BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC124972.10 - phase: 1 /pseudo
(135 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
PAO_MAIZE (O64411) Polyamine oxidase precursor (EC 1.5.3.11) 46 2e-05
AOF2_MOUSE (Q6ZQ88) Amine oxidase flavin containing domain prote... 44 1e-04
AOF2_HUMAN (O60341) Amine oxidase flavin containing domain prote... 44 1e-04
CBP1_CANAL (P31225) Corticosteroid-binding protein 36 0.021
SMOX_HUMAN (Q9NWM0) Spermine oxidase (EC 1.5.3.-) (Polyamine oxi... 35 0.035
PAOX_MOUSE (Q8C0L6) Peroxisomal N1-acetyl-spermine/spermidine ox... 35 0.035
OXLA_AGKRH (P81382) L-amino-acid oxidase precursor (EC 1.4.3.2) ... 35 0.046
SMOX_MOUSE (Q99K82) Spermine oxidase (EC 1.5.3.-) (Polyamine oxi... 34 0.10
PAOX_BOVIN (Q865R1) Peroxisomal N1-acetyl-spermine/spermidine ox... 33 0.13
SPR5_CAEEL (Q9XWP6) Suppressor of presenilin 5 (P110b homolog) 33 0.17
PAOX_HUMAN (Q6QHF9) Peroxisomal N1-acetyl-spermine/spermidine ox... 32 0.39
AOFA_RAT (P21396) Amine oxidase [flavin-containing] A (EC 1.4.3.... 31 0.87
YB81_YEAST (P38326) Hypothetical 34.3 kDa protein in MCX1-PBP2 i... 30 1.1
OXLA_CROAD (O93364) L-amino-acid oxidase precursor (EC 1.4.3.2) ... 30 1.1
MENF_HAEIN (P44613) Menaquinone-specific isochorismate synthase ... 30 1.1
AOFA_MOUSE (Q64133) Amine oxidase [flavin-containing] A (EC 1.4.... 30 1.1
AOFA_BOVIN (P21398) Amine oxidase [flavin-containing] A (EC 1.4.... 30 1.1
AOFA_CANFA (P58027) Amine oxidase [flavin-containing] A (EC 1.4.... 30 1.5
PARE_MYCGA (Q59526) Topoisomerase IV subunit B (EC 5.99.1.-) (To... 30 1.9
AOFB_CAVPO (P58028) Amine oxidase [flavin-containing] B (EC 1.4.... 30 1.9
>PAO_MAIZE (O64411) Polyamine oxidase precursor (EC 1.5.3.11)
Length = 500
Score = 46.2 bits (108), Expect = 2e-05
Identities = 34/113 (30%), Positives = 49/113 (43%), Gaps = 4/113 (3%)
Query: 12 LLTKLIKFEPKLLDWKEAAIADIRVGVENKIILHFKNVFWPNEDFLEVVAEISNGCSYF- 70
L + LI+F+PKL WK AI + V KI L F FWP E S+ Y+
Sbjct: 299 LQSDLIQFKPKLPTWKVRAIYQFDMAVYTKIFLKFPRKFWPEGKGREFFLYASSRRGYYG 358
Query: 71 --LNLHKA-AGHSVLVYMPVGRQAKDIEKMSDEAAANFAFKQLKKILPDASSP 120
K +VL+ +++ IE+ SDE + L+K+ P P
Sbjct: 359 VWQEFEKQYPDANVLLVTVTDEESRRIEQQSDEQTKAEIMQVLRKMFPGKDVP 411
>AOF2_MOUSE (Q6ZQ88) Amine oxidase flavin containing domain protein
2 (AOF2 protein) (BRAF-HDAC complex protein BHC110)
Length = 853
Score = 43.5 bits (101), Expect = 1e-04
