BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC124966.7 + phase: 0 /pseudo
(1084 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
GARP_PLAFF (P13816) Glutamic acid-rich protein precursor 92 1e-17
NSD1_HUMAN (Q96L73) Nuclear receptor binding SET domain containi... 79 9e-14
IE68_SHV21 (Q01042) Immediate-early protein 73 5e-12
RPG1_MOUSE (Q9EPQ2) X-linked retinitis pigmentosa GTPase regulat... 69 9e-11
YCF2_OENVI (P31569) Protein ycf2 (Fragment) 66 4e-10
NAB3_YEAST (P38996) Nuclear polyadenylated RNA-binding protein 3 64 3e-09
YCF2_OENPI (P31568) Protein ycf2 (Fragment) 62 6e-09
VG48_SHV21 (Q01033) Hypothetical gene 48 protein 62 6e-09
MYT1_HUMAN (Q01538) Myelin transcription factor 1 (MYT1) (MYTI) ... 61 2e-08
S521_HUMAN (Q96MU7) Putative splicing factor YT521 60 2e-08
ECX1_METMA (Q8PTT8) Probable exosome complex exonuclease 1 (EC 3... 60 3e-08
GAR2_SCHPO (P41891) Protein gar2 60 4e-08
CENB_CRIGR (P48988) Major centromere autoantigen B (Centromere p... 59 5e-08
CEC1_CAEEL (P34618) Chromo domain protein cec-1 59 5e-08
S521_RAT (Q9QY02) Putative splicing factor YT521 (RA301-binding ... 59 9e-08
RESA_PLAFF (P13830) Ring-infected erythrocyte surface antigen pr... 58 1e-07
NMD2_YEAST (P38798) Nonsense-mediated mRNA decay protein 2 (Up-f... 58 1e-07
IF38_SCHPO (O14164) Probable eukaryotic translation initiation f... 58 1e-07
CNG4_BOVIN (Q28181) 240 kDa protein of rod photoreceptor CNG-cha... 58 1e-07
ASF1_YEAST (P32447) Anti-silencing protein 1 58 1e-07
>GARP_PLAFF (P13816) Glutamic acid-rich protein precursor
Length = 678
Score = 91.7 bits (226), Expect = 1e-17
Identities = 59/182 (32%), Positives = 92/182 (50%), Gaps = 8/182 (4%)
Query: 118 KWKPEESRASILVKVLKEFSSFDITPSENDVLCHMALISEAV--------KRDTDLTKSK 169
K K EE SI +++ ++ P ++ MA I EA K + +SK
Sbjct: 497 KSKVEEKNLSIQEQLIGTIGRVNVVPRRDNHKKKMAKIEEAELQKQKHVDKEEDKKEESK 556
Query: 170 DVHTTKKLKVIVESEENPEQENDIVESEEEDPEEENDIVESEEDPEQENDIVESEEEDLE 229
+V K E E ++E + E EEE+ EEE + E EE+ E+E D E +E+D E
Sbjct: 557 EVQEESKEVQEDEEEVEEDEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEDEDEEDEDDAE 616
Query: 230 KENDMVESAEEDPEEENDMVESAEEDPEEENDMVESAEEDPEEENDKSDGEGVLNLDEEQ 289
++ D E E+D EE++D + EED +E+ D E EE+ EEE ++S+ + NL +
Sbjct: 617 EDEDDAEEDEDDAEEDDDEEDDDEEDDDEDEDEDEEDEEEEEEEEEESEKKIKRNLRKNA 676
Query: 290 DI 291
I
Sbjct: 677 KI 678
Score = 51.2 bits (121), Expect = 1e-05
Identities = 27/84 (32%), Positives = 47/84 (55%)
Query: 211 EEDPEQENDIVESEEEDLEKENDMVESAEEDPEEENDMVESAEEDPEEENDMVESAEEDP 270
EE Q+ V+ EE+ E+ ++ E ++E E+E ++ E EE+ EEE + E EE+
Sbjct: 535 EEAELQKQKHVDKEEDKKEESKEVQEESKEVQEDEEEVEEDEEEEEEEEEEEEEEEEEEE 594
Query: 271 EEENDKSDGEGVLNLDEEQDIGYD 294
EEE ++ + E + ++E D D
Sbjct: 595 EEEEEEEEEEEDEDEEDEDDAEED 618
Score = 38.1 bits (87), Expect = 0.13
Identities = 46/200 (23%), Positives = 87/200 (43%), Gaps = 33/200 (16%)
Query: 155 ISEAVKRDTDLTKSKDVHTTKKLKVIVESEEN---PEQENDIVESEEEDPE------EEN 205
I+ + +T+L K+KD ++ + + E +E P ND +++ + E N
Sbjct: 45 ITGRLLNETELEKNKDDNSKSETLLKEEKDEKDDVPTTSNDNLKNAHNNNEISSSTDPTN 104
Query: 206 DIVESEEDPEQENDIVESEEEDLEKENDMVESAEEDPEEENDMVESA--------EEDPE 257
I +++D E D + ++E K++ + ++D +E+ D E ++ +
Sbjct: 105 IINVNDKDNENSVDKKKDKKEKKHKKDKKEKKEKKDKKEKKDKKEKKHKKEKKHKKDKKK 164
Query: 258 EENDMVESAEEDPEEENDKSDGEGVLNLDEEQDIGYDTVCAICDN--GGEILPC------ 309
+EN V S + + + + G NLDEE V I +N GG +L
Sbjct: 165 KENSEVMSLYKTGQHKPKNATEHGEENLDEEM------VSEINNNAQGGLLLSSPYQYRE 218
Query: 310 EGRC--LRSFHATLEDGRDS 327
+G C + S H T D +D+
Sbjct: 219 QGGCGIISSVHETSNDTKDN 238
Score = 37.4 bits (85), Expect = 0.22
Identities = 25/126 (19%), Positives = 56/126 (43%), Gaps = 11/126 (8%)
Query: 181 VESEENPEQEND---IVESEEEDPEEENDIVESEEDPEQENDIVESEEEDLEKENDMVES 237
V N ++ND I E ++ED ++E + ++ ++ + E+E +EK+ E
Sbjct: 228 VHETSNDTKDNDKENISEDKKEDHQQEEMLKTLDKKERKQKEKEMKEQEKIEKKKKKQEE 287
Query: 238 AEEDPEEENDMVESAEEDPEEENDMVE--------SAEEDPEEENDKSDGEGVLNLDEEQ 289
E+ +E+ + +E ++E +M + +E+ E++ K D E + +
Sbjct: 288 KEKKKQEKERKKQEKKERKQKEKEMKKQKKIEKERKKKEEKEKKKKKHDKENEETMQQPD 347
Query: 290 DIGYDT 295
+T
Sbjct: 348 QTSEET 353
Score = 36.2 bits (82), Expect = 0.49
Identities = 33/146 (22%), Positives = 57/146 (38%), Gaps = 27/146 (18%)
Query: 167 KSKDVHTTKKLKVIVESEENPEQENDIVESEEED-----PEEENDIVESEEDPEQENDIV 221
K K+ KK K E+EE +Q + E + P D+ EE E E+
Sbjct: 323 KKKEEKEKKKKKHDKENEETMQQPDQTSEETNNEIMVPLPSPLTDVTTPEEHKEGEH--- 379
Query: 222 ESEEEDLEKENDMVESAEEDPEEENDMVESAEEDPEEENDMVESAEEDPEE--------- 272
EEE E E+ E EE+ +EE E + + + ++D +
Sbjct: 380 -KEEEHKEGEHKEGEHKEEEHKEEEHKKEEHKSKEHKSKGKKDKGKKDKGKHKKAKKEKV 438
Query: 273 ---------ENDKSDGEGVLNLDEEQ 289
E++ DG ++NL++++
Sbjct: 439 KKHVVKNVIEDEDKDGVEIINLEDKE 464
Score = 35.8 bits (81), Expect = 0.64
Identities = 24/120 (20%), Positives = 56/120 (46%), Gaps = 7/120 (5%)
Query: 160 KRDTDLTKSKDVHTTKKLKVIVESE----ENPEQENDIVESEEEDPEEENDIVESEEDPE 215
K + K +D + LK + + E E +E + +E +++ EE+ + +E +
Sbjct: 240 KENISEDKKEDHQQEEMLKTLDKKERKQKEKEMKEQEKIEKKKKKQEEKEKKKQEKERKK 299
Query: 216 QENDIVESEEEDLEKENDMVESAEEDPEEENDMVESAEEDPEEENDMVESAEEDPEEEND 275
QE + +E++++K+ + + ++ E+E + + D E E M + + E N+
Sbjct: 300 QEKKERKQKEKEMKKQKKIEKERKKKEEKEK---KKKKHDKENEETMQQPDQTSEETNNE 356
Score = 35.4 bits (80), Expect = 0.84
Identities = 21/113 (18%), Positives = 62/113 (54%), Gaps = 5/113 (4%)
Query: 169 KDVHTTKKLKVIVESEENPEQENDIVESEEEDPEEENDIVESEEDPEQENDIVESEEEDL 228
K+ H +++ ++ +E ++E ++ E E+ + +++ E +E +QE + + E+++
Sbjct: 248 KEDHQQEEMLKTLDKKERKQKEKEMKEQEKIEKKKKKQ--EEKEKKKQEKERKKQEKKER 305
Query: 229 -EKENDMVESAEEDPEEENDMVESAEEDPEEENDMVESAEEDPEEENDKSDGE 280
+KE +M + ++ E+E E E+ ++ + E + P++ +++++ E
Sbjct: 306 KQKEKEMKK--QKKIEKERKKKEEKEKKKKKHDKENEETMQQPDQTSEETNNE 356
Score = 35.4 bits (80), Expect = 0.84
Identities = 34/146 (23%), Positives = 64/146 (43%), Gaps = 20/146 (13%)
Query: 155 ISEAVKRD---TDLTKSKDVHTTK-KLKVIVESEENPEQENDIVESEEEDPEEENDIVES 210
ISE K D ++ K+ D K K K + E E+ +++ E E++ E+E E
Sbjct: 243 ISEDKKEDHQQEEMLKTLDKKERKQKEKEMKEQEKIEKKKKKQEEKEKKKQEKERKKQEK 302
Query: 211 EEDPEQENDIVES---EEEDLEKENDMVESAEEDPEEENDMVESAEEDPEEENDMV---- 263
+E ++E ++ + E+E +KE + + D E E M + + E N+++
Sbjct: 303 KERKQKEKEMKKQKKIEKERKKKEEKEKKKKKHDKENEETMQQPDQTSEETNNEIMVPLP 362
Query: 264 ---------ESAEEDPEEENDKSDGE 280
E +E +E + +GE
Sbjct: 363 SPLTDVTTPEEHKEGEHKEEEHKEGE 388
Score = 33.9 bits (76), Expect = 2.4
Identities = 32/126 (25%), Positives = 53/126 (41%), Gaps = 4/126 (3%)
Query: 157 EAVKRDTDLTKSKDVHTTKKLKVIVESEENPEQENDIVESEEEDPEEENDIVESEEDPEQ 216
E K++ K K+ K+ K+ E E ++E + + + + EE + E
Sbjct: 296 ERKKQEKKERKQKEKEMKKQKKI--EKERKKKEEKEKKKKKHDKENEETMQQPDQTSEET 353
Query: 217 ENDIVESEEEDLEKENDMVESAE-EDPEEENDMVESAE-EDPEEENDMVESAEEDPEEEN 274
N+I+ L E E E EEE+ E E E EEE+ E +E+ + +
Sbjct: 354 NNEIMVPLPSPLTDVTTPEEHKEGEHKEEEHKEGEHKEGEHKEEEHKEEEHKKEEHKSKE 413
Query: 275 DKSDGE 280
KS G+
Sbjct: 414 HKSKGK 419
>NSD1_HUMAN (Q96L73) Nuclear receptor binding SET domain containing
protein 1 (NR-binding SET domain containing protein)
(Androgen receptor-associated coregulator 267)
Length = 2696
Score = 78.6 bits (192), Expect = 9e-14
Identities = 65/220 (29%), Positives = 87/220 (39%), Gaps = 45/220 (20%)
Query: 236 ESAEEDPEEENDMVESAEEDPEEENDMVESAEEDPE-EENDKSDGE--GVLNLDEEQDIG 292
+S++E P E +++ +E + E E DP + K GE G L E
Sbjct: 1490 DSSKEIPGSEGELMPHRTATSPKET-VEEGVEHDPGMPASKKMQGERGGGAALKEN---- 1544
Query: 293 YDTVCAICDNGGEILPCEGRCLRSFHATLEDGRDSLCASLGYTRTEVNAFPNFYCENCKH 352
VC C+ GE+L CE +C +FH LG T F C C+
Sbjct: 1545 ---VCQNCEKLGELLLCEAQCCGAFH----------LECLGLTEMPRG---KFICNECRT 1588
Query: 353 KKHQCFACGKLGSSDESSNPEVFPCVTANCGHYYHPECVARLLYPGIDIGQEEMRKRIII 412
H CF C + S +V C+ CG +YH ECV + YP ++
Sbjct: 1589 GIHTCFVC-------KQSGEDVKRCLLPLCGKFYHEECVQK--YP----------PTVMQ 1629
Query: 413 EKTFVCPLHICSLCRKGENRNVHDL--QFAMCRRCPKAYH 450
K F C LHIC C NV + C RCP AYH
Sbjct: 1630 NKGFRCSLHICITCHAANPANVSASKGRLMRCVRCPVAYH 1669
Score = 35.4 bits (80), Expect = 0.84
Identities = 24/102 (23%), Positives = 37/102 (35%), Gaps = 31/102 (30%)
Query: 348 ENCKHKKHQCFACGKLGSSDESSNPEVFPCVTANCGHYYHPECVARLLYPGIDIGQEEMR 407
E K ++ +CF+CG G ++ C C YH +C+ P G+ E
Sbjct: 2112 EITKEREDECFSCGDAG--------QLVSCKKPGCPKVYHADCLNLTKRPA---GKWE-- 2158
Query: 408 KRIIIEKTFVCPLHICSLCRKGENRNVHDLQFAMCRRCPKAY 449
CP H C +C K + C CP ++
Sbjct: 2159 ----------CPWHQCDICGKE--------AASFCEMCPSSF 2182
>IE68_SHV21 (Q01042) Immediate-early protein
Length = 407
Score = 72.8 bits (177), Expect = 5e-12
Identities = 42/108 (38%), Positives = 56/108 (50%)
Query: 182 ESEENPEQENDIVESEEEDPEEENDIVESEEDPEQENDIVESEEEDLEKENDMVESAEED 241
E EE E E + E E E+ E E + E EE E+E + E EE + +E E AEE+
Sbjct: 107 EEEEAEEAEEEAEEEEAEEAEAEEEEAEEEEAEEEEAEEAEEEEAEEAEEEAEEEEAEEE 166
Query: 242 PEEENDMVESAEEDPEEENDMVESAEEDPEEENDKSDGEGVLNLDEEQ 289
EEE + E AEE+ EEE + E AEE E E + + E EE+
Sbjct: 167 AEEEAEEAEEAEEEAEEEAEEAEEAEEAEEAEEEAEEAEEEAEEAEEE 214
Score = 71.2 bits (173), Expect = 1e-11
Identities = 42/109 (38%), Positives = 61/109 (55%), Gaps = 3/109 (2%)
Query: 182 ESEENPEQENDIVESEEEDPEEENDIVESEEDPEQENDIVESEEEDLEKENDMVESAEED 241
E+EE +E + E+EEE EEE + E+EE+ +E + E E E+ E+E E AEE+
Sbjct: 100 EAEEKEAEEEEAEEAEEEAEEEEAEEAEAEEEEAEEEEAEEEEAEEAEEEE--AEEAEEE 157
Query: 242 PEEENDMVESAEEDPEEENDMVESAEEDPEEENDKSDGEGVLNLDEEQD 290
EEE + E AEE+ EE + E AEE+ EE + + E EE +
Sbjct: 158 AEEE-EAEEEAEEEAEEAEEAEEEAEEEAEEAEEAEEAEEAEEEAEEAE 205
Score = 70.9 bits (172), Expect = 2e-11
Identities = 45/117 (38%), Positives = 65/117 (55%), Gaps = 8/117 (6%)
Query: 182 ESEENPEQENDIVESEE-EDPEEENDIVESEEDPEQENDIVESEEEDLEKENDMVESAEE 240
E EE E+E + E EE E+ EEE + E+EE+ E+E + E EE+ E+E + E AEE
Sbjct: 134 EEEEAEEEEAEEAEEEEAEEAEEEAEEEEAEEEAEEEAEEAEEAEEEAEEEAEEAEEAEE 193
Query: 241 --DPEEENDMVESAEEDPEEENDMVESAEEDPEEENDKSDGEGVLNLDEEQDIGYDT 295
+ EEE + E E+ EEE + E AEE E E + + E +EE++ G T
Sbjct: 194 AEEAEEEAEEAEEEAEEAEEEAEEAEEAEEAEEAEEEAEEAE-----EEEEEAGPST 245
