BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC124972.9 + phase: 0 /pseudo
(527 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TT12_ARATH (Q9LYT3) TRANSPARENT TESTA 12 protein 210 8e-54
YAO6_SCHPO (Q10085) Hypothetical protein C11D3.06 in chromosome I 57 9e-08
NORM_PASMU (Q9CMZ9) Probable multidrug resistance protein norM (... 57 1e-07
NORM_HAEIN (P45272) Probable multidrug resistance protein norM (... 56 2e-07
NOM1_PSEAE (Q9I3Y3) Probable multidrug resistance protein norM 1... 55 4e-07
YD38_YEAST (Q05497) Hypothetical 77.8 kDa protein in MRPS28-HXT7... 53 2e-06
NORM_VIBCH (Q9KRU4) Probable multidrug resistance protein norM (... 50 1e-05
NORM_DEIRA (Q9RY44) Probable multidrug resistance protein norM (... 50 1e-05
NORM_VIBVU (Q8D9N8) Probable multidrug resistance protein norM (... 49 4e-05
NORM_SALTY (Q8ZPP2) Multidrug resistance protein norM (Na(+)/dru... 49 4e-05
NORM_SALTI (Q8Z6N7) Multidrug resistance protein norM (Na(+)/dru... 49 4e-05
NORM_VIBPA (O82855) Multidrug resistance protein norM (Na(+)/dru... 47 9e-05
NORM_BACSU (O31855) Probable multidrug resistance protein norM (... 44 8e-04
NORM_ECOLI (P37340) Multidrug resistance protein norM (Na(+)/dru... 44 0.001
NORM_ECOL6 (Q8FH68) Multidrug resistance protein norM (Na(+)/dru... 44 0.001
NORM_ECO57 (P58164) Multidrug resistance protein norM (Na(+)/dru... 44 0.001
NORM_BURVI (Q9F5N7) Probable multidrug resistance protein norM (... 43 0.002
NOM2_PSEAE (Q9HTR0) Probable multidrug resistance protein norM 2... 42 0.004
NORM_BACHD (Q9KEJ2) Probable multidrug resistance protein norM (... 39 0.033
NORM_SYNY3 (Q55364) Probable multidrug resistance protein norM (... 38 0.057
>TT12_ARATH (Q9LYT3) TRANSPARENT TESTA 12 protein
Length = 507
Score = 210 bits (534), Expect = 8e-54
Identities = 123/201 (61%), Positives = 139/201 (68%), Gaps = 23/201 (11%)
Query: 274 KLTVASAFMLWAAPQSHCGTGFYFHLSISIWYVNNFSLNNVSCLFVNMLSNHDSPSKCTS 333
KLTVASA ML + IWY N L +S L N + D+ S C
Sbjct: 278 KLTVASAVML----------------CLEIWY--NQGLVIISGLLSNPTISLDAISIC-- 317
Query: 334 IFSMNYLNWDMQVMLGLGAAASVRVSNELGAAHPRVAKFSVFVVNGNSMLISVIFAAIIL 393
M YLNWDMQ MLGL AA SVRVSNELGA +PRVA SV VVN ++LIS + I+L
Sbjct: 318 ---MYYLNWDMQFMLGLSAAISVRVSNELGAGNPRVAMLSVVVVNITTVLISSVLCVIVL 374
Query: 394 ILRVGLSRLFTSDS*VIEAVSDLTPLLAISVLLNGIQPILSGVAIGCGWQALVAYVNLVC 453
+ RVGLS+ FTSD+ VI AVSDL PLLA+S+ LNGIQPILSGVAIG GWQA+VAYVNLV
Sbjct: 375 VFRVGLSKAFTSDAEVIAAVSDLFPLLAVSIFLNGIQPILSGVAIGSGWQAVVAYVNLVT 434
