BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC124216.5 - phase: 0 
         (340 letters)

Database: sprot 
           164,201 sequences; 59,974,054 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

Y7J3_ANASP (Q05070) Hypothetical protein alr4393 precursor             38  0.042
MAPA_HUMAN (P78559) Microtubule-associated protein 1A (MAP 1A) (...    38  0.042
SSP5_STRGN (P16952) Agglutinin receptor precursor (SSP-5)              37  0.093
GOA1_MOUSE (Q9CW79) Golgi autoantigen, golgin subfamily A member...    36  0.12
DLG5_HUMAN (Q8TDM6) Discs, large homolog 5 (Placenta and prostat...    36  0.12
INVO_CEBAL (P24709) Involucrin                                         35  0.21
NCAP_IBVK (P12648) Nucleocapsid protein (N structural protein) (NC)    35  0.27
NFH_HUMAN (P12036) Neurofilament triplet H protein (200 kDa neur...    35  0.35
HMSH_DROME (Q03372) Muscle segmentation homeobox (Protein Drop)        35  0.35
TP6B_METJA (Q58434) Type II DNA topoisomerase VI subunit B (EC 5...    33  0.79
NCAP_IBVAR (Q64960) Nucleocapsid protein (N structural protein) ...    33  0.79
ERC1_HUMAN (Q8IUD2) ERC protein 1 (ELKS protein)                       33  0.79
EG27_CAEEL (Q09228) Egg laying defective protein 27                    33  0.79
XRC1_MOUSE (Q60596) DNA-repair protein XRCC1                           33  1.3
SSS2_SCYCA (P11020) Spermatid-specific protein S2 (Basic nuclear...    33  1.3
NK22_BRARE (Q90481) Homeobox protein Nkx-2.2 (Homeobox protein N...    33  1.3
INVO_HUMAN (P07476) Involucrin                                         33  1.3
ERC1_MOUSE (Q99MI1) ERC protein 1 (Rab6-interacting protein 2) (...    33  1.3
INVO_PONPY (P14708) Involucrin                                         32  1.8
HME3_APIME (P09076) Homeobox protein E30 (Fragment)                    32  2.3

>Y7J3_ANASP (Q05070) Hypothetical protein alr4393 precursor
          Length = 496

 Score = 37.7 bits (86), Expect = 0.042
 Identities = 19/56 (33%), Positives = 31/56 (54%)

Query: 40  MAERDAAIQERNLALSEKKAALAERDMAFLQRDTAIAERNNALMERDNAIATLQFR 95
           +A R  AI++R+  L+ ++ AL +RD    Q D  I  RN  + +R+  IA  + R
Sbjct: 208 LANRQQAIEQRDRELANRQQALQQRDQKISQLDKIIQNRNLEIAQREEVIAKRESR 263



 Score = 37.0 bits (84), Expect = 0.071
 Identities = 24/81 (29%), Positives = 39/81 (47%), Gaps = 3/81 (3%)

Query: 13  QYKSAQGQWLMQQHQHQHPSMK-QIMSIMAERDAAIQERNLALSEKKAALAERDMAFLQR 71
           QY+ A  +  +Q   +Q  +++  +  +  ER     E   A+ ++   LA R  A  QR
Sbjct: 161 QYQKAIAE--LQSVYNQRKALQGAVEQLKTERRRLYAEAKKAIEQRDRELANRQQAIEQR 218

Query: 72  DTAIAERNNALMERDNAIATL 92
           D  +A R  AL +RD  I+ L
Sbjct: 219 DRELANRQQALQQRDQKISQL 239



 Score = 32.7 bits (73), Expect = 1.3
 Identities = 22/81 (27%), Positives = 38/81 (46%), Gaps = 1/81 (1%)

Query: 13  QYKSAQGQWLMQQHQHQHPSMKQIMSIMAERDAAIQERNLALSEKKAALAERDMAFLQRD 72
           QY+  Q +      Q+Q  ++ ++ S+  +R A         +E++   AE   A  QRD
Sbjct: 147 QYQRTQSRLGQVVTQYQK-AIAELQSVYNQRKALQGAVEQLKTERRRLYAEAKKAIEQRD 205

