BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC124970.11 + phase: 0
(211 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
NFM_HUMAN (P07197) Neurofilament triplet M protein (160 kDa neur... 38 0.015
ABRA_PLAFC (P22620) 101 kDa malaria antigen (P101) (Acidic basic... 38 0.020
MNN4_YEAST (P36044) MNN4 protein 37 0.026
NFH_HUMAN (P12036) Neurofilament triplet H protein (200 kDa neur... 37 0.034
PRA1_BACAN (Q81U45) Foldase protein prsA 1 precursor (EC 5.2.1.8) 37 0.044
YG25_METJA (Q59020) Hypothetical protein MJ1625 36 0.058
RYR1_HUMAN (P21817) Ryanodine receptor 1 (Skeletal muscle-type r... 36 0.058
PRA1_BACCR (Q81GY5) Foldase protein prsA 1 precursor (EC 5.2.1.8) 36 0.058
DD21_MOUSE (Q9JIK5) Nucleolar RNA helicase II (Nucleolar RNA hel... 36 0.058
NMD2_YEAST (P38798) Nonsense-mediated mRNA decay protein 2 (Up-f... 36 0.075
TRT_DROME (P19351) Troponin T, skeletal muscle (Upheld protein) ... 35 0.17
LON1_ARATH (O64948) Lon protease homolog 1, mitochondrial precur... 35 0.17
DD21_HUMAN (Q9NR30) Nucleolar RNA helicase II (Nucleolar RNA hel... 35 0.17
LON1_SPIOL (O04979) Lon protease homolog 1, mitochondrial precur... 34 0.22
HS9A_PIG (O02705) Heat shock protein HSP 90-alpha (HSP 86) 34 0.22
HS9A_MOUSE (P07901) Heat shock protein HSP 90-alpha (HSP 86) (Tu... 34 0.22
HS9A_HORSE (Q9GKX7) Heat shock protein HSP 90-alpha (HSP 86) (Fr... 34 0.22
Y6G2_ENCCU (Q8SV63) Hypothetical protein ECU06_1620 34 0.29
DYHC_PARTE (Q27171) Dynein heavy chain, cytosolic (DYHC) 34 0.29
DP2S_METJA (Q58113) DNA polymerase II small subunit (EC 2.7.7.7)... 34 0.29
>NFM_HUMAN (P07197) Neurofilament triplet M protein (160 kDa
neurofilament protein) (Neurofilament medium
polypeptide) (NF-M) (Neurofilament 3)
Length = 915
Score = 38.1 bits (87), Expect = 0.015
Identities = 25/68 (36%), Positives = 39/68 (56%), Gaps = 9/68 (13%)
Query: 3 VDKDVEVKEVVEKETEHGEVEKESDQGVVEN-----ERKKKKGGEKSEKLIDEDSILRKS 57
V+ +VE KE VE+ET+ +E ++GVV N +KKGG+KSE E ++ K+
Sbjct: 801 VNGEVEGKEEVEQETKEKGSGREEEKGVVTNGLDLSPADEKKGGDKSE----EKVVVTKT 856
Query: 58 KSQILKDG 65
+I +G
Sbjct: 857 VEKITSEG 864
>ABRA_PLAFC (P22620) 101 kDa malaria antigen (P101) (Acidic basic
repeat antigen)
Length = 743
Score = 37.7 bits (86), Expect = 0.020