Score = 69.3 bits (168), Expect = 5e-11
Identities = 41/111 (36%), Positives = 59/111 (52%), Gaps = 2/111 (1%)
Query: 182 ESEENPEQENDIVESEEEDPEEENDIVESEEDPEQENDIVESEE--EDLEKENDMVESAE 239
E EE E E + E+EEE+ EEE EE+ E+ + E EE E+ E+E + E AE
Sbjct: 119 EEEEAEEAEAEEEEAEEEEAEEEEAEEAEEEEAEEAEEEAEEEEAEEEAEEEAEEAEEAE 178
Query: 240 EDPEEENDMVESAEEDPEEENDMVESAEEDPEEENDKSDGEGVLNLDEEQD 290
E+ EEE + E AEE E E + E+ EE E E + + E +E ++
Sbjct: 179 EEAEEEAEEAEEAEEAEEAEEEAEEAEEEAEEAEEEAEEAEEAEEAEEAEE 229
Score = 67.8 bits (164), Expect = 2e-10
Identities = 41/97 (42%), Positives = 60/97 (61%), Gaps = 3/97 (3%)
Query: 184 EENPEQENDIVESEEEDPEEENDIVESEEDPEQENDIVESEEEDLEKENDMVESAEEDPE 243
EE E+E + E+EEE+ EE + E EE E E + E+EEE+ E+E + E+ EE+ E
Sbjct: 94 EEAEEEEAEEKEAEEEEAEEAEEEAEEEEAEEAEAEEEEAEEEEAEEE-EAEEAEEEEAE 152
Query: 244 --EENDMVESAEEDPEEENDMVESAEEDPEEENDKSD 278
EE E AEE+ EEE + E AEE+ EEE ++++
Sbjct: 153 EAEEEAEEEEAEEEAEEEAEEAEEAEEEAEEEAEEAE 189
Score = 64.7 bits (156), Expect = 1e-09
Identities = 46/143 (32%), Positives = 69/143 (48%), Gaps = 4/143 (2%)
Query: 150 CHMALISEAVKRDTDLTKS--KDVHTTKKLKVIVESEENPEQENDIVESEEEDPEEENDI 207
CH+ KR L D++TT + + + E+ E+ + E E EEE +
Sbjct: 25 CHVQCYVSPRKRRRKLKPQGDDDINTTHQQQAALTEEQRREEVEEEGEERERRGEEERE- 83
Query: 208 VESEEDPEQENDIVESEEEDLEKENDMVESAEEDPEEEN-DMVESAEEDPEEENDMVESA 266
E E+ E + E E E+ E E + E AEE+ EEE + E+ EE+ EEE E A
Sbjct: 84 GEGGEEGEGREEAEEEEAEEKEAEEEEAEEAEEEAEEEEAEEAEAEEEEAEEEEAEEEEA 143
Query: 267 EEDPEEENDKSDGEGVLNLDEEQ 289
EE EEE ++++ E EE+
Sbjct: 144 EEAEEEEAEEAEEEAEEEEAEEE 166
Score = 64.3 bits (155), Expect = 2e-09
Identities = 40/110 (36%), Positives = 58/110 (52%), Gaps = 1/110 (0%)
Query: 182 ESEENPEQENDIVESEEEDPEEENDIVESEEDPEQENDIVESEEEDLEKENDMVESAEED 241
E E E+E + EE + EE + E+EE +E + E+EEE E+E + E+ EE+
Sbjct: 73 ERERRGEEEREGEGGEEGEGREEAEEEEAEEKEAEEEEAEEAEEEAEEEEAEEAEAEEEE 132
Query: 242 PEEENDMVESAEEDPEEE-NDMVESAEEDPEEENDKSDGEGVLNLDEEQD 290
EEE E AEE EEE + E AEE+ EE + + E +EE +
Sbjct: 133 AEEEEAEEEEAEEAEEEEAEEAEEEAEEEEAEEEAEEEAEEAEEAEEEAE 182
Score = 61.6 bits (148), Expect = 1e-08
Identities = 42/109 (38%), Positives = 56/109 (50%), Gaps = 7/109 (6%)
Query: 182 ESEENPEQENDIVESEEEDPEEENDIVESEEDPEQENDIVESEEEDLEKENDMVESAEED 241
E E E+E E+EE++ EEE EE E+E + E+EEE+ E+E E AEE
Sbjct: 91 EGREEAEEE----EAEEKEAEEEEAEEAEEEAEEEEAEEAEAEEEEAEEEEAEEEEAEEA 146
Query: 242 PEEENDMVESAEEDPEEENDMVESAEEDPEEENDKSDGEGVLNLDEEQD 290
EEE E AEE+ EEE E+ EE E E + + E EE +
Sbjct: 147 EEEE---AEEAEEEAEEEEAEEEAEEEAEEAEEAEEEAEEEAEEAEEAE 192
Score = 54.3 bits (129), Expect = 2e-06
Identities = 34/124 (27%), Positives = 59/124 (47%), Gaps = 4/124 (3%)
Query: 157 EAVKRDTDLTKSKDVHTTKKLKVIVESEENPEQENDIVESEEEDPEEENDIVESEEDPEQ 216
EA + + + + ++ ++ E+EE E+E + E EE+ EEE + E E+ E+
Sbjct: 137 EAEEEEAEEAEEEEAEEAEEEAEEEEAEEEAEEEAEEAEEAEEEAEEEAEEAEEAEEAEE 196
Query: 217 ENDIVESEEEDLEKENDMVESAEEDPEEENDMVESAEEDPEEENDMVESAEEDPEEENDK 276
E E E+ E+E + E E+ EE + E+ EE E E + E+ P + K
Sbjct: 197 ----AEEEAEEAEEEAEEAEEEAEEAEEAEEAEEAEEEAEEAEEEEEEAGPSTPRLPHYK 252
Query: 277 SDGE 280
G+
Sbjct: 253 VVGQ 256
>RPG1_MOUSE (Q9EPQ2) X-linked retinitis pigmentosa GTPase
regulator-interacting protein 1 (RPGR-interacting
protein 1)
Length = 1331
Score = 68.6 bits (166), Expect = 9e-11
Identities = 44/136 (32%), Positives = 74/136 (54%), Gaps = 7/136 (5%)
Query: 156 SEAVKRDTDLTKSKDVHTTKKLKVIVESEENPEQENDIVESEEEDPEEENDIVESEEDPE 215
++++K D +LT S + + +KV ++ + + SE E PE E E E+
Sbjct: 863 NKSIKGDFNLTDSGE-KSNGSIKVQLDWKSHYLAPEGFQMSEAEKPEGEEKEEEGGEEEV 921
Query: 216 QENDIVESEEEDLEKENDMVESAEEDPEEENDMVESAEEDPEEENDMVESAEEDPEEEND 275
+E ++ E EEE+ E+E ++ E EE+ EEE + E EE+ EEE + E EE+ EEE +
Sbjct: 922 KEEEVEEEEEEE-EEEEEVKEEKEEEEEEEREEEEEKEEEKEEEEEEDEKEEEEEEEEEE 980
Query: 276 KSDGEGVLNLDEEQDI 291
+ + E DE +D+
Sbjct: 981 EEEEE-----DENKDV 991
Score = 59.7 bits (143), Expect = 4e-08
Identities = 37/116 (31%), Positives = 62/116 (52%), Gaps = 6/116 (5%)
Query: 155 ISEAVKRDTDLTKSKDVHTTKKLKVIVESEENPEQENDIVESEEEDPEEENDIVESEEDP 214
+SEA K + + + + K + + E EE E+E ++ E +EE+ EEE E EE+
Sbjct: 901 MSEAEKPEGEEKEEEGGEEEVKEEEVEEEEEEEEEEEEVKEEKEEEEEEER---EEEEEK 957
Query: 215 EQENDIVESEEEDLEKENDMVESAEEDPEEENDMVESA---EEDPEEENDMVESAE 267
E+E + E E+E E+E + E EE+ +E D++E++ E P D + S E
Sbjct: 958 EEEKEEEEEEDEKEEEEEEEEEEEEEEEDENKDVLEASFTEEWVPFFSQDQIASTE 1013
Score = 57.4 bits (137), Expect = 2e-07
Identities = 38/94 (40%), Positives = 55/94 (58%), Gaps = 8/94 (8%)
Query: 182 ESEENPEQE--NDIVESEEEDPEEENDIVESEEDPEQENDIVESEEEDLEKENDMVESAE 239
+ EE E+E + VE EEE+ EEE ++ E +E+ E+E E EEE+ EKE + E E
Sbjct: 912 KEEEGGEEEVKEEEVEEEEEEEEEEEEVKEEKEEEEEE----EREEEE-EKEEEKEEEEE 966
Query: 240 EDPEEENDMVESAEEDPEEENDMVESAEEDPEEE 273
ED +EE + E EE+ EEE++ + E EE
Sbjct: 967 EDEKEEEEE-EEEEEEEEEEDENKDVLEASFTEE 999
Score = 40.0 bits (92), Expect = 0.034
Identities = 27/117 (23%), Positives = 55/117 (46%), Gaps = 2/117 (1%)
Query: 157 EAVKRDTDLTKSKDVHTTKKLKVIVESEENPEQENDIVESEEEDPEEENDIVESEEDPEQ 216
E + + + + ++V K+ + E EE E+E + E EEED +EE + E EE+ E+
Sbjct: 925 EVEEEEEEEEEEEEVKEEKEEEEEEEREEEEEKEEEKEEEEEEDEKEEEE--EEEEEEEE 982
Query: 217 ENDIVESEEEDLEKENDMVESAEEDPEEENDMVESAEEDPEEENDMVESAEEDPEEE 273
E + + + + V +D ++ A + PE+ V + +++ E +
Sbjct: 983 EEEDENKDVLEASFTEEWVPFFSQDQIASTEIPIEAGQYPEKRKPPVIAEKKEREHQ 1039
>YCF2_OENVI (P31569) Protein ycf2 (Fragment)
Length = 630
Score = 66.2 bits (160), Expect = 4e-10
Identities = 36/104 (34%), Positives = 63/104 (59%), Gaps = 14/104 (13%)
Query: 181 VESEENPEQENDIVESEEEDP------EEENDIVESEE---DPEQENDIVESEEEDLEKE 231
+ +EE PE+E+++ E E EEE + + E+ + +QE++++E E+E+L++E
Sbjct: 401 IPAEEIPEEEDELPEDALETEVAVWGVEEEGEADDEEDVLLEAQQEDELLEEEDEELDEE 460
Query: 232 NDMVESAEEDPEEENDMVESAEEDPEEENDMVESAEEDPEEEND 275
D ++ EE+P+EE D + EE+ EEE + EED +END
Sbjct: 461 EDELDEEEEEPKEEEDELHEEEEEEEEEEE-----EEDELQEND 499
Score = 58.5 bits (140), Expect = 9e-08
Identities = 39/123 (31%), Positives = 64/123 (51%), Gaps = 5/123 (4%)
Query: 157 EAVKRDTDLTKSKDVHTTKKLKVIVESEENPEQENDIVESEEEDPEEENDIVESEEDPEQ 216
E + + + T+ ++V T++ + +EE E + VE EE+ E + VE ED E
Sbjct: 208 EGTEEEVEGTEDEEVEGTEE--EVEGTEEEVEGTEEEVEGTEEEVEGTEEEVEGTEDEEV 265
Query: 217 EN--DIVESEEEDLEKENDMVESAEEDPEEENDMVESAEEDPEEENDMVESAEEDPEE-E 273
E + VE EE++E + VE EE+ E + VE EE+ E + VE E+D + +
Sbjct: 266 EGTEEEVEGTEEEVEGTEEEVEGTEEEVEGTEEEVEGTEEEVEGTEEEVEGTEKDSSQFD 325
Query: 274 NDK 276
ND+
Sbjct: 326 NDR 328
Score = 58.2 bits (139), Expect = 1e-07
Identities = 57/222 (25%), Positives = 101/222 (44%), Gaps = 23/222 (10%)
Query: 70 WRFELSFEQPEISVLLREKYWMTLLKPSKCFENTIRSVLVTVYWLHCVKWKPEESRASIL 129
W FEL ++++LL Y +T C +I L++ P +++
Sbjct: 105 WYFELGTSMKKLTILL---YLLT------CSAGSIAQDLLS---------PPGPDEQNLI 146
Query: 130 VKVLKEFSSFDITPSENDVLCHMALISEAVKRDTDLTKSKDVHTTKKLKVIVESEENPEQ 189
+ D+ +D++ H L E + T+ + T ++++ E E E+
Sbjct: 147 TSYGLVENDSDLVHGLSDIV-HGLLELEGALVGSSPTEEEVEGTEEEVEGTEEEVEGTEE 205
Query: 190 ENDIVESEEEDPEEENDIVESEEDPEQENDIVESEEEDLEKENDMVESAEEDPE-EENDM 248
E + E E E E+E ++ +EE+ E + VE EE++E + VE EE+ E E++
Sbjct: 206 EVEGTEEEVEGTEDE-EVEGTEEEVEGTEEEVEGTEEEVEGTEEEVEGTEEEVEGTEDEE 264
Query: 249 VESAEEDPEEENDMVESAEEDPEEENDKSDG--EGVLNLDEE 288
VE EE+ E + VE EE+ E ++ +G E V +EE
Sbjct: 265 VEGTEEEVEGTEEEVEGTEEEVEGTEEEVEGTEEEVEGTEEE 306
Score = 55.8 bits (133), Expect = 6e-07
Identities = 39/139 (28%), Positives = 71/139 (51%), Gaps = 10/139 (7%)
Query: 142 TPSENDVLCHMALISEAVKRDTDLTKSKDVHTTKKLKVIVESEENPEQENDIVESEEEDP 201
+P+E +V E + + + T+ + T ++++ E E E E ++ +EEE
Sbjct: 180 SPTEEEV--------EGTEEEVEGTEEEVEGTEEEVEGTEEEVEGTEDE-EVEGTEEEVE 230
Query: 202 EEENDIVESEEDPEQENDIVESEEEDLE-KENDMVESAEEDPEEENDMVESAEEDPEEEN 260
E ++ +EE+ E + VE EE++E E++ VE EE+ E + VE EE+ E
Sbjct: 231 GTEEEVEGTEEEVEGTEEEVEGTEEEVEGTEDEEVEGTEEEVEGTEEEVEGTEEEVEGTE 290
Query: 261 DMVESAEEDPEEENDKSDG 279
+ VE EE+ E ++ +G
Sbjct: 291 EEVEGTEEEVEGTEEEVEG 309
Score = 54.3 bits (129), Expect = 2e-06
Identities = 34/112 (30%), Positives = 59/112 (52%), Gaps = 1/112 (0%)
Query: 169 KDVHTTKKLKVIVESEENPEQENDIVESEEEDPEEENDIVESEEDPEQENDIVE-SEEED 227
++V T++ E EE E ++ +EEE E ++ +EE+ E + VE +E+E+
Sbjct: 205 EEVEGTEEEVEGTEDEEVEGTEEEVEGTEEEVEGTEEEVEGTEEEVEGTEEEVEGTEDEE 264
Query: 228 LEKENDMVESAEEDPEEENDMVESAEEDPEEENDMVESAEEDPEEENDKSDG 279
+E + VE EE+ E + VE EE+ E + VE EE+ E ++ +G
Sbjct: 265 VEGTEEEVEGTEEEVEGTEEEVEGTEEEVEGTEEEVEGTEEEVEGTEEEVEG 316
Score = 53.9 bits (128), Expect = 2e-06
Identities = 40/136 (29%), Positives = 69/136 (50%), Gaps = 4/136 (2%)
Query: 156 SEAVKRDTDLTKSKDVHTTKKLKVIVESEENPEQENDIVESEEEDPEEENDIVESEEDPE 215
S + + + T+ + T ++++ E E E+E + E EE + EE ++ +EE+ E
Sbjct: 179 SSPTEEEVEGTEEEVEGTEEEVEGTEEEVEGTEEEVEGTEDEEVEGTEE-EVEGTEEEVE 237
Query: 216 QENDIVESEEEDLEKENDMVESAE-EDPEEENDMVESAEEDPEEENDMVESAEEDPEEEN 274
+ VE EE++E + VE E E+ E + VE EE+ E + VE EE+ E
Sbjct: 238 GTEEEVEGTEEEVEGTEEEVEGTEDEEVEGTEEEVEGTEEEVEGTEEEVEGTEEEVEGTE 297
Query: 275 DKSDG--EGVLNLDEE 288
++ +G E V +EE
Sbjct: 298 EEVEGTEEEVEGTEEE 313
Score = 53.9 bits (128), Expect = 2e-06
Identities = 37/111 (33%), Positives = 58/111 (51%), Gaps = 2/111 (1%)
Query: 169 KDVHTTKKLKVIVESEENPEQENDIVESEEEDPEEENDIVESEEDPE-QENDIVESEEED 227
++V T+ +V EE E ++ +EEE E ++ +EE+ E E++ VE EE+
Sbjct: 212 EEVEGTEDEEVEGTEEEVEGTEEEVEGTEEEVEGTEEEVEGTEEEVEGTEDEEVEGTEEE 271
Query: 228 LEKENDMVESAEEDPEEENDMVESAEEDPEEENDMVESAEEDPE-EENDKS 277
+E + VE EE+ E + VE EE+ E + VE EE+ E E D S
Sbjct: 272 VEGTEEEVEGTEEEVEGTEEEVEGTEEEVEGTEEEVEGTEEEVEGTEKDSS 322
Score = 53.9 bits (128), Expect = 2e-06
Identities = 32/108 (29%), Positives = 57/108 (52%), Gaps = 3/108 (2%)
Query: 150 CHMALISEAVKRDTDLTKSKDVHTTKKLKVIVESEENPEQENDIVESEEEDPEEENDIVE 209
C + +E + + D + T + + E E ++E+ ++E+++ED E E
Sbjct: 397 CEAEIPAEEIPEEEDELPEDALETEVAVWGVEEEGEADDEEDVLLEAQQEDELLEE---E 453
Query: 210 SEEDPEQENDIVESEEEDLEKENDMVESAEEDPEEENDMVESAEEDPE 257