Query: 454 YYVIGLTVGCVLGFKTSLGVA 474
YYVIGL +GCVLGFKTSLGVA
Sbjct: 435 YYVIGLPIGCVLGFKTSLGVA 455
Score = 46.6 bits (109), Expect = 2e-04
Identities = 23/44 (52%), Positives = 26/44 (58%), Gaps = 2/44 (4%)
Query: 13 HSRTNIANLSSDDVEELLEHR--PVELRWWLKLVAWESWLLWIL 54
HS + I SS ++EE L R V RWWLKL WES LLW L
Sbjct: 15 HSDSQITERSSPEIEEFLRRRGSTVTPRWWLKLAVWESKLLWTL 58
>YAO6_SCHPO (Q10085) Hypothetical protein C11D3.06 in chromosome I
Length = 455
Score = 57.4 bits (137), Expect = 9e-08
Identities = 38/126 (30%), Positives = 63/126 (49%), Gaps = 8/126 (6%)
Query: 346 VMLGLGAAASVRVSNELGAAHPRVAKFSVFVVNGNSMLISVIFAAIILILRVGL----SR 401
+ GLG S RV+ LGA P A + V + ++ V ++I+I + + R
Sbjct: 280 IPFGLGIITSNRVAYYLGAGLPDNASLTAKV----AAIVGVAVGSVIMITMIAVRNIYGR 335
Query: 402 LFTSDS*VIEAVSDLTPLLAISVLLNGIQPILSGVAIGCGWQALVAYVNLVCYYVIGLTV 461
+FT+D VI+ V+ + PL+A + + + + G G G Q + A VN+ YY+ L +
Sbjct: 336 IFTNDPDVIQLVALVMPLVAAFQISDSLNGTMGGALRGTGRQKVGAIVNITAYYLFALPL 395
Query: 462 GCVLGF 467
G L F
Sbjct: 396 GIYLAF 401
>NORM_PASMU (Q9CMZ9) Probable multidrug resistance protein norM
(Na(+)/drug antiporter) (Multidrug-efflux transporter)
Length = 464
Score = 57.0 bits (136), Expect = 1e-07
Identities = 37/133 (27%), Positives = 65/133 (48%), Gaps = 6/133 (4%)
Query: 336 SMNYLNWDMQVMLGLGAAASVRVSNELGAAHPRVAK---FSVFVVNGNSMLISVIFAAII 392
++N ++ + + LG AA++ V LG AK +S +V +LI+VI A +
Sbjct: 282 ALNTSSFLFMLPMSLGMAATILVGQRLGEGAADKAKQVSYSALIVG---LLIAVITATLT 338
Query: 393 LILRVGLSRLFTSDS*VIEAVSDLTPLLAISVLLNGIQPILSGVAIGCGWQALVAYVNLV 452
+I RV ++ +F D VI L + A+ + +Q + G G + Y+ L
Sbjct: 339 VIFRVEIAEIFVKDRDVIAMAGTLLLIAALYQFSDTVQVVAGGALRGYKDTKAILYITLF 398
Query: 453 CYYVIGLTVGCVL 465
CY+V+G+ +G L
Sbjct: 399 CYWVVGMPMGYTL 411
>NORM_HAEIN (P45272) Probable multidrug resistance protein norM
(Na(+)/drug antiporter) (Multidrug-efflux transporter)
Length = 464
Score = 56.2 bits (134), Expect = 2e-07
Identities = 32/131 (24%), Positives = 65/131 (49%)
Query: 336 SMNYLNWDMQVMLGLGAAASVRVSNELGAAHPRVAKFSVFVVNGNSMLISVIFAAIILIL 395
++N ++ + +G A ++ V LGA P+ AK + + ++++ A I +
Sbjct: 282 TLNTSSFIFMFPMSIGMATTILVGQALGAGSPQNAKKIGYAALLLGLTVTIVTALITIFF 341
Query: 396 RVGLSRLFTSDS*VIEAVSDLTPLLAISVLLNGIQPILSGVAIGCGWQALVAYVNLVCYY 455
R ++ +F +D VI ++L A+ + IQ ++ G+ G ++ Y+ L Y+
Sbjct: 342 RYEIASIFVTDEIVIAMAANLLLFAALYQFSDTIQMVVGGILRGYKDTKVILYITLFSYW 401
Query: 456 VIGLTVGCVLG 466
VIG+ +G LG
Sbjct: 402 VIGVPLGYTLG 412
>NOM1_PSEAE (Q9I3Y3) Probable multidrug resistance protein norM 1