Identities = 19/55 (34%), Positives = 33/55 (59%)
Query: 4 DKDVEVKEVVEKETEHGEVEKESDQGVVENERKKKKGGEKSEKLIDEDSILRKSK 58
+K+ E KE EKE E E EKE ++ E + K+++ E+ E+++ E+ +SK
Sbjct: 689 EKEKEEKEKEEKEKEKEEKEKEKEEKEEEKKEKEEEQEEEEEEIVPENLTTEESK 743
Score = 33.9 bits (76), Expect = 0.29
Identities = 18/52 (34%), Positives = 30/52 (57%)
Query: 2 EVDKDVEVKEVVEKETEHGEVEKESDQGVVENERKKKKGGEKSEKLIDEDSI 53
E +K+ E KE EKE E E EKE + E + ++KK E+ ++ +E+ +
Sbjct: 682 EKEKEKEEKEKEEKEKEEKEKEKEEKEKEKEEKEEEKKEKEEEQEEEEEEIV 733
Score = 30.8 bits (68), Expect = 2.4
Identities = 20/74 (27%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 2 EVDKDVEVKEVVEKETEHGEVEKESDQGVVENERKKK--KGGEKSEKLID-EDSILRKSK 58
+++ +V+ KE E E EKE ++ E E K+K K EK EK + E+ K +
Sbjct: 661 QIEAEVDALAPKNKEEEEKEKEKEKEKEEKEKEEKEKEEKEKEKEEKEKEKEEKEEEKKE 720
Query: 59 SQILKDGDKPQVIP 72
+ ++ ++ +++P
Sbjct: 721 KEEEQEEEEEEIVP 734
Score = 30.0 bits (66), Expect = 4.1
Identities = 20/68 (29%), Positives = 34/68 (49%), Gaps = 6/68 (8%)
Query: 8 EVKEVVEKETE------HGEVEKESDQGVVENERKKKKGGEKSEKLIDEDSILRKSKSQI 61
E +E +EK+ E EV+ + + E E++K+K EK EK +E K K +
Sbjct: 646 ETEEEMEKQVEAITKQIEAEVDALAPKNKEEEEKEKEKEKEKEEKEKEEKEKEEKEKEKE 705
Query: 62 LKDGDKPQ 69
K+ +K +
Sbjct: 706 EKEKEKEE 713
Score = 29.6 bits (65), Expect = 5.4
Identities = 20/63 (31%), Positives = 35/63 (54%), Gaps = 5/63 (7%)
Query: 2 EVDKDVEVKEVVEKETEHGEVEKESDQGVVENERKKKKGGEKSEKLIDEDSILRKSKSQI 61
E +K+ E KE EKE E EKE ++ E E K+K+ EK E+ +++ + + +I
Sbjct: 678 EKEKEKE-KEKEEKEKE----EKEKEEKEKEKEEKEKEKEEKEEEKKEKEEEQEEEEEEI 732
Query: 62 LKD 64
+ +
Sbjct: 733 VPE 735
>MNN4_YEAST (P36044) MNN4 protein
Length = 1178
Score = 37.4 bits (85), Expect = 0.026
Identities = 27/94 (28%), Positives = 48/94 (50%), Gaps = 2/94 (2%)
Query: 2 EVDKDVEVKEVVEKETEHGEVEKESDQGVVENERKKKKGGEKSEKLIDEDSILRKSKSQI 61
E K E +E +KE E + ++E ++ E E KKK+ E+ EK+ +ED +K++ +
Sbjct: 1072 EEKKKKEEEEKKKKEEEEKKKQEEEEKKKKEEEEKKKQ--EEGEKMKNEDEENKKNEDEE 1129
Query: 62 LKDGDKPQVIPSYVKLPYPHLAKNKKKEEGQFKK 95
K ++ + K + KK+EE + KK
Sbjct: 1130 KKKNEEEEKKKQEEKNKKNEDEEKKKQEEEEKKK 1163
Score = 33.9 bits (76), Expect = 0.29
Identities = 24/91 (26%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
Query: 5 KDVEVKEVVEKETEHGEVEKESDQGVVENERKKKKGGEKSEKLIDEDSILRKSKSQILKD 64