Identities = 33/108 (30%), Positives = 53/108 (48%), Gaps = 7/108 (6%)
Query: 17 IKFEPKLLDWKEAAIADIRVGVENKIILHFKNVFW-PNEDFLEVVAE--ISNGCSY-FLN 72
++F P L +WK +A+ + G NK++L F VFW P+ + V S G + F N
Sbjct: 638 VQFVPPLPEWKTSAVQRMGFGNLNKVVLCFDRVFWDPSVNLFGHVGSTTASRGELFLFWN 697
Query: 73 LHKAAGHSVLVYMPVGRQAKDIEKMSDEAAANFAFKQLKKILPDASSP 120
L+KA +L+ + G A +E +SD+ LK I ++ P
Sbjct: 698 LYKA---PILLALVAGEAAGIMENISDDVIVGRCLAILKGIFGSSAVP 742
>AOF2_HUMAN (O60341) Amine oxidase flavin containing domain protein
2 (AOF2 protein) (BRAF-HDAC complex protein BHC110)
Length = 852
Score = 43.5 bits (101), Expect = 1e-04
Identities = 33/108 (30%), Positives = 53/108 (48%), Gaps = 7/108 (6%)
Query: 17 IKFEPKLLDWKEAAIADIRVGVENKIILHFKNVFW-PNEDFLEVVAE--ISNGCSY-FLN 72
++F P L +WK +A+ + G NK++L F VFW P+ + V S G + F N
Sbjct: 637 VQFVPPLPEWKTSAVQRMGFGNLNKVVLCFDRVFWDPSVNLFGHVGSTTASRGELFLFWN 696
Query: 73 LHKAAGHSVLVYMPVGRQAKDIEKMSDEAAANFAFKQLKKILPDASSP 120
L+KA +L+ + G A +E +SD+ LK I ++ P
Sbjct: 697 LYKA---PILLALVAGEAAGIMENISDDVIVGRCLAILKGIFGSSAVP 741
>CBP1_CANAL (P31225) Corticosteroid-binding protein
Length = 489
Score = 36.2 bits (82), Expect = 0.021
Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 17 IKFEPKLLDWKEAAIADIRVGVENKIILHFKNVFWPN-EDFLEVVAEISNG 66
IK+EPKL +I I G K+I F +FW N +D +++A+ ++G
Sbjct: 274 IKWEPKLPQRLVESINSIHFGALGKVIFEFDRIFWDNSKDRFQIIADHTDG 324
>SMOX_HUMAN (Q9NWM0) Spermine oxidase (EC 1.5.3.-) (Polyamine
oxidase 1) (PAO-1) (PAOh1) (UNQ3039/PRO9854)
Length = 555
Score = 35.4 bits (80), Expect = 0.035
Identities = 37/119 (31%), Positives = 52/119 (43%), Gaps = 18/119 (15%)
Query: 19 FEPKLLDWKEAAIADIRVGVENKIILHFKNVFW-PNEDFLEVVAE---ISNGCSYFLNL- 73
F P L K AAI + +G +KI L F+ FW P + L+ V E S+ +Y L
Sbjct: 345 FRPGLPTEKVAAIHRLGIGTTDKIFLEFEEPFWGPECNSLQFVWEDEAESHTLTYPPELW 404
Query: 74 -HKAAGHSVLVYMP-----------VGRQAKDIEKMSDEAAANFAFKQLKKILPDASSP 120
K G VL Y P G +A +EK DEA A + L++ + + P
Sbjct: 405 YRKICGFDVL-YPPERYGHVLSGWICGEEALVMEKCDDEAVAEICTEMLRQFTGNPNIP 462
>PAOX_MOUSE (Q8C0L6) Peroxisomal N1-acetyl-spermine/spermidine
oxidase (EC 1.5.3.11) (Polyamine oxidase)
Length = 503
Score = 35.4 bits (80), Expect = 0.035
Identities = 20/45 (44%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Query: 19 FEPKLLDWKEAAIADIRVGVENKIILHFKNVFW-PNEDFLEVVAE 62
FEP L K AI + G NKI L F+ FW P+ F++VV E
Sbjct: 292 FEPPLPAKKAEAIKKLGFGTNNKIFLEFEEPFWEPDCQFIQVVWE 336
>OXLA_AGKRH (P81382) L-amino-acid oxidase precursor (EC 1.4.3.2)
