385 bits (990), Expect = e-107
Identities = 199/217 (91%), Positives = 204/217 (93%), Gaps = 3/217 (1%)
Query: 1 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD
Sbjct: 1 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
Query: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN
Sbjct: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
Query: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 180
VNKILVGNKADMDESKRAVPT+KGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR
Sbjct: 121 VNKILVGNKADMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 180
Query: 181 LADTDSKSEPQ-TIKINQPDQGAGAAQAAQKSACCGS 216
LAD+D++ E Q +I I DQ QAA KSACCGS
Sbjct: 181 LADSDTRQEAQPSITIKPADQSGN--QAAAKSACCGS 215
>SAS1_DICDI (P20790) GTP-binding protein SAS1
Length = 208
Score = 301 bits (770), Expect = 1e-81
Identities = 155/214 (72%), Positives = 178/214 (82%), Gaps = 6/214 (2%)
Query: 1 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
M +P A YDYLIKLLLIGDSGVGKSCLLLRFS+ SFT SFITTIGIDFKIRTIEL+
Sbjct: 1 MTSPATNKSAAYDYLIKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELE 60
Query: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDE SF NIRNWIRNIEQHA+D+
Sbjct: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFGNIRNWIRNIEQHATDS 120
Query: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 180
VNK+L+GNK DM E K+ V +S+G++LADEYGIKF ETSAK ++NVEE F S+A+DIK+R
Sbjct: 121 VNKMLIGNKCDMAE-KKVVDSSRGKSLADEYGIKFLETSAKNSINVEEAFISLAKDIKKR 179
Query: 181 LADTDSKSEPQTIKINQPDQGAGAAQAAQKSACC 214
+ DT ++ +PQ + QP G A +K ACC
Sbjct: 180 MIDTPNE-QPQVV---QPGTNLG-ANNNKKKACC 208
>SAS2_DICDI (P20791) GTP-binding protein SAS2
Length = 203
Score = 293 bits (751), Expect = 2e-79
Identities = 149/214 (69%), Positives = 170/214 (78%), Gaps = 11/214 (5%)
Query: 1 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
M +P A YD+L+KLLLIGDSGVGKSCLLLRFSDGSFT SFI TIGIDFKIRTIEL+
Sbjct: 1 MTSPATNKPAAYDFLVKLLLIGDSGVGKSCLLLRFSDGSFTPSFIATIGIDFKIRTIELE 60
Query: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDE SF +IRNWIRNIEQHASD+
Sbjct: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFGSIRNWIRNIEQHASDS 120
Query: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 180
VNK+L+GNK DM E K+ V +S+G++LADEYGIKF ETSAK ++NVEE F +A+DIK+R
Sbjct: 121 VNKMLIGNKCDMTE-KKVVDSSRGKSLADEYGIKFLETSAKNSVNVEEAFIGLAKDIKKR 179
Query: 181 LADTDSKSEPQTIKINQPDQGAGAAQAAQKSACC 214
+ DT N PD +K+ CC
Sbjct: 180 MIDTP----------NDPDHTICITPNNKKNTCC 203
>YPT2_VOLCA (P36861) GTP-binding protein yptV2
Length = 217
Score = 278 bits (712), Expect = 5e-75
Identities = 135/210 (64%), Positives = 169/210 (80%), Gaps = 4/210 (1%)
Query: 9 RADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQI 68
R DYD LIKLLL+GDSGVGKSCLLLRF+D FT+SFITTIGIDFKI+ +++DGK +KLQI
Sbjct: 7 RPDYDALIKLLLVGDSGVGKSCLLLRFTDDMFTSSFITTIGIDFKIKKVDVDGKLVKLQI 66
Query: 69 WDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGN 128
WDTAGQERFRTIT+AYYRGA GI+LVYD+TDE+SFNN+RNW+RNIEQHASDNVNKILVGN
Sbjct: 67 WDTAGQERFRTITSAYYRGAQGIILVYDITDEASFNNVRNWMRNIEQHASDNVNKILVGN 126
Query: 129 KADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSKS 188
K D+ E KR V ++GQALADE+G +F+ETSAK N++VEE F ++A+D+ R+ +
Sbjct: 127 KLDLAEDKRVVSIARGQALADEFGFRFYETSAKDNVHVEEAFIAVAKDVLARMEGEHANQ 186
Query: 189 ---EPQTIKINQPDQ-GAGAAQAAQKSACC 214
+ Q + QP + +G+ AQ +CC
Sbjct: 187 QLLQQQQLSAAQPVRLTSGSPSPAQGKSCC 216
>YPT2_SCHPO (P17609) Ras-related protein ypt2 (SEC4 homolog)
Length = 200
Score = 271 bits (694), Expect = 6e-73
Identities = 134/185 (72%), Positives = 157/185 (84%), Gaps = 1/185 (0%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYLIKLLLIGDSGVGKSCLLLRFS+ SFT SFITTIGIDFKIRTIELDGKRIKLQIWDT
Sbjct: 6 YDYLIKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRIKLQIWDT 65