EE E+E+++ E EEE E+E+++ E EE+ EEE + E E D E
Sbjct: 454 DEELDEEEDELDEEEEEPKEEEDELHEEEEEEEEEEEEEDELQENDSE 501
Score = 52.0 bits (123), Expect = 9e-06
Identities = 30/93 (32%), Positives = 55/93 (58%), Gaps = 5/93 (5%)
Query: 198 EEDPEEENDIVESEEDPEQENDIVESEEEDLEKENDMVESAEEDPEEENDMVESAEEDPE 257
EE PEEE+++ E + E VE E E ++E+ ++E+ +ED +++E +E+ +
Sbjct: 404 EEIPEEEDELPEDALETEVAVWGVEEEGEADDEEDVLLEAQQED-----ELLEEEDEELD 458
Query: 258 EENDMVESAEEDPEEENDKSDGEGVLNLDEEQD 290
EE D ++ EE+P+EE D+ E +EE++
Sbjct: 459 EEEDELDEEEEEPKEEEDELHEEEEEEEEEEEE 491
Score = 52.0 bits (123), Expect = 9e-06
Identities = 27/93 (29%), Positives = 52/93 (55%), Gaps = 22/93 (23%)
Query: 208 VESEEDPEQENDIVE------------------SEEEDL----EKENDMVESAEEDPEEE 245
+ +EE PE+E+++ E +EED+ ++E++++E +E+ +EE
Sbjct: 401 IPAEEIPEEEDELPEDALETEVAVWGVEEEGEADDEEDVLLEAQQEDELLEEEDEELDEE 460
Query: 246 NDMVESAEEDPEEENDMVESAEEDPEEENDKSD 278
D ++ EE+P+EE D + EE+ EEE ++ D
Sbjct: 461 EDELDEEEEEPKEEEDELHEEEEEEEEEEEEED 493
Score = 49.3 bits (116), Expect = 6e-05
Identities = 32/108 (29%), Positives = 57/108 (52%), Gaps = 2/108 (1%)
Query: 157 EAVKRDTDLTKSKDVHTTKKLKVIVESEENPEQENDIVESEEEDPEEENDIVESEEDPEQ 216
E + + + T+ + T ++++ E E E+E + E EE + EE ++ +EE+ E
Sbjct: 223 EGTEEEVEGTEEEVEGTEEEVEGTEEEVEGTEEEVEGTEDEEVEGTEE-EVEGTEEEVEG 281
Query: 217 ENDIVESEEEDLEKENDMVESAEEDPEEENDMVESAEEDPEE-ENDMV 263
+ VE EE++E + VE EE+ E + VE E+D + +ND V
Sbjct: 282 TEEEVEGTEEEVEGTEEEVEGTEEEVEGTEEEVEGTEKDSSQFDNDRV 329
Score = 39.3 bits (90), Expect = 0.058
Identities = 29/84 (34%), Positives = 44/84 (51%), Gaps = 6/84 (7%)
Query: 209 ESEEDPEQENDIVESEEEDLEKENDMVESAEEDPE-EENDMVESAEEDPEEENDMVESAE 267
E E E+E + E E E E+E VE EE+ E E++ VE EE+ E + VE E
Sbjct: 184 EEVEGTEEEVEGTEEEVEGTEEE---VEGTEEEVEGTEDEEVEGTEEEVEGTEEEVEGTE 240
Query: 268 EDPEEENDKSDG--EGVLNLDEEQ 289
E+ E ++ +G E V ++E+
Sbjct: 241 EEVEGTEEEVEGTEEEVEGTEDEE 264
Score = 37.0 bits (84), Expect = 0.29
Identities = 23/93 (24%), Positives = 48/93 (50%), Gaps = 5/93 (5%)
Query: 160 KRDTDLTKSKDVHTTKKLKVIVESEENPEQENDIV----ESEEEDPEEENDIVESEEDPE 215
+++ +L + +D ++ + E EE P++E D + E EEE+ EEE+++ E++ +
Sbjct: 444 QQEDELLEEEDEELDEEEDELDEEEEEPKEEEDELHEEEEEEEEEEEEEDELQENDSEFF 503
Query: 216 QENDIVESEEEDLEKENDMVESAEEDPEEENDM 248
+ I+ K+ D+ E PEE ++
Sbjct: 504 RVKPIIPRHRWIFRKKKDVFEVLSY-PEEATEI 535
Score = 33.9 bits (76), Expect = 2.4
Identities = 34/115 (29%), Positives = 59/115 (50%), Gaps = 20/115 (17%)
Query: 195 ESEEEDPEEENDIVESEEDPEQENDIVESEEE----DLEKENDMVESAEEDPEEENDMVE 250
E EE+D ++E+ + + +++V S D + + AEE PEEE+++ E
Sbjct: 356 ELEEDDDDDEDVFAPQKMLEDLFSELVWSPRIWHPWDFLLDCEAEIPAEEIPEEEDELPE 415
Query: 251 SA----------EEDPE---EENDMVESAEEDP--EEENDKSDGEGVLNLDEEQD 290
A EE+ E EE+ ++E+ +ED EEE+++ D E LDEE++
Sbjct: 416 DALETEVAVWGVEEEGEADDEEDVLLEAQQEDELLEEEDEELDEEED-ELDEEEE 469
>NAB3_YEAST (P38996) Nuclear polyadenylated RNA-binding protein 3
Length = 802
Score = 63.5 bits (153), Expect = 3e-09
Identities = 38/108 (35%), Positives = 63/108 (58%), Gaps = 13/108 (12%)
Query: 184 EENPEQEN--DIVESEEEDPEEEND----IVESEEDPEQENDIV---ESEEEDLEKENDM 234
EEN EQ D+ + EEED EE+ + ++ +EE+ E+E+ + +++D E+E +
Sbjct: 54 EENEEQHELEDVNDEEEEDKEEKGEENGEVINTEEEEEEEHQQKGGNDDDDDDNEEEEEE 113
Query: 235 VESAEEDPEEENDMVESAEEDPEEENDMV----ESAEEDPEEENDKSD 278
E ++D ++++D E EE+ EE ND +SA ED E+E DK D
Sbjct: 114 EEDDDDDDDDDDDDEEEEEEEEEEGNDNSSVGSDSAAEDGEDEEDKKD 161
Score = 62.0 bits (149), Expect = 8e-09
Identities = 45/155 (29%), Positives = 77/155 (49%), Gaps = 17/155 (10%)
Query: 163 TDLTKSKDVHTTKKLKVIVESEENPEQENDIVESEEED-------PEEENDIVESEEDPE 215
+D + DV ++ V+S N EN+++ + D PEEE + EE+ E
Sbjct: 2 SDENHNSDVQDIPSPELSVDSNSN---ENELMNNSSADDGIEFDAPEEEREAEREEENEE 58
Query: 216 QEN--DIVESEEEDLEK---ENDMVESAEEDPEEENDMVESAEEDPEEENDMVESAEEDP 270
Q D+ + EEED E+ EN V + EE+ EEE+ + +D +++N+ E EED
Sbjct: 59 QHELEDVNDEEEEDKEEKGEENGEVINTEEEEEEEHQQ-KGGNDDDDDDNEEEEEEEED- 116
Query: 271 EEENDKSDGEGVLNLDEEQDIGYDTVCAICDNGGE 305
++++D D + +EE++ G D D+ E
Sbjct: 117 DDDDDDDDDDDEEEEEEEEEEGNDNSSVGSDSAAE 151
Score = 53.9 bits (128), Expect = 2e-06
Identities = 34/125 (27%), Positives = 64/125 (51%), Gaps = 18/125 (14%)
Query: 182 ESEENPEQENDIVESEEEDPEEE-----NDIVESEEDPEQENDIVESEEEDLEKENDMVE 236
+ EE E+ +++ +EEE+ EE ND + ++D E+E + E +++D + ++D E
Sbjct: 72 DKEEKGEENGEVINTEEEEEEEHQQKGGND--DDDDDNEEEEEEEEDDDDDDDDDDDDEE 129
Query: 237 SAEEDPEEENDMV----ESAEEDPEEENDMVESAEE-------DPEEENDKSDGEGVLNL 285
EE+ EE ND +SA ED E+E D + ++ + E+ K E + +
Sbjct: 130 EEEEEEEEGNDNSSVGSDSAAEDGEDEEDKKDKTKDKEVELRRETLEKEQKDVDEAIKKI 189
Query: 286 DEEQD 290
E++
Sbjct: 190 TREEN 194
Score = 51.6 bits (122), Expect = 1e-05
Identities = 33/110 (30%), Positives = 58/110 (52%), Gaps = 14/110 (12%)
Query: 182 ESEENPEQENDIVESEEEDPEEENDIVESEEDPEQENDIVESEEEDLEKE---NDMV--E 236
E EE Q+ + +++D EEE + E ++D + ++D E EEE+ E+E N V +
Sbjct: 88 EEEEEEHQQKGGNDDDDDDNEEEEEEEEDDDDDDDDDDDDEEEEEEEEEEGNDNSSVGSD 147
Query: 237 SAEEDPEEENDMVESAEED---------PEEENDMVESAEEDPEEENDKS 277
SA ED E+E D + ++ +E+ D+ E+ ++ EEND +
Sbjct: 148 SAAEDGEDEEDKKDKTKDKEVELRRETLEKEQKDVDEAIKKITREENDNT 197
>YCF2_OENPI (P31568) Protein ycf2 (Fragment)
Length = 721
Score = 62.4 bits (150), Expect = 6e-09
Identities = 31/108 (28%), Positives = 63/108 (57%), Gaps = 5/108 (4%)
Query: 181 VESEENPEQENDIVESEEEDPEEENDIVESEEDPEQENDIVESEEEDLEKENDMVESAEE 240
+ +EE PE+E+++ E E + E E ++E+ ++E+++ED +++E +E
Sbjct: 490 IPAEEIPEEEDELPEDALETEVAVWGVEEEGEADDEEDVLLEAQQED-----ELLEEEDE 544
Query: 241 DPEEENDMVESAEEDPEEENDMVESAEEDPEEENDKSDGEGVLNLDEE 288
+ +EE D ++ EE+P+EE D + EE+ EEE ++ + + + D E
Sbjct: 545 ELDEEEDELDEEEEEPKEEEDELHEEEEEEEEEEEEEEEDELQENDSE 592
Score = 58.5 bits (140), Expect = 9e-08
Identities = 42/132 (31%), Positives = 65/132 (48%), Gaps = 9/132 (6%)
Query: 157 EAVKRDTDLTKSKDVHTTKKLKVIVESEENPEQENDIVESEEEDPEEENDIVESEEDPEQ 216
E + + + T+ ++V T+ E E E+E + E E E EEE + E EE
Sbjct: 201 EGTEEEVEGTEDEEVEGTE------EEVEGTEEEVEGTEEEVEGTEEEVEGTEDEEVEGT 254
Query: 217 ENDIVESEEEDLEKENDMVESAEEDPEEENDMVESAEEDPEEENDMVESAEEDPEEENDK 276
E++ VE EE++E + VE EE+ E + VE E +EE + E E EEE +
Sbjct: 255 EDEEVEGTEEEVEGTEEEVEGTEEEVEGTEEEVEGTE---DEEVEGTEEEVEGTEEEVEG 311
Query: 277 SDGEGVLNLDEE 288
++ E V +EE
Sbjct: 312 TEDEEVEGTEEE 323
Score = 58.2 bits (139), Expect = 1e-07
Identities = 39/123 (31%), Positives = 63/123 (50%), Gaps = 6/123 (4%)
Query: 157 EAVKRDTDLTKSKDVHTTKKLKVIVESEENPEQENDIVESEEEDPEEENDIVESEEDPEQ 216
E + + + T+ ++V T++ +V EE E++ VE EE+ E + VE ED E
Sbjct: 281 EGTEEEVEGTEDEEVEGTEE-EVEGTEEEVEGTEDEEVEGTEEEVEGTEEEVEGTEDEE- 338
Query: 217 ENDIVESEEEDLEKENDMVESAEEDPEEENDMVESAEEDPEEENDMVESAEEDPEEENDK 276
VE EE++E + VE EE+ E + VE EE+ E + VE EE+ E ++
Sbjct: 339 ----VEGTEEEVEGTEEEVEGTEEEVEGTEEEVEGTEEEVEGTEEEVEGTEEEVEGTEEE 394
Query: 277 SDG 279
+G
Sbjct: 395 VEG 397
Score = 57.0 bits (136), Expect = 3e-07
Identities = 44/137 (32%), Positives = 69/137 (50%), Gaps = 7/137 (5%)
Query: 157 EAVKRDTDLTKSKDVHTTKKLKVIVESEENPEQENDIVESEEEDPEEENDIVESEEDPEQ 216
E + + + T+ + T ++++ E E E E VE EE+ E + VE ED E
Sbjct: 260 EGTEEEVEGTEEEVEGTEEEVEGTEEEVEGTEDEE--VEGTEEEVEGTEEEVEGTEDEEV 317
Query: 217 EN--DIVESEEEDLE-KENDMVESAEEDPEEENDMVESAEEDPEEENDMVESAEEDPEEE 273
E + VE EE++E E++ VE EE+ E + VE EE+ E + VE EE+ E
Sbjct: 318 EGTEEEVEGTEEEVEGTEDEEVEGTEEEVEGTEEEVEGTEEEVEGTEEEVEGTEEEVEGT 377
Query: 274 NDKSDG--EGVLNLDEE 288
++ +G E V +EE
Sbjct: 378 EEEVEGTEEEVEGTEEE 394
Score = 55.8 bits (133), Expect = 6e-07
Identities = 46/152 (30%), Positives = 75/152 (49%), Gaps = 11/152 (7%)
Query: 143 PSENDVLCHMALISEAVKRDTDLTK--SKDVHTTKKLKVIVESEENPEQENDIVESEEED 200
P E +++ L V+ D+DL S VH +L+ + E+E + E E E
Sbjct: 140 PDEQNLITSYGL----VENDSDLVHGLSDIVHGLLELEGALVGSSPTEEEVEGTEEEVEG 195
Query: 201 PEEENDIVESEEDPEQENDIVESEEEDLEKENDMVESAEEDPEEENDMVESAEEDPEE-- 258
EEE + E E + ++ + VE EE++E + VE EE+ E + VE E++ E
Sbjct: 196 TEEEVEGTEEEVEGTEDEE-VEGTEEEVEGTEEEVEGTEEEVEGTEEEVEGTEDEEVEGT 254
Query: 259 ENDMVESAEEDPEEENDKSDG--EGVLNLDEE 288
E++ VE EE+ E ++ +G E V +EE
Sbjct: 255 EDEEVEGTEEEVEGTEEEVEGTEEEVEGTEEE 286
Score = 55.5 bits (132), Expect = 8e-07
Identities = 39/121 (32%), Positives = 65/121 (53%), Gaps = 5/121 (4%)
Query: 173 TTKKLKVIVESEENPEQENDIVESEEEDPEEENDIVESEEDPEQENDIVESEEEDLEKEN 232
T ++++ E E E+E + E EE + E+ ++ +EE+ E + VE EE++E
Sbjct: 225 TEEEVEGTEEEVEGTEEEVEGTEDEEVEGTEDEEVEGTEEEVEGTEEEVEGTEEEVEGTE 284
Query: 233 DMVESAE-EDPEEENDMVESAEEDPE-EENDMVESAEED---PEEENDKSDGEGVLNLDE 287
+ VE E E+ E + VE EE+ E E++ VE EE+ EEE + ++ E V +E
Sbjct: 285 EEVEGTEDEEVEGTEEEVEGTEEEVEGTEDEEVEGTEEEVEGTEEEVEGTEDEEVEGTEE 344
Query: 288 E 288
E
Sbjct: 345 E 345
Score = 54.7 bits (130), Expect = 1e-06
Identities = 38/122 (31%), Positives = 65/122 (53%), Gaps = 9/122 (7%)
Query: 157 EAVKRDTDLTKSKDVHTTKKLKVIVESEENPEQENDIVESEEEDPEEENDIVESEEDPEQ 216
E + + + T+ ++V T+ E E E+E + E EE + EE ++ +EE+ E
Sbjct: 303 EGTEEEVEGTEDEEVEGTE------EEVEGTEEEVEGTEDEEVEGTEE-EVEGTEEEVEG 355
Query: 217 ENDIVESEEEDLEKENDMVESAEEDPEEENDMVESAEEDPE-EENDMVESAEEDPEE-EN 274
+ VE EE++E + VE EE+ E + VE EE+ E E++ VE E+D + +N
Sbjct: 356 TEEEVEGTEEEVEGTEEEVEGTEEEVEGTEEEVEGTEEEVEGTEDEEVEGTEKDSSQFDN 415
Query: 275 DK 276
D+
Sbjct: 416 DR 417
Score = 53.5 bits (127), Expect = 3e-06
Identities = 32/112 (28%), Positives = 59/112 (52%), Gaps = 7/112 (6%)
Query: 150 CHMALISEAVKRDTDLTKSKDVHTTKKLKVIVESEENPEQENDIVESEEEDPEEENDIVE 209
C + +E + + D + T + + E E ++E+ ++E+++ED E E
Sbjct: 486 CEAEIPAEEIPEEEDELPEDALETEVAVWGVEEEGEADDEEDVLLEAQQEDELLE----E 541
Query: 210 SEEDPEQENDIVESEEEDLEKENDMVESAEEDPEEENDMVESAEEDPEEEND 261
+E+ ++E D ++ EEE+ ++E D + EE+ EEE E EED +END
Sbjct: 542 EDEELDEEEDELDEEEEEPKEEEDELHEEEEEEEEEE---EEEEEDELQEND 590
Score = 52.8 bits (125), Expect = 5e-06
Identities = 44/149 (29%), Positives = 71/149 (47%), Gaps = 22/149 (14%)
Query: 157 EAVKRDTDLTKSKDVHTTKKLKVIVESEENPEQENDIVESEEEDPEEE----NDIVESEE 212
E + + + T+ ++V T+ E E E+E + E E E EEE + VE E