Query: 73  TAIAERNNALMERDNAIATLQ 93
             +A R  A+ +RD  +A  Q
Sbjct: 206 RELANRQQAIEQRDRELANRQ 226



 Score = 32.0 bits (71), Expect = 2.3
 Identities = 24/91 (26%), Positives = 43/91 (46%), Gaps = 8/91 (8%)

Query: 12  DQYKSAQG--QWLMQQHQHQHPSMKQIMSIMAERDAAIQERNLALSEKKAALAERDMAFL 69
           +Q K+ QG  + L  + +  +   K+ +    +RD  +  R  A+ ++   LA R  A  
Sbjct: 174 NQRKALQGAVEQLKTERRRLYAEAKKAIE---QRDRELANRQQAIEQRDRELANRQQALQ 230

Query: 70  QRDTAIAERNNALMERDNAIATLQFRENALA 100
           QRD  I++ +  +  R+  IA    RE  +A
Sbjct: 231 QRDQKISQLDKIIQNRNLEIAQ---REEVIA 258



 Score = 31.2 bits (69), Expect = 3.9
 Identities = 14/45 (31%), Positives = 26/45 (57%)

Query: 40  MAERDAAIQERNLALSEKKAALAERDMAFLQRDTAIAERNNALME 84
           +A R  A+Q+R+  +S+    +  R++   QR+  IA+R + L E
Sbjct: 222 LANRQQALQQRDQKISQLDKIIQNRNLEIAQREEVIAKRESRLKE 266



 Score = 30.0 bits (66), Expect = 8.7
 Identities = 23/101 (22%), Positives = 42/101 (40%), Gaps = 4/101 (3%)

Query: 5   ENGRHKADQYKSAQGQWLMQQHQHQHPSMKQIMSIMAERDAAIQERNLALSEKKAALAER 64
           E  R +A + K    Q L Q       +  ++  ++ +   AI E     +++KA     
Sbjct: 124 ETQRDQAKKEKLKAQQDLAQTQAQYQRTQSRLGQVVTQYQKAIAELQSVYNQRKALQGAV 183

Query: 65  DMAFLQRDTAIAERNNALMERDNAIA----TLQFRENALAN 101
           +    +R    AE   A+ +RD  +A     ++ R+  LAN
Sbjct: 184 EQLKTERRRLYAEAKKAIEQRDRELANRQQAIEQRDRELAN 224


>MAPA_HUMAN (P78559) Microtubule-associated protein 1A (MAP 1A)
            (Proliferation-related protein p80) [Contains: MAP1 light
            chain LC2]
          Length = 2805

 Score = 37.7 bits (86), Expect = 0.042
 Identities = 18/63 (28%), Positives = 37/63 (58%)

Query: 27   QHQHPSMKQIMSIMAERDAAIQERNLALSEKKAALAERDMAFLQRDTAIAERNNALMERD 86
            + Q  +++Q    + ++D A+++++ AL  K   L E+D A  Q+D    E++ AL ++D
Sbjct: 1402 KQQDKALEQKGRDLEQKDTALEQKDKALEPKDKDLEEKDKALEQKDKIPEEKDKALEQKD 1461

Query: 87   NAI 89
             A+
Sbjct: 1462 TAL 1464



 Score = 35.4 bits (80), Expect = 0.21
 Identities = 16/60 (26%), Positives = 35/60 (57%)

Query: 27   QHQHPSMKQIMSIMAERDAAIQERNLALSEKKAALAERDMAFLQRDTAIAERNNALMERD 86
            + +  +++Q    +  +D  ++E++ AL +K     E+D A  Q+DTA+ +++ AL  +D
Sbjct: 1416 EQKDTALEQKDKALEPKDKDLEEKDKALEQKDKIPEEKDKALEQKDTALEQKDKALEPKD 1475



 Score = 35.4 bits (80), Expect = 0.21
 Identities = 16/63 (25%), Positives = 35/63 (55%)