K E +E +KE E + ++E ++ E E KKKK E+ +K +E+ ++ + + K+
Sbjct: 1043 KKKEEEEKKKKEEEEKKKKEEEEKKKKEEEEKKKKEEEEKKKKEEEEKKKQEEEEKKKKE 1102
Query: 65 GDKPQVIPSYVKLPYPHLAKNKKKEEGQFKK 95
++ + K+ +NKK E+ + KK
Sbjct: 1103 EEEKKKQEEGEKMKNED-EENKKNEDEEKKK 1132
Score = 33.9 bits (76), Expect = 0.29
Identities = 26/94 (27%), Positives = 47/94 (49%), Gaps = 2/94 (2%)
Query: 2 EVDKDVEVKEVVEKETEHGEVEKESDQGVVENERKKKKGGEKSEKLIDEDSILRKSKSQI 61
E K E +E +KE E + ++E ++ E E KKKK E+ EK E+ +K + +
Sbjct: 1048 EEKKKKEEEEKKKKEEEEKKKKEEEEKKKKEEEEKKKK--EEEEKKKQEEEEKKKKEEEE 1105
Query: 62 LKDGDKPQVIPSYVKLPYPHLAKNKKKEEGQFKK 95
K ++ + + + + + + KKK E + KK
Sbjct: 1106 KKKQEEGEKMKNEDEENKKNEDEEKKKNEEEEKK 1139
Score = 31.2 bits (69), Expect = 1.9
Identities = 20/93 (21%), Positives = 45/93 (47%)
Query: 3 VDKDVEVKEVVEKETEHGEVEKESDQGVVENERKKKKGGEKSEKLIDEDSILRKSKSQIL 62
V +D +++E+ + +KE ++ + E +KKK E+ +K +E+ +K + +
Sbjct: 1024 VYEDYAYAKLLEERKRREKKKKEEEEKKKKEEEEKKKKEEEEKKKKEEEEKKKKEEEEKK 1083
Query: 63 KDGDKPQVIPSYVKLPYPHLAKNKKKEEGQFKK 95
K ++ + + + KK+EEG+ K
Sbjct: 1084 KKEEEEKKKQEEEEKKKKEEEEKKKQEEGEKMK 1116
Score = 31.2 bits (69), Expect = 1.9
Identities = 22/94 (23%), Positives = 46/94 (48%)
Query: 2 EVDKDVEVKEVVEKETEHGEVEKESDQGVVENERKKKKGGEKSEKLIDEDSILRKSKSQI 61
E +K + +E +K+ E + +KE ++ + E +KKK E+ +K +E+ +K + +
Sbjct: 1047 EEEKKKKEEEEKKKKEEEEKKKKEEEEKKKKEEEEKKKKEEEEKKKQEEEEKKKKEEEEK 1106
Query: 62 LKDGDKPQVIPSYVKLPYPHLAKNKKKEEGQFKK 95
K + ++ + + KK EE + KK
Sbjct: 1107 KKQEEGEKMKNEDEENKKNEDEEKKKNEEEEKKK 1140
>NFH_HUMAN (P12036) Neurofilament triplet H protein (200 kDa
neurofilament protein) (Neurofilament heavy polypeptide)
(NF-H)
Length = 1026
Score = 37.0 bits (84), Expect = 0.034
Identities = 41/164 (25%), Positives = 67/164 (40%), Gaps = 9/164 (5%)
Query: 3 VDKDVEVKEVVEKETEH----GEVEKESDQGVVENERKKKKGGEKSEKLIDEDSILRKSK 58
V+K + +VE++TE EV +E ++ E E K+++GGE+ E E+ +
Sbjct: 447 VEKSEKETVIVEEQTEETQVTEEVTEEEEKEAKEEEGKEEEGGEEEEAEGGEEE-TKSPP 505
Query: 59 SQILKDGDKPQVIPSYVKLPYPHLAKNKKKEEGQFKKFMQLFSQLQVNIPFGEALDQMPV 118
++ +K P + P AK+ +KEE K ++ S + P E P
Sbjct: 506 AEEAASPEKEAKSPVKEEAKSPAEAKSPEKEEA--KSPAEVKSPEKAKSPAKEEAKSPPE 563
Query: 119 YAKFMKEMLTSRRKPKDDENI--ALSENCSAILQRKLPPKLKDP 160
KE S + K E E + + K P K K P
Sbjct: 564 AKSPEKEEAKSPAEVKSPEKAKSPAKEEAKSPAEAKSPEKAKSP 607