Sbjct: 237 EGTEEEVEGTEDEEVEGTED-----EEVEGTEEEVEGTEEEVEGTEEEVEGTEEEVEGTE 291
Query: 213 DPE----------QENDIVESEEEDLEKENDMVESAEEDPE-EENDMVESAEEDPEEEND 261
D E E ++ +E+E++E + VE EE+ E E++ VE EE+ E +
Sbjct: 292 DEEVEGTEEEVEGTEEEVEGTEDEEVEGTEEEVEGTEEEVEGTEDEEVEGTEEEVEGTEE 351
Query: 262 MVESAEEDPEEENDKSDG--EGVLNLDEE 288
VE EE+ E ++ +G E V +EE
Sbjct: 352 EVEGTEEEVEGTEEEVEGTEEEVEGTEEE 380
Score = 52.4 bits (124), Expect = 7e-06
Identities = 33/97 (34%), Positives = 55/97 (56%), Gaps = 8/97 (8%)
Query: 143 PSENDVLCHMALISEA----VKRDTDLTKSKDV--HTTKKLKVIVESEENPEQENDIVES 196
P E D L AL +E V+ + + +DV ++ +++ E +E ++E D ++
Sbjct: 496 PEEEDELPEDALETEVAVWGVEEEGEADDEEDVLLEAQQEDELLEEEDEELDEEEDELDE 555
Query: 197 EEEDPEEENDIVESEEDPEQENDIVESEEEDLEKEND 233
EEE+P+EE D + EE+ E+E + E EEED +END
Sbjct: 556 EEEEPKEEEDELHEEEEEEEEEE--EEEEEDELQEND 590
Score = 52.0 bits (123), Expect = 9e-06
Identities = 30/93 (32%), Positives = 55/93 (58%), Gaps = 5/93 (5%)
Query: 198 EEDPEEENDIVESEEDPEQENDIVESEEEDLEKENDMVESAEEDPEEENDMVESAEEDPE 257
EE PEEE+++ E + E VE E E ++E+ ++E+ +ED +++E +E+ +
Sbjct: 493 EEIPEEEDELPEDALETEVAVWGVEEEGEADDEEDVLLEAQQED-----ELLEEEDEELD 547
Query: 258 EENDMVESAEEDPEEENDKSDGEGVLNLDEEQD 290
EE D ++ EE+P+EE D+ E +EE++
Sbjct: 548 EEEDELDEEEEEPKEEEDELHEEEEEEEEEEEE 580
Score = 51.6 bits (122), Expect = 1e-05
Identities = 53/209 (25%), Positives = 94/209 (44%), Gaps = 22/209 (10%)
Query: 70 WRFELSFEQPEISVLLREKYWMTLLKPSKCFENTIRSVLVTVYWLHCVKWKPEESRASIL 129
W FEL ++++LL Y +T C +I L++ P +++
Sbjct: 105 WYFELGTSMKKLTILL---YLLT------CSAGSIAQDLLS---------PPGPDEQNLI 146
Query: 130 VKVLKEFSSFDITPSENDVLCHMALISEAVKRDTDLTKSKDVHTTKKLKVIVESEENPEQ 189
+ D+ +D++ H L E + T+ + T ++++ E E E+
Sbjct: 147 TSYGLVENDSDLVHGLSDIV-HGLLELEGALVGSSPTEEEVEGTEEEVEGTEEEVEGTEE 205
Query: 190 ENDIVESEEEDPEEENDIVESEEDPEQENDIVESEEEDLE-KENDMVESAE-EDPEEEND 247
E + E EE + EE ++ +EE+ E + VE EE++E E++ VE E E+ E +
Sbjct: 206 EVEGTEDEEVEGTEE-EVEGTEEEVEGTEEEVEGTEEEVEGTEDEEVEGTEDEEVEGTEE 264
Query: 248 MVESAEEDPEEENDMVESAEEDPEEENDK 276
VE EE+ E + VE EE+ E D+
Sbjct: 265 EVEGTEEEVEGTEEEVEGTEEEVEGTEDE 293
Score = 45.1 bits (105), Expect = 0.001
Identities = 31/84 (36%), Positives = 46/84 (53%), Gaps = 4/84 (4%)
Query: 182 ESEENPEQENDIVESEEEDPEEENDIVESEEDPEQENDIVESEEEDLEKENDMVESAEED 241
E E E+E + E E E EEE + +EE+ E + VE EE++E + VE EE+
Sbjct: 337 EEVEGTEEEVEGTEEEVEGTEEE--VEGTEEEVEGTEEEVEGTEEEVEGTEEEVEGTEEE 394
Query: 242 PE-EENDMVESAEEDPEE-ENDMV 263
E E++ VE E+D + +ND V
Sbjct: 395 VEGTEDEEVEGTEKDSSQFDNDRV 418
Score = 40.0 bits (92), Expect = 0.034
Identities = 26/80 (32%), Positives = 41/80 (50%), Gaps = 3/80 (3%)
Query: 210 SEEDPEQENDIVESEEEDLEKENDMVESAEEDPEEENDMVESAEEDPEEENDMVESAEED 269
+EE+ E + VE EE++E + VE E+ EE + E E EEE + E E
Sbjct: 182 TEEEVEGTEEEVEGTEEEVEGTEEEVEGTED---EEVEGTEEEVEGTEEEVEGTEEEVEG 238
Query: 270 PEEENDKSDGEGVLNLDEEQ 289
EEE + ++ E V ++E+
Sbjct: 239 TEEEVEGTEDEEVEGTEDEE 258
Score = 38.9 bits (89), Expect = 0.076
Identities = 26/86 (30%), Positives = 50/86 (57%), Gaps = 10/86 (11%)
Query: 208 VESEEDPEQENDIVESEEEDLEKENDM--VESAEEDPEEENDMVESAEEDPEEENDMVES 265
+ +EE PE+E+++ E+ LE E + VE E +EE+ ++E+ +ED +++E
Sbjct: 490 IPAEEIPEEEDEL---PEDALETEVAVWGVEEEGEADDEEDVLLEAQQED-----ELLEE 541
Query: 266 AEEDPEEENDKSDGEGVLNLDEEQDI 291
+E+ +EE D+ D E +EE ++
Sbjct: 542 EDEELDEEEDELDEEEEEPKEEEDEL 567
Score = 38.9 bits (89), Expect = 0.076
Identities = 43/197 (21%), Positives = 76/197 (37%), Gaps = 63/197 (31%)
Query: 157 EAVKRDTDLTKSKDVHTTKKLKVIVESEENPEQENDIVESEEEDPEEENDIVESEEDPEQ 216
E + + + T+ + T ++++ E E E+E + E E E EEE + E E + +
Sbjct: 340 EGTEEEVEGTEEEVEGTEEEVEGTEEEVEGTEEEVEGTEEEVEGTEEEVEGTEEEVEGTE 399
Query: 217 ENDIVESEEEDLEKENDMV-------------------------ESAEEDPEEEND---- 247
+ ++ +E++ + +ND V EED +++ D
Sbjct: 400 DEEVEGTEKDSSQFDNDRVTLLLRPKPRNPLDIQRLIYQHQKYESELEEDDDDDEDVFAP 459
Query: 248 --MVES--------------------------AEEDPEEENDMVESAEEDP------EEE 273
M+E AEE PEEE+++ E A E EEE
Sbjct: 460 QKMLEDLFSELVWSPRIWHPWDFLLDCEAEIPAEEIPEEEDELPEDALETEVAVWGVEEE 519
Query: 274 NDKSDGEGVLNLDEEQD 290
+ D E VL +++D
Sbjct: 520 GEADDEEDVLLEAQQED 536
Score = 36.2 bits (82), Expect = 0.49
Identities = 23/95 (24%), Positives = 48/95 (50%), Gaps = 7/95 (7%)
Query: 160 KRDTDLTKSKDVHTTKKLKVIVESEENPEQENDIV------ESEEEDPEEENDIVESEED 213
+++ +L + +D ++ + E EE P++E D + E EEE+ EEE+++ E++ +
Sbjct: 533 QQEDELLEEEDEELDEEEDELDEEEEEPKEEEDELHEEEEEEEEEEEEEEEDELQENDSE 592
Query: 214 PEQENDIVESEEEDLEKENDMVESAEEDPEEENDM 248
+ I+ K+ D+ E PEE ++
Sbjct: 593 FFRVKPIIPRHRWIFRKKKDVFEVLSY-PEEATEI 626
Score = 34.3 bits (77), Expect = 1.9
Identities = 36/139 (25%), Positives = 64/139 (45%), Gaps = 20/139 (14%)
Query: 157 EAVKRDTDLTKSKDVHTTKKL-----KVIVESEENPEQENDIVESEEEDPEEENDIVESE 211
E + + + T+ ++V T++ + + +EE E + VE EE+ E +E
Sbjct: 325 EGTEEEVEGTEDEEVEGTEEEVEGTEEEVEGTEEEVEGTEEEVEGTEEEVE------GTE 378
Query: 212 EDPEQENDIVESEEEDLE-KENDMVESAEEDPEE-ENDMVESAEEDPEEENDM------V 263
E+ E + VE EE++E E++ VE E+D + +ND V P+ N +
Sbjct: 379 EEVEGTEEEVEGTEEEVEGTEDEEVEGTEKDSSQFDNDRVTLLLR-PKPRNPLDIQRLIY 437
Query: 264 ESAEEDPEEENDKSDGEGV 282
+ + + E E D D E V
Sbjct: 438 QHQKYESELEEDDDDDEDV 456
Score = 33.9 bits (76), Expect = 2.4
Identities = 34/115 (29%), Positives = 59/115 (50%), Gaps = 20/115 (17%)
Query: 195 ESEEEDPEEENDIVESEEDPEQENDIVESEEE----DLEKENDMVESAEEDPEEENDMVE 250
E EE+D ++E+ + + +++V S D + + AEE PEEE+++ E
Sbjct: 445 ELEEDDDDDEDVFAPQKMLEDLFSELVWSPRIWHPWDFLLDCEAEIPAEEIPEEEDELPE 504
Query: 251 SA----------EEDPE---EENDMVESAEEDP--EEENDKSDGEGVLNLDEEQD 290
A EE+ E EE+ ++E+ +ED EEE+++ D E LDEE++
Sbjct: 505 DALETEVAVWGVEEEGEADDEEDVLLEAQQEDELLEEEDEELDEEED-ELDEEEE 558
>VG48_SHV21 (Q01033) Hypothetical gene 48 protein
Length = 797
Score = 62.4 bits (150), Expect = 6e-09
Identities = 52/160 (32%), Positives = 81/160 (50%), Gaps = 10/160 (6%)
Query: 138 SFDITPSENDVLCHMALISEAVKRDT---DLTKSKDVHTTKKLKVIVESEENPEQENDI- 193
S D SE+ LC + SE+V LT K + + K+I +S++ +++ D
Sbjct: 346 SDDEVDSEDGNLCVLDDESESVNSVALRQVLTVDKQANEKEYKKIIDKSDDRDDRDKDEY 405
Query: 194 -VESEEEDPEEENDIVESEEDPEQENDIVESEEEDLEKENDMVESAEEDPEEENDMVESA 252
+E+EE + +EE D E EED + E + E E +D E E E ED +E D +
Sbjct: 406 ELENEEYNRDEEEDEGEDEEDEKDEKEEGEDEGDDGEDEG---EDEGEDEGDEGDEGDEG 462
Query: 253 EEDPEEENDMVESAEEDPEEENDKSDGEGVLNLDEEQDIG 292
E++ E+E+D E ED +E D+ + EG DE +D G
Sbjct: 463 EDEGEDEDD-EEDEGEDEGDEGDEGEDEGDEG-DEGEDEG 500
Score = 57.4 bits (137), Expect = 2e-07
Identities = 36/111 (32%), Positives = 57/111 (50%), Gaps = 3/111 (2%)
Query: 182 ESEENPEQENDIVESEEEDPEEENDIVESEEDPEQENDIVESEEEDLEKENDMVESAEED 241
E +E ++ D + E++ E+E D E E++ E E D E E ED E D E ++
Sbjct: 564 EGDEGEDEGEDEGDEGEDEGEDEGD--EGEDEGEDEGDEGEDEGEDEGDEGDEGEDEGDE 621
Query: 242 PEEENDMVESAEEDPEEENDMVESAEEDPEEENDKSDGEGVLNLDEEQDIG 292
E+E D E ++ E+E D E ++ E+E D+ + EG DE +D G
Sbjct: 622 GEDEGDEGEDEGDEGEDEGDEGEDEGDEGEDEGDEGEDEGDEG-DEGEDEG 671
Score = 57.0 bits (136), Expect = 3e-07
Identities = 35/111 (31%), Positives = 57/111 (50%), Gaps = 1/111 (0%)
Query: 182 ESEENPEQENDIVESEEEDPEEENDIVESEEDPEQENDIVESEEEDLEKENDMVESAEED 241
E E+ E E D E E ++ E+E D E E + E + E E+E E E++ + +E
Sbjct: 531 EGEDEWEDEGDEGEDEGDEGEDEGDEGEDEGEDEGDEGEDEGEDEGDEGEDEGEDEGDEG 590
Query: 242 PEEENDMVESAEEDPEEENDMVESAEEDPEEENDKSDGEGVLNLDEEQDIG 292
+E D + E++ E+E D + E++ +E D+ D EG DE +D G
Sbjct: 591 EDEGEDEGDEGEDEGEDEGDEGDEGEDEGDEGEDEGD-EGEDEGDEGEDEG 640
Score = 56.2 bits (134), Expect = 5e-07
Identities = 39/122 (31%), Positives = 58/122 (46%), Gaps = 9/122 (7%)
Query: 182 ESEENPEQENDIVESEEEDPEEENDIVESEEDP--------EQENDIVESEEEDLEKEND 233
E E+ E E D E E ED +E D E E D E E D E E ++ E E D
Sbjct: 589 EGEDEGEDEGDEGEDEGEDEGDEGDEGEDEGDEGEDEGDEGEDEGDEGEDEGDEGEDEGD 648
Query: 234 MVESAEEDPEEENDMVESAEEDPEEENDMVESAEEDPEEENDKSDG-EGVLNLDEEQDIG 292
E ++ E+E D + E++ +E D + E++ +E ++ +G EG DE +D G
Sbjct: 649 EGEDEGDEGEDEGDEGDEGEDEGDEGEDEGDEGEDEGDEGDEGDEGDEGDEGEDEGEDEG 708
Query: 293 YD 294
D
Sbjct: 709 ED 710
Score = 55.8 bits (133), Expect = 6e-07
Identities = 37/111 (33%), Positives = 56/111 (50%), Gaps = 9/111 (8%)
Query: 182 ESEENPEQENDIVESEEEDPEEENDIVESEEDPEQENDIVESEEEDLEKENDMVESAEED 241
E +E ++ D + E++ E+E D E E++ E E D E E ED E D E ED
Sbjct: 553 EGDEGEDEGEDEGDEGEDEGEDEGD--EGEDEGEDEGDEGEDEGED---EGDEGEDEGED 607
Query: 242 PEEENDMVESAEEDPEEENDMVESAEEDPEEENDKSDGEGVLNLDEEQDIG 292
+E D E ++ E+E D E ++ E+E D+ + EG DE +D G
Sbjct: 608 EGDEGDEGEDEGDEGEDEGDEGEDEGDEGEDEGDEGEDEG----DEGEDEG 654
Score = 55.5 bits (132), Expect = 8e-07
Identities = 36/118 (30%), Positives = 59/118 (49%), Gaps = 9/118 (7%)
Query: 182 ESEENPEQENDIVESEEEDPEEENDIVESEEDPEQENDIVESEEEDLEKENDMVESAEED 241
E E+ E E+D EE++ E+E D + ED E D E E ++ ++ D + +E
Sbjct: 461 EGEDEGEDEDD----EEDEGEDEGDEGDEGEDEGDEGDEGEDEGDEGDEGKDEGDEGDEG 516
Query: 242 PEE-----ENDMVESAEEDPEEENDMVESAEEDPEEENDKSDGEGVLNLDEEQDIGYD 294
+E E D + E++ E+E D E ++ E+E D+ + EG DE +D G D
Sbjct: 517 KDEGDEGDEGDEGDEGEDEWEDEGDEGEDEGDEGEDEGDEGEDEGEDEGDEGEDEGED 574
Score = 53.1 bits (126), Expect = 4e-06
Identities = 36/111 (32%), Positives = 55/111 (49%), Gaps = 3/111 (2%)
Query: 182 ESEENPEQENDIVESEEEDPEEENDIVESEEDPEQENDIVESEEEDLEKENDMVESAEED 241
E E+ E E D E E+E +E ++ + ED E D E E ++ E E D E ++
Sbjct: 578 EGEDEGEDEGD--EGEDEGEDEGDEGEDEGEDEGDEGDEGEDEGDEGEDEGDEGEDEGDE 635
Query: 242 PEEENDMVESAEEDPEEENDMVESAEEDPEEENDKSDGEGVLNLDEEQDIG 292
E+E D E ++ E+E D E ++ +E D+ D EG DE +D G
Sbjct: 636 GEDEGDEGEDEGDEGEDEGDEGEDEGDEGDEGEDEGD-EGEDEGDEGEDEG 685
Score = 53.1 bits (126), Expect = 4e-06
Identities = 36/114 (31%), Positives = 58/114 (50%), Gaps = 7/114 (6%)
Query: 182 ESEENPEQENDIVESEE-EDPEEENDIVESEEDPEQENDIVESEEEDLEKENDMVESAEE 240
E +E E E++ E +E +D +E D + E D E D + E++ E E D E +
Sbjct: 489 EGDEGDEGEDEGDEGDEGKDEGDEGDEGKDEGDEGDEGDEGDEGEDEWEDEGDEGEDEGD 548
Query: 241 DPEEENDMVESAEEDPEEENDMVESAEEDPEEENDKSDGEGVLNLDEEQDIGYD 294
+ E+E D E++ E+E D E++ E+E D+ + EG DE +D G D
