BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC124967.4 - phase: 0 /pseudo
(335 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
PME_BRANA (P41510) Probable pectinesterase precursor (EC 3.1.1.1... 114 3e-25
PME_BRACM (Q42608) Pectinesterase (EC 3.1.1.11) (Pectin methyles... 113 6e-25
PME2_ARATH (Q42534) Pectinesterase 2 precursor (EC 3.1.1.11) (Pe... 106 7e-23
PME_MEDSA (Q42920) Pectinesterase precursor (EC 3.1.1.11) (Pecti... 104 3e-22
PME3_CITSI (P83948) Pectinesterase 3 precursor (EC 3.1.1.11) (Pe... 104 4e-22
PME_PETIN (Q43043) Pectinesterase precursor (EC 3.1.1.11) (Pecti... 103 5e-22
PME_DAUCA (P83218) Pectinesterase (EC 3.1.1.11) (Pectin methyles... 103 8e-22
PME3_PHAVU (Q43111) Pectinesterase 3 precursor (EC 3.1.1.11) (Pe... 103 8e-22
PME1_CITSI (O04886) Pectinesterase 1 precursor (EC 3.1.1.11) (Pe... 102 1e-21
PME1_ARATH (Q43867) Pectinesterase 1 precursor (EC 3.1.1.11) (Pe... 102 2e-21
PMEU_LYCES (Q43143) Pectinesterase U1 precursor (EC 3.1.1.11) (P... 101 3e-21
PME_PRUPE (Q43062) Pectinesterase PPE8B precursor (EC 3.1.1.11) ... 100 7e-21
PME1_FICAW (P83947) Pectinesterase precursor (EC 3.1.1.11) (Pect... 98 3e-20
PME3_LYCES (Q96576) Pectinesterase 3 precursor (EC 3.1.1.11) (Pe... 94 4e-19
PME2_CITSI (O04887) Pectinesterase 2 precursor (EC 3.1.1.11) (Pe... 88 3e-17
PM21_LYCES (P09607) Pectinesterase 2 precursor (EC 3.1.1.11) (Pe... 86 1e-16
PMEA_ERWCH (P07863) Pectinesterase A precursor (EC 3.1.1.11) (Pe... 86 2e-16
PME1_LYCES (P14280) Pectinesterase 1 precursor (EC 3.1.1.11) (Pe... 86 2e-16
PM22_LYCES (Q96575) Pectinesterase 2 precursor (EC 3.1.1.11) (Pe... 86 2e-16
PME1_RALSO (P58601) Pectinesterase precursor (EC 3.1.1.11) (Pect... 72 1e-12
>PME_BRANA (P41510) Probable pectinesterase precursor (EC 3.1.1.11)
(Pectin methylesterase) (PE)
Length = 584
Score = 114 bits (285), Expect = 3e-25
Identities = 67/197 (34%), Positives = 113/197 (57%), Gaps = 16/197 (8%)
Query: 56 VRKDGTGDFTTVTDAVKSIPSGNKRRVVVWIGMGEYREKITVDRSKRFVTFYGERNGKDN 115
V KDG+G F T+++AVK+ P N R +++I G Y+E++T+ + V +G D
Sbjct: 275 VAKDGSGQFKTISEAVKACPEKNPGRCIIYIKAGVYKEQVTIPKKVNNVFMFG-----DG 329
Query: 116 DMMPIITYD-ATALRYGTLDS--ATVAVDADYFVAVNVAFVNSSPMPDENSVGGQALAMR 172
IIT+D + L GT S TV V+++ F+A + F N++ +G QA+A R
Sbjct: 330 ATQTIITFDRSVGLSPGTTTSLSGTVQVESEGFMAKWIGFQNTA-----GPLGHQAVAFR 384
