BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC124963.11 - phase: 0 /pseudo
         (168 letters)

Database: sprot 
           164,201 sequences; 59,974,054 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

GALY_YEAST (P19659) Transcription regulatory protein GAL11             29  5.8
CIBA_PAEPP (P57091) Parasporal crystal protein cry18Ba (Paraspor...    28  9.9

>GALY_YEAST (P19659) Transcription regulatory protein GAL11
          Length = 1081

 Score = 28.9 bits (63), Expect = 5.8
 Identities = 12/24 (50%), Positives = 17/24 (70%)

Query: 1   MVTKVGQLQHLESIAKKQQQQQQQ 24
           M   + Q+QHL+ +  +QQQQQQQ
Sbjct: 658 MQQSLQQMQHLQQLKMQQQQQQQQ 681


>CIBA_PAEPP (P57091) Parasporal crystal protein cry18Ba (Parasporal
           delta-endotoxin CryXVIIIB(a)) (Crystaline parasporal
           protoxin) (76 kDa crystal protein)
          Length = 675

 Score = 28.1 bits (61), Expect = 9.9
 Identities = 12/30 (40%), Positives = 20/30 (66%)

Query: 122 TLNIIDLVGLFTLLAFLMFMIFNSSNSLEI 151
           TLN++DLV +++LL ++   I  S+N   I
Sbjct: 280 TLNVLDLVSIWSLLKYMNLYISTSANLYNI 309


  Database: sprot
    Posted date:  Nov 25, 2004 10:54 AM
  Number of letters in database: 59,974,054
  Number of sequences in database:  164,201
  
Lambda     K      H
   0.362    0.162    0.552 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,425,603
Number of Sequences: 164201
Number of extensions: 429857
Number of successful extensions: 6241
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 6217
Number of HSP's gapped (non-prelim): 9
length of query: 168
length of database: 59,974,054
effective HSP length: 102
effective length of query: 66
effective length of database: 43,225,552
effective search space: 2852886432
effective search space used: 2852886432
T: 11
A: 40
X1: 14 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 37 (22.0 bits)
S2: 61 (28.1 bits)