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGILL+YDVTD+ SF+N+R W N+EQHAS+NV KIL+GNK D
Sbjct: 66 AGQERFRTITTAYYRGAMGILLLYDVTDKKSFDNVRTWFSNVEQHASENVYKILIGNKCD 125
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSKSEPQ 191
E +R V +GQALADE G+KF E SAKTN+NV+E FF++AR+IK++ D +++ Q
Sbjct: 126 C-EDQRQVSFEQGQALADELGVKFLEASAKTNVNVDEAFFTLAREIKKQKIDAENEFSNQ 184
Query: 192 TIKIN 196
++
Sbjct: 185 ANNVD 189
>RB8A_HUMAN (P61006) Ras-related protein Rab-8A (Oncogene c-mel)
Length = 207
Score = 259 bits (662), Expect = 3e-69
Identities = 130/193 (67%), Positives = 159/193 (82%), Gaps = 6/193 (3%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+C+L RFS+ +F ++FI+TIGIDFKIRTIELDGKRIKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+T+E SF+NIRNWIRNIE+HAS +V K+++GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIK----QRLADTDSK 187
+++ KR V +G+ LA +YGIKF ETSAK N+NVE FF++ARDIK ++L +
Sbjct: 125 VND-KRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGNSPQ 183
Query: 188 SEPQTIKINQPDQ 200
Q +KI PDQ
Sbjct: 184 GSNQGVKIT-PDQ 195
>RB8A_CANFA (P61007) Ras-related protein Rab-8A (Oncogene c-mel)
Length = 207
Score = 259 bits (662), Expect = 3e-69
Identities = 130/193 (67%), Positives = 159/193 (82%), Gaps = 6/193 (3%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+C+L RFS+ +F ++FI+TIGIDFKIRTIELDGKRIKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+T+E SF+NIRNWIRNIE+HAS +V K+++GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIK----QRLADTDSK 187
+++ KR V +G+ LA +YGIKF ETSAK N+NVE FF++ARDIK ++L +
Sbjct: 125 VND-KRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGNSPQ 183
Query: 188 SEPQTIKINQPDQ 200
Q +KI PDQ
Sbjct: 184 GSNQGVKIT-PDQ 195
>RB8B_RAT (P70550) Ras-related protein Rab-8B
Length = 207
Score = 258 bits (659), Expect = 7e-69
Identities = 126/190 (66%), Positives = 159/190 (83%), Gaps = 5/190 (2%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+CLL RFS+ +F T+FI+TIGIDFKIRTIELDGK+IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+T+E SF+NI+NWIRNIE+HAS +V ++++GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDI----KQRLADTDSK 187
M++ KR V +G+ LA +YGIKF ETSAK++ NVEE FF++ARDI +++ D++S
Sbjct: 125 MND-KRQVSKERGEKLAIDYGIKFLETSAKSSTNVEEAFFTLARDIMTKLNRKMNDSNSS 183
Query: 188 SEPQTIKINQ 197
+KI +
Sbjct: 184 GAGGPVKITE 193
>RB8B_MOUSE (P61028) Ras-related protein Rab-8B
Length = 207
Score = 258 bits (659), Expect = 7e-69
Identities = 126/190 (66%), Positives = 159/190 (83%), Gaps = 5/190 (2%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+CLL RFS+ +F T+FI+TIGIDFKIRTIELDGK+IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+T+E SF+NI+NWIRNIE+HAS +V ++++GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDI----KQRLADTDSK 187
M++ KR V +G+ LA +YGIKF ETSAK++ NVEE FF++ARDI +++ D++S
Sbjct: 125 MND-KRQVSKERGEKLAIDYGIKFLETSAKSSTNVEEAFFTLARDIMTKLNRKMNDSNSS 183
Query: 188 SEPQTIKINQ 197
+KI +
Sbjct: 184 GAGGPVKITE 193
>RB8B_HUMAN (Q92930) Ras-related protein Rab-8B
Length = 207
Score = 258 bits (658), Expect = 1e-68
Identities = 126/190 (66%), Positives = 159/190 (83%), Gaps = 5/190 (2%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+CLL RFS+ +F T+FI+TIGIDFKIRTIELDGK+IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+T+E SF+NI+NWIRNIE+HAS +V ++++GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDI----KQRLADTDSK 187
M++ KR V +G+ LA +YGIKF ETSAK++ NVEE FF++ARDI +++ D++S
Sbjct: 125 MND-KRQVSKERGEKLAIDYGIKFLETSAKSSANVEEAFFTLARDIMTKLNRKMNDSNSA 183
Query: 188 SEPQTIKINQ 197
+KI +
Sbjct: 184 GAGGPVKITE 193
>RB8A_MOUSE (P55258) Ras-related protein Rab-8A (Oncogene c-mel)
Length = 206
Score = 257 bits (656), Expect = 2e-68