Query: 173 ISGDKAAFYNCKFIGFQDTLCDDYGKHFFKDCFIQGTYDFIFGNGKSIYLRTTIESVAKG 232
++GD+A +NC+F G+QDTL + G+ F+++ + GT DFIFG ++ ++ ++ KG
Sbjct: 385 VNGDRAVIFNCRFDGYQDTLYVNNGRQFYRNIVVSGTVDFIFGKSATV-IQNSLILCRKG 443
Query: 233 F--ECHHSTR*GKNVGR 247
+ +H T G G+
Sbjct: 444 SPGQTNHVTADGNEKGK 460
>PME_BRACM (Q42608) Pectinesterase (EC 3.1.1.11) (Pectin
methylesterase) (PE) (Fragment)
Length = 571
Score = 113 bits (283), Expect = 6e-25
Identities = 70/198 (35%), Positives = 114/198 (57%), Gaps = 18/198 (9%)
Query: 56 VRKDGTGDFTTVTDAVKSIPSGNKRRVVVWIGMGEYREKITVDRSKRFVTFYGERNGKDN 115
V KDG+G F T+++AVK+ P N R +++I G Y+E++T+ + V +G D
Sbjct: 262 VAKDGSGQFKTISEAVKACPEKNPGRCIIYIKAGVYKEQVTIPKKVNNVFMFG-----DG 316
Query: 116 DMMPIITYD-ATALRYGTLDS--ATVAVDADYFVAVNVAFVNSSPMPDENSVGGQALAMR 172
IIT+D + L GT S TV V+++ F+A + F N++ +G QA+A R
Sbjct: 317 ATQTIITFDRSVGLSPGTTTSLSGTVQVESEGFMAKWIGFQNTA-----GPLGNQAVAFR 371
Query: 173 ISGDKAAFYNCKFIGFQDTLCDDYGKHFFKDCFIQGTYDFIFGNGKS-IYLRTTIESVAK 231
++GD+A +NC+F G+QDTL + G+ F+++ + GT DFI NGKS ++ ++ K
Sbjct: 372 VNGDRAVIFNCRFDGYQDTLYVNNGRQFYRNIVVSGTVDFI--NGKSATVIQNSLILCRK 429
Query: 232 GF--ECHHSTR*GKNVGR 247
G + +H T GK G+
Sbjct: 430 GSPGQTNHVTADGKQKGK 447
>PME2_ARATH (Q42534) Pectinesterase 2 precursor (EC 3.1.1.11)
(Pectin methylesterase 2) (PE 2)
Length = 587
Score = 106 bits (265), Expect = 7e-23
Identities = 70/201 (34%), Positives = 101/201 (49%), Gaps = 11/201 (5%)
Query: 21 LLPVTPTLSEFNRHREITLLEEHLTAAETTVRVVRVRKDGTGDFTTVTDAVKSIPSGNKR 80
L VT L + +++ + L T V DG+GDFTTV AV + P + +
Sbjct: 244 LKEVTGDLDSDGWPKWLSVGDRRLLQGSTIKADATVADDGSGDFTTVAAAVAAAPEKSNK 303
Query: 81 RVVVWIGMGEYREKITVDRSKRFVTFYGERNGKDNDMMPIITYDATALRYGT-LDSATVA 139
R V+ I G YRE + V + K + F G+ GK IIT + T SATVA
Sbjct: 304 RFVIHIKAGVYRENVEVTKKKTNIMFLGDGRGKT-----IITGSRNVVDGSTTFHSATVA 358
Query: 140 VDADYFVAVNVAFVNSSPMPDENSVGGQALAMRISGDKAAFYNCKFIGFQDTLCDDYGKH 199
+ F+A ++ F N++ P ++ QA+A+R+ D +AFY C +QDTL +
Sbjct: 359 AVGERFLARDITFQNTAG-PSKH----QAVALRVGSDFSAFYQCDMFAYQDTLYVHSNRQ 413
Query: 200 FFKDCFIQGTYDFIFGNGKSI 220
FF C I GT DFIFGN ++
Sbjct: 414 FFVKCHITGTVDFIFGNAAAV 434
>PME_MEDSA (Q42920) Pectinesterase precursor (EC 3.1.1.11) (Pectin
methylesterase) (PE) (P65)
Length = 447
Score = 104 bits (260), Expect = 3e-22
Identities = 62/186 (33%), Positives = 98/186 (52%), Gaps = 19/186 (10%)
Query: 56 VRKDGTGDFTTVTDAVKSIPSGNKRRVVVWIGMGEYREKITVDRSKRFVTFYGERNGKDN 115