(LAO) (LAAO) (Apoxin I)
Length = 516
Score = 35.0 bits (79), Expect = 0.046
Identities = 27/112 (24%), Positives = 49/112 (43%), Gaps = 3/112 (2%)
Query: 4 VLIHTHARLLTKLIKFEPKLLDWKEAAIADIRVGVENKIILHFKNVFWPNEDFL--EVVA 61
V++ T +R + +LIKF P LL K A+ + KI L FW ++ +
Sbjct: 308 VIVCTTSRAV-RLIKFNPPLLPKKAHALRSVHYRSGTKIFLTCTTKFWEDDGIHGGKSTT 366
Query: 62 EISNGCSYFLNLHKAAGHSVLVYMPVGRQAKDIEKMSDEAAANFAFKQLKKI 113
++ + Y+ N + G V++ +G A + + + A+ F L I
Sbjct: 367 DLPSRFIYYPNHNFTNGVGVIIAYGIGDDANFFQALDFKDCADIVFNDLSLI 418
>SMOX_MOUSE (Q99K82) Spermine oxidase (EC 1.5.3.-) (Polyamine
oxidase 1) (PAO-1) (PAOh1)
Length = 555
Score = 33.9 bits (76), Expect = 0.10
Identities = 35/119 (29%), Positives = 51/119 (42%), Gaps = 18/119 (15%)
Query: 19 FEPKLLDWKEAAIADIRVGVENKIILHFKNVFW-PNEDFLEVVAE-ISNGCSYF----LN 72
F P L K AAI + +G +KI L F+ FW P + L+ V E + C+ L
Sbjct: 345 FRPCLPTEKVAAIHRLGIGTTDKIFLEFEEPFWGPECNSLQFVWEDEAESCTLTYPPELW 404
Query: 73 LHKAAGHSVLVYMP-----------VGRQAKDIEKMSDEAAANFAFKQLKKILPDASSP 120
K G VL Y P G +A +E+ DEA A + L++ + + P
Sbjct: 405 YRKICGFDVL-YPPERYGHVLSGWICGEEALVMERCDDEAVAEICTEMLRQFTGNPNIP 462
>PAOX_BOVIN (Q865R1) Peroxisomal N1-acetyl-spermine/spermidine
oxidase (EC 1.5.3.11) (Polyamine oxidase) (Fragments)
Length = 492
Score = 33.5 bits (75), Expect = 0.13
Identities = 20/45 (44%), Positives = 24/45 (52%), Gaps = 1/45 (2%)
Query: 19 FEPKLLDWKEAAIADIRVGVENKIILHFKNVFW-PNEDFLEVVAE 62
FEP L K AI I G NKI L F+ FW P+ ++VV E
Sbjct: 281 FEPPLPTEKVEAIRKIGFGTNNKIFLEFEEPFWEPDCQHIQVVWE 325
>SPR5_CAEEL (Q9XWP6) Suppressor of presenilin 5 (P110b homolog)
Length = 770
Score = 33.1 bits (74), Expect = 0.17
Identities = 32/99 (32%), Positives = 43/99 (43%), Gaps = 9/99 (9%)
Query: 19 FEPKLLDWKEAAIADIRVGVENKIILHFKNVFWP----NEDFLEVVAEISNGCSYFLNLH 74
F P L D K AI +I G NK IL F VFW F+ V I S +N+
Sbjct: 497 FTPSLPDKKVEAIRNIGCGSVNKCILEFDRVFWTANGGRNQFVTVSPNIKTRGS--MNIW 554
Query: 75 KAA-GHSVLVYMPVGRQAKDIEKMSDEAAANFAFKQLKK 112
+ G VL VG +A + ++ D+ A L+K
Sbjct: 555 SSVPGSKVLCTYIVGEEA--MLELPDDVIIQNAMINLQK 591
>PAOX_HUMAN (Q6QHF9) Peroxisomal N1-acetyl-spermine/spermidine
oxidase (EC 1.5.3.11) (Polyamine oxidase)
(UNQ1923/PRO4398)
Length = 648
Score = 32.0 bits (71), Expect = 0.39
Identities = 32/124 (25%), Positives = 51/124 (40%), Gaps = 16/124 (12%)
Query: 19 FEPKLLDWKEAAIADIRVGVENKIILHFKNVFW-PNEDFLEVVAEISNGCS--------- 68
F+P L K AI I G NKI L F+ FW P+ +++V E ++