Identities = 123/170 (72%), Positives = 150/170 (87%), Gaps = 1/170 (0%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+C+L RFS+ +F ++FI+TIGIDFKIRTIELDGKRIKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+T+E SF+NIRNWIRNIE+HAS +V K+++GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRL 181
+++ KR V +G+ LA +YGIKF ETSAK N+NVE FF++ARDIK ++
Sbjct: 125 VND-KRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKM 173
>RAB8_DISOM (P22128) Ras-related protein Rab-8 (ORA2)
Length = 210
Score = 254 bits (648), Expect = 1e-67
Identities = 121/170 (71%), Positives = 149/170 (87%), Gaps = 1/170 (0%)
Query: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YDYL KLLLIGDSGVGK+CLL RFS+ +F T+FI+TIGIDFKIRT+ELDGK+IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTVELDGKKIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
AGQERFRTITTAYYRGAMGI+ VYD+T+E SF+NI+NWIRNIE+HAS +V ++++GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIMKVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRL 181
M+E KR V +G+ LA +YGIKF ETSAK+++NVEE F ++ARDI +L
Sbjct: 125 MNE-KRQVSKERGEKLAIDYGIKFLETSAKSSINVEEAFITLARDIMTKL 173
>RYL1_YARLI (P41924) Ras-like GTP-binding protein RYL1
Length = 203
Score = 252 bits (643), Expect = 5e-67
Identities = 123/179 (68%), Positives = 148/179 (81%), Gaps = 1/179 (0%)
Query: 6 ARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIK 65
+ ++ YD LIKLLLIGDSGVGKSCLLLRF + FT SFITTIGIDFKIRTI++ +R+K
Sbjct: 2 SHSQRTYDLLIKLLLIGDSGVGKSCLLLRFCEDQFTPSFITTIGIDFKIRTIDIGNQRVK 61
Query: 66 LQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKIL 125
LQ+WDTAGQERFRTITTAYYRGAMGILLVYDVTDE SFNNI NW +N++ +A++ V IL
Sbjct: 62 LQVWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFNNIENWYQNVQSYANEGVELIL 121
Query: 126 VGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADT 184
VGNK D+DE KR V T +GQALAD++GI F E S+KTN+NVEE F+S+A I+ +A T
Sbjct: 122 VGNKCDLDE-KRVVSTEQGQALADKFGIPFLEASSKTNINVEECFYSVATRIRDTVAKT 179
>ARA5_ARATH (P28188) Ras-related protein ARA-5
Length = 258
Score = 251 bits (642), Expect = 7e-67
Identities = 126/209 (60%), Positives = 160/209 (76%), Gaps = 12/209 (5%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRFSD S+ S+I+TIG+DFKIRT+E DGK IKLQIWD
Sbjct: 59 EYDYLFKLLLIGDSGVGKSCLLLRFSDDSYVESYISTIGVDFKIRTVEQDGKTIKLQIWD 118
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTDE SFNN++ W+ I+++ASDNVNK+LVGNK+
Sbjct: 119 TAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQWLSEIDRYASDNVNKLLVGNKS 178
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLAD--TDSKS 188
D+ E+ RA+P +A ADE GI F ETSAK NVE+ F +++ IK+R+A + +
Sbjct: 179 DLTEN-RAIPYETAKAFADEIGIPFMETSAKDATNVEQAFMAMSASIKERMASQPAGNNA 237
Query: 189 EPQTIKI-NQPDQGAGAAQAAQKSACCGS 216
P T++I QP AQK+ CC +
Sbjct: 238 RPPTVQIRGQP--------VAQKNGCCST 258
>RB10_MOUSE (P61027) Ras-related protein Rab-10
Length = 200
Score = 248 bits (634), Expect = 6e-66
Identities = 120/207 (57%), Positives = 156/207 (74%), Gaps = 8/207 (3%)
Query: 8 ARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQ 67
A+ YD L KLLLIGDSGVGK+C+L RFSD +F T+FI+TIGIDFKI+T+EL GK+IKLQ
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQ 61
Query: 68 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
IWDTAGQERF TITT+YYRGAMGI+LVYD+T+ SF NI W+RNI++HA+++V ++L+G
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLG 121
Query: 128 NKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSK 187
NK DMD+ KR VP KG+ +A E+GI+FFETSAK N+N+E+ F ++A DI ++ +
Sbjct: 122 NKCDMDD-KRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEPN 180
Query: 188 SEPQTIKINQPDQGAGAAQAAQKSACC 214
SE D +G KS CC
Sbjct: 181 SE-------NVDISSGGGVTGWKSKCC 200
>RB10_HUMAN (P61026) Ras-related protein Rab-10
Length = 200
Score = 248 bits (634), Expect = 6e-66
Identities = 120/207 (57%), Positives = 156/207 (74%), Gaps = 8/207 (3%)