V +DG+G F T+TDA+K++P N V+ + G Y+E + V + +VT G+
Sbjct: 134 VAQDGSGQFKTLTDALKTVPPKNAVPFVIHVKAGVYKETVNVAKEMNYVTVIGDG----- 188
Query: 116 DMMPIITYDATALRYG----TLDSATVAVDADYFVAVNVAFVNSSPMPDENSVGGQALAM 171
P T +L Y T ++AT V+ F+A ++ F N++ QA+A+
Sbjct: 189 ---PTKTKFTGSLNYADGINTYNTATFGVNGANFMAKDIGFENTAGTGKH-----QAVAL 240
Query: 172 RISGDKAAFYNCKFIGFQDTLCDDYGKHFFKDCFIQGTYDFIFGNGKSIY--LRTTIESV 229
R++ D+A FYNC+ GFQDTL + F++DC I GT DF+FG ++ +
Sbjct: 241 RVTADQAIFYNCQMDGFQDTLYVQSQRQFYRDCSISGTIDFVFGERFGVFQNCKLVCRLP 300
Query: 230 AKGFEC 235
AKG +C
Sbjct: 301 AKGQQC 306
>PME3_CITSI (P83948) Pectinesterase 3 precursor (EC 3.1.1.11)
(Pectin methylesterase 3) (PE 3)
Length = 584
Score = 104 bits (259), Expect = 4e-22
Identities = 65/178 (36%), Positives = 97/178 (53%), Gaps = 12/178 (6%)
Query: 44 LTAAETTVRVVRVRKDGTGDFTTVTDAVKSIPSGNKRRVVVWIGMGEYREKITVDRSKRF 103
L ++ T VV V DG+G+F TV +V + P G +R ++ I G YRE + V + +
Sbjct: 265 LQSSSVTPNVV-VAADGSGNFKTVAASVAAAPQGGTKRYIIRIKAGVYRENVEVTKKHKN 323
Query: 104 VTFYGERNGKDNDMMPIITYDATALRYGT-LDSATVAVDADYFVAVNVAFVNSSPMPDEN 162
+ F G D IIT + T SATVAV + F+A ++ F N++ P ++
Sbjct: 324 IMFIG-----DGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAG-PSKH 377
Query: 163 SVGGQALAMRISGDKAAFYNCKFIGFQDTLCDDYGKHFFKDCFIQGTYDFIFGNGKSI 220
QA+A+R+ D +AFYNC + +QDTL + FF +C I GT DFIFGN ++
Sbjct: 378 ----QAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAV 431
>PME_PETIN (Q43043) Pectinesterase precursor (EC 3.1.1.11) (Pectin
methylesterase) (PE)
Length = 374
Score = 103 bits (258), Expect = 5e-22
Identities = 59/165 (35%), Positives = 89/165 (53%), Gaps = 9/165 (5%)
Query: 56 VRKDGTGDFTTVTDAVKSIPSGNKRRVVVWIGMGEYREKITVDRSKRFVTFYGERNGKDN 115
V DG+G + T+ +A+ ++P N +++I G Y+E I + +S V GE K
Sbjct: 61 VALDGSGQYKTIKEALDAVPKKNTEPFIIFIKAGVYKEYIDIPKSMTNVVLIGEGPTKTK 120
Query: 116 DMMPIITYDATALRYGTLDSATVAVDADYFVAVNVAFVNSSPMPDENSVGGQALAMRISG 175
D + T + TV V+ FVA N+ F N++ E QA+A+R+S
Sbjct: 121 ITGNKSVKDGPS----TFHTTTVGVNGANFVAKNIGFENTAGPEKE-----QAVALRVSA 171
Query: 176 DKAAFYNCKFIGFQDTLCDDYGKHFFKDCFIQGTYDFIFGNGKSI 220
DKA YNC+ G+QDTL + F++DC I GT DFIFGNG+++
Sbjct: 172 DKAIIYNCQIDGYQDTLYVHTYRQFYRDCTITGTVDFIFGNGEAV 216
>PME_DAUCA (P83218) Pectinesterase (EC 3.1.1.11) (Pectin
methylesterase) (PE)
Length = 319
Score = 103 bits (256), Expect = 8e-22
Identities = 63/171 (36%), Positives = 91/171 (52%), Gaps = 11/171 (6%)
