BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC124972.1 + phase: 0 
         (198 letters)

Database: sprot 
           164,201 sequences; 59,974,054 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

PPRB_HUMAN (Q15648) Peroxisome proliferator-activated receptor b...    29  6.2
ITN1_XENLA (O42287) Intersectin 1                                      29  6.2
YAB9_YEAST (P31380) Hypothetical 128.5 kDa helicase in ATS1-TPD3...    29  8.1
G123_HUMAN (Q86SQ6) Probable G protein-coupled receptor 123            29  8.1

>PPRB_HUMAN (Q15648) Peroxisome proliferator-activated receptor
           binding protein (PBP) (PPAR binding protein) (Thyroid
           hormone receptor-associated protein complex 220 kDa
           component) (Trap220) (Thyroid receptor interacting
           protein 2) (TRIP2) (p53 regulatory
          Length = 1581

 Score = 29.3 bits (64), Expect = 6.2
 Identities = 18/74 (24%), Positives = 36/74 (48%), Gaps = 3/74 (4%)

Query: 107 LFPVPINNNKASFDSLASVDSLNSVQVFPF-EEYSSPPTTPPHPFMATKDTVTKAEMKKF 165
           LF + +++    FD   + D+L++  + P   + S+PPTT P P    + ++ +  M + 
Sbjct: 712 LFSMDVDSQNPIFDVNMTADTLDTPHITPAPSQCSTPPTTYPQPVPHPQPSIQR--MVRL 769

Query: 166 CGIHVVNDEFEDIL 179
                +  +  DIL
Sbjct: 770 SSSDSIGPDVTDIL 783


>ITN1_XENLA (O42287) Intersectin 1
          Length = 1270

 Score = 29.3 bits (64), Expect = 6.2
 Identities = 14/39 (35%), Positives = 22/39 (55%)

Query: 155 DTVTKAEMKKFCGIHVVNDEFEDILKLYLKRNFSKVKDF 193
           D V K    K   I V N++ +++ +LY K+ F K +DF
Sbjct: 585 DEVEKETRAKLQEIDVFNNQLKELRELYNKQQFQKQQDF 623


>YAB9_YEAST (P31380) Hypothetical 128.5 kDa helicase in ATS1-TPD3
           intergenic region
          Length = 1131

 Score = 28.9 bits (63), Expect = 8.1
 Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 3/66 (4%)

Query: 113 NNNKASFDSLASVDSLNSVQVFPFEEYSSPPTTPPHPFMATKDTVTKAEMKKFCGIHVVN 172
           NNN A  D+ +         V  F+E S+ PT  P P    ++T     ++      VV 
Sbjct: 424 NNNTAGADATSKEKEDTKAVVEGFDETSAEPTPAPAPAPVERET---KRIRNTTKPKVVE 480

Query: 173 DEFEDI 178
           DE +D+
Sbjct: 481 DEDDDV 486


>G123_HUMAN (Q86SQ6) Probable G protein-coupled receptor 123
          Length = 1280

 Score = 28.9 bits (63), Expect = 8.1
 Identities = 17/45 (37%), Positives = 23/45 (50%), Gaps = 1/45 (2%)

Query: 104 RVFLFPVPINNN-KASFDSLASVDSLNSVQVFPFEEYSSPPTTPP 147
           R++LFP  + N    + DS   + S NSV      + S PP TPP
Sbjct: 151 RLYLFPTFLGNKLPEAADSFGEIASGNSVIFTSVLQSSHPPGTPP 195


  Database: sprot
    Posted date:  Nov 25, 2004 10:54 AM
  Number of letters in database: 59,974,054
  Number of sequences in database:  164,201
  
Lambda     K      H
   0.324    0.139    0.416 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,631,637
Number of Sequences: 164201
Number of extensions: 973385
Number of successful extensions: 2384
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 2383
Number of HSP's gapped (non-prelim): 4
length of query: 198
length of database: 59,974,054
effective HSP length: 105
effective length of query: 93
effective length of database: 42,732,949
effective search space: 3974164257
effective search space used: 3974164257
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 63 (28.9 bits)