(Na(+)/drug antiporter) (Multidrug-efflux transporter)
Length = 477
Score = 55.1 bits (131), Expect = 4e-07
Identities = 36/131 (27%), Positives = 65/131 (49%)
Query: 336 SMNYLNWDMQVMLGLGAAASVRVSNELGAAHPRVAKFSVFVVNGNSMLISVIFAAIILIL 395
++N+ + LG A +VRV + LGA PR A+F+ V ++ + + A+++L+L
Sbjct: 287 ALNFSALVFMIPYSLGMAVTVRVGHNLGAGLPRDARFAAGVGMAAALGYACVSASLMLLL 346
Query: 396 RVGLSRLFTSDS*VIEAVSDLTPLLAISVLLNGIQPILSGVAIGCGWQALVAYVNLVCYY 455
R ++ +++ D VI + L A+ + +Q +G G + + L Y+
Sbjct: 347 REQIAAMYSPDPAVIAIAASLIVFSALFQFSDALQVTAAGALRGYQDTRVTMIMTLFAYW 406
Query: 456 VIGLTVGCVLG 466
IGL VG LG
Sbjct: 407 GIGLPVGYSLG 417
>YD38_YEAST (Q05497) Hypothetical 77.8 kDa protein in MRPS28-HXT7
intergenic region
Length = 695
Score = 52.8 bits (125), Expect = 2e-06
Identities = 30/122 (24%), Positives = 60/122 (48%)
Query: 346 VMLGLGAAASVRVSNELGAAHPRVAKFSVFVVNGNSMLISVIFAAIILILRVGLSRLFTS 405
+ +G + S R++N +GA A S V S + I I++ R ++ +++
Sbjct: 502 IPFAIGISTSTRIANFIGAKRTDFAHISSQVGLSFSFIAGFINCCILVFGRNLIANIYSK 561
Query: 406 DS*VIEAVSDLTPLLAISVLLNGIQPILSGVAIGCGWQALVAYVNLVCYYVIGLTVGCVL 465
D VI+ ++ + PL+ I + + + G G Q+L + VNL+ YY+ G+ + +L
Sbjct: 562 DPEVIKLIAQVLPLVGIVQNFDSLNAVAGSCLRGQGMQSLGSIVNLMAYYLFGIPLALIL 621
Query: 466 GF 467
+
Sbjct: 622 SW 623
>NORM_VIBCH (Q9KRU4) Probable multidrug resistance protein norM
(Na(+)/drug antiporter) (Multidrug-efflux transporter)
Length = 461
Score = 50.4 bits (119), Expect = 1e-05
Identities = 33/155 (21%), Positives = 70/155 (44%), Gaps = 2/155 (1%)
Query: 336 SMNYLNWDMQVMLGLGAAASVRVSNELGAAHPRVAKFSVFVVNGNSMLISVIFAAIILIL 395
++N+ + + +GAA S+RV ++LG + A + V + + I A + ++
Sbjct: 280 ALNFSSLVFMFPMSIGAAVSIRVGHKLGEQDTKGAAIAANVGLMTGLATACITALLTVLF 339
Query: 396 RVGLSRLFTSDS*VIEAVSDLTPLLAISVLLNGIQPILSGVAIGCGWQALVAYVNLVCYY 455
R ++ L+T + V+ L AI ++ +Q + +G G + + + Y+
Sbjct: 340 REQIALLYTENQVVVALAMQLLLFAAIYQCMDAVQVVAAGSLRGYKDMTAIFHRTFISYW 399
Query: 456 VIGLTVGCVLGFKTSLGVARSTMNLIVIYIGHLVG 490
V+GL G +LG L + ++G ++G
Sbjct: 400 VLGLPTGYILGMTNWL--TEQPLGAKGFWLGFIIG 432
>NORM_DEIRA (Q9RY44) Probable multidrug resistance protein norM
(Na(+)/drug antiporter) (Multidrug-efflux transporter)
Length = 451
Score = 50.4 bits (119), Expect = 1e-05
Identities = 39/132 (29%), Positives = 63/132 (47%), Gaps = 5/132 (3%)
Query: 346 VMLGLGAAASVRVSNELGAAHPRVAKFSVFVVNGNSMLISVIFAAIILILRVGLSRLFTS 405
V LG+ +A VRV E GA A+ + V G S + + FA I L + +F +
Sbjct: 287 VPLGIASATGVRVGTEAGAGRLAQARRAGLVGLGLSSAVMLTFAVIELAAPRTVFSVFVN 346