>PRA1_BACAN (Q81U45) Foldase protein prsA 1 precursor (EC 5.2.1.8)
Length = 287
Score = 36.6 bits (83), Expect = 0.044
Identities = 37/138 (26%), Positives = 62/138 (44%), Gaps = 9/138 (6%)
Query: 4 DKDVEVKEVVEKETEHGEVEKE--SDQGVVENERKKKKGGEKSEKLIDEDSILRKSKSQI 61
DK+V+ K+ E + ++G+ QG+ E K + +++ E +I K
Sbjct: 70 DKEVD-KKYDEMKKQYGDQFDTLLKQQGIKEETLKTGVRAQLAQEKAIEKTITDKE---- 124
Query: 62 LKDGDKPQVIPSYVKLPYPHLAKNKKKEEGQFKKFMQLFSQLQVNIPFGEALDQMPVY-- 119
LKD KP++ S++ + AK K+E GQ K F +L Q + E + +
Sbjct: 125 LKDNYKPEIKASHILVKDEATAKKVKEELGQGKSFEELAKQYSEDTGSKEKGGDLGFFGA 184
Query: 120 AKFMKEMLTSRRKPKDDE 137
K +KE + K K DE
Sbjct: 185 GKMVKEFEDAAYKLKKDE 202
>YG25_METJA (Q59020) Hypothetical protein MJ1625
Length = 671
Score = 36.2 bits (82), Expect = 0.058
Identities = 42/141 (29%), Positives = 65/141 (45%), Gaps = 31/141 (21%)
Query: 14 EKETEHGEVEKESDQGVVENERKKKKGGEKSEKLIDEDSILRKSKSQI-LKDGDKPQVIP 72
E+ E E++K+ +E + KK E S+ L DE I K QI LKD + V+P
Sbjct: 206 EEICERAEIDKKKRD---LSEEEIKKLFEASKNLFDE--IFNNRKPQIVLKDNEYFDVVP 260
Query: 73 SYVKLPYPHLAKNKKKEEGQFKKFMQLFSQLQVNIPFGEALDQMPVYAKFMKEMLTSRRK 132
+ KK +G KK+ F EA+D +AKF+ +++ + K
Sbjct: 261 I-----------DLKKYKGLEKKYYNSFL---------EAVDDY--FAKFLTKVVVKKEK 298
Query: 133 PKDDENIALSENCSAILQRKL 153
K ++ I EN IL+R+L
Sbjct: 299 SKIEKEIERQEN---ILRRQL 316
>RYR1_HUMAN (P21817) Ryanodine receptor 1 (Skeletal muscle-type
ryanodine receptor) (RyR1) (RYR-1) (Skeletal muscle
calcium release channel)
Length = 5038
Score = 36.2 bits (82), Expect = 0.058
Identities = 26/87 (29%), Positives = 46/87 (51%), Gaps = 8/87 (9%)
Query: 4 DKDV-EVKEVVEKE--TEHGEVEKESDQGVVENERKKKK-----GGEKSEKLIDEDSILR 55
D+DV ++ +++E E TE E E E ++G E+E +K++ EK ++ +E+
Sbjct: 1856 DEDVKQILKMIEPEVFTEEEEEEDEEEEGEEEDEEEKEEDEEETAQEKEDEEKEEEEAAE 1915
Query: 56 KSKSQILKDGDKPQVIPSYVKLPYPHL 82
K + L++G +P VKL HL
Sbjct: 1916 GEKEEGLEEGLLQMKLPESVKLQMCHL 1942
Score = 28.9 bits (63), Expect = 9.2
Identities = 19/62 (30%), Positives = 32/62 (50%), Gaps = 2/62 (3%)
Query: 2 EVDKDVEVKEVVEKETEHGEVEKESDQGVVENERKKKKGGEKSEKLIDEDSILRKSKSQI 61
E D++ E +E E+E E E E ++ E E ++ GEK E L E+ +L+ +
Sbjct: 1877 EEDEEEEGEEEDEEEKEEDEEETAQEKEDEEKEEEEAAEGEKEEGL--EEGLLQMKLPES 1934
Query: 62 LK 63
+K
Sbjct: 1935 VK 1936