Query: 47 AETTVRVVRVRKDGTGDFTTVTDAVKSIPSGNKRRVVVWIGMGEYREKITVDRSKRFVTF 106
+ T V V DG+GD+ TV++AV + P +K R V+ I G YRE + V + K+ + F
Sbjct: 2 SSTVTPNVVVAADGSGDYKTVSEAVAAAPEDSKTRYVIRIKAGVYRENVDVPKKKKNIMF 61
Query: 107 YGERNGKDNDMMPIITYDATALRYGT-LDSATVAVDADYFVAVNVAFVNSSPMPDENSVG 165
G D IIT T +SATVA F+A ++ F N++ +
Sbjct: 62 LG-----DGRTSTIITASKNVQDGSTTFNSATVAAVGAGFLARDITFQNTA-----GAAK 111
Query: 166 GQALAMRISGDKAAFYNCKFIGFQDTLCDDYGKHFFKDCFIQGTYDFIFGN 216
QA+A+R+ D +AFY C + +QD+L + FF +CFI GT DFIFGN
Sbjct: 112 HQAVALRVGSDLSAFYRCDILAYQDSLYVHSNRQFFINCFIAGTVDFIFGN 162
>PME3_PHAVU (Q43111) Pectinesterase 3 precursor (EC 3.1.1.11)
(Pectin methylesterase 3) (PE 3)
Length = 581
Score = 103 bits (256), Expect = 8e-22
Identities = 65/197 (32%), Positives = 99/197 (49%), Gaps = 18/197 (9%)
Query: 34 HREITLLEEHLTAAETTVRVVR---------VRKDGTGDFTTVTDAVKSIPSGNKRRVVV 84
HR + E L AAE + + V KDG+G F T+ +A+K + ++ R V
Sbjct: 245 HRRLLGFPEWLGAAERRLLEEKNNDSTPDAVVAKDGSGQFKTIGEALKLVKKKSEERFSV 304
Query: 85 WIGMGEYREKITVDRSKRFVTFYGERNGKDNDMMPIITYDATALRYGTLDSATVAVDADY 144
++ G Y E I +D++ V YG+ K + D T T ++AT AV
Sbjct: 305 YVKEGRYVENIDLDKNTWNVMIYGDGKDKTFVVGSRNFMDGTP----TFETATFAVKGKG 360
Query: 145 FVAVNVAFVNSSPMPDENSVGGQALAMRISGDKAAFYNCKFIGFQDTLCDDYGKHFFKDC 204
F+A ++ FVN++ QA+A+R D++ F+ C F GFQDTL + F++DC
Sbjct: 361 FIAKDIGFVNNAGASKH-----QAVALRSGSDRSVFFRCSFDGFQDTLYAHSNRQFYRDC 415
Query: 205 FIQGTYDFIFGNGKSIY 221
I GT DFIFGN ++
Sbjct: 416 DITGTIDFIFGNAAVVF 432
>PME1_CITSI (O04886) Pectinesterase 1 precursor (EC 3.1.1.11)
(Pectin methylesterase) (PE)
Length = 584
Score = 102 bits (254), Expect = 1e-21
Identities = 61/166 (36%), Positives = 90/166 (53%), Gaps = 11/166 (6%)
Query: 56 VRKDGTGDFTTVTDAVKSIPSGNKRRVVVWIGMGEYREKITVDRSKRFVTFYGERNGKDN 115
V DG+G+F TV AV + P G +R ++ I G YRE + V + + + F G D
Sbjct: 276 VAADGSGNFKTVAAAVAAAPQGGTKRYIIRIKAGVYRENVEVTKKHKNIMFIG-----DG 330
Query: 116 DMMPIITYDATALRYGT-LDSATVAVDADYFVAVNVAFVNSSPMPDENSVGGQALAMRIS 174
IIT + T SAT AV + F+A ++ F N++ P ++ QA+A+R+
Sbjct: 331 RTRTIITGSRNVVDGSTTFKSATAAVVGEGFLARDITFQNTAG-PSKH----QAVALRVG 385
Query: 175 GDKAAFYNCKFIGFQDTLCDDYGKHFFKDCFIQGTYDFIFGNGKSI 220
D +AFYNC + +QDTL + FF +C I GT DFIFGN ++
Sbjct: 386 ADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAV 431
>PME1_ARATH (Q43867) Pectinesterase 1 precursor (EC 3.1.1.11)
(Pectin methylesterase 1) (PE 1)