Query: 406 -----DS*VIEAVSDLTPLLAISVLLNGIQPILSGVAIGCGWQALVAYVNLVCYYVIGLT 460
++ +I A + + A+ L++G+Q +G G + V+LV Y+V+GL
Sbjct: 347 VNDPANAGLIAAATGFLSIAALFQLMDGLQVTANGALRGLQDTRVPLLVSLVAYWVVGLG 406
Query: 461 VGCVLGFKTSLG 472
+G VL LG
Sbjct: 407 LGSVLSSVAGLG 418
>NORM_VIBVU (Q8D9N8) Probable multidrug resistance protein norM
(Na(+)/drug antiporter) (Multidrug-efflux transporter)
Length = 483
Score = 48.5 bits (114), Expect = 4e-05
Identities = 35/131 (26%), Positives = 61/131 (45%)
Query: 336 SMNYLNWDMQVMLGLGAAASVRVSNELGAAHPRVAKFSVFVVNGNSMLISVIFAAIILIL 395
++N+ + + + +GAA S+RV + LG A+ + V + +V A + +IL
Sbjct: 303 AINFSSLVFMLPMSIGAATSIRVGHMLGEKSTEGARIASHVGILVGLSTAVFTALLTVIL 362
Query: 396 RVGLSRLFTSDS*VIEAVSDLTPLLAISVLLNGIQPILSGVAIGCGWQALVAYVNLVCYY 455
R ++ L+T + VI L AI + IQ I +G G + + Y+
Sbjct: 363 REQIALLYTDNRVVITLAMQLLIFTAIYQCTDAIQVIAAGALRGYKDMRAIFNRTFIAYW 422
Query: 456 VIGLTVGCVLG 466
++GL G VLG
Sbjct: 423 LLGLPTGYVLG 433
>NORM_SALTY (Q8ZPP2) Multidrug resistance protein norM (Na(+)/drug
antiporter) (Multidrug-efflux transporter)
Length = 457
Score = 48.5 bits (114), Expect = 4e-05
Identities = 38/155 (24%), Positives = 73/155 (46%), Gaps = 3/155 (1%)
Query: 336 SMNYLNWDMQVMLGLGAAASVRVSNELGAAHPRVAKFSVFVVNGNSMLISVIFAAIILIL 395
++N+ + + + L AA ++RV LG A+ + G + ++V+ A + L
Sbjct: 277 ALNFSSLMFVLPMSLAAAVTIRVGYRLGQGSTLDAQTAARTGLGVGICMAVVTAIFTVTL 336
Query: 396 RVGLSRLFTSDS*VIEAVSDLTPLLAISVLLNGIQPILSGVAIGCGWQALVAYVNLVCYY 455
R ++ L+ + V+ + L L A+ + + IQ I SG+ G + ++ Y+
Sbjct: 337 RKHIALLYNDNPEVVALAAQLMLLAAVYQISDSIQVIGSGILRGYKDTRSIFFITFTAYW 396
Query: 456 VIGLTVGCVLGFKTSLGVARSTMNLIVIYIGHLVG 490
V+GL G +L T L V R M ++G ++G
Sbjct: 397 VLGLPSGYILAL-TDLVVDR--MGPAGFWMGFIIG 428
>NORM_SALTI (Q8Z6N7) Multidrug resistance protein norM (Na(+)/drug
antiporter) (Multidrug-efflux transporter)
Length = 457
Score = 48.5 bits (114), Expect = 4e-05
Identities = 38/155 (24%), Positives = 73/155 (46%), Gaps = 3/155 (1%)
Query: 336 SMNYLNWDMQVMLGLGAAASVRVSNELGAAHPRVAKFSVFVVNGNSMLISVIFAAIILIL 395
++N+ + + + L AA ++RV LG A+ + G + ++V+ A + L
Sbjct: 277 ALNFSSLMFVLPMSLAAAVTIRVGYRLGQGSTLDAQTAARTGLGVGICMAVVTAIFTVTL 336
Query: 396 RVGLSRLFTSDS*VIEAVSDLTPLLAISVLLNGIQPILSGVAIGCGWQALVAYVNLVCYY 455
R ++ L+ + V+ + L L A+ + + IQ I SG+ G + ++ Y+
Sbjct: 337 RKHIALLYNDNPEVVALAAQLMLLAAVYQISDSIQVIGSGILRGYKDTRSIFFITFTAYW 396
Query: 456 VIGLTVGCVLGFKTSLGVARSTMNLIVIYIGHLVG 490
V+GL G +L T L V R M ++G ++G
Sbjct: 397 VLGLPSGYILAL-TDLVVDR--MGPAGFWMGFIIG 428