>PRA1_BACCR (Q81GY5) Foldase protein prsA 1 precursor (EC 5.2.1.8)
Length = 286
Score = 36.2 bits (82), Expect = 0.058
Identities = 37/138 (26%), Positives = 62/138 (44%), Gaps = 9/138 (6%)
Query: 4 DKDVEVKEVVEKETEHGEVEKE--SDQGVVENERKKKKGGEKSEKLIDEDSILRKSKSQI 61
DKDV+ K+ E + ++G+ QG+ E K + +++ E +I K
Sbjct: 70 DKDVD-KKFDEMKKQYGDQFDTLLKQQGIKEETIKTGVRAQLAQEKAIEKTITDKE---- 124
Query: 62 LKDGDKPQVIPSYVKLPYPHLAKNKKKEEGQFKKFMQLFSQLQVNIPFGEALDQMPVY-- 119
LK+ KP++ S++ + AK K+E GQ K F +L Q + E + +
Sbjct: 125 LKENYKPEIKASHILVKDEATAKKVKEELGQGKSFEELAKQYSEDTGSKEKGGDLGYFTA 184
Query: 120 AKFMKEMLTSRRKPKDDE 137
K +KE + K K DE
Sbjct: 185 GKMVKEFEDAAYKLKKDE 202
>DD21_MOUSE (Q9JIK5) Nucleolar RNA helicase II (Nucleolar RNA
helicase Gu) (RH II/Gu) (DEAD-box protein 21)
Length = 851
Score = 36.2 bits (82), Expect = 0.058
Identities = 39/176 (22%), Positives = 77/176 (43%), Gaps = 27/176 (15%)
Query: 1 MEVDKDVEVKEVVEKETEHGEVEKESDQGVVENERKKKKGGEKSEKLIDEDSILRKSKSQ 60
+E D E KE++ +E E + + + + + GEKS KL K+
Sbjct: 101 LEKQADSETKEIITEEPSEEEADMPKPKKMKKGKEANGDAGEKSPKL----------KNG 150
Query: 61 ILKDGDKPQVIPSYVKLPYPHLAKNKKKEEG-QFKKFMQLFSQLQVNIP----------- 108
+ + ++ IP K+ A E+ + K + S+ +V+IP
Sbjct: 151 LSQPSEEEADIPKPKKMKKGKEANGDAGEKSPKLKNGLSQPSEEEVDIPKPKKMKKGKEA 210
Query: 109 FGEALDQMPVYAKFMKEMLTSRRKPKDDENIALSENCSAILQRKLPPKLKDPGAFT 164
G+A ++ P +K+ L+ +PK + + A E S+ ++++P + K+ GAF+
Sbjct: 211 SGDAGEKSP----RLKDGLSQPSEPKSNSSDAPGEESSSETEKEIPVEQKE-GAFS 261
>NMD2_YEAST (P38798) Nonsense-mediated mRNA decay protein 2
(Up-frameshift suppressor 2)
Length = 1089
Score = 35.8 bits (81), Expect = 0.075
Identities = 34/147 (23%), Positives = 64/147 (43%), Gaps = 21/147 (14%)
Query: 1 MEVDKDVEVKEVVEKETEHGEVEKESDQGVVENERKKKKGGEKS-EKLIDEDSILRKSKS 59
++ D+D+E+K + E E E++ E ERK ++ E+ +K++ E RKS+
Sbjct: 943 LDADRDIEMKRMYE------EYERKLKD---EEERKAEEELERQFQKMMQESIDARKSEK 993
Query: 60 QILKDGDKPQVIPSYVKLPYPHLAKNKKKEEGQFKKFMQLFSQLQVNIPF--------GE 111
+ K VI V + P L K ++ + + +L ++ F
Sbjct: 994 VV---ASKIPVISKPVSVQKPLLLKKSEEPSSSKETYEELSKPKKIAFTFLTKSGKKTQS 1050
Query: 112 ALDQMPVYAKFMKEMLTSRRKPKDDEN 138
+ Q+P KF+ ++L K K + N
Sbjct: 1051 RILQLPTDVKFVSDVLEEEEKLKTERN 1077
>TRT_DROME (P19351) Troponin T, skeletal muscle (Upheld protein)
(Intended thorax protein)
Length = 396