Sbjct: 437 FDPPLPAEKAEAIRKIGFGTNNKIFLEFEEPFWEPDCQLIQLVWEDTSPLEDAAPELQDA 496
Query: 69 ------YFLNLHKAAGHSVLVYMPVGRQAKDIEKMSDEAAANFAFKQLKKILPDASSPVT 122
F+ L A VL G +++ +E +SDE + L+++ + P
Sbjct: 497 WFRKLIGFVVLPAFASVHVLCGFIAGLESEFMETLSDEEVLLCLTQVLRRVTGNPRLPAP 556
Query: 123 IIVL 126
VL
Sbjct: 557 KSVL 560
>AOFA_RAT (P21396) Amine oxidase [flavin-containing] A (EC 1.4.3.4)
(Monoamine oxidase) (MAO-A)
Length = 526
Score = 30.8 bits (68), Expect = 0.87
Identities = 13/45 (28%), Positives = 25/45 (54%)
Query: 12 LLTKLIKFEPKLLDWKEAAIADIRVGVENKIILHFKNVFWPNEDF 56
+LT I F+P+L + I + +G K ++++K FW +D+
Sbjct: 276 ILTAKIHFKPELPPERNQLIQRLPMGAVIKCMVYYKEAFWKKKDY 320
>YB81_YEAST (P38326) Hypothetical 34.3 kDa protein in MCX1-PBP2
intergenic region
Length = 303
Score = 30.4 bits (67), Expect = 1.1
Identities = 18/49 (36%), Positives = 28/49 (56%), Gaps = 3/49 (6%)
Query: 12 LLTKLIKFEPKLLDWKEAAIADIRVGVENKIILHFKNVFWPNEDFLEVV 60
L KL E LDW A+ D R G+ ++++LH K+ F ++FL+ V
Sbjct: 231 LRPKLTTLEKSQLDW--ASYVD-RAGLNDELVLHNKDGFLARQEFLQRV 276
>OXLA_CROAD (O93364) L-amino-acid oxidase precursor (EC 1.4.3.2)
(LAO) (LAAO) (Apoxin I)
Length = 516
Score = 30.4 bits (67), Expect = 1.1
Identities = 25/112 (22%), Positives = 47/112 (41%), Gaps = 3/112 (2%)
Query: 4 VLIHTHARLLTKLIKFEPKLLDWKEAAIADIRVGVENKIILHFKNVFWPNEDFL--EVVA 61
V++ T +R + IKFEP L K A+ + KI L FW ++ +
Sbjct: 308 VIVCTTSRAARR-IKFEPPLPPKKAHALRSVHYRSGTKIFLTCTKKFWEDDGIHGGKSTT 366
Query: 62 EISNGCSYFLNLHKAAGHSVLVYMPVGRQAKDIEKMSDEAAANFAFKQLKKI 113
++ + Y+ N + +G V++ +G A + + + A+ L I
Sbjct: 367 DLPSRFIYYPNHNFTSGVGVIIAYGIGDDANFFQALDFKDCADIVINDLSLI 418
>MENF_HAEIN (P44613) Menaquinone-specific isochorismate synthase (EC
5.4.4.2) (Isochorismate mutase)
Length = 430
Score = 30.4 bits (67), Expect = 1.1
Identities = 30/101 (29%), Positives = 44/101 (42%), Gaps = 8/101 (7%)
Query: 12 LLTKLIKFEPKLLDWKEAAIADIRVGVENKIILHFKNVFWPNE-----DFLEVVAEISNG 66
L T+L E DW A+ +I+ G KI+L + F + DFL + + G
Sbjct: 158 LHTELRANERTWCDWVNQALVEIKSGELTKIVLANETTFHLKQAINAYDFLAESEKQNQG 217
Query: 67 CSYFLNLHKAAGHSVLV-YMPVGRQAKDIEKMSDEAAANFA 106
C +FL + HSV V P A++ + EA A A
Sbjct: 218 CYHFLWAENS--HSVFVGSTPERLFAREYNLLLTEALAGTA 256
>AOFA_MOUSE (Q64133) Amine oxidase [flavin-containing] A (EC
1.4.3.4) (Monoamine oxidase) (MAO-A)
Length = 526
Score = 30.4 bits (67), Expect = 1.1
Identities = 13/45 (28%), Positives = 25/45 (54%)