>NORM_VIBPA (O82855) Multidrug resistance protein norM (Na(+)/drug
antiporter) (Multidrug-efflux transporter)
Length = 456
Score = 47.4 bits (111), Expect = 9e-05
Identities = 31/131 (23%), Positives = 63/131 (47%)
Query: 336 SMNYLNWDMQVMLGLGAAASVRVSNELGAAHPRVAKFSVFVVNGNSMLISVIFAAIILIL 395
++N+ + + + +GAA S+RV + LG + A+ + V + ++ I A I ++
Sbjct: 276 AINFSSLVFMLPMSVGAAVSIRVGHRLGEENVDGARVASRVGIMVGLALATITAIITVLS 335
Query: 396 RVGLSRLFTSDS*VIEAVSDLTPLLAISVLLNGIQPILSGVAIGCGWQALVAYVNLVCYY 455
R ++ L+T++ VI L A+ + +Q I +G G + + Y+
Sbjct: 336 RELIAELYTNNPEVISLAMQLLLFAAVYQCTDAVQVIAAGALRGYKDMRAIFNRTFIAYW 395
Query: 456 VIGLTVGCVLG 466
++GL G +LG
Sbjct: 396 ILGLPTGYILG 406
>NORM_BACSU (O31855) Probable multidrug resistance protein norM
(Na(+)/drug antiporter) (Multidrug-efflux transporter)
Length = 452
Score = 44.3 bits (103), Expect = 8e-04
Identities = 40/155 (25%), Positives = 66/155 (41%)
Query: 336 SMNYLNWDMQVMLGLGAAASVRVSNELGAAHPRVAKFSVFVVNGNSMLISVIFAAIILIL 395
+MN+ + + L + A ++ V E GAA + A+ + ++ S+ AA IL+
Sbjct: 280 AMNFASLLYMLPLSVSMALTIVVGFEAGAARFKDARSYSLIGIMMAIGFSLFTAACILLF 339
Query: 396 RVGLSRLFTSDS*VIEAVSDLTPLLAISVLLNGIQPILSGVAIGCGWQALVAYVNLVCYY 455
R ++ ++TSD V+ L + + + G G V Y+
Sbjct: 340 REQIAGMYTSDPDVLRLTQHFLIYALFFQLSDAVAAPIQGALRGYKDVNYTLAAAFVSYW 399
Query: 456 VIGLTVGCVLGFKTSLGVARSTMNLIVIYIGHLVG 490
VIGL VG ++G TSLG + LI VG
Sbjct: 400 VIGLPVGYMVGTFTSLGAFGYWIGLIAGLAAGAVG 434
>NORM_ECOLI (P37340) Multidrug resistance protein norM (Na(+)/drug
antiporter) (Multidrug-efflux transporter)
Length = 457
Score = 43.5 bits (101), Expect = 0.001
Identities = 37/155 (23%), Positives = 70/155 (44%), Gaps = 3/155 (1%)
Query: 336 SMNYLNWDMQVMLGLGAAASVRVSNELGAAHPRVAKFSVFVVNGNSMLISVIFAAIILIL 395
++N+ + + + L AA ++RV LG A+ + + ++ + A + L
Sbjct: 277 ALNFSSLMFVLPMSLAAAVTIRVGYRLGQGSTLDAQTAARTGLMVGVCMATLTAIFTVSL 336
Query: 396 RVGLSRLFTSDS*VIEAVSDLTPLLAISVLLNGIQPILSGVAIGCGWQALVAYVNLVCYY 455
R ++ L+ + V+ + L L A+ + + IQ I SG+ G + Y+ Y+
Sbjct: 337 REQIALLYNDNPEVVTLAAHLMLLAAVYQISDSIQVIGSGILRGYKDTRSIFYITFTAYW 396
Query: 456 VIGLTVGCVLGFKTSLGVARSTMNLIVIYIGHLVG 490
V+GL G +L T L V M +IG ++G
Sbjct: 397 VLGLPSGYILAL-TDLVV--EPMGPAGFWIGFIIG 428
>NORM_ECOL6 (Q8FH68) Multidrug resistance protein norM (Na(+)/drug
antiporter) (Multidrug-efflux transporter)
Length = 457
Score = 43.5 bits (101), Expect = 0.001
Identities = 37/155 (23%), Positives = 70/155 (44%), Gaps = 3/155 (1%)