Score = 34.7 bits (78), Expect = 0.17
Identities = 46/184 (25%), Positives = 80/184 (43%), Gaps = 24/184 (13%)
Query: 5 KDVEVKEVVEKETEHGEVEKESDQGVVENERKKKKGGEKSEKLIDEDSIL-------RKS 57
K ++ K+ K T E +K + + E ER+ ++ EK ++ I+E ++ R++
Sbjct: 71 KKLKEKQAKRKVTRAEEEQKMAQRKKEEEERRVREAEEKKQREIEEKAMRLEEAEKKRQA 130
Query: 58 KSQILKDGDKPQVIPSYVK-------LPYPHLAKNKKKEEGQFKKFMQLFSQLQ--VNIP 108
Q +KD DK + K L + +NK KE+ + +K + L +++
Sbjct: 131 MLQAMKDKDKKGPNFTIAKKDAGVLGLSSAAMERNKTKEQLEEEKKISLSFRIKPLAIEG 190
Query: 109 FGEA--------LDQMPVYAKFMKEMLTSRRKPKDDENIALSENCSAILQRKLPPKLKDP 160
F EA L ++ V + K L R+K +D + L E L+ K K DP
Sbjct: 191 FAEAKLREKAQELWELIVKLETEKYDLEERQKRQDYDLKELKERQKQQLRHKALKKGLDP 250
Query: 161 GAFT 164
A T
Sbjct: 251 EALT 254
Score = 30.8 bits (68), Expect = 2.4
Identities = 17/51 (33%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 1 MEVDKDVEVKEVVEKETEHGEVEKESDQGVVENERKKKKGGEKSEKLIDED 51
+E D++VE EVVE+E E E ++E ++ E E ++++ E+ E+ +E+
Sbjct: 345 VEDDEEVEE-EVVEEEDEEDEEDEEEEEEEEEEEEEEEEEEEEEEEEEEEE 394
>LON1_ARATH (O64948) Lon protease homolog 1, mitochondrial precursor
(EC 3.4.21.-)
Length = 888
Score = 34.7 bits (78), Expect = 0.17
Identities = 35/178 (19%), Positives = 80/178 (44%), Gaps = 18/178 (10%)
Query: 3 VDKDVEVKEVVEKETE--HGEVEKESDQGVVENERK--KKKGGEKSEKLIDEDSILRKSK 58
VD+ ++ V EK T+ G++ K + ++ + + K++ G+ + DED + +
Sbjct: 251 VDRHLQSIRVAEKITQKVEGQLSKSQKEYLLRQQMRAIKEELGDNDD---DEDDVAALER 307
Query: 59 SQILKDGDKPQVIPSYVKLPYPHLAKNKKKEEGQFKKFMQLFSQLQVNIPFGEALDQMPV 118
++ P I + + L K + ++ G +++ +L ++P+ +A ++ +
Sbjct: 308 K--MQAAGMPSNIWKHAQRELRRLKKMQPQQPGYNSS--RVYLELLADLPWDKASEEHEL 363
Query: 119 YAKFMKEMLTSRRKPKDDENIALSENCSAILQRKLPPKLKDPGAFTIPCSIGPVDIGR 176
K KE L D ++ L++ I++ KLK + C +GP +G+
Sbjct: 364 DLKAAKERL-------DSDHYGLAKVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGK 414
>DD21_HUMAN (Q9NR30) Nucleolar RNA helicase II (Nucleolar RNA
helicase Gu) (RH II/Gu) (DEAD-box protein 21)
Length = 783
Score = 34.7 bits (78), Expect = 0.17
Identities = 27/108 (25%), Positives = 49/108 (45%), Gaps = 10/108 (9%)
Query: 30 VVENERKKKKGGEKSEKLIDEDSILRKSKSQILKDGDKPQVIPSYVKLPYPHLAKNKKKE 89
+ E E+K+K +K+E++ +E+ + Q+ K + PS V + P K KKKE
Sbjct: 27 IEEKEKKEKPKSDKTEEIAEEEETVFPKAKQVKKKAE-----PSEVDMNSPKSKKAKKKE 81
