BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC124963.7 + phase: 0
(512 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
PRXC_STRAU (O31168) Non-heme chloroperoxidase (EC 1.11.1.10) (Ch... 35 0.60
BPA2_STRAU (P29715) Non-haem bromoperoxidase BPO-A2 (EC 1.11.1.-... 35 0.60
FD6C_SPIOL (P48629) Omega-6 fatty acid desaturase, chloroplast p... 33 1.3
ELH1_ACIAD (Q59093) 3-oxoadipate enol-lactonase I (EC 3.1.1.24) ... 33 1.3
YA60_SYNY3 (P72637) Hypothetical UPF0182 protein sll1060 32 3.0
PRXC_SYNY3 (Q55921) Putative non-heme chloroperoxidase (EC 1.11.... 32 3.0
LUXS_STRR6 (P65335) S-ribosylhomocysteinase (EC 3.13.1.-) (Autoi... 32 3.0
LUXS_STRPN (P65334) S-ribosylhomocysteinase (EC 3.13.1.-) (Autoi... 32 3.0
NFIB_CHICK (P17924) Nuclear factor 1 B-type (Nuclear factor 1/B)... 31 8.7
GCSA_THEVO (Q97C05) Probable glycine dehydrogenase [decarboxylat... 31 8.7
>PRXC_STRAU (O31168) Non-heme chloroperoxidase (EC 1.11.1.10)
(Chloride peroxidase) (CPO-T) (Chloroperoxidase T)
Length = 278
Score = 34.7 bits (78), Expect = 0.60
Identities = 25/85 (29%), Positives = 46/85 (53%), Gaps = 3/85 (3%)
Query: 199 KASLLEDYGVRLVTYDLPGFGE-SDPHPSRNFNSSAMDMLHLVDAVNVTDKFWV-LCHSS 256
+++ L D G R++TYD GFG+ S P ++++ A D+ +++ +++ D V +
Sbjct: 43 QSAALLDAGYRVITYDRRGFGQSSQPTTGYDYDTFAADLNTVLETLDLQDAVLVGFSMGT 102
Query: 257 GCIHAWASLKYIPERIAGAAMLAPM 281
G + + S Y RIA A LA +
Sbjct: 103 GEVARYVS-SYGTARIAKVAFLASL 126
>BPA2_STRAU (P29715) Non-haem bromoperoxidase BPO-A2 (EC 1.11.1.-)
(Bromide peroxidase) (BPO2)
Length = 277
Score = 34.7 bits (78), Expect = 0.60
Identities = 25/85 (29%), Positives = 46/85 (53%), Gaps = 3/85 (3%)
Query: 199 KASLLEDYGVRLVTYDLPGFGE-SDPHPSRNFNSSAMDMLHLVDAVNVTDKFWV-LCHSS 256
+++ L D G R++TYD GFG+ S P ++++ A D+ +++ +++ D V +
Sbjct: 42 QSAALLDAGYRVITYDRRGFGQSSQPTTGYDYDTFAADLNTVLETLDLQDAVLVGFSMGT 101
Query: 257 GCIHAWASLKYIPERIAGAAMLAPM 281
G + + S Y RIA A LA +
Sbjct: 102 GEVARYVS-SYGTARIAKVAFLASL 125
>FD6C_SPIOL (P48629) Omega-6 fatty acid desaturase, chloroplast
precursor (EC 1.14.19.-)
Length = 447
Score = 33.5 bits (75), Expect = 1.3
Identities = 22/65 (33%), Positives = 27/65 (40%), Gaps = 9/65 (13%)
Query: 249 FWVLCHSSGCIHAWASLKYIPERIAGAAMLAPMVSPYE-------SHMTKDEMKRTWEKW 301
F+V+ H C H S + E I G P++ PYE H TK M R W
Sbjct: 166 FFVIGHD--CAHKSFSKNKLVEDIVGTLAFMPLIYPYEPWRFKHDQHHTKTNMLREDTAW 223
Query: 302 LPRRK 306
LP K
Sbjct: 224 LPIMK 228
>ELH1_ACIAD (Q59093) 3-oxoadipate enol-lactonase I (EC 3.1.1.24)
(Enol-lactone hydrolase I) (Beta-ketoadipate
enol-lactone hydrolase I)
Length = 266
Score = 33.5 bits (75), Expect = 1.3
Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Query: 200 ASLLEDYGVRLVTYDLPGFGESDPHPSRNFNSSAMDMLHLVDAVNVTDKFWVLCHSSGCI 259
A+L Y R+VTYD G G+SD + + D+L ++DA+N+ + G
Sbjct: 48 AALKSQY--RVVTYDTRGHGQSDVIENTTLQNLGEDVLDILDALNIEKAHFCGISMGGLT 105
Query: 260 HAWASL 265
W +
Sbjct: 106 ALWLGI 111
>YA60_SYNY3 (P72637) Hypothetical UPF0182 protein sll1060
Length = 1032
Score = 32.3 bits (72), Expect = 3.0
Identities = 21/58 (36%), Positives = 29/58 (49%), Gaps = 3/58 (5%)
Query: 213 YDLPGFGESDPHPSRNFNSSAMDMLHLVDAVNVTDKFWVLCHSSGCIHAWASLKYIPE 270
Y PG G+++ P RNFN + LVDA N +F+ + I+AW K PE
Sbjct: 743 YSDPGEGDAN-QPGRNFNYIRNSVKILVDAYNGDVRFFTIDKQDPLINAWQ--KIFPE 797
>PRXC_SYNY3 (Q55921) Putative non-heme chloroperoxidase (EC
1.11.1.10) (Chloride peroxidase)
Length = 276
Score = 32.3 bits (72), Expect = 3.0