Sbjct: 549 EGEDEGD---EGEDEGEDEGD---EGEDEGEDEGDEGEDEGEDEGDEGEDEGED 596
Score = 52.8 bits (125), Expect = 5e-06
Identities = 39/141 (27%), Positives = 61/141 (42%), Gaps = 2/141 (1%)
Query: 154 LISEAVKRDTDLTKSKDVHTTKKLKVIVESEENPEQENDIVESEEEDPEEENDIVESEED 213
L +E RD + + +D K K E E+ + D E E ED +E D + ED
Sbjct: 407 LENEEYNRDEEEDEGEDEEDEKDEKE--EGEDEGDDGEDEGEDEGEDEGDEGDEGDEGED 464
Query: 214 PEQENDIVESEEEDLEKENDMVESAEEDPEEENDMVESAEEDPEEENDMVESAEEDPEEE 273
++ D E E ED E D E ++ +E D + +E +E ++ E +E E +
Sbjct: 465 EGEDEDDEEDEGEDEGDEGDEGEDEGDEGDEGEDEGDEGDEGKDEGDEGDEGKDEGDEGD 524
Query: 274 NDKSDGEGVLNLDEEQDIGYD 294
EG ++E D G D
Sbjct: 525 EGDEGDEGEDEWEDEGDEGED 545
Score = 50.4 bits (119), Expect = 3e-05
Identities = 35/117 (29%), Positives = 57/117 (47%), Gaps = 4/117 (3%)
Query: 182 ESEENPEQENDIVESEE-EDPEEENDIVESEEDPEQENDIVESEEEDLEKENDMVESAEE 240
E +E E E++ E +E ED +E D E E D E E ++ + E D + +E
Sbjct: 469 EDDEEDEGEDEGDEGDEGEDEGDEGDEGEDEGDEGDEGKDEGDEGDEGKDEGDEGDEGDE 528
Query: 241 DPEEEN---DMVESAEEDPEEENDMVESAEEDPEEENDKSDGEGVLNLDEEQDIGYD 294
E E+ D + E++ +E D + E++ E+E D+ + EG DE +D G D
Sbjct: 529 GDEGEDEWEDEGDEGEDEGDEGEDEGDEGEDEGEDEGDEGEDEGEDEGDEGEDEGED 585
Score = 49.7 bits (117), Expect = 4e-05
Identities = 30/106 (28%), Positives = 55/106 (51%), Gaps = 3/106 (2%)
Query: 182 ESEENPEQENDIVESEEEDPEEENDIVESEEDPEQENDIVESEEEDLEKENDMVESAEED 241
E +E E +++ E +E D +E + +E E E++ E E+E E E++ + +E
Sbjct: 509 EGDEGDEGKDEGDEGDEGDEGDEGEDEWEDEGDEGEDEGDEGEDEGDEGEDEGEDEGDEG 568
Query: 242 PEEENDMVESAEEDPEEENDMVESAEEDPEEENDKSDGEGVLNLDE 287
+E D + E++ E+E D E++ E+E D+ + EG DE
Sbjct: 569 EDEGEDEGDEGEDEGEDEGD---EGEDEGEDEGDEGEDEGEDEGDE 611
Score = 48.5 bits (114), Expect = 1e-04
Identities = 36/121 (29%), Positives = 55/121 (44%), Gaps = 10/121 (8%)
Query: 182 ESEENPEQENDIVESEEEDPEEENDIVESEEDPEQENDIVESE---------EEDLEKEN 232
E E++ E E + E ++ E+E D + ED E D + E E D E
Sbjct: 467 EDEDDEEDEGEDEGDEGDEGEDEGDEGDEGEDEGDEGDEGKDEGDEGDEGKDEGDEGDEG 526
Query: 233 DMVESAEEDPEEENDMVESAEEDPEEENDMVESAEEDPEEEN-DKSDGEGVLNLDEEQDI 291
D + E++ E+E D E ++ E+E D E ED +E D+ + EG DE +D
Sbjct: 527 DEGDEGEDEWEDEGDEGEDEGDEGEDEGDEGEDEGEDEGDEGEDEGEDEGDEGEDEGEDE 586
Query: 292 G 292
G
Sbjct: 587 G 587
Score = 48.1 bits (113), Expect = 1e-04
Identities = 31/100 (31%), Positives = 49/100 (49%), Gaps = 6/100 (6%)
Query: 188 EQENDIVESEEEDPEEENDIVESEEDP-EQENDIVESEEEDLEKENDMVESAEEDPEEEN 246
E E D E E ++ E+E D E E D E E D E E ++ E E D + E++ +E
Sbjct: 616 EDEGDEGEDEGDEGEDEGDEGEDEGDEGEDEGDEGEDEGDEGEDEGDEGDEGEDEGDEGE 675
Query: 247 DMVESAEEDPEE-----ENDMVESAEEDPEEENDKSDGEG 281
D + E++ +E E D + E++ E+E + EG
Sbjct: 676 DEGDEGEDEGDEGDEGDEGDEGDEGEDEGEDEGEDEGDEG 715
Score = 46.2 bits (108), Expect = 5e-04
Identities = 37/116 (31%), Positives = 55/116 (46%), Gaps = 11/116 (9%)
Query: 182 ESEENPEQENDIVESEEEDPEEENDIVESEEDP-EQENDIVESEEEDLEKENDMVESAEE 240
+ E + E D + E++ E+E D E E D E E D E E ED E + + E+
Sbjct: 517 KDEGDEGDEGDEGDEGEDEWEDEGDEGEDEGDEGEDEGDEGEDEGEDEGDEGE--DEGED 574
Query: 241 DPEEENDMVE----SAEEDPEEENDMVESAEEDPEEENDKSDGEGVLNLDEEQDIG 292
+ +E D E E++ E+E D E ED +E D+ + EG DE +D G
Sbjct: 575 EGDEGEDEGEDEGDEGEDEGEDEGDEGEDEGEDEGDEGDEGEDEG----DEGEDEG 626
Score = 40.8 bits (94), Expect = 0.020
Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 8/96 (8%)
Query: 188 EQENDIVESEEEDPEEENDIVESE----EDPEQENDIVESEEEDLEKENDMVESAEEDPE 243
E E D E E ++ E+E D E E ED E D E E ++ E E D ED
Sbjct: 630 EDEGDEGEDEGDEGEDEGDEGEDEGDEGEDEGDEGDEGEDEGDEGEDEGD----EGEDEG 685
Query: 244 EENDMVESAEEDPEEENDMVESAEEDPEEENDKSDG 279
+E D + +E E E++ + E++ +E +G
Sbjct: 686 DEGDEGDEGDEGDEGEDEGEDEGEDEGDEGTKDKEG 721
Score = 39.7 bits (91), Expect = 0.044
Identities = 30/91 (32%), Positives = 44/91 (47%), Gaps = 4/91 (4%)
Query: 188 EQENDIVESEEEDPEEENDIVESE--EDPEQENDIVESEEEDLEKENDMVESAEEDPEEE 245
E E D E E ++ E+E D E E E E E++ E E+E E E++ E E D +E
Sbjct: 637 EDEGDEGEDEGDEGEDEGDEGEDEGDEGDEGEDEGDEGEDEGDEGEDEGDEGDEGDEGDE 696
Query: 246 NDMVESAEEDPEEENDMVESAEEDPEEENDK 276
D E +E +E D + +D E +K
Sbjct: 697 GD--EGEDEGEDEGEDEGDEGTKDKEGNANK 725
>MYT1_HUMAN (Q01538) Myelin transcription factor 1 (MYT1) (MYTI)
(Proteolipid protein binding protein) (PLPB1)
Length = 1121
Score = 60.8 bits (146), Expect = 2e-08
Identities = 50/181 (27%), Positives = 82/181 (44%), Gaps = 27/181 (14%)
Query: 122 EESRASILVKVLKEFSSFDITPSENDVLCHMALISEAVKRDTDLTKSKDVHTTKKLKVIV 181
EE + ++ ++T + LC +L A + + K K I+
Sbjct: 208 EEGEKGLFIQPEDAEEVVEVTTERSQDLCPQSLEDAASEESS------------KQKGIL 255
Query: 182 ESEENPEQENDIVESEEEDPEEENDIVESEEDPEQENDIVESEEEDLEKENDMVESAEED 241
EE E+E + E EEED EEE E EE+ E+E + E EEE+ E+E + E+A +
Sbjct: 256 SHEEEDEEEEEEEEEEEEDEEEE----EEEEEEEEEEEEEEEEEEEEEEEEEEEEAAPDV 311
Query: 242 PEEENDMVESAEEDPE-----------EENDMVESAEEDPEEENDKSDGEGVLNLDEEQD 290
+E+ SA++ PE E + +VE +D ++E+ S V + E QD
Sbjct: 312 IFQEDTSHTSAQKAPELRGPESPSPKPEYSVIVEVRSDDDKDEDTHSRKSTVTDESEMQD 371
Query: 291 I 291
+
Sbjct: 372 M 372
Score = 60.5 bits (145), Expect = 2e-08
Identities = 38/113 (33%), Positives = 57/113 (49%), Gaps = 1/113 (0%)
Query: 183 SEENPEQENDIVESEEEDPEEENDIVESEEDPEQENDIVESEEEDLEKENDMVESAEEDP 242
SEE+ +Q+ I+ EEED EEE + E EED E+E + E EEE+ E+E + E EE+
Sbjct: 245 SEESSKQKG-ILSHEEEDEEEEEEEEEEEEDEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 303
Query: 243 EEENDMVESAEEDPEEENDMVESAEEDPEEENDKSDGEGVLNLDEEQDIGYDT 295
EEE +ED + PE + K + ++ + + D DT
Sbjct: 304 EEEAAPDVIFQEDTSHTSAQKAPELRGPESPSPKPEYSVIVEVRSDDDKDEDT 356
Score = 50.1 bits (118), Expect = 3e-05
Identities = 28/99 (28%), Positives = 51/99 (51%), Gaps = 7/99 (7%)
Query: 201 PEEENDIVESEEDPEQE---NDIVESEEEDLEKENDMVESAEEDPEEENDMVESAEEDPE 257
PE+ ++VE + Q+ + ++ E+ K+ ++ EED EEE + E E++ E
Sbjct: 218 PEDAEEVVEVTTERSQDLCPQSLEDAASEESSKQKGILSHEEEDEEEEEEEEEEEEDEEE 277
Query: 258 EENDMVESAEEDPEEENDKSDGEGVLNLDEEQDIGYDTV 296
EE E EE+ EEE ++ + E +EE++ D +
Sbjct: 278 EE----EEEEEEEEEEEEEEEEEEEEEEEEEEEAAPDVI 312
>S521_HUMAN (Q96MU7) Putative splicing factor YT521
Length = 727
Score = 60.5 bits (145), Expect = 2e-08
Identities = 50/171 (29%), Positives = 79/171 (45%), Gaps = 16/171 (9%)
Query: 160 KRDTDL-TKSKDVHTTKKLKVIVESEENPEQENDIVESEEEDPEEENDIVESEEDPEQEN 218
KRD + KS ++++ + V+ + ++ E E+ +++ S EQ N
Sbjct: 137 KRDPERRAKSPTPDGSERIGLEVDRRASRSSQSSKEEVNSEEYGSDHETGSSGSSDEQGN 196
Query: 219 DIVESEE---EDLEKENDMVESAEEDPEEENDMVESAEEDPEEENDMVESAEEDPEEEND 275
+ EE ED+E++ ++ E AEED E + D E EE+ EEE E EE+ E E D
Sbjct: 197 NTENEEEGVEEDVEEDEEVEEDAEEDEEVDEDGEEEEEEEEEEEE---EEEEEEEEYEQD 253
Query: 276 KSDGEGVLNLDEEQDIGYDTVCAICDNGGEILPCEGRCLRSFHATLEDGRD 326
+ D +E+ YDT D+G E + +RS T DG D
Sbjct: 254 ERD-------QKEEGNDYDTRSEASDSGSESVSFTDGSVRSGSGT--DGSD 295
Score = 51.6 bits (122), Expect = 1e-05
Identities = 36/128 (28%), Positives = 59/128 (45%), Gaps = 2/128 (1%)
Query: 156 SEAVKRDTDLTKSKDVHTTKKLKVIVESEENPEQENDIVESEEEDPEEENDIVESEEDPE 215
SE + + D S+ ++K+ +V E + + S+E+ EN+ EED E
Sbjct: 152 SERIGLEVDRRASRSSQSSKE-EVNSEEYGSDHETGSSGSSDEQGNNTENEEEGVEEDVE 210
Query: 216 QENDIVESEEEDLEKEND-MVESAEEDPEEENDMVESAEEDPEEENDMVESAEEDPEEEN 274
++ ++ E EED E + D E EE+ EEE + E E + +E + E + D E
Sbjct: 211 EDEEVEEDAEEDEEVDEDGEEEEEEEEEEEEEEEEEEEEYEQDERDQKEEGNDYDTRSEA 270
Query: 275 DKSDGEGV 282
S E V
Sbjct: 271 SDSGSESV 278
Score = 49.7 bits (117), Expect = 4e-05
Identities = 35/134 (26%), Positives = 57/134 (42%), Gaps = 2/134 (1%)
Query: 156 SEAVKRDTDLTKSKDVHTTKKLKVIVESEENPEQENDIVESEEEDPEEENDIVESEEDPE 215
S++ K + + + H T E N E E + VE + E+ EE + ++EED E
Sbjct: 167 SQSSKEEVNSEEYGSDHETGSSGSSDEQGNNTENEEEGVEEDVEEDEEVEE--DAEEDEE 224
Query: 216 QENDIVESEEEDLEKENDMVESAEEDPEEENDMVESAEEDPEEENDMVESAEEDPEEEND 275
+ D E EEE+ E+E + E EE ++E D E + +E +
Sbjct: 225 VDEDGEEEEEEEEEEEEEEEEEEEEYEQDERDQKEEGNDYDTRSEASDSGSESVSFTDGS 284
Query: 276 KSDGEGVLNLDEEQ 289
G G DE++
Sbjct: 285 VRSGSGTDGSDEKK 298
>ECX1_METMA (Q8PTT8) Probable exosome complex exonuclease 1 (EC
3.1.13.-)
Length = 493
Score = 60.1 bits (144), Expect = 3e-08
Identities = 46/134 (34%), Positives = 70/134 (51%), Gaps = 13/134 (9%)
Query: 157 EAVKRDTDLTKSKDVHTTKKLKVIVESEENPEQENDIVESEEEDPEE-ENDIVESEEDPE 215
E V +T K + + V EE PE+ E E E EE E +I+ SE P+
Sbjct: 242 EEVSEETAPEKGAEKEVLEPSPVAAIVEETPEEAE---EPEVEISEEVEAEILASEVIPD 298
Query: 216 QENDIVESEEEDLEKENDMVESAEEDPEEENDMVESAEEDPEEENDMVESAEEDPEEEND 275
E+++ E EE+LE+ + +E+ EE+ EE E+ EE+ E E D+ E EED EE +
Sbjct: 299 FEDELEEEIEEELEESEEDLETEEEEFEE-----EALEEEAEPEEDLEEDLEEDLGEELE 353
Query: 276 KSDGEGVLNLDEEQ 289
+ + E L+EE+
Sbjct: 354 EEEEE----LEEEE 363
Score = 57.0 bits (136), Expect = 3e-07
Identities = 39/120 (32%), Positives = 68/120 (56%), Gaps = 8/120 (6%)
Query: 155 ISEAVKRDTDLTKSKDVHTTKKLKV-IVESEENPEQENDIVESEEEDPEEENDIVESEED 213
++ V+ + + +V +++++ I+ SE P+ E+++ E EE+ EE + +E+EE+
Sbjct: 264 VAAIVEETPEEAEEPEVEISEEVEAEILASEVIPDFEDELEEEIEEELEESEEDLETEEE 323
Query: 214 PEQENDIVESEEEDLEKENDMVESAEEDPEEENDMVESAEEDPEEENDMVESAEEDPEEE 273
+E E+ EE+ E E D+ E EED EE +E EE+ EEE E+ EE+ E E
Sbjct: 324 EFEE----EALEEEAEPEEDLEEDLEEDLGEE---LEEEEEELEEEEFEEEALEEETELE 376
Score = 55.8 bits (133), Expect = 6e-07
Identities = 43/124 (34%), Positives = 65/124 (51%), Gaps = 17/124 (13%)
Query: 182 ESEENPEQENDIVESEEEDPEEENDIVESEEDPEQENDIVESEEEDLEKENDMVESAE-- 239
E EE E+ + +E+EEE+ EEE E+E + + E D+ E E+LE+E + +E E
Sbjct: 306 EIEEELEESEEDLETEEEEFEEEALEEEAEPEEDLEEDLEEDLGEELEEEEEELEEEEFE 365
Query: 240 -EDPEEENDMVESAEEDPE-----------EENDMVESAEEDPEEENDKSDGEGVLNLDE 287
E EEE ++ S E PE E+ D AEE+ E E +++ EG L+E
Sbjct: 366 EEALEEETELEASLECAPELKEFDEIEARLEKEDASIEAEEEIEPEAEEATEEG---LEE 422
Query: 288 EQDI 291
E +I
Sbjct: 423 EAEI 426
Score = 51.6 bits (122), Expect = 1e-05
Identities = 54/174 (31%), Positives = 85/174 (48%), Gaps = 22/174 (12%)
Query: 122 EESRASILVKVLKEFSSFDITPSENDVLCHMALISEAVKRDTDLTKSKDVHTTKKLKVIV 181
EE I +V E + ++ P D L + E + + DL ++ + L+
Sbjct: 276 EEPEVEISEEVEAEILASEVIPDFEDEL-EEEIEEELEESEEDLETEEEEFEEEALEEEA 334