Query: 90 EGQFKKFMQLFSQLQVNIPFGEALDQMPVYAKFMKEMLTSRRKPKDDE 137
E L+ E +++ V +K K +T +P ++E
Sbjct: 82 EPSQNDISPKTKSLRKK---KEPIEKKVVSSKTKK--VTKNEEPSEEE 124
>LON1_SPIOL (O04979) Lon protease homolog 1, mitochondrial precursor
(EC 3.4.21.-)
Length = 875
Score = 34.3 bits (77), Expect = 0.22
Identities = 39/188 (20%), Positives = 83/188 (43%), Gaps = 20/188 (10%)
Query: 3 VDKDVEVKEVVEKETE--HGEVEKESDQGVVENERK--KKKGGEKSEKLIDEDSILRKSK 58
VD+ ++ V EK T+ G++ K + ++ + + K++ G+ + DED + +
Sbjct: 252 VDRHLQSIRVAEKITQKVEGQLSKSQREFLLRQQMRAIKEELGDNDD---DEDDVAVLER 308
Query: 59 SQILKDGDKPQVIPSYVKLPYPHLAKNKKKEEGQFKKFMQLFSQLQVNIPFGEALDQMPV 118
++ P I + + L K + ++ G +++ +L ++P+ A ++ +
Sbjct: 309 K--MQSAGMPANIWKHAQRELRRLKKMQPQQPGYSSS--RVYLELLADLPWQNATEEQKL 364
Query: 119 YAKFMKEMLTSRRKPKDDENIALSENCSAILQRKLPPKLKDPGAFTIPCSIGPVDIGRAL 178
+ KE L D ++ L + I++ KLK I C +GP +G+
Sbjct: 365 DLRAAKERL-------DSDHYGLVKVKQRIIEYLAVRKLKPDARGPILCFVGPPGVGKT- 416
Query: 179 CDLGASIN 186
L ASI+
Sbjct: 417 -SLAASIS 423
>HS9A_PIG (O02705) Heat shock protein HSP 90-alpha (HSP 86)
Length = 732
Score = 34.3 bits (77), Expect = 0.22
Identities = 24/62 (38%), Positives = 29/62 (46%), Gaps = 10/62 (16%)
Query: 2 EVDKDVEVKEVVEKETEHGEVEKE----------SDQGVVENERKKKKGGEKSEKLIDED 51
E DK+V E EKE + E EKE D G E E +KK G +K +K I E
Sbjct: 224 ERDKEVSDDEAEEKEDKEEEKEKEEKESEDKPEIEDVGSDEEEEEKKDGDKKKKKKIKEK 283
Query: 52 SI 53
I
Sbjct: 284 YI 285
>HS9A_MOUSE (P07901) Heat shock protein HSP 90-alpha (HSP 86) (Tumor
specific transplantation 86 kDa antigen) (TSTA)
Length = 732
Score = 34.3 bits (77), Expect = 0.22
Identities = 24/62 (38%), Positives = 29/62 (46%), Gaps = 10/62 (16%)
Query: 2 EVDKDVEVKEVVEKETEHGEVEKE----------SDQGVVENERKKKKGGEKSEKLIDED 51
E DK+V E EKE + E EKE D G E E +KK G +K +K I E
Sbjct: 224 ERDKEVSDDEAEEKEEKEEEKEKEEKESDDKPEIEDVGSDEEEEEKKDGDKKKKKKIKEK 283
Query: 52 SI 53
I
Sbjct: 284 YI 285
>HS9A_HORSE (Q9GKX7) Heat shock protein HSP 90-alpha (HSP 86)
(Fragment)
Length = 719
Score = 34.3 bits (77), Expect = 0.22
Identities = 24/62 (38%), Positives = 29/62 (46%), Gaps = 10/62 (16%)
Query: 2 EVDKDVEVKEVVEKETEHGEVEKE----------SDQGVVENERKKKKGGEKSEKLIDED 51
E DK+V E EKE + E EKE D G E E +KK G +K +K I E
Sbjct: 214 ERDKEVSDDEAEEKEDKEEEKEKEEKESDDKPEIEDVGSDEEEEEKKDGDKKKKKKIKEK 273