Query: 336 SMNYLNWDMQVMLGLGAAASVRVSNELGAAHPRVAKFSVFVVNGNSMLISVIFAAIILIL 395
++N+ + + + L AA ++RV LG A+ + + ++ + A + L
Sbjct: 277 ALNFSSLMFVLPMSLAAAVTIRVGYRLGQGSTLDAQTAARTGLMVGVCMATLTAIFTVSL 336
Query: 396 RVGLSRLFTSDS*VIEAVSDLTPLLAISVLLNGIQPILSGVAIGCGWQALVAYVNLVCYY 455
R ++ L+ + V+ + L L A+ + + IQ I SG+ G + Y+ Y+
Sbjct: 337 REQIALLYNDNPEVVTLAAHLMLLAAVYQISDSIQVIGSGILRGYKDTRSIFYITFTAYW 396
Query: 456 VIGLTVGCVLGFKTSLGVARSTMNLIVIYIGHLVG 490
V+GL G +L T L V M +IG ++G
Sbjct: 397 VLGLPSGYILAL-TDLVV--EPMGPAGFWIGFIIG 428
>NORM_ECO57 (P58164) Multidrug resistance protein norM (Na(+)/drug
antiporter) (Multidrug-efflux transporter)
Length = 457
Score = 43.5 bits (101), Expect = 0.001
Identities = 37/155 (23%), Positives = 70/155 (44%), Gaps = 3/155 (1%)
Query: 336 SMNYLNWDMQVMLGLGAAASVRVSNELGAAHPRVAKFSVFVVNGNSMLISVIFAAIILIL 395
++N+ + + + L AA ++RV LG A+ + + ++ + A + L
Sbjct: 277 ALNFSSLMFVLPMSLAAAVTIRVGYRLGQGSTLDAQTAARTGLMVGVCMATLTAIFTVSL 336
Query: 396 RVGLSRLFTSDS*VIEAVSDLTPLLAISVLLNGIQPILSGVAIGCGWQALVAYVNLVCYY 455
R ++ L+ + V+ + L L A+ + + IQ I SG+ G + Y+ Y+
Sbjct: 337 REQIALLYNDNPEVVTLAAHLMLLAAVYQISDSIQVIGSGILRGYKDTRSIFYITFTAYW 396
Query: 456 VIGLTVGCVLGFKTSLGVARSTMNLIVIYIGHLVG 490
V+GL G +L T L V M +IG ++G
Sbjct: 397 VLGLPSGYILAL-TDLVV--EPMGPAGFWIGFIIG 428
>NORM_BURVI (Q9F5N7) Probable multidrug resistance protein norM
(Na(+)/drug antiporter) (Multidrug-efflux transporter)
Length = 462
Score = 42.7 bits (99), Expect = 0.002
Identities = 37/167 (22%), Positives = 70/167 (41%), Gaps = 6/167 (3%)
Query: 336 SMNYLNWDMQVMLGLGAAASVRVSNELGAAHPRVAKFSVFVVNGNSMLISVIFAAIILIL 395
++N + V L +G AA+VRV +GA P A+ + FV G + + ++++
Sbjct: 286 ALNVASVAFMVPLAIGQAANVRVGYWIGAGDPVAARHAGFVALGLGVAFMSLSGLVLILA 345
Query: 396 RVGLSRLF-----TSDS*VIEAVSDLTPLLAISVLLNGIQPILSGVAIGCGWQALVAYVN 450
+ L+ +++ + + L + A+ +++G+Q + SG G +
Sbjct: 346 PHAIVGLYLHLDDPANAATVSLAASLLGIAAVFQIVDGMQTVGSGALRGLRDTRIPMLAA 405
Query: 451 LVCYYVIGLTVGCVLGFKTSLGVARSTMNLIVIYIGHLVGNDPWSFH 497
Y+ IG G L F LG AR + + + W FH
Sbjct: 406 TFGYWGIGFPTGYWLAFHAGLG-ARGLWWGLAAGLASVAVLMAWRFH 451
>NOM2_PSEAE (Q9HTR0) Probable multidrug resistance protein norM 2
(Na(+)/drug antiporter) (Multidrug-efflux transporter)
Length = 488
Score = 42.0 bits (97), Expect = 0.004
Identities = 34/134 (25%), Positives = 55/134 (40%), Gaps = 5/134 (3%)
Query: 346 VMLGLGAAASVRVSNELGAAHPRVAKFSVFVVNGNSMLISVIFAAII-----LILRVGLS 400
V +GL A + R+ GA A+ + V G L ++FA + I+ + L
Sbjct: 287 VPVGLSYATTYRIGQHFGAGRLLEARRAGRVGIGFGALCMLLFAGLFWWMPEAIIGLFLD 346