Length = 586
Score = 102 bits (253), Expect = 2e-21
Identities = 56/168 (33%), Positives = 87/168 (51%), Gaps = 9/168 (5%)
Query: 54 VRVRKDGTGDFTTVTDAVKSIPSGNKRRVVVWIGMGEYREKITVDRSKRFVTFYGERNGK 113
V V DGTGD TV +AV +P + + V+++ G Y E + +D+SK V YG+ GK
Sbjct: 281 VTVAGDGTGDVLTVNEAVAKVPKKSLKMFVIYVKSGTYVENVVMDKSKWNVMIYGDGKGK 340
Query: 114 DNDMMPIITYDATALRYGTLDSATVAVDADYFVAVNVAFVNSSPMPDENSVGGQALAMRI 173
D T T ++AT A+ F+ ++ +N++ + QA+A R
Sbjct: 341 TIISGSKNFVDGTP----TYETATFAIQGKGFIMKDIGIINTA-----GAAKHQAVAFRS 391
Query: 174 SGDKAAFYNCKFIGFQDTLCDDYGKHFFKDCFIQGTYDFIFGNGKSIY 221
D + +Y C F GFQDTL + F++DC + GT DFIFG+ ++
Sbjct: 392 GSDFSVYYQCSFDGFQDTLYPHSNRQFYRDCDVTGTIDFIFGSAAVVF 439
>PMEU_LYCES (Q43143) Pectinesterase U1 precursor (EC 3.1.1.11)
(Pectin methylesterase) (PE)
Length = 583
Score = 101 bits (251), Expect = 3e-21
Identities = 63/182 (34%), Positives = 93/182 (50%), Gaps = 11/182 (6%)
Query: 41 EEHLTAAETTVRVVRVRKDGTGDFTTVTDAVKSIPSGNKRRVVVWIGMGEYREKITVDRS 100
+ L + T V V DG+GD+ TV++AV+ P + +R V+ I G YRE + V +
Sbjct: 260 DRRLLQSSTVTPDVVVAADGSGDYKTVSEAVRKAPEKSSKRYVIRIKAGVYRENVDVPKK 319
Query: 101 KRFVTFYGERNGKDNDMMPIITYDATALRYGT-LDSATVAVDADYFVAVNVAFVNSSPMP 159
K + F G+ GK N IIT T SATV A +A ++ F N++
Sbjct: 320 KTNIMFMGD--GKSNT---IITASRNVQDGSTTFHSATVVRVAGKVLARDITFQNTAGAS 374
Query: 160 DENSVGGQALAMRISGDKAAFYNCKFIGFQDTLCDDYGKHFFKDCFIQGTYDFIFGNGKS 219
QA+A+ + D +AFY C + +QDTL + FF C + GT DFIFGNG +
Sbjct: 375 KH-----QAVALCVGSDLSAFYRCDMLAYQDTLYVHSNRQFFVQCLVAGTVDFIFGNGAA 429
Query: 220 IY 221
++
Sbjct: 430 VF 431
>PME_PRUPE (Q43062) Pectinesterase PPE8B precursor (EC 3.1.1.11)
(Pectin methylesterase) (PE)
Length = 522
Score = 100 bits (248), Expect = 7e-21
Identities = 61/167 (36%), Positives = 96/167 (56%), Gaps = 11/167 (6%)
Query: 56 VRKDGTGDFTTVTDAVKSIPSGNKRRVVVWIGMGEYREKITVDRSKRFVTFYGERNGKDN 115
V +DGTG+FT VTDAV + P + RR V++I G Y+E + + + K + G+ G D
Sbjct: 211 VAQDGTGNFTNVTDAVLAAPDYSMRRYVIYIKRGTYKENVEIKKKKWNLMMIGD--GMD- 267
Query: 116 DMMPIITYDATALR-YGTLDSATVAVDADYFVAVNVAFVNSSPMPDENSVGGQALAMRIS 174
II+ + + + + T SAT AV F+A ++ F N++ P+++ QA+A+R
Sbjct: 268 --ATIISGNRSFVDGWTTFRSATFAVSGRGFIARDITFENTAG-PEKH----QAVALRSD 320
Query: 175 GDKAAFYNCKFIGFQDTLCDDYGKHFFKDCFIQGTYDFIFGNGKSIY 221
D + FY C G+QDTL + F++DC I GT DFIFG+ ++
Sbjct: 321 SDLSVFYRCNIRGYQDTLYTHTMRQFYRDCKISGTVDFIFGDATVVF 367