Query: 27   QHQHPSMKQIMSIMAERDAAIQERNLALSEKKAALAERDMAFLQRDTAIAERNNALMERD 86
            + +  +++Q   I  E+D A+++++ AL +K  AL  +D    Q+D  + ++     E+D
Sbjct: 1437 EEKDKALEQKDKIPEEKDKALEQKDTALEQKDKALEPKDKDLEQKDRVLEQKEKIPEEKD 1496

Query: 87   NAI 89
             A+
Sbjct: 1497 KAL 1499



 Score = 33.9 bits (76), Expect = 0.60
 Identities = 14/50 (28%), Positives = 30/50 (60%)

Query: 40   MAERDAAIQERNLALSEKKAALAERDMAFLQRDTAIAERNNALMERDNAI 89
            + E+D A+++++    EK  AL ++D A  Q+D A+  ++  L ++D  +
Sbjct: 1436 LEEKDKALEQKDKIPEEKDKALEQKDTALEQKDKALEPKDKDLEQKDRVL 1485



 Score = 32.7 bits (73), Expect = 1.3
 Identities = 14/47 (29%), Positives = 30/47 (63%)

Query: 43   RDAAIQERNLALSEKKAALAERDMAFLQRDTAIAERNNALMERDNAI 89
            ++ A+++++ AL +K   L ++D A  Q+D A+  ++  L E+D A+
Sbjct: 1397 KNEAVKQQDKALEQKGRDLEQKDTALEQKDKALEPKDKDLEEKDKAL 1443



 Score = 31.2 bits (69), Expect = 3.9
 Identities = 13/45 (28%), Positives = 28/45 (61%)

Query: 42   ERDAAIQERNLALSEKKAALAERDMAFLQRDTAIAERNNALMERD 86
            ++D A+  +N A+ ++  AL ++     Q+DTA+ +++ AL  +D
Sbjct: 1389 QKDEALHVKNEAVKQQDKALEQKGRDLEQKDTALEQKDKALEPKD 1433


>SSP5_STRGN (P16952) Agglutinin receptor precursor (SSP-5)
          Length = 1500

 Score = 36.6 bits (83), Expect = 0.093
 Identities = 33/144 (22%), Positives = 61/144 (41%), Gaps = 9/144 (6%)

Query: 61   LAERDMAFLQRDTAIAERNNALMERDNAIATLQFRENALANGGMSSCPPGCQISRGVKHI 120
            L  +D + ++  T +  +  A  +  N I T++F+E+ L    + S P   +    ++ I
Sbjct: 1328 LTMKDGSVIKAGTDLTSQTTAETDATNGIVTVRFKEDFLQKISLDS-PFQAETYLQMRRI 1386

Query: 121  HHLPQQVNHLPNMGDSSYGTRELHTTDALPAAP-----VSLEVGKPPRRAKRPKESKSDS 175
                 +  ++  +   +Y +  + TT  +P  P     +     K P + + PKE K  S
Sbjct: 1387 AIGTFENTYVNTVNKVAYASNTVRTTTPIPRTPDKPTPIPTPKPKDPDKPETPKEPKVPS 1446

Query: 176  PNKKTPKSR---KVKKEGDDLNKT 196
            P  + P +     V KE   L KT
Sbjct: 1447 PKVEDPSAPIPVSVGKELTTLPKT 1470


>GOA1_MOUSE (Q9CW79) Golgi autoantigen, golgin subfamily A member 1
           (Golgin-97)
          Length = 758

 Score = 36.2 bits (82), Expect = 0.12
 Identities = 47/233 (20%), Positives = 88/233 (37%), Gaps = 30/233 (12%)

Query: 11  ADQYKSAQGQWLMQQH---------------QHQHPSMKQIMSIMAERDAAIQERNLALS 55
           ADQ  S QG   +QQ                QH    +K++    ++R+        AL 
Sbjct: 428 ADQIASEQGMLQLQQENVALKESRNECEHSLQHHQLELKKLKDEWSQREIVSVAMAQALE 487