Query: 182 ESEENPEQ--ENDI---VESEEEDPEEENDIVES-EEDPEQENDI--------VESEEED 227
E EE+ E+ E D+ +E EEE+ EEE E+ EE+ E E + + E
Sbjct: 335 EPEEDLEEDLEEDLGEELEEEEEELEEEEFEEEALEEETELEASLECAPELKEFDEIEAR 394
Query: 228 LEKENDMVESAEE-DPEEENDMVESAEEDPEEENDMVESAEEDPEEENDKSDGE 280
LEKE+ +E+ EE +PE E E+ EE EEE ++ E+A EEEN +++ E
Sbjct: 395 LEKEDASIEAEEEIEPEAE----EATEEGLEEEAEIEETAAS--EEENIEAEAE 442
Score = 49.3 bits (116), Expect = 6e-05
Identities = 43/150 (28%), Positives = 72/150 (47%), Gaps = 30/150 (20%)
Query: 155 ISEAVKRDTDLTKSKDVHTTKKLKVIVESEENPEQENDIVESEEEDP------------- 201
+ E + + DL + + ++L+ E EE E+E E+ EE+
Sbjct: 330 LEEEAEPEEDLEEDLEEDLGEELE---EEEEELEEEEFEEEALEEETELEASLECAPELK 386
Query: 202 ---------EEENDIVESEEDPEQENDIVESEEEDLEKENDMVESA---EEDPEEENDMV 249
E+E+ +E+EE+ E E + E+ EE LE+E ++ E+A EE+ E E +
Sbjct: 387 EFDEIEARLEKEDASIEAEEEIEPEAE--EATEEGLEEEAEIEETAASEEENIEAEAEAE 444
Query: 250 ESAEEDPEEENDMVESAEEDPEEENDKSDG 279
E AE + E E E+ E + E E +KS+G
Sbjct: 445 EEAEPEVEAEEISTEAEEAEEEPEEEKSEG 474
Score = 46.2 bits (108), Expect = 5e-04
Identities = 42/136 (30%), Positives = 65/136 (46%), Gaps = 26/136 (19%)
Query: 157 EAVKRDTDLTKSKDVHTTKKLKVIVESEENPEQENDIVESEEE-----------DPEEEN 205
EA++ +T+L S + +LK E E E+E+ +E+EEE EEE
Sbjct: 367 EALEEETELEAS--LECAPELKEFDEIEARLEKEDASIEAEEEIEPEAEEATEEGLEEEA 424
Query: 206 DIVESEEDPEQENDIVESEEEDLEKENDMVESAEEDPEEE--NDMVESAEEDPEEE-NDM 262
+I E+ SEEE++E E + E AE + E E + E AEE+PEEE ++
Sbjct: 425 EIEET----------AASEEENIEAEAEAEEEAEPEVEAEEISTEAEEAEEEPEEEKSEG 474
Query: 263 VESAEEDPEEENDKSD 278
+DP E + +
Sbjct: 475 PWKVVKDPSEAGTRGE 490
Score = 43.1 bits (100), Expect = 0.004
Identities = 31/89 (34%), Positives = 41/89 (45%), Gaps = 3/89 (3%)
Query: 182 ESEENPEQENDIVESEEEDPEEENDIVESEEDPEQENDIVESEEEDLEKE--NDMVESAE 239
E E PE E E EE+ E E EE+ E E + E E ++E E + E AE
Sbjct: 405 EEEIEPEAEEATEEGLEEEAEIEETAASEEENIEAEAEAEEEAEPEVEAEEISTEAEEAE 464
Query: 240 EDPEEE-NDMVESAEEDPEEENDMVESAE 267
E+PEEE ++ +DP E E E
Sbjct: 465 EEPEEEKSEGPWKVVKDPSEAGTRGEKDE 493
Score = 42.0 bits (97), Expect = 0.009
Identities = 37/120 (30%), Positives = 58/120 (47%), Gaps = 7/120 (5%)
Query: 175 KKLKVIVESEENPEQENDIVESEEEDPEEENDIVESEEDPEQENDIVESEEEDLE-KEND 233
KK + VE E E +P IVE + +E ++ SEE + E ++
Sbjct: 235 KKFETPVEEVSEETAPEKGAEKEVLEPSPVAAIVEETPEEAEEPEVEISEEVEAEILASE 294
Query: 234 MVESAEEDPEEE-NDMVESAEEDPEEENDMVESAEEDPEEENDKSDGEGVLNLDEEQDIG 292
++ E++ EEE + +E +EED E E + E EE EEE ++ E L D E+D+G
Sbjct: 295 VIPDFEDELEEEIEEELEESEEDLETEEEEFE--EEALEEE---AEPEEDLEEDLEEDLG 349
Score = 34.3 bits (77), Expect = 1.9
Identities = 31/124 (25%), Positives = 50/124 (40%), Gaps = 18/124 (14%)
Query: 133 LKEFSSFDITPSENDVLCHMALISEAVKRDTDLTKSKDVHTTKKLKVIVESEENPEQEND 192
LKEF + + D +++ + ++ + T + L+ E EE E +
Sbjct: 385 LKEFDEIEARLEKEDA---------SIEAEEEIEPEAEEATEEGLEEEAEIEETAASEEE 435
Query: 193 IVESEEEDPEEENDIVESEEDPEQENDIVESEEEDLEKENDMVE---SAEEDPEEENDMV 249
+E+E E EE VE+EE E+EE + E E + E +DP E
Sbjct: 436 NIEAEAEAEEEAEPEVEAEEIS------TEAEEAEEEPEEEKSEGPWKVVKDPSEAGTRG 489
Query: 250 ESAE 253
E E
Sbjct: 490 EKDE 493
>GAR2_SCHPO (P41891) Protein gar2
Length = 500
Score = 59.7 bits (143), Expect = 4e-08
Identities = 47/156 (30%), Positives = 69/156 (44%), Gaps = 15/156 (9%)
Query: 131 KVLKEFSSFDITPSENDVLCHMALISEAVKRDTDLTKSKDVHTTKKLKVIVESEENPEQE 190
++ K+ S D++P ++ EA + + K V KK K ES E E
Sbjct: 39 EIAKQSSKTDVSPKKSK--------KEAKRASSPEPSKKSVKKQKKSKKKEESSSESESE 90
Query: 191 NDIVESEEEDPEEENDIVESEEDPEQENDIVESEEEDLEKENDMVESAEE-----DPEEE 245
+ ESE E E+ ESE E+ ESEEE + K + ES+ E + EEE
Sbjct: 91 SSSSESESSSSESESSSSESESS-SSESSSSESEEEVIVKTEEKKESSSESSSSSESEEE 149
Query: 246 NDMVESAEEDPEEEND-MVESAEEDPEEENDKSDGE 280
+ V EE E +D ES+ + E E+ S+ E
Sbjct: 150 EEAVVKIEEKKESSSDSSSESSSSESESESSSSESE 185
Score = 57.8 bits (138), Expect = 2e-07
Identities = 45/172 (26%), Positives = 82/172 (47%), Gaps = 9/172 (5%)
Query: 121 PEESRASILV----KVLKEFSSFDITPSENDVLCHMALISEAVKRDTDLTKSKDVHTTKK 176
PE S+ S+ K +E SS + S + + SE+ +++ + S+ + +
Sbjct: 64 PEPSKKSVKKQKKSKKKEESSSESESESSSSESESSSSESESSSSESESSSSESSSSESE 123
Query: 177 LKVIVESEENPEQENDIVESEEEDPEEENDIVESEEDPEQENDIVESEEEDLEKENDMVE 236
+VIV++EE E ++ S E + EEE +V+ EE E +D SE E E+ E
Sbjct: 124 EEVIVKTEEKKESSSESSSSSESE-EEEEAVVKIEEKKESSSD-SSSESSSSESES---E 178
Query: 237 SAEEDPEEENDMVESAEEDPEEENDMVESAEEDPEEENDKSDGEGVLNLDEE 288
S+ + EEE ++VE EE E ++ +E + ++ D + + + E
Sbjct: 179 SSSSESEEEEEVVEKTEEKKEGSSESSSDSESSSDSSSESGDSDSSSDSESE 230
Score = 48.1 bits (113), Expect = 1e-04
Identities = 31/146 (21%), Positives = 68/146 (46%), Gaps = 9/146 (6%)
Query: 135 EFSSFDITPSENDVLCHMALISEAVKRDTDLTKSKDVHTTKKLKVIVESEENPEQENDIV 194
E SS + + SE++ ++ K+++ S + ++ + +V+ EE E +D
Sbjct: 111 ESSSSESSSSESE---EEVIVKTEEKKESSSESSSSSESEEEEEAVVKIEEKKESSSD-- 165
Query: 195 ESEEEDPEEENDIVESEEDPEQENDIVESEEEDLEKENDMVESAEEDPEEENDMVESAEE 254
S E E++ S + E+E ++VE E EK+ ES+ + + ES +
Sbjct: 166 -SSSESSSSESESESSSSESEEEEEVVEKTE---EKKEGSSESSSDSESSSDSSSESGDS 221
Query: 255 DPEEENDMVESAEEDPEEENDKSDGE 280
D +++ S+E++ + + + + E
Sbjct: 222 DSSSDSESESSSEDEKKRKAEPASEE 247
Score = 48.1 bits (113), Expect = 1e-04
Identities = 39/145 (26%), Positives = 66/145 (44%), Gaps = 13/145 (8%)
Query: 154 LISEAVKRDTDLTKSKDVHTTKKLKVIVESEENPEQENDIVESEEEDPEEENDIVESEED 213
+ EA K + DV + KK K + +PE V+ +++ ++E ESE +
Sbjct: 32 ITKEAAKEIAKQSSKTDV-SPKKSKKEAKRASSPEPSKKSVKKQKKSKKKEESSSESESE 90
Query: 214 P---EQENDIVESEEEDLEKENDMVESAEEDPEEENDMVESAEEDPEEENDMVESAEEDP 270
E E+ ESE E E+ ES+ + EEE V E+ +E + S+ E
Sbjct: 91 SSSSESESSSSESESSSSESESSSSESSSSESEEE---VIVKTEEKKESSSESSSSSESE 147
Query: 271 EEENDKSDGEGVLNLDEEQDIGYDT 295
EEE E V+ ++E+++ D+
Sbjct: 148 EEE------EAVVKIEEKKESSSDS 166
>CENB_CRIGR (P48988) Major centromere autoantigen B (Centromere
protein B) (CENP-B)
Length = 606
Score = 59.3 bits (142), Expect = 5e-08
Identities = 45/121 (37%), Positives = 62/121 (51%), Gaps = 8/121 (6%)
Query: 209 ESEEDPEQENDIVESEEEDLEKENDMVESAEEDPEEENDMVESA--EEDPEEENDMVESA 266
+SE + E+E + E EEE+ E E + E EE+ EEE E EE+ EEE D +
Sbjct: 402 KSEGEEEEEEEEEEEEEEEEEGEGEEEEEEEEEGEEEGGEGEEVGEEEEVEEEGDESDEE 461
Query: 267 EEDPEEENDKSDGEGVLNLDEEQDIGYDTVCAICDNGGEILPCEGRCLRSFHATLEDGRD 326
EE+ EEE ++S EG+ E +D V A GG + E +C + H LE G D
Sbjct: 462 EEEEEEEEEESSSEGL----EAEDWAQGVVEASGGFGGYSVQEEAQC-PTLH-FLEGGED 515
Query: 327 S 327
S
Sbjct: 516 S 516
Score = 58.2 bits (139), Expect = 1e-07
Identities = 38/100 (38%), Positives = 54/100 (54%), Gaps = 6/100 (6%)
Query: 195 ESEEEDPEEENDIVESEEDPEQENDIVESEEEDLEKENDMVESAEEDPEEENDMVESAEE 254
+SE E+ EEE + E EE+ E E + E EEE+ E+E E E+ E E + ES EE
Sbjct: 402 KSEGEEEEEEEEEEEEEEEEEGEGEEEEEEEEEGEEEGGEGEEVGEEEEVEEEGDESDEE 461
Query: 255 DPEEENDMVESAEEDPEEEN------DKSDGEGVLNLDEE 288
+ EEE + ES+ E E E+ + S G G ++ EE
Sbjct: 462 EEEEEEEEEESSSEGLEAEDWAQGVVEASGGFGGYSVQEE 501
Score = 55.8 bits (133), Expect = 6e-07
Identities = 42/133 (31%), Positives = 62/133 (46%), Gaps = 34/133 (25%)
Query: 182 ESEENPEQENDIVESEEEDPEEEN---DIVESEEDPEQENDIVESEEEDLEKENDMVESA 238
E EE E E + E EEE+ EEE + V EE+ E+E D ES+EE+ E+E + ES+
Sbjct: 416 EEEEEEEGEGEEEEEEEEEGEEEGGEGEEVGEEEEVEEEGD--ESDEEEEEEEEEEEESS 473
Query: 239 EEDPEEEN-----------------------------DMVESAEEDPEEENDMVESAEED 269
E E E+ + E ++ D +EE + E EED
Sbjct: 474 SEGLEAEDWAQGVVEASGGFGGYSVQEEAQCPTLHFLEGGEDSDSDSDEEEEDEEEDEED 533
Query: 270 PEEENDKSDGEGV 282
E+++D DG+ V
Sbjct: 534 EEDDDDDEDGDEV 546
Score = 37.7 bits (86), Expect = 0.17
Identities = 20/56 (35%), Positives = 31/56 (54%)
Query: 237 SAEEDPEEENDMVESAEEDPEEENDMVESAEEDPEEENDKSDGEGVLNLDEEQDIG 292
S + + EEE + E EE+ EEE + E EE+ E E + +GE V +E ++ G
Sbjct: 400 SFKSEGEEEEEEEEEEEEEEEEEGEGEEEEEEEEEGEEEGGEGEEVGEEEEVEEEG 455
>CEC1_CAEEL (P34618) Chromo domain protein cec-1
Length = 304
Score = 59.3 bits (142), Expect = 5e-08
Identities = 37/118 (31%), Positives = 66/118 (55%), Gaps = 8/118 (6%)
Query: 159 VKRDTDLTKSKDVHTTKKLKVIVESEENPEQENDIVESEEEDPEEENDIVESEEDPEQEN 218
++ D+D + + H++ K E EE E + + V ++++ +EE E EE E E+
Sbjct: 122 IRPDSD---TDEEHSSADKKSKAEDEEEVEDDEEPVPKKKKEVQEE---PEEEESVEGED 175
Query: 219 DIVESEEEDLEKENDMVESAEEDPEEENDMVESAEEDPEEENDMVESAEEDPEEENDK 276
+ E EDL+++ M E +E EEE+ +ES + + EEE + VE +E+ EEE ++
Sbjct: 176 EEESQEVEDLKEDEKMEE--DEKEEEEDVQLESEKNEKEEEEEKVEEKKEEEEEEEEE 231
Score = 56.6 bits (135), Expect = 4e-07
Identities = 44/151 (29%), Positives = 71/151 (46%), Gaps = 10/151 (6%)
Query: 140 DITPSENDVLCHMALISEAVKRDTDLTKSKDVHTTKKLKVIVESEENPEQENDIVESEEE 199
DI P + H + ++ D + + + KK K E +E PE+E + +EE
Sbjct: 121 DIRPDSDTDEEHSSADKKSKAEDEEEVEDDEEPVPKKKK---EVQEEPEEEESVEGEDEE 177
Query: 200 DPEEENDIVESE---EDPEQENDIV--ESEEEDLEKENDMVE--SAEEDPEEENDMVESA 252
+ +E D+ E E ED ++E + V ESE+ + E+E + VE EE+ EEE ++
Sbjct: 178 ESQEVEDLKEDEKMEEDEKEEEEDVQLESEKNEKEEEEEKVEEKKEEEEEEEEEEIQLVI 237
Query: 253 EEDPEEENDMVESAEEDPEEENDKSDGEGVL 283
E E +VE A PE S + V+
Sbjct: 238 VEKTVIETTIVEPAVATPEPSEPSSSEKAVV 268
Score = 51.6 bits (122), Expect = 1e-05
Identities = 31/112 (27%), Positives = 59/112 (52%), Gaps = 12/112 (10%)
Query: 187 PEQENDIVESEEEDPEEENDIVESEEDPEQENDIVESEEEDLEKENDMVESAEEDPEEEN 246
P+ + D EE ++ E EE+ E + + V +++++++E + ES E + EEE+
Sbjct: 124 PDSDTD----EEHSSADKKSKAEDEEEVEDDEEPVPKKKKEVQEEPEEEESVEGEDEEES 179
Query: 247 DMVESAEEDP--------EEENDMVESAEEDPEEENDKSDGEGVLNLDEEQD 290
VE +ED EEE+ +ES + + EEE +K + + +EE++
Sbjct: 180 QEVEDLKEDEKMEEDEKEEEEDVQLESEKNEKEEEEEKVEEKKEEEEEEEEE 231
Score = 39.3 bits (90), Expect = 0.058
Identities = 38/133 (28%), Positives = 67/133 (49%), Gaps = 12/133 (9%)
Query: 164 DLTKSKDVHTTKKLKVIVESEENPEQENDIVESEEEDPEEENDIVES-----EEDPEQEN 218
D +S++V K+ + + E +E E+E+ +ESE+ + EEE + VE EE+ E+E
Sbjct: 175 DEEESQEVEDLKEDEKM-EEDEKEEEEDVQLESEKNEKEEEEEKVEEKKEEEEEEEEEEI 233
Query: 219 DIVESEEEDLEKENDMVESAEEDPEEENDMVESAEEDPEEENDMVESAEEDPEEENDKSD 278
+V E+ + E +VE A PE S+ E EN +A + + + S
Sbjct: 234 QLVIVEKTVI--ETTIVEPAVATPEPSE---PSSSEKAVVENGSSSAAAGNSASKPEVSA 288