>PME1_FICAW (P83947) Pectinesterase precursor (EC 3.1.1.11) (Pectin
methylesterase) (PE)
Length = 545
Score = 97.8 bits (242), Expect = 3e-20
Identities = 62/167 (37%), Positives = 91/167 (54%), Gaps = 11/167 (6%)
Query: 56 VRKDGTGDFTTVTDAVKSIPSGNKRRVVVWIGMGEYREKITVDRSKRFVTFYGERNGKDN 115
V KDG+GD+ T+ +AV +IP +K+RV+V + G Y E + K+ V GE G D
Sbjct: 235 VAKDGSGDYETLNEAVAAIPDNSKKRVIVLVRTGIYEENVDFGYQKKNVMLVGE--GMD- 291
Query: 116 DMMPIITYDATALRYGT-LDSATVAVDADYFVAVNVAFVNSSPMPDENSVGGQALAMRIS 174
IIT + T DSATVA D F+A ++ F N++ P++ QA+A+RI
Sbjct: 292 --YTIITGSRNVVDGSTTFDSATVAAVGDGFIAQDICFQNTAG-PEKY----QAVALRIG 344
Query: 175 GDKAAFYNCKFIGFQDTLCDDYGKHFFKDCFIQGTYDFIFGNGKSIY 221
D+ C+ +QDTL + F++D I GT DFIFGN ++
Sbjct: 345 ADETVINRCRIDAYQDTLYPHNYRQFYRDRNITGTVDFIFGNAAVVF 391
>PME3_LYCES (Q96576) Pectinesterase 3 precursor (EC 3.1.1.11)
(Pectin methylesterase 3) (PE 3)
Length = 544
Score = 94.4 bits (233), Expect = 4e-19
Identities = 53/171 (30%), Positives = 89/171 (51%), Gaps = 10/171 (5%)
Query: 56 VRKDGTGDFTTVTDAVKSIPSGNKRRVVVWIGMGEYREKITVDRSKRFVTFYGERNGKDN 115
V +DGTGD+ T+ +AV + P NK R V+++ MG Y+E + V + K + G D
Sbjct: 235 VAQDGTGDYQTLAEAVAAAPDKNKTRYVIYVKMGIYKENVVVTKKKMNLMIVG-----DG 289
Query: 116 DMMPIITYDATALRYGTLDSATVAVDADYFVAVNVAFVNSSPMPDENSVGGQALAMRISG 175
IIT + T S T+A F+ ++ N++ P+++ QA+A+R+
Sbjct: 290 MNATIITGSLNVVDGSTFPSNTLAAVGQGFILQDICIQNTAG-PEKD----QAVALRVGA 344
Query: 176 DKAAFYNCKFIGFQDTLCDDYGKHFFKDCFIQGTYDFIFGNGKSIYLRTTI 226
D + C+ +QDTL + F++D ++ GT DFIFGN ++ + I
Sbjct: 345 DMSVINRCRIDAYQDTLYAHSQRQFYRDSYVTGTVDFIFGNAAVVFQKCQI 395
>PME2_CITSI (O04887) Pectinesterase 2 precursor (EC 3.1.1.11)
(Pectin methylesterase) (PE)
Length = 510
Score = 88.2 bits (217), Expect = 3e-17
Identities = 63/172 (36%), Positives = 93/172 (53%), Gaps = 16/172 (9%)
Query: 48 ETTVRV-VRVRKDGTGDFTTVTDAVKSIPSGNKRRVVVWIGMGEYREKITVDRSKRFVTF 106
+TT R + V +DG+G+ T+ +AV + R V++I G Y E I V + F
Sbjct: 196 QTTPRANIVVAQDGSGNVKTIQEAVAAASRAGGSRYVIYIKAGTYNENIEVKLKN--IMF 253
Query: 107 YGERNGKDNDMMPIITYDATALRYG--TLDSATVAVDADYFVAVNVAFVNSSPMPDENSV 164
G+ GK IIT + ++ G T SATVAV D F+A ++ N++ P+ +
Sbjct: 254 VGDGIGKT-----IIT-GSKSVGGGATTFKSATVAVVGDNFIARDITIRNTAG-PNNH-- 304
Query: 165 GGQALAMRISGDKAAFYNCKFIGFQDTLCDDYGKHFFKDCFIQGTYDFIFGN 216
QA+A+R D + FY C F G+QDTL + F+++C I GT DFIFGN
Sbjct: 305 --QAVALRSGSDLSVFYRCSFEGYQDTLYVHSQRQFYRECDIYGTVDFIFGN 354