Query: 56  EKKAALAERDMAFLQRDTAIAERNNALMERDNAIATLQFRENALANGGMSSCPPGCQISR 115
           E +    E      +    I E+N +L E+D A+   +     L  G  S+     ++ R
Sbjct: 488 EVRKQREEFQQQATELTAIIEEKNQSLCEKDEALLQKEQELRQLEKGHSSALLQMHKLQR 547

Query: 116 GVKHIHHLPQQVNHLPNMGDSSYGTRELHTTDALP-AAPVSLEVGKPPRRAKRPKESKSD 174
            ++ +     Q       G+           D LP      L + K  + ++    +   
Sbjct: 548 ELEALKTCKAQEAMPATTGE-----------DCLPLQGQEPLVISKAMQNSEYELPAAEG 596

Query: 175 SPNKKTPKS--RKVKKEGDDLNKTMFANNKELEWKSSEEIINGDDDLNKQLAI 225
           +PN +   S  ++++KE  DL + +   NK ++ +  + ++     L K+L I
Sbjct: 597 TPNGEVGASDLKQLQKEKQDLEQQLIEKNKIMK-QMQQRMLELKKTLQKELKI 648


>DLG5_HUMAN (Q8TDM6) Discs, large homolog 5 (Placenta and prostate
           DLG) (Discs large protein P-dlg)
          Length = 1809

 Score = 36.2 bits (82), Expect = 0.12
 Identities = 23/66 (34%), Positives = 32/66 (47%), Gaps = 7/66 (10%)

Query: 34  KQIMSIMAERDAAIQERNLALSEKKAALAERDMAFLQRDTAIAER-------NNALMERD 86
           K++  +  +  A  QE   AL E   A   RD AF +RD  +AER       +N   ERD
Sbjct: 383 KEVEILRKQCKALCQELKEALQEADVAKCRRDWAFQERDKIVAERDSIRTLCDNLRRERD 442

Query: 87  NAIATL 92
            A++ L
Sbjct: 443 RAVSEL 448


>INVO_CEBAL (P24709) Involucrin
          Length = 428

 Score = 35.4 bits (80), Expect = 0.21
 Identities = 45/202 (22%), Positives = 78/202 (38%), Gaps = 39/202 (19%)

Query: 9   HKADQYKSAQGQWLMQQH-----QHQHPSMKQIMSIMAERDAAIQERNLALSEKKAALAE 63
           H+ +Q + AQGQ   QQH     +HQ     +      E     Q+    L E+K  L +
Sbjct: 73  HECEQQQQAQGQERQQQHWGQNKEHQKAGNPEQQLKQEEAQREKQQLQGQLEEEKKLLDQ 132

Query: 64  R-DMAFLQRDTAIAERNNALME----RDNAIATLQFRENALANGGMSSCPPGC--QISRG 116
           + D    +RD  +  +   L+E    ++  +  L+ +E  L      S  P    Q    
Sbjct: 133 QLDQELAKRDDQLGTKKKQLLEFPEQQEGQLKHLEQQEKPLELPEQQSGQPKYLEQQEGQ 192

Query: 117 VKHIHHLPQQVNHLPNMGDSSYGTRELHTTDALPAAPVSLEVGKPPRRAKRPK-----ES 171
           +KH+     Q+ HL    +   G  EL                  P +  +PK     E 
Sbjct: 193 LKHLEEQKGQLKHL----EQQEGQLEL------------------PEQVDQPKHLEQLEK 230

Query: 172 KSDSPNKKTPKSRKVKKEGDDL 193
           + + P ++  K +K+++E + L
Sbjct: 231 QLEHPEQQEGKLKKLEEEEEQL 252


>NCAP_IBVK (P12648) Nucleocapsid protein (N structural protein) (NC)
          Length = 409

 Score = 35.0 bits (79), Expect = 0.27
 Identities = 19/65 (29%), Positives = 35/65 (53%), Gaps = 7/65 (10%)