Query: 52 SI 53
I
Sbjct: 274 YI 275
>Y6G2_ENCCU (Q8SV63) Hypothetical protein ECU06_1620
Length = 579
Score = 33.9 bits (76), Expect = 0.29
Identities = 24/71 (33%), Positives = 33/71 (45%), Gaps = 8/71 (11%)
Query: 5 KDVEVKEVVEKETEHGEVEKESDQ--------GVVENERKKKKGGEKSEKLIDEDSILRK 56
K V V EV E+E+E EVE + G KK +GG K K+ S RK
Sbjct: 337 KSVNVSEVKEEESETEEVEAGEEAEMPSMEIGGARRKTGKKSRGGRKRYKIHKRVSRWRK 396
Query: 57 SKSQILKDGDK 67
S +I ++ D+
Sbjct: 397 SPEKIKEEWDR 407
>DYHC_PARTE (Q27171) Dynein heavy chain, cytosolic (DYHC)
Length = 4540
Score = 33.9 bits (76), Expect = 0.29
Identities = 20/65 (30%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 6 DVEVKEVVEKETEHGEVEKESDQGVVENERKKKKGGEKSEKLIDEDSILRKSK---SQIL 62
+V + ++ E E + E++K DQ VE K+++ GEK + +I+E I K K +++
Sbjct: 3090 NVGLDKLKETEQQVLEMQKSLDQKKVELLTKERQAGEKLQTIIEEKKIAEKKKEDSTRLS 3149
Query: 63 KDGDK 67
D +K
Sbjct: 3150 SDAEK 3154
>DP2S_METJA (Q58113) DNA polymerase II small subunit (EC 2.7.7.7)
(Pol II)
Length = 594
Score = 33.9 bits (76), Expect = 0.29
Identities = 27/93 (29%), Positives = 46/93 (49%), Gaps = 9/93 (9%)
Query: 2 EVDKDVEVKEVVEKETEHGEVEKESDQGVVENERKKKKGGEKSEKLIDEDSILRKSKSQI 61
E +K EVK+ ++KETE ++EKE + V KK+ E+ K DED + + Q+
Sbjct: 84 EKEKPKEVKKEIKKETEE-KIEKEKIEFV------KKEEKEQFIKKSDED--VEEKLKQL 134
Query: 62 LKDGDKPQVIPSYVKLPYPHLAKNKKKEEGQFK 94
+ +K + + Y H+ K K+ + K
Sbjct: 135 ISKEEKKEDFDAERAKRYEHITKIKESVNSRIK 167
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.313 0.134 0.369
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,348,213
Number of Sequences: 164201
Number of extensions: 1122674
Number of successful extensions: 5269
Number of sequences better than 10.0: 182
Number of HSP's better than 10.0 without gapping: 59
Number of HSP's successfully gapped in prelim test: 128
Number of HSP's that attempted gapping in prelim test: 4537
Number of HSP's gapped (non-prelim): 548
length of query: 211
length of database: 59,974,054
effective HSP length: 105
effective length of query: 106
effective length of database: 42,732,949
effective search space: 4529692594
effective search space used: 4529692594
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 63 (28.9 bits)
Medicago: description of AC124970.11