BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC124217.9 + phase: 0 /pseudo
         (145 letters)

Database: sprot 
           164,201 sequences; 59,974,054 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

T9S1_MOUSE (Q9DBU0) Transmembrane 9 superfamily protein member 1...    30  2.3

>T9S1_MOUSE (Q9DBU0) Transmembrane 9 superfamily protein member 1
           precursor
          Length = 606

 Score = 29.6 bits (65), Expect = 2.3
 Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 3/45 (6%)

Query: 76  VMRLLLSKGACLSSSLTCLR---RTYRYLWRTFLFWVSPLIIVYI 117
           V  +LLS GAC+S +LT  +     YR+ WR+ L   S  + +++
Sbjct: 504 VFAILLSVGACISIALTYFQLSGEDYRWWWRSVLSVGSTGLFIFL 548


  Database: sprot
    Posted date:  Nov 25, 2004 10:54 AM
  Number of letters in database: 59,974,054
  Number of sequences in database:  164,201
  
Lambda     K      H
   0.349    0.155    0.577 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,056,983
Number of Sequences: 164201
Number of extensions: 555386
Number of successful extensions: 1623
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 1623
Number of HSP's gapped (non-prelim): 1
length of query: 145
length of database: 59,974,054
effective HSP length: 100
effective length of query: 45
effective length of database: 43,553,954
effective search space: 1959927930
effective search space used: 1959927930
T: 11
A: 40
X1: 14 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 38 (21.8 bits)
S2: 60 (27.7 bits)