>PM21_LYCES (P09607) Pectinesterase 2 precursor (EC 3.1.1.11)
(Pectin methylesterase 2) (PE 2)
Length = 550
Score = 86.3 bits (212), Expect = 1e-16
Identities = 51/167 (30%), Positives = 82/167 (48%), Gaps = 11/167 (6%)
Query: 56 VRKDGTGDFTTVTDAVKSIPSGNKRRVVVWIGMGEYREKITVDRSKRFVTFYGERNGKDN 115
V KDGTG + T+ +AV + P +K R V+++ G Y+E + V K + G D
Sbjct: 240 VAKDGTGKYRTLAEAVAAAPDKSKTRYVIYVKRGTYKENVEVSSRKMNLMIIG-----DG 294
Query: 116 DMMPIITYDATALRYGT-LDSATVAVDADYFVAVNVAFVNSSPMPDENSVGGQALAMRIS 174
IIT + T SAT+A F+ ++ N++ QA+A+R+
Sbjct: 295 MYATIITGSLNVVDGSTTFHSATLAAVGKGFILQDICIQNTA-----GPAKHQAVALRVG 349
Query: 175 GDKAAFYNCKFIGFQDTLCDDYGKHFFKDCFIQGTYDFIFGNGKSIY 221
DK+ C+ +QDTL + F++D ++ GT DFIFGN ++
Sbjct: 350 ADKSVINRCRIDAYQDTLYAHSQRQFYRDSYVTGTIDFIFGNAAVVF 396
>PMEA_ERWCH (P07863) Pectinesterase A precursor (EC 3.1.1.11)
(Pectin methylesterase A) (PE A)
Length = 366
Score = 85.5 bits (210), Expect = 2e-16
Identities = 57/191 (29%), Positives = 90/191 (46%), Gaps = 13/191 (6%)
Query: 43 HLTAAETTVRVVRVRKDGTGD-FTTVTDAVKSIPSGNKRRVVVWIGMGEYREKITVDRSK 101
H A TT V + G F T+ DA+ S P+G+ V++ I G Y E++T+ R+
Sbjct: 20 HQAQAATTYNAVVSKSSSDGKTFKTIADAIASAPAGSTPFVIL-IKNGVYNERLTITRNN 78
Query: 102 RFVTFYGERNGKDNDMMPIITYDATALRYGTLDSATVAVDADYFVAVNVAFVNSSPMPDE 161
+ T + ++GT S+T+ + A F A ++ N P
Sbjct: 79 LLLKGESRNGAVIAAATAAGTLKSDGSKWGTAGSSTITISAKDFSAQSLTIRNDFDFPAN 138
Query: 162 NSVGG---------QALAMRI--SGDKAAFYNCKFIGFQDTLCDDYGKHFFKDCFIQGTY 210
+ QA+A+ + SGD+A F + +G+QDTL G+ FF DC I GT
Sbjct: 139 QAKSDSDSSKIKDTQAVALYVTKSGDRAYFKDVSLVGYQDTLYVSGGRSFFSDCRISGTV 198
Query: 211 DFIFGNGKSIY 221
DFIFG+G +++
Sbjct: 199 DFIFGDGTALF 209
>PME1_LYCES (P14280) Pectinesterase 1 precursor (EC 3.1.1.11)
(Pectin methylesterase 1) (PE 1)
Length = 546
Score = 85.5 bits (210), Expect = 2e-16
Identities = 49/167 (29%), Positives = 84/167 (49%), Gaps = 11/167 (6%)
Query: 56 VRKDGTGDFTTVTDAVKSIPSGNKRRVVVWIGMGEYREKITVDRSKRFVTFYGERNGKDN 115
V +DGTGD+ T+ +AV + P +K R V+++ G Y+E + V +K + G+
Sbjct: 236 VAQDGTGDYQTLAEAVAAAPDKSKTRYVIYVKRGTYKENVEVASNKMNLMIVGDGMYATT 295
Query: 116 DMMPIITYDATALRYGTLDSATVAVDADYFVAVNVAFVNSS-PMPDENSVGGQALAMRIS 174
+ D + T SAT+A F+ ++ N++ P D QA+A+R+
Sbjct: 296 ITGSLNVVDGST----TFRSATLAAVGQGFILQDICIQNTAGPAKD------QAVALRVG 345
Query: 175 GDKAAFYNCKFIGFQDTLCDDYGKHFFKDCFIQGTYDFIFGNGKSIY 221
D + C+ +QDTL + F++D ++ GT DFIFGN ++