Query: 12 LLTKLIKFEPKLLDWKEAAIADIRVGVENKIILHFKNVFWPNEDF 56
+LT I F+P+L + I + +G K ++++K FW +D+
Sbjct: 276 VLTAKIHFKPELPPERNQLIQRLPMGAVIKCMVYYKEAFWKKKDY 320
>AOFA_BOVIN (P21398) Amine oxidase [flavin-containing] A (EC
1.4.3.4) (Monoamine oxidase) (MAO-A)
Length = 527
Score = 30.4 bits (67), Expect = 1.1
Identities = 13/44 (29%), Positives = 23/44 (51%)
Query: 13 LTKLIKFEPKLLDWKEAAIADIRVGVENKIILHFKNVFWPNEDF 56
LT I F P+L + I + +G K ++++K FW +D+
Sbjct: 277 LTAKIHFRPELPSERNQLIQRLPMGAVIKCMMYYKEAFWKKKDY 320
>AOFA_CANFA (P58027) Amine oxidase [flavin-containing] A (EC
1.4.3.4) (Monoamine oxidase) (MAO-A)
Length = 527
Score = 30.0 bits (66), Expect = 1.5
Identities = 13/44 (29%), Positives = 23/44 (51%)
Query: 13 LTKLIKFEPKLLDWKEAAIADIRVGVENKIILHFKNVFWPNEDF 56
LT I F P+L + I + +G K ++++K FW +D+
Sbjct: 277 LTAKIHFRPELPSERNQLIQRLPMGAIIKCMMYYKEAFWKKKDY 320
>PARE_MYCGA (Q59526) Topoisomerase IV subunit B (EC 5.99.1.-)
(TopIIB)
Length = 633
Score = 29.6 bits (65), Expect = 1.9
Identities = 27/112 (24%), Positives = 48/112 (42%), Gaps = 6/112 (5%)
Query: 15 KLIKFEPKLLDW---KEAAIADIRVGVENKIILH---FKNVFWPNEDFLEVVAEISNGCS 68
KLI + K DW KE + V V KII + KN + E + V ++
Sbjct: 300 KLINNKDKGFDWSDLKEGLSVVLSVQVPEKIIAYEGQTKNKLFTQEVKVAVAKILTQQLF 359
Query: 69 YFLNLHKAAGHSVLVYMPVGRQAKDIEKMSDEAAANFAFKQLKKILPDASSP 120
YFL ++A ++ + ++AK+ K + E + +++L +P
Sbjct: 360 YFLEENQADAKQLIERFKLIKEAKEAAKKAKENTKKLKSAKSERVLYGKLTP 411
>AOFB_CAVPO (P58028) Amine oxidase [flavin-containing] B (EC
1.4.3.4) (Monoamine oxidase) (MAO-B)
Length = 519
Score = 29.6 bits (65), Expect = 1.9
Identities = 13/40 (32%), Positives = 23/40 (57%)
Query: 17 IKFEPKLLDWKEAAIADIRVGVENKIILHFKNVFWPNEDF 56
I F+P L K ++ + +G K I+++K+ FW +DF
Sbjct: 271 IHFKPPLPMMKNQLVSRVPLGSVIKCIVYYKDPFWRKKDF 310
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.324 0.138 0.404
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,479,469
Number of Sequences: 164201
Number of extensions: 525641
Number of successful extensions: 1618
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 1594
Number of HSP's gapped (non-prelim): 33
length of query: 135
length of database: 59,974,054
effective HSP length: 98
effective length of query: 37
effective length of database: 43,882,356
effective search space: 1623647172
effective search space used: 1623647172
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 59 (27.3 bits)
Medicago: description of AC124972.10