Query: 401 RLFTSDS*VIEAVSDLTPLLAISVLLNGIQPILSGVAIGCGWQALVAYVNLVCYYVIGLT 460
R ++ V L + A L +G Q + G G V L CY+++G+
Sbjct: 347 RDAPANREVAAMAVSLLAIAAWFELFDGTQNVAMGAIRGLKDARTTFLVGLACYWLVGVP 406
Query: 461 VGCVLGFKTSLGVA 474
+ C+L F G A
Sbjct: 407 LACLLAFAAGWGAA 420
>NORM_BACHD (Q9KEJ2) Probable multidrug resistance protein norM
(Na(+)/drug antiporter) (Multidrug-efflux transporter)
Length = 458
Score = 38.9 bits (89), Expect = 0.033
Identities = 31/152 (20%), Positives = 69/152 (45%)
Query: 321 MLSNHDSPSKCTSIFSMNYLNWDMQVMLGLGAAASVRVSNELGAAHPRVAKFSVFVVNGN 380
++S D+ + ++N+ ++ + L + ++ V E+GA A+ +
Sbjct: 265 LMSTFDTATIAAHQAAVNFASFLYMIPLSIAFTLTIAVGYEVGAKRVEDARQYSRLGITF 324
Query: 381 SMLISVIFAAIILILRVGLSRLFTSDS*VIEAVSDLTPLLAISVLLNGIQPILSGVAIGC 440
++++ ++ II +LR ++ L+T+DS V + L + + + GV G
Sbjct: 325 ALIMGLVAGVIIYVLRAPVASLYTNDSQVAWLIQQFLIYSIFFQLSDALATPIQGVLRGH 384
Query: 441 GWQALVAYVNLVCYYVIGLTVGCVLGFKTSLG 472
+ + LV +++IGL G +L + LG
Sbjct: 385 KDVNVPFVMALVSFWIIGLPTGYLLANFSPLG 416
>NORM_SYNY3 (Q55364) Probable multidrug resistance protein norM
(Na(+)/drug antiporter) (Multidrug-efflux transporter)
Length = 461
Score = 38.1 bits (87), Expect = 0.057
Identities = 36/150 (24%), Positives = 64/150 (42%), Gaps = 12/150 (8%)
Query: 346 VMLGLGAAASVRVSNELGAAHPRVAKFSVFVVNGNSMLISVIFAAIIL-----ILRVGLS 400
V L + AA+VRV G H + + V G ++L + +L I+ + L
Sbjct: 292 VPLAMSYAATVRVGQWFGQQHWPQIRQAALVSIGLAVLFMLTAGIALLAYPQQIIGLYLD 351
Query: 401 RLFTSDS*VIEAVSDLTPLLAISVLLNGIQPILSGVAIGCGWQALVAYVNLVCYYVIGLT 460
++ + + + A ++L+G+Q +GV G + + + Y+ IGLT
Sbjct: 352 LNDPANGEALNVGISIMKIAAFGLVLDGLQRTANGVLQGLQDTRIPMVLGTIAYWGIGLT 411
Query: 461 VGCVLGFKTSLGVARSTMNLIVIYIGHLVG 490
+LGF T L A ++IG +G
Sbjct: 412 ASYLLGFYTPLSGAG-------VWIGTYIG 434
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.345 0.150 0.516
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 54,284,906
Number of Sequences: 164201
Number of extensions: 2021427
Number of successful extensions: 8518
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 8487
Number of HSP's gapped (non-prelim): 30
length of query: 527
length of database: 59,974,054
effective HSP length: 115
effective length of query: 412
effective length of database: 41,090,939
effective search space: 16929466868
effective search space used: 16929466868
T: 11
A: 40
X1: 15 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 38 (21.6 bits)
S2: 68 (30.8 bits)
Medicago: description of AC124972.9