Query: 160 KPPRRAKRPKESKSDSPNKKTP---KSRKVKKEGDDLNKTMFA----NNKELEWKSSEEI 212
           KP  R+     +++ SP  + P   K +K KK+ D+++K + +    NN +LE+    ++
Sbjct: 337 KPKSRSSSRPATRTSSPAPRQPRPKKEKKTKKQDDEVDKALTSDEERNNAQLEFDDEPKV 396

Query: 213 INGDD 217
           IN  D
Sbjct: 397 INWGD 401


>NFH_HUMAN (P12036) Neurofilament triplet H protein (200 kDa
           neurofilament protein) (Neurofilament heavy polypeptide)
           (NF-H)
          Length = 1026

 Score = 34.7 bits (78), Expect = 0.35
 Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 1/60 (1%)

Query: 152 APVSLEVGKPPRRAKRPKESKSDSPNKKTPKSRKVKKEGDDLNKTMFANNKELEWKSSEE 211
           +PV  EV K P +AK P +  + +P K+ PK  +VK    +  K      KE   K+ EE
Sbjct: 793 SPVKEEV-KSPEKAKSPLKEDAKAPEKEIPKKEEVKSPVKEEEKPQEVKVKEPPKKAEEE 851


>HMSH_DROME (Q03372) Muscle segmentation homeobox (Protein Drop)
          Length = 515

 Score = 34.7 bits (78), Expect = 0.35
 Identities = 37/175 (21%), Positives = 65/175 (37%), Gaps = 2/175 (1%)

Query: 17  AQGQWLMQQHQHQHPSMKQIMSIMAERDAAIQERNLALSEKKAALAERDMAFLQRDTAIA 76
           A  Q L+QQHQ      +Q     A + AA+      L +  + L+   +A L  DT   
Sbjct: 87  AHQQHLLQQHQQHQQQQQQQQQAAALQLAAVHPPAHHLHKTTSRLSNFSVASLLADTRPR 146

Query: 77  ERNNALMERDNAIATLQFRENALANGGMSSCPPGCQISRGVKHIHHLPQQVNHLPNMGDS 136
              N   +    + T     + ++    +  PP    +  V      P  V H  ++  +
Sbjct: 147 TPPNQAADGPQNL-TSSAATSPISQASSTPPPPPASAAAQVPANTFHPAAVAHHAHLLQA 205

Query: 137 SYGTRELHTTDALPAAPVSLEVGKPPRRAKRPKESKSDSPNKKTPKSRKVKKEGD 191
           ++     H      AA +  +  +   RA  P  S S +P+  TP    +  +G+
Sbjct: 206 AHAAAAAHAQHQAMAAQLRQQQQQADARANSPPASTSSTPS-STPLGSALGSQGN 259


>TP6B_METJA (Q58434) Type II DNA topoisomerase VI subunit B (EC
           5.99.1.3) (TopoVI-B)
          Length = 660

 Score = 33.5 bits (75), Expect = 0.79
 Identities = 16/49 (32%), Positives = 26/49 (52%)

Query: 166 KRPKESKSDSPNKKTPKSRKVKKEGDDLNKTMFANNKELEWKSSEEIIN 214
           K P+E  ++  NK      ++KK  D++   +  N KEL W  +E I+N
Sbjct: 400 KNPEEFIAEIKNKGLISDEELKKFEDEVKSILNKNPKELTWDEAEMIVN 448


>NCAP_IBVAR (Q64960) Nucleocapsid protein (N structural protein)
           (NC)
          Length = 409

 Score = 33.5 bits (75), Expect = 0.79
 Identities = 22/77 (28%), Positives = 39/77 (50%), Gaps = 6/77 (7%)

Query: 147 DALPAAPVSLEVGKPPRRAKRPK-ESKSDSPNKKTP-KSRKVKKEGDDLNKTMFA----N 200
           D +   P   E     R + RP   + S +P ++ P K +K KK+ D+++K + +    N
Sbjct: 325 DGVGTRPKDDEPRPKSRSSSRPATRTSSPAPRQQRPKKEKKPKKQDDEVDKALTSNEERN 384

Query: 201 NKELEWKSSEEIINