BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC124953.9 - phase: 0
(95 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
O6J2_HUMAN (Q8NGC5) Olfactory receptor 6J2 31 0.62
LNT_BRUSU (Q8FXT9) Apolipoprotein N-acyltransferase (EC 2.3.1.-)... 30 1.4
LNT_BRUME (Q8YEA6) Apolipoprotein N-acyltransferase (EC 2.3.1.-)... 30 1.4
VGLM_DUGBV (Q02004) M polyprotein precursor [Contains: Glycoprot... 29 2.4
PQQC_XANAC (Q8PHY3) Coenzyme PQQ synthesis protein C (Pyrroloqui... 29 2.4
PQQC_XANCP (Q8P6M9) Coenzyme PQQ synthesis protein C (Pyrroloqui... 28 4.0
P2Y5_CHICK (P32250) P2Y purinoceptor 5 (P2Y5) (Purinergic recept... 28 4.0
POLN_MANCV (Q69014) Non-structural polyprotein [Contains: p16; p... 28 5.2
OL41_RAT (P23269) Olfactory receptor 41 (Olfactory receptor-like... 28 5.2
MTH4_DROME (Q9V817) Probable G-protein-coupled receptor Mth-like... 27 8.9
MTH3_DROME (Q9V818) Probable G-protein-coupled receptor Mth-like... 27 8.9
>O6J2_HUMAN (Q8NGC5) Olfactory receptor 6J2
Length = 347
Score = 30.8 bits (68), Expect = 0.62
Identities = 15/46 (32%), Positives = 25/46 (53%)
Query: 47 DGGDVRWYFCKTSLAHNGMYYVLSSICSFCCINLILYYFTTLLVCI 92
D G + C + A M ++LSS+ CCI L+ Y +T +++ I
Sbjct: 179 DSGPLLALACADTTAIELMDFMLSSMVILCCIVLVAYSYTYIILTI 224
>LNT_BRUSU (Q8FXT9) Apolipoprotein N-acyltransferase (EC 2.3.1.-)
(ALP N-acyltransferase)
Length = 532
Score = 29.6 bits (65), Expect = 1.4
Identities = 11/44 (25%), Positives = 24/44 (54%)
Query: 11 LPDLLKNTPSNIARLKDVVEQSKARQKYLAHTNSSSDGGDVRWY 54
+P +L++TP +A + D +++ + +DGG+ R+Y
Sbjct: 292 IPYILESTPQALAHIGDALQEGQVLLAGAVREEKGADGGEPRYY 335
>LNT_BRUME (Q8YEA6) Apolipoprotein N-acyltransferase (EC 2.3.1.-)
(ALP N-acyltransferase)
Length = 532
Score = 29.6 bits (65), Expect = 1.4
Identities = 11/44 (25%), Positives = 24/44 (54%)
Query: 11 LPDLLKNTPSNIARLKDVVEQSKARQKYLAHTNSSSDGGDVRWY 54
+P +L++TP +A + D +++ + +DGG+ R+Y
Sbjct: 292 IPYILESTPQALAHIGDALQEGQVLLAGAVREEKGADGGEPRYY 335
>VGLM_DUGBV (Q02004) M polyprotein precursor [Contains: Glycoprotein
G2; Nonstructural protein NS-M; Glycoprotein G1]
Length = 1551
Score = 28.9 bits (63), Expect = 2.4
Identities = 22/79 (27%), Positives = 34/79 (42%), Gaps = 15/79 (18%)
Query: 28 VVEQSKARQKYLA------HTNSSSDGGDVRWYFCKTSLAHN---------GMYYVLSSI 72
+V+ S RQ YL H ++ G + YFC+ S G Y+L+ I
Sbjct: 503 MVDCSGGRQHYLEVNIVDIHCPNTKFLGGIMLYFCRMSSRPTVALLLGIWIGCGYILTCI 562
Query: 73 CSFCCINLILYYFTTLLVC 91
SF +LIL++ + C
Sbjct: 563 FSFLLYHLILFFANCIKQC 581
>PQQC_XANAC (Q8PHY3) Coenzyme PQQ synthesis protein C
(Pyrroloquinoline quinone biosynthesis protein C)
Length = 250
Score = 28.9 bits (63), Expect = 2.4
Identities = 15/33 (45%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Query: 22 IARLKDVVEQSKARQKYLAHT-NSSSDGGDVRW 53
+AR++D + RQ+ L H NS+SDGG RW
Sbjct: 64 LARMEDPALRRIWRQRILDHDGNSASDGGIARW 96
>PQQC_XANCP (Q8P6M9) Coenzyme PQQ synthesis protein C
(Pyrroloquinoline quinone biosynthesis protein C)
Length = 250
Score = 28.1 bits (61), Expect = 4.0
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 22 IARLKDVVEQSKARQKYLAHT-NSSSDGGDVRW 53
+AR++D + RQ+ L H NS SDGG RW
Sbjct: 64 LARMEDPALRRIWRQRILDHDGNSPSDGGIARW 96
>P2Y5_CHICK (P32250) P2Y purinoceptor 5 (P2Y5) (Purinergic receptor
5) (6H1)
Length = 308
Score = 28.1 bits (61), Expect = 4.0
Identities = 15/36 (41%), Positives = 18/36 (49%), Gaps = 1/36 (2%)
Query: 53 WYFCKTSLAHNGMYYVLSSIC-SFCCINLILYYFTT 87
W C A MY V I S CC + I+YYFT+
Sbjct: 257 WINCSVVTAVRTMYPVTLCIAVSNCCFDPIVYYFTS 292
>POLN_MANCV (Q69014) Non-structural polyprotein [Contains: p16; p23;
Helicase (2C-like protein) (P2C); 3A-like protein; Viral
genome-linked protein (VPg); Thiol protease P3C (EC
3.4.22.-) (3C-like protease) (3C-pro); RNA-directed RNA
polymerase (EC 2.7.7.
Length = 2208
Score = 27.7 bits (60), Expect = 5.2
Identities = 17/43 (39%), Positives = 20/43 (45%), Gaps = 2/43 (4%)
Query: 5 SNTPVLLPDLLKNTPSNIARLKDVVEQSKARQKYLAHTNSSSD 47
+NTPV L TP I L D+ S RQ Y N +SD
Sbjct: 1521 TNTPVFLKRTFTQTPHGIRALLDIT--SITRQFYWLKANRTSD 1561
>OL41_RAT (P23269) Olfactory receptor 41 (Olfactory receptor-like
protein I3)
Length = 310
Score = 27.7 bits (60), Expect = 5.2
Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 4/47 (8%)
Query: 52 RWYFCKTSLAHN---GMYYVLSSICSFCCIN-LILYYFTTLLVCIPF 94
R FC+ ++ N ++ +L CS IN L+++ +TLL+ IPF
Sbjct: 163 RLSFCENNVVLNFFCDLFVLLKLACSDTYINELMIFIMSTLLIIIPF 209
>MTH4_DROME (Q9V817) Probable G-protein-coupled receptor Mth-like 4
precursor (Methuselah-like 4 protein)
Length = 480
Score = 26.9 bits (58), Expect = 8.9
Identities = 17/62 (27%), Positives = 30/62 (47%), Gaps = 1/62 (1%)
Query: 21 NIARLKDVVEQSKARQKYLAHTNSSSDGGDVRWYFCKTSLAHNGMYYVLSSICSFCCINL 80
++ R D VE SK R+ + H + D + +FC S H+ + ++ + S CI L
Sbjct: 167 SLLRHWDKVELSK-REYCVQHLSFKDDSIRIAPHFCPLSSEHSRTWKTVAIVISLICIIL 225
Query: 81 IL 82
+
Sbjct: 226 TI 227
>MTH3_DROME (Q9V818) Probable G-protein-coupled receptor Mth-like 3
precursor (Methuselah-like 3 protein)
Length = 511
Score = 26.9 bits (58), Expect = 8.9
Identities = 17/62 (27%), Positives = 30/62 (47%), Gaps = 1/62 (1%)
Query: 21 NIARLKDVVEQSKARQKYLAHTNSSSDGGDVRWYFCKTSLAHNGMYYVLSSICSFCCINL 80
++ R D VE SK R+ + H + D + +FC S H+ + ++ + S CI L
Sbjct: 170 SLLRHWDKVELSK-REYCVQHLSFKDDSIRIAPHFCPLSSEHSRTWKTVAIVISLICIIL 228
Query: 81 IL 82
+
Sbjct: 229 TI 230
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.323 0.137 0.429
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,211,091
Number of Sequences: 164201
Number of extensions: 390324
Number of successful extensions: 1076
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 1071
Number of HSP's gapped (non-prelim): 12
length of query: 95
length of database: 59,974,054
effective HSP length: 71
effective length of query: 24
effective length of database: 48,315,783
effective search space: 1159578792
effective search space used: 1159578792
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 58 (26.9 bits)
Medicago: description of AC124953.9