Sbjct: 346 ADMSVINRCRIDAYQDTLYAHSQRQFYRDSYVTGTVDFIFGNAAVVF 392
>PM22_LYCES (Q96575) Pectinesterase 2 precursor (EC 3.1.1.11)
(Pectin methylesterase 2) (PE 2)
Length = 550
Score = 85.5 bits (210), Expect = 2e-16
Identities = 51/167 (30%), Positives = 83/167 (49%), Gaps = 11/167 (6%)
Query: 56 VRKDGTGDFTTVTDAVKSIPSGNKRRVVVWIGMGEYREKITVDRSKRFVTFYGERNGKDN 115
V KDGTG + T+ +AV + P +K R V+++ G Y+E + V K + G D
Sbjct: 240 VAKDGTGKYRTLAEAVAAAPDKSKTRYVIYVKRGIYKENVEVSSRKMKLMIVG-----DG 294
Query: 116 DMMPIITYDATALRYGT-LDSATVAVDADYFVAVNVAFVNSSPMPDENSVGGQALAMRIS 174
IIT + + T SAT+A F+ ++ N++ QA+A+R+
Sbjct: 295 MHATIITGNLNVVDGSTTFHSATLAAVGKGFILQDICIQNTA-----GPAKHQAVALRVG 349
Query: 175 GDKAAFYNCKFIGFQDTLCDDYGKHFFKDCFIQGTYDFIFGNGKSIY 221
DK+ C+ +QDTL + F++D ++ GT DFIFGN ++
Sbjct: 350 ADKSVINRCRIDAYQDTLYAHSQRQFYRDSYVTGTIDFIFGNAAVVF 396
>PME1_RALSO (P58601) Pectinesterase precursor (EC 3.1.1.11) (Pectin
methylesterase) (PE)
Length = 396
Score = 72.4 bits (176), Expect = 1e-12
Identities = 61/197 (30%), Positives = 83/197 (41%), Gaps = 22/197 (11%)
Query: 56 VRKDGTGDFTTVTDAVKS-IPSGNKRRVVVWIGMGEYREKITVDRSKRFVTFYGERNGKD 114
V DGT + TV A+ + + +G R + + G Y E + V S +T YG
Sbjct: 82 VAADGTAQYKTVQAAIDAAVNAGGVARRYISVKAGIYNELVCVPESAPPITLYGLDANAG 141
Query: 115 NDMMPIITYDATALR---------------YGTLDSATVAVDADYFVAVNVAFVNSSPMP 159
N + + T GTL SAT V A F A N+ F NS
Sbjct: 142 NTQIVYNNANPTPASGAKTNPCMGTSSNATVGTLRSATAMVRASDFHARNLTFKNSYVEG 201
Query: 160 DENSVGGQALAMRISGDKAAFYNCKFIGFQDTL------CDDYGKHFFKDCFIQGTYDFI 213
A+A+ + GDKA N IG QDTL + +FK+ FIQG DFI
Sbjct: 202 TYADNNQSAVALAVRGDKAILENVSVIGNQDTLFVGATSTTTVIRAYFKNSFIQGDTDFI 261
Query: 214 FGNGKSIYLRTTIESVA 230
FG G +++ TI+ A
Sbjct: 262 FGAGTAVFHGCTIQYTA 278
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.328 0.141 0.457
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 41,021,966
Number of Sequences: 164201
Number of extensions: 1693299
Number of successful extensions: 4336
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 4271
Number of HSP's gapped (non-prelim): 35
length of query: 335
length of database: 59,974,054
effective HSP length: 111
effective length of query: 224
effective length of database: 41,747,743
effective search space: 9351494432
effective search space used: 9351494432
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 66 (30.0 bits)
Medicago: description of AC124967.4