Identities = 23/82 (28%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Query: 202 LLEDYGVRLVTYDLPGFG-ESDPHPSRNFNSSAMDMLHLVDAVNVTDKFWV-LCHSSGCI 259
+L + G R++TYD GFG S P ++++ A D+ L+ +++ + V +G +
Sbjct: 46 VLLNAGYRVITYDRRGFGASSQPSSGYDYDTFAADLHTLMTKLDLQNTVLVGFSMGTGEV 105
Query: 260 HAWASLKYIPERIAGAAMLAPM 281
+ KY ER+ A ++AP+
Sbjct: 106 TRYLG-KYGSERVQKAVLMAPV 126
>LUXS_STRR6 (P65335) S-ribosylhomocysteinase (EC 3.13.1.-)
(Autoinducer-2 production protein luxS) (AI-2 synthesis
protein)
Length = 160
Score = 32.3 bits (72), Expect = 3.0
Identities = 16/58 (27%), Positives = 37/58 (63%), Gaps = 4/58 (6%)
Query: 11 SEELASLMENSLPESSTTTSFEDVRKSSSSEEVEVGESLKEHAVGFLMAWCEILMELG 68
S ++A+++++SL E + TT++EDV ++ +E + K+H++ W ++++E G
Sbjct: 96 SAKIAAVIKDSLKEIAETTTWEDVPGTT----IESCGNYKDHSLFSAKEWAKLILEQG 149
>LUXS_STRPN (P65334) S-ribosylhomocysteinase (EC 3.13.1.-)
(Autoinducer-2 production protein luxS) (AI-2 synthesis
protein)
Length = 160
Score = 32.3 bits (72), Expect = 3.0
Identities = 16/58 (27%), Positives = 37/58 (63%), Gaps = 4/58 (6%)
Query: 11 SEELASLMENSLPESSTTTSFEDVRKSSSSEEVEVGESLKEHAVGFLMAWCEILMELG 68
S ++A+++++SL E + TT++EDV ++ +E + K+H++ W ++++E G
Sbjct: 96 SAKIAAVIKDSLKEIAETTTWEDVPGTT----IESCGNYKDHSLFSAKEWAKLILEQG 149
>NFIB_CHICK (P17924) Nuclear factor 1 B-type (Nuclear factor 1/B)
(NF1-B) (NFI-B) (NF-I/B) (CCAAT-box binding
transcription factor) (CTF) (TGGCA-binding protein)
Length = 560
Score = 30.8 bits (68), Expect = 8.7
Identities = 28/98 (28%), Positives = 51/98 (51%), Gaps = 9/98 (9%)
Query: 289 MTKDEMKRTWEKWLPRRKYMYSLAYRFPKLLSFFYRKSFLPEKHE-RIDKQFSLSLGKKD 347
+T+DE E LP ++ ++AY + L + RK +KHE R+ K ++ KD
Sbjct: 8 LTQDEFHPFIEALLP---HVRAIAYTWFNLQA---RKRKYFKKHEKRMSKDEERAV--KD 59
Query: 348 EILVDEPAFEEYWQRDLEESVRQGNLKPFIEEALLQVS 385
E+L ++P ++ W L +R+ + F E+ +L V+
Sbjct: 60 ELLSEKPEIKQKWASRLLAKLRKDIRQEFREDFVLTVT 97
>GCSA_THEVO (Q97C05) Probable glycine dehydrogenase
[decarboxylating] subunit 1 (EC 1.4.4.2) (Glycine
decarboxylase subunit 1) (Glycine cleavage system
P-protein subunit 1)
Length = 434
Score = 30.8 bits (68), Expect = 8.7
Identities = 38/164 (23%), Positives = 68/164 (41%), Gaps = 23/164 (14%)
Query: 12 EELASLMENSLPESSTTTSFEDVRKSSSSEEVEVGESLKEHAV------GFLMAWCEILM 65
+E++S+++ L ST F D+ S +E+ +G L EH V + E+L
Sbjct: 2 DEISSMLDY-LGIKSTEELFSDIPLSVRKKEIGIGSPLDEHLVLERARKYASLNSTEMLN 60
Query: 66 ELGRGCRDILQQNFFNEDSYLVQKLRGPCSKLSKRLSFLNDFLPEDRDPLLA-----WSI 120
LG G D + N Y++ K S+ L + PE +L S+
Sbjct: 61 FLGNGIYDRVIPEAVN---YIISK--------SEFLDSYTPYQPEVSQGMLQSIFEYQSL 109
Query: 121 VFTVFLLAFAAISVDSNHQTSTKAAMVRMHPPIASRILLPDGRY 164
+ +F + F S+ + +AA + ++IL+P+ Y
Sbjct: 110 ISDLFKMDFTNASMYDGYSALGEAARMAYRINGKNKILIPESTY 153
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.320 0.136 0.418
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 62,002,388
Number of Sequences: 164201
Number of extensions: 2666426
Number of successful extensions: 6420
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 6418
Number of HSP's gapped (non-prelim): 10
length of query: 512
length of database: 59,974,054
effective HSP length: 115
effective length of query: 397
effective length of database: 41,090,939
effective search space: 16313102783
effective search space used: 16313102783
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 68 (30.8 bits)
Medicago: description of AC124963.7