Query: 279 GEGVLNLDEEQDI 291
E V+ ++++ DI
Sbjct: 289 VE-VVTVEDDDDI 300
Score = 32.3 bits (72), Expect = 7.1
Identities = 22/93 (23%), Positives = 39/93 (41%)
Query: 198 EEDPEEENDIVESEEDPEQENDIVESEEEDLEKENDMVESAEEDPEEENDMVESAEEDPE 257
++ P + + + P+ + D S + K D E +++ E EE E
Sbjct: 108 KKSPPKRQRLAGGDIRPDSDTDEEHSSADKKSKAEDEEEVEDDEEPVPKKKKEVQEEPEE 167
Query: 258 EENDMVESAEEDPEEENDKSDGEGVLNLDEEQD 290
EE+ E EE E E+ K D + + EE++
Sbjct: 168 EESVEGEDEEESQEVEDLKEDEKMEEDEKEEEE 200
>S521_RAT (Q9QY02) Putative splicing factor YT521 (RA301-binding
protein)
Length = 738
Score = 58.5 bits (140), Expect = 9e-08
Identities = 50/173 (28%), Positives = 77/173 (43%), Gaps = 28/173 (16%)
Query: 156 SEAVKRDTDLTKSKDVHTTKKLKVIVESEENPEQENDIVESEEEDPEEENDIVESEEDPE 215
SE + + D S+ ++K+ E N E+ E+ E+ + E+EE+
Sbjct: 152 SERIGLEVDRRASRSSQSSKE-------EGNSEEYGSDHETGSSASSEQGNNTENEEEGG 204
Query: 216 QENDIVESEE--EDLEKENDMVESAEEDPEEENDMVESAEEDPEEENDMVESAEEDPEEE 273
+E D+ E EE ED + + ++ E AEE+ +EE D E EE+ EEE + E E D +EE
Sbjct: 205 EE-DVEEDEEVDEDGDDDEEVDEDAEEEEDEEEDEEEEDEEEEEEEEEEYEQDERDQKEE 263
Query: 274 NDKSDGEGVLNLDEEQDIGYDTVCAICDNGGEILPCEGRCLRSFHATLEDGRD 326
+ YDT D+G E + +RS T DG D
Sbjct: 264 GN----------------DYDTRSEASDSGSESVSFTDGSVRSGSGT--DGSD 298
Score = 46.6 bits (109), Expect = 4e-04
Identities = 32/108 (29%), Positives = 50/108 (45%), Gaps = 4/108 (3%)
Query: 182 ESEENPEQENDIVESEEEDPEEENDIVESEEDPEQENDIVESEEEDLEKENDMVESAEED 241
E+EE +E+ VE +EE E+ +D E +ED E+E D E E+E+ E E + E EE
Sbjct: 198 ENEEEGGEED--VEEDEEVDEDGDDDEEVDEDAEEEED--EEEDEEEEDEEEEEEEEEEY 253
Query: 242 PEEENDMVESAEEDPEEENDMVESAEEDPEEENDKSDGEGVLNLDEEQ 289
++E D E + +E + G G DE++
Sbjct: 254 EQDERDQKEEGNDYDTRSEASDSGSESVSFTDGSVRSGSGTDGSDEKK 301
>RESA_PLAFF (P13830) Ring-infected erythrocyte surface antigen
precursor
Length = 1073
Score = 58.2 bits (139), Expect = 1e-07
Identities = 43/117 (36%), Positives = 70/117 (59%), Gaps = 10/117 (8%)
Query: 184 EENPEQ-ENDIVESEEEDPEE--ENDIVESEEDPEQEN---DIVESEEEDLEKENDMVES 237
EEN E+ E ++ E+ EE+ EE E ++ E+ E+ +EN ++ E +EE++E+ + VE
Sbjct: 956 EENVEEVEENVEENVEENVEENVEENVEENVEENVEENVEENVEEYDEENVEEVEENVEE 1015
Query: 238 AEEDPEEEN--DMVESAEEDPEE--ENDMVESAEEDPEEENDKSDGEGVLNLDEEQD 290
E+ EEN + VE EE+ EE E ++ E+ EE+ EE ++ D E V +EE D
Sbjct: 1016 NVEENVEENVEENVEEVEENVEENVEENVEENVEENVEENVEEYDEENVEEHNEEYD 1072
Score = 57.8 bits (138), Expect = 2e-07
Identities = 46/138 (33%), Positives = 77/138 (55%), Gaps = 7/138 (5%)
Query: 157 EAVKRDTDLTKSKDVHTTKKLKVIVESEENPEQENDIVESEEEDPEEENDIVESEEDPEQ 216
E V+ D + ++V ++ V EEN E+ + VE E+ EEN EE+ E+
Sbjct: 926 ENVEHDAEENVEENVEEVEE-NVEENVEENVEENVEEVEENVEENVEENVEENVEENVEE 984
Query: 217 --ENDIVESEEEDLEK-ENDMVESAEEDPEE--ENDMVESAEEDPEE-ENDMVESAEEDP 270
E ++ E+ EE++E+ + + VE EE+ EE E ++ E+ EE+ EE E ++ E+ EE+
Sbjct: 985 NVEENVEENVEENVEEYDEENVEEVEENVEENVEENVEENVEENVEEVEENVEENVEENV 1044
Query: 271 EEENDKSDGEGVLNLDEE 288
EE +++ E V DEE
Sbjct: 1045 EENVEENVEENVEEYDEE 1062
Score = 57.0 bits (136), Expect = 3e-07
Identities = 47/159 (29%), Positives = 82/159 (51%), Gaps = 10/159 (6%)
Query: 134 KEFSSFDITPSENDVLCHMALISEAVKRDTDLTKSKDVHTTKKLKVIVESEENPEQENDI 193
K+ +FD ++ ++ I+ +K + H ++ V ++EEN E +D
Sbjct: 852 KKSKNFDTKDIVGYIMHGISTINTEMKNQNENVPEHVQHNAEE-NVEHDAEENVE--HDA 908
Query: 194 VESEEEDPEEENDIVESEEDPEQENDIVESEEEDLEKENDMVESAEEDPEEEN--DMVES 251
E+ E D EE VE + + E+D E+ EE++E+ + VE E+ EEN ++ E+
Sbjct: 909 EENVEHDAEEN---VEHDAEENVEHDAEENVEENVEEVEENVEENVEENVEENVEEVEEN 965
Query: 252 AEEDPEE--ENDMVESAEEDPEEENDKSDGEGVLNLDEE 288
EE+ EE E ++ E+ EE+ EE +++ E V DEE
Sbjct: 966 VEENVEENVEENVEENVEENVEENVEENVEENVEEYDEE 1004
Score = 53.5 bits (127), Expect = 3e-06
Identities = 45/151 (29%), Positives = 71/151 (46%), Gaps = 13/151 (8%)
Query: 157 EAVKRDTDLTKSKDVHTTKKLKVIVESEENPEQ-----ENDIVESEEEDPEEENDIVESE 211
E V+ D + D + EEN E+ E ++ E+ EE+ EE + VE
Sbjct: 910 ENVEHDAEENVEHDAEENVEHDAEENVEENVEEVEENVEENVEENVEENVEEVEENVEEN 969
Query: 212 EDPEQENDIVESEEEDLEK--ENDMVESAEEDPEEENDMVESAEEDPEEEN------DMV 263
+ E ++ E+ EE++E+ E ++ E+ EE EE + VE E+ EEN + V
Sbjct: 970 VEENVEENVEENVEENVEENVEENVEENVEEYDEENVEEVEENVEENVEENVEENVEENV 1029
Query: 264 ESAEEDPEEENDKSDGEGVLNLDEEQDIGYD 294
E EE+ EE +++ E V EE YD
Sbjct: 1030 EEVEENVEENVEENVEENVEENVEENVEEYD 1060
Score = 39.7 bits (91), Expect = 0.044
Identities = 31/107 (28%), Positives = 54/107 (49%), Gaps = 3/107 (2%)
Query: 155 ISEAVKRDTDLTKSKDVHTTKKLKVIVESEENPEQENDIVESEEEDPEEENDIVESEEDP 214
+ E V+ + + ++V + V EE E+ + VE E+ EEN EE+
Sbjct: 970 VEENVEENVEENVEENVEENVEENVEENVEEYDEENVEEVEENVEENVEENVEENVEENV 1029
Query: 215 EQENDIVESEEEDLEKENDMVESAEEDPEEENDMVESAEEDPEEEND 261
E+ + VE E+ +EN + E+ EE+ EE ++ E+ EE EE ++
Sbjct: 1030 EEVEENVEENVEENVEEN-VEENVEENVEEYDE--ENVEEHNEEYDE 1073
Score = 36.6 bits (83), Expect = 0.38
Identities = 34/121 (28%), Positives = 56/121 (46%), Gaps = 10/121 (8%)
Query: 156 SEAVKRDTDLTKSKDVHTTKKLKVIVESEENPEQENDIVESEEEDPEEENDIVESEEDPE 215
S+A+ D DL D+ K + ++ SEE +EN EEE ++ + E D E
Sbjct: 405 SDALYTDEDLLF--DLEKQKYMDMLDTSEEESVEEN-----EEEHTVDDEHVEEHTADDE 457
Query: 216 QENDIVESEEEDLEKENDMVESAEEDPEEENDMVES--AEEDPEE-ENDMVESAEEDPEE 272
+ +++E +E+ E EE E + E AEE EE +D+ +++E P
Sbjct: 458 HVEEPTVADDEHVEEPTVADEHVEEPTVAEEHVEEPTVAEEHVEEPASDVQQTSEAAPTI 517
Query: 273 E 273
E
Sbjct: 518 E 518
Score = 35.0 bits (79), Expect = 1.1
Identities = 26/114 (22%), Positives = 53/114 (45%), Gaps = 24/114 (21%)
Query: 187 PEQENDIVESEEEDPEEENDIVESEEDP-------------------EQENDIVESEEE- 226
P+QE + +E+ E DI+ S + +D + ++E+
Sbjct: 355 PQQEEPVQTVQEQQVNEYGDILPSLRASITNSAINYYDTVKDGVYLDHETSDALYTDEDL 414
Query: 227 --DLEKEN--DMVESAEEDPEEENDMVESAEEDPEEENDMVESAEEDPEEENDK 276
DLEK+ DM++++EE+ EEN+ + +++ EE+ + E+P +D+
Sbjct: 415 LFDLEKQKYMDMLDTSEEESVEENEEEHTVDDEHVEEHTADDEHVEEPTVADDE 468
>NMD2_YEAST (P38798) Nonsense-mediated mRNA decay protein 2
(Up-frameshift suppressor 2)
Length = 1089
Score = 58.2 bits (139), Expect = 1e-07
Identities = 52/186 (27%), Positives = 86/186 (45%), Gaps = 19/186 (10%)
Query: 120 KPEESRASILVKVLKE-FSSFDITPSENDVLCHMALISEAVKRDTDLTKSKDVHTTKKLK 178
K E R S K + F + SEN L A E++ + + KSKD
Sbjct: 769 KETEFRVSSTFKKYENIFGNTKFERSEN--LVESASRLESLLKSLNAIKSKDDRVKGSSA 826
Query: 179 VIVESEENPEQENDIVESEEEDPEEENDIVE---SEEDPEQENDIVES----------EE 225
I +E+ I E +E++ +E +D V+ +ED E ES E
Sbjct: 827 SIHNGKESAVPIESITEDDEDEDDENDDGVDLLGEDEDAEISTPNTESAPGKHQAKQDES 886
Query: 226 EDLEKENDMVESAEEDPEEENDMVESAEEDPEEENDMVESAEEDPEEENDKSDGEGVLNL 285
ED + E+D + ++D ++++D E E+D E+++D ++D EEE+ SD E +L
Sbjct: 887 EDEDDEDDDEDDDDDDDDDDDDGEEGDEDDDEDDDD---EDDDDEEEEDSDSDLEYGGDL 943
Query: 286 DEEQDI 291
D ++DI
Sbjct: 944 DADRDI 949
Score = 45.8 bits (107), Expect = 6e-04
Identities = 23/94 (24%), Positives = 53/94 (55%), Gaps = 1/94 (1%)
Query: 195 ESEEEDPEEENDIVESEEDPEQENDIVESEEEDLEKENDMVESAEEDPEEENDMVESAEE 254
ESE+ED +E++D + ++D + ++D E +E+D E ++D + EE+ + ++D+ +
Sbjct: 885 ESEDED-DEDDDEDDDDDDDDDDDDGEEGDEDDDEDDDDEDDDDEEEEDSDSDLEYGGDL 943
Query: 255 DPEEENDMVESAEEDPEEENDKSDGEGVLNLDEE 288
D + + +M EE + D+ + + L+ +
Sbjct: 944 DADRDIEMKRMYEEYERKLKDEEERKAEEELERQ 977
Score = 45.4 bits (106), Expect = 8e-04
Identities = 24/102 (23%), Positives = 55/102 (53%), Gaps = 1/102 (0%)
Query: 182 ESEENPEQENDIVESEEEDPEEENDIVESEEDPEQENDIVESEEEDLEKENDMVESAEED 241
ESE+ ++++D + +++D ++++ E+D E ++D + +EE+ + ++D+ + D
Sbjct: 885 ESEDEDDEDDDEDDDDDDDDDDDDGEEGDEDDDEDDDDEDDDDEEEEDSDSDLEYGGDLD 944
Query: 242 PEEENDMVESAEEDPEEENDMVE-SAEEDPEEENDKSDGEGV 282
+ + +M EE + D E AEE+ E + K E +
Sbjct: 945 ADRDIEMKRMYEEYERKLKDEEERKAEEELERQFQKMMQESI 986
Score = 34.3 bits (77), Expect = 1.9
Identities = 22/102 (21%), Positives = 52/102 (50%), Gaps = 9/102 (8%)
Query: 182 ESEENPEQENDIVESEEEDPEEENDIVESEEDPEQENDIVESEEEDLEKENDMVESAEED 241
+ +++ +E D E ++ED ++E+D + EE+ + ++D+ + D +++ +M EE
Sbjct: 903 DDDDDDGEEGD--EDDDEDDDDEDD--DDEEEEDSDSDLEYGGDLDADRDIEMKRMYEEY 958
Query: 242 PEEENDMVESAEEDPEEENDMVESAEEDPEEENDKSDGEGVL 283
+ D EE+ + E ++ ++ +E D E V+
Sbjct: 959 ERKLKD-----EEERKAEEELERQFQKMMQESIDARKSEKVV 995
>IF38_SCHPO (O14164) Probable eukaryotic translation initiation
factor 3 93 kDa subunit (eIF3 p93)
Length = 918
Score = 58.2 bits (139), Expect = 1e-07
Identities = 32/99 (32%), Positives = 51/99 (51%), Gaps = 3/99 (3%)
Query: 183 SEENPEQENDIVESEEEDPEEENDIVESEEDPEQENDIVESEEEDLEKENDMVESAEEDP 242
SEE +E SE E EEE++ ESE + ++ + SE+ + + E+ EE+
Sbjct: 38 SEEESSEEESASSSESESSEEESESEESEVEVPKKKAVAASEDSESDSES---SEEEEET 94
Query: 243 EEENDMVESAEEDPEEENDMVESAEEDPEEENDKSDGEG 281
E E D S E + E E++ E + EEE+D+S+ G
Sbjct: 95 ESEEDSEVSDESESESESESESEEESESEEESDESERSG 133
Score = 52.4 bits (124), Expect = 7e-06
Identities = 40/131 (30%), Positives = 65/131 (49%), Gaps = 10/131 (7%)
Query: 154 LISEAVKRDTDLTKSKDVHTTKKLKVIVESEENPEQENDIVESEEEDPEEENDIVESEED 213
L S +K+ D S + ++++ E+ E+E++ ESE E P+++ V + ED
Sbjct: 25 LTSSRLKKQDD--SSSEEESSEEESASSSESESSEEESESEESEVEVPKKK--AVAASED 80
Query: 214 PEQENDIVESEEEDLEKENDMVESAEEDPEEENDMVESAEEDPEEENDMVE-----SAEE 268
E +++ E EEE E E D S E + E E++ E + EEE+D E S +
Sbjct: 81 SESDSESSEEEEET-ESEEDSEVSDESESESESESESEEESESEEESDESERSGPSSFLK 139
Query: 269 DPEEENDKSDG 279
PE+E K G
Sbjct: 140 KPEKEEAKPAG 150
Score = 52.0 bits (123), Expect = 9e-06
Identities = 31/108 (28%), Positives = 50/108 (45%)
Query: 183 SEENPEQENDIVESEEEDPEEENDIVESEEDPEQENDIVESEEEDLEKENDMVESAEEDP 242
SEEN + + + ++ EEE+ ES E E+ ESE E+ E E ++
Sbjct: 20 SEENRLTSSRLKKQDDSSSEEESSEEESASSSESESSEEESESEESEVEVPKKKAVAASE 79
Query: 243 EEENDMVESAEEDPEEENDMVESAEEDPEEENDKSDGEGVLNLDEEQD 290
+ E+D S EE+ E + E ++E E +S+ E +EE D
Sbjct: 80 DSESDSESSEEEEETESEEDSEVSDESESESESESESEEESESEEESD 127
Score = 47.4 bits (111), Expect = 2e-04
Identities = 42/133 (31%), Positives = 69/133 (51%), Gaps = 18/133 (13%)
Query: 156 SEAVKRDTDLTKSKDVHTTKKLKVIVESEENPEQENDIVESEEEDPEEENDIVESEEDPE 215
SE+ + +++ +S +V KK K + SE++ E +++ E EEE EE+ V E + E