Query: 8 ARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQ 67
A+ YD L KLLLIGDSGVGK+C+L RFSD +F T+FI+TIGIDFKI+T+EL GK+IKLQ
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQ 61
Query: 68 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
IWDTAGQERF TITT+YYRGAMGI+LVYD+T+ SF NI W+RNI++HA+++V ++L+G
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLG 121
Query: 128 NKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSK 187
NK DMD+ KR VP KG+ +A E+GI+FFETSAK N+N+E+ F ++A DI ++ +
Sbjct: 122 NKCDMDD-KRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEPN 180
Query: 188 SEPQTIKINQPDQGAGAAQAAQKSACC 214
SE D +G KS CC
Sbjct: 181 SE-------NVDISSGGGVTGWKSKCC 200
>RB10_CANFA (P24409) Ras-related protein Rab-10
Length = 200
Score = 248 bits (634), Expect = 6e-66
Identities = 120/207 (57%), Positives = 156/207 (74%), Gaps = 8/207 (3%)
Query: 8 ARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQ 67
A+ YD L KLLLIGDSGVGK+C+L RFSD +F T+FI+TIGIDFKI+T+EL GK+IKLQ
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQ 61
Query: 68 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
IWDTAGQERF TITT+YYRGAMGI+LVYD+T+ SF NI W+RNI++HA+++V ++L+G
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLG 121
Query: 128 NKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSK 187
NK DMD+ KR VP KG+ +A E+GI+FFETSAK N+N+E+ F ++A DI ++ +
Sbjct: 122 NKCDMDD-KRVVPKGKGEQIAREHGIRFFETSAKVNINIEKAFLTLAEDILRKTPVKEPN 180
Query: 188 SEPQTIKINQPDQGAGAAQAAQKSACC 214
SE D +G KS CC
Sbjct: 181 SE-------NVDISSGGGVTGWKSKCC 200
>RIC1_ORYSA (P40392) Ras-related protein RIC1
Length = 202
Score = 246 bits (629), Expect = 2e-65
Identities = 122/204 (59%), Positives = 155/204 (75%), Gaps = 6/204 (2%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D S+ S+I+TIG+DFKIRT+E DGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W+ I+++AS+NVNK+LVGNK
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKC 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSKSEP 190
D+ E+ R V G+ALADE GI F ETSAK NVE+ F ++A +IK R+A +
Sbjct: 124 DLAEN-RVVSYEAGKALADEIGIPFLETSAKDATNVEKAFMTMAGEIKNRMASQGRTNAS 182
Query: 191 QTIKINQPDQGAGAAQAAQKSACC 214
+ + P Q AQ+S+CC
Sbjct: 183 KPATVQMPRQ-----PVAQQSSCC 201
>YPT2_MAIZE (Q05737) GTP-binding protein YPTM2
Length = 203
Score = 244 bits (622), Expect = 1e-64
Identities = 123/209 (58%), Positives = 157/209 (74%), Gaps = 12/209 (5%)
Query: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YDYL KLLLIGDSGVGKSCLLLRF+D S+ S+I+TIG+DFKIRT+E DGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W+ I+++ASDNVNK+LVGNK+
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKS 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLAD--TDSKS 188
D+ +K V T +A ADE GI F ETSAK NV++ F ++A IK R+A + +
Sbjct: 124 DLTANK-VVATETAKAFADEMGIPFMETSAKNATNVQQAFMAMAASIKDRMASQPAAANA 182
Query: 189 EPQTIKI-NQPDQGAGAAQAAQKSACCGS 216
P T++I QP QK++CC S
Sbjct: 183 RPATVQIRGQP--------VNQKTSCCSS 203
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.318 0.134 0.379
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,072,587
Number of Sequences: 164201
Number of extensions: 861618
Number of successful extensions: 4917
Number of sequences better than 10.0: 748
Number of HSP's better than 10.0 without gapping: 635
Number of HSP's successfully gapped in prelim test: 113
Number of HSP's that attempted gapping in prelim test: 3367
Number of HSP's gapped (non-prelim): 762
length of query: 216
length of database: 59,974,054
effective HSP length: 106
effective length of query: 110
effective length of database: 42,568,748
effective search space: 4682562280
effective search space used: 4682562280
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)
Medicago: description of AC125368.9