Sbjct: 53 SESSEEESESEES-EVEVPKK-KAVAASEDS-ESDSESSEEEEETESEEDSEVSDESESE 109
Query: 216 QENDIVESEEEDLEKENDMVE-----SAEEDPEEENDMV--------ESAEE--DPEEEN 260
E++ EE + E+E+D E S + PE+E ES+EE D EE
Sbjct: 110 SESESESEEESESEEESDESERSGPSSFLKKPEKEEAKPAGLKFLRGESSEESSDEEEGR 169
Query: 261 DMVESAEEDPEEE 273
+V+SA++ EE
Sbjct: 170 RVVKSAKDKRYEE 182
Score = 45.1 bits (105), Expect = 0.001
Identities = 29/107 (27%), Positives = 49/107 (45%), Gaps = 11/107 (10%)
Query: 195 ESEEEDPEEENDIVESEEDPEQENDIVESEEEDLEKENDMVESAEEDPEEENDMVE---- 250
++E D EEN + S + ++ E E+ + ES+EE+ E E VE
Sbjct: 13 DAESVDSSEENRLTSSRLKKQDDSSSEEESSEEESASSSESESSEEESESEESEVEVPKK 72
Query: 251 ---SAEEDPEEENDMVESAEEDPEEE----NDKSDGEGVLNLDEEQD 290
+A ED E +++ E EE EE +D+S+ E + E++
Sbjct: 73 KAVAASEDSESDSESSEEEEETESEEDSEVSDESESESESESESEEE 119
Score = 37.7 bits (86), Expect = 0.17
Identities = 26/90 (28%), Positives = 43/90 (46%), Gaps = 16/90 (17%)
Query: 213 DPEQENDIVESEEEDLEKENDMVESAEEDPEEENDMVESAEEDPEEENDMVES------- 265
D +EN + S L+K++D S+EE+ EE S E EEE++ ES
Sbjct: 18 DSSEENRLTSSR---LKKQDD--SSSEEESSEEESASSSESESSEEESESEESEVEVPKK 72
Query: 266 ----AEEDPEEENDKSDGEGVLNLDEEQDI 291
A ED E +++ S+ E +E+ ++
Sbjct: 73 KAVAASEDSESDSESSEEEEETESEEDSEV 102
>CNG4_BOVIN (Q28181) 240 kDa protein of rod photoreceptor
CNG-channel [Contains: Glutamic acid-rich protein
(GARP); Cyclic-nucleotide-gated cation channel 4 (CNG
channel 4) (CNG-4) (Cyclic nucleotide-gated cation
channel modulatory subunit)]
Length = 1394
Score = 58.2 bits (139), Expect = 1e-07
Identities = 42/135 (31%), Positives = 68/135 (50%), Gaps = 5/135 (3%)
Query: 156 SEAVKRDTDLTKSKDVHTTKKLKVIVESEENPEQENDIVESEEEDPEEENDIVESEEDPE 215
SEA D + K + T ++L I E +E+ E+E + E EEE+ E+ + E EE E
Sbjct: 330 SEAAPADEEKGKVVE-QTPRELPRIQEEKEDEEEEKEDGEEEEEEGREKEE-EEGEEKEE 387
Query: 216 QENDIVESEEEDLEKENDMVESAEEDPEEENDMVESAEEDPEEENDMVESAEEDPEEEND 275
+E E EE + ++E + EE E+E++ EE+ + E E++ EE
Sbjct: 388 EEGREKEEEEGEKKEEEGREKEEEEGGEKEDEEGREKEEEEGRGKEEEEGGEKEEEEGRG 447
Query: 276 KSDGEGVLNLDEEQD 290
K + EG +EE+D
Sbjct: 448 KEEVEG---REEEED 459
Score = 52.8 bits (125), Expect = 5e-06
Identities = 49/158 (31%), Positives = 68/158 (43%), Gaps = 14/158 (8%)
Query: 156 SEAVKRDTDLTKSKDVHTTKKLKVIVESEENPEQENDIVESEEEDPEEENDIVESEEDPE 215
S + + D +D H + E + + + E+ P E I E +ED E
Sbjct: 302 SHLILEEVDPHWEEDEHQEGSTSTSPRTSEAAPADEEKGKVVEQTPRELPRIQEEKEDEE 361
Query: 216 QEN-DIVESEEEDLEKENDMVESAEEDPEEENDMVESAEEDPEEENDMVESAEEDPEEEN 274
+E D E EEE EKE E EE EEE E E + +EE E E++ EE
Sbjct: 362 EEKEDGEEEEEEGREKEE---EEGEEKEEEEGREKEEEEGEKKEE----EGREKEEEEGG 414
Query: 275 DKSDGEGVLNLDEEQDIGYDTVCAICDNGGEILPCEGR 312
+K D EG +EE+ G + + GGE EGR
Sbjct: 415 EKEDEEG-REKEEEEGRGKEE-----EEGGEKEEEEGR 446
Score = 52.4 bits (124), Expect = 7e-06
Identities = 40/124 (32%), Positives = 57/124 (45%), Gaps = 13/124 (10%)
Query: 182 ESEENPEQENDIVESEE-EDPEEENDIVESEEDPEQENDIVESEEEDLEKENDMVESAEE 240
E EE E+E E EE E EEE E EE E+E++ +EE+ + + E E+
Sbjct: 381 EGEEKEEEEGREKEEEEGEKKEEEGREKEEEEGGEKEDEEGREKEEEEGRGKEEEEGGEK 440
Query: 241 DPEEENDMVE----SAEEDPEEEND--------MVESAEEDPEEENDKSDGEGVLNLDEE 288
+ EE E EED EEE D +V +EED EE++ D V +
Sbjct: 441 EEEEGRGKEEVEGREEEEDEEEEQDHSVLLDSYLVPQSEEDRSEESETQDQSEVGGAQAQ 500
Query: 289 QDIG 292
++G
Sbjct: 501 GEVG 504
Score = 45.1 bits (105), Expect = 0.001
Identities = 37/121 (30%), Positives = 55/121 (44%), Gaps = 14/121 (11%)
Query: 182 ESEENPEQENDIVESEEEDPEEENDIV--ESEEDP----EQENDIVESEEEDLEKENDMV 235
E EE ++E + E EEE+ E+ D E EE+ E+E + EEE KE
Sbjct: 394 EEEEGEKKEEEGREKEEEEGGEKEDEEGREKEEEEGRGKEEEEGGEKEEEEGRGKEEVEG 453
Query: 236 ESAEEDPEEEND--------MVESAEEDPEEENDMVESAEEDPEEENDKSDGEGVLNLDE 287
EED EEE D +V +EED EE++ + +E + + G L+ +
Sbjct: 454 REEEEDEEEEQDHSVLLDSYLVPQSEEDRSEESETQDQSEVGGAQAQGEVGGAQALSEES 513
Query: 288 E 288
E
Sbjct: 514 E 514
Score = 42.7 bits (99), Expect = 0.005
Identities = 35/124 (28%), Positives = 56/124 (44%), Gaps = 14/124 (11%)
Query: 182 ESEENPEQENDIVESEEEDP-----EEENDIVESEEDPEQENDIVESEEEDLEKEND--- 233
E EE E+E++ +EE+ EEE E EE +E EEED E+E D
Sbjct: 409 EEEEGGEKEDEEGREKEEEEGRGKEEEEGGEKEEEEGRGKEEVEGREEEEDEEEEQDHSV 468
Query: 234 -----MVESAEEDPEEENDMVESAEEDPEEENDMVESAEEDPEEENDKSDGEGVLNLDEE 288
+V +EED EE++ + +E + V A+ EE++ D V ++
Sbjct: 469 LLDSYLVPQSEEDRSEESETQDQSEVGGAQAQGEVGGAQA-LSEESETQDQSEVGGAQDQ 527
Query: 289 QDIG 292
++G
Sbjct: 528 SEVG 531
Score = 39.7 bits (91), Expect = 0.044
Identities = 33/103 (32%), Positives = 47/103 (45%), Gaps = 5/103 (4%)
Query: 188 EQENDIVESEEEDPEEENDIVESEEDPEQENDIVESEEEDLEKENDMVESAEEDP--EEE 245
EQE + EE DP E D E E+ D EK + ++ E P +EE
Sbjct: 298 EQEESHLILEEVDPHWEED-EHQEGSTSTSPRTSEAAPADEEKGKVVEQTPRELPRIQEE 356
Query: 246 NDMVESAEEDPEEENDMVESAEEDPEEENDKSDGEGVLNLDEE 288
+ E +ED EEE + E E++ EE +K + EG +EE
Sbjct: 357 KEDEEEEKEDGEEEEE--EGREKEEEEGEEKEEEEGREKEEEE 397
Score = 35.8 bits (81), Expect = 0.64
Identities = 26/94 (27%), Positives = 44/94 (46%), Gaps = 5/94 (5%)
Query: 202 EEENDIVESEEDPEQENDIVESEEEDLEKENDMVESAEEDPEEENDMVESAEEDP---EE 258
+EE+ ++ E DP E D E +E E+A D E+ + ++ E P EE
Sbjct: 299 QEESHLILEEVDPHWEED--EHQEGSTSTSPRTSEAAPADEEKGKVVEQTPRELPRIQEE 356
Query: 259 ENDMVESAEEDPEEENDKSDGEGVLNLDEEQDIG 292
+ D E E+ EEE + + E ++E++ G
Sbjct: 357 KEDEEEEKEDGEEEEEEGREKEEEEGEEKEEEEG 390
Score = 33.5 bits (75), Expect = 3.2
Identities = 25/73 (34%), Positives = 35/73 (47%), Gaps = 15/73 (20%)
Query: 183 SEENPEQENDIVESEEE----------DPEEENDIVESEEDPEQENDIVESEEEDLEKEN 232
S+E PE + D EE DP E+ +VE PE++ + + EEE EKE
Sbjct: 1327 SQERPEGDKDAARPEEHPVRIHVTLGPDPSEQILLVEV---PEKQEEKEKKEEETEEKEE 1383
Query: 233 DMVESAEEDPEEE 245
E A ++ EEE
Sbjct: 1384 G--EEARKEKEEE 1394
Score = 33.5 bits (75), Expect = 3.2
Identities = 33/141 (23%), Positives = 57/141 (40%), Gaps = 31/141 (21%)
Query: 182 ESEENPEQENDIVESEEEDPEEEND---------IVESEEDPEQENDIVESEE------- 225
E EE +E EEED EEE D + +SEED +E++ + E
Sbjct: 441 EEEEGRGKEEVEGREEEEDEEEEQDHSVLLDSYLVPQSEEDRSEESETQDQSEVGGAQAQ 500
Query: 226 ------EDLEKENDMVESAEEDPEEENDMVESAEEDPE----EENDMVESAEEDPE---- 271
+ L +E++ + +E ++ V A+ E +E D V A++
Sbjct: 501 GEVGGAQALSEESETQDQSEVGGAQDQSEVGGAQAQGEVGGAQEQDGVGGAQDQSTSHQE 560
Query: 272 -EENDKSDGEGVLNLDEEQDI 291
+E +D GV +E ++
Sbjct: 561 LQEEALADSSGVPATEEHPEL 581
>ASF1_YEAST (P32447) Anti-silencing protein 1
Length = 279
Score = 58.2 bits (139), Expect = 1e-07
Identities = 36/99 (36%), Positives = 60/99 (60%), Gaps = 5/99 (5%)
Query: 182 ESEENPEQENDIVESEEEDPEEENDIV--ESEEDPEQENDIVESEE--EDLEKENDMVES 237
E + P ++ + + EEED EEE+D E +ED +QE+ E+EE E+ E+E + E
Sbjct: 158 EGDLYPPEQPGVDDEEEEDDEEEDDDEDDEDDEDDDQEDGEGEAEEAAEEEEEEEEKTED 217
Query: 238 AEEDPEEENDMVESAEEDPEEENDMVESAEEDPEEENDK 276
E + EEE + +E+++ D EE + V S +++ E+ NDK
Sbjct: 218 NETNLEEEEEDIENSDGDEEEGEEEVGSVDKN-EDGNDK 255
Score = 55.5 bits (132), Expect = 8e-07
Identities = 37/106 (34%), Positives = 58/106 (53%), Gaps = 13/106 (12%)
Query: 188 EQENDIVESEE---EDPEEENDIVESEEDPEQENDIVESEEEDLEKENDMVESAEEDPEE 244
E E D+ E+ +D EEE+D E E+D E + D + ++ED E E E A E+ EE
Sbjct: 156 ENEGDLYPPEQPGVDDEEEEDD--EEEDDDEDDEDDEDDDQEDGEGE---AEEAAEEEEE 210
Query: 245 ENDMVESAEEDPEEENDMVESAEEDPEEENDKSDGEGVLNLDEEQD 290
E + E E + EEE + +E+++ D EE E V ++D+ +D
Sbjct: 211 EEEKTEDNETNLEEEEEDIENSDGDEEEGE-----EEVGSVDKNED 251
Score = 53.1 bits (126), Expect = 4e-06
Identities = 29/95 (30%), Positives = 57/95 (59%), Gaps = 2/95 (2%)
Query: 185 ENPEQENDIVESEEEDPEEENDIVESEEDPEQENDIVESEEEDLEKENDMVESAEEDPEE 244
++ E+E+D E E++D ++E+D + +ED E E + EEE+ E++ + E+ E+ EE
Sbjct: 170 DDEEEEDD--EEEDDDEDDEDDEDDDQEDGEGEAEEAAEEEEEEEEKTEDNETNLEEEEE 227
Query: 245 ENDMVESAEEDPEEENDMVESAEEDPEEENDKSDG 279
+ + + EE+ EEE V+ E+ +++ K +G
Sbjct: 228 DIENSDGDEEEGEEEVGSVDKNEDGNDKKRRKIEG 262
Score = 49.3 bits (116), Expect = 6e-05
Identities = 25/93 (26%), Positives = 51/93 (53%), Gaps = 3/93 (3%)
Query: 182 ESEENPEQENDIVESEEEDPEEENDIVESEEDPEQENDIVESEEEDLEKENDMVESA--- 238
+ EE + E+D + +++ + E + E+ E+ E+E + E E +LE+E + +E++
Sbjct: 176 DDEEEDDDEDDEDDEDDDQEDGEGEAEEAAEEEEEEEEKTEDNETNLEEEEEDIENSDGD 235
Query: 239 EEDPEEENDMVESAEEDPEEENDMVESAEEDPE 271
EE+ EEE V+ E+ +++ +E D E
Sbjct: 236 EEEGEEEVGSVDKNEDGNDKKRRKIEGGSTDIE 268
Score = 48.5 bits (114), Expect = 1e-04
Identities = 27/78 (34%), Positives = 44/78 (55%), Gaps = 4/78 (5%)
Query: 213 DPEQENDIVESEEEDLEKENDMVESAEEDPEEENDMVESAEEDPEEENDMVESAEEDPEE 272
D E E D+ E+ ++ E + + E+D E++ D + +ED E E + E+AEE+ EE
Sbjct: 154 DNENEGDLYPPEQPGVDDEEEEDDEEEDDDEDDEDDEDDDQEDGEGEAE--EAAEEEEEE 211
Query: 273 ENDKSDGEGVLNLDEEQD 290
E D E NL+EE++
Sbjct: 212 EEKTEDNE--TNLEEEEE 227
Score = 47.4 bits (111), Expect = 2e-04
Identities = 33/107 (30%), Positives = 52/107 (47%), Gaps = 15/107 (14%)
Query: 200 DPEEENDIVESEE----DPEQENDIVESEEEDLEKENDMVESAEEDPEEENDMVESAEED 255
D E E D+ E+ D E+E+D E ++ED E + D +D E+ E A E+
Sbjct: 154 DNENEGDLYPPEQPGVDDEEEEDDEEEDDDEDDEDDED------DDQEDGEGEAEEAAEE 207
Query: 256 PEEENDMVESAEEDPEEENDKSDGEGVLNLDEEQDIGYDTVCAICDN 302
EEE + E E + EEE E + N D +++ G + V ++ N
Sbjct: 208 EEEEEEKTEDNETNLEEEE-----EDIENSDGDEEEGEEEVGSVDKN 249
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.321 0.138 0.426
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 137,647,703
Number of Sequences: 164201
Number of extensions: 6386693
Number of successful extensions: 73396
Number of sequences better than 10.0: 1681
Number of HSP's better than 10.0 without gapping: 716
Number of HSP's successfully gapped in prelim test: 1032
Number of HSP's that attempted gapping in prelim test: 32202
Number of HSP's gapped (non-prelim): 13459
length of query: 1084
length of database: 59,974,054
effective HSP length: 121
effective length of query: 963
effective length of database: 40,105,733
effective search space: 38621820879
effective search space used: 38621820879
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 71 (32.0 bits)
Medicago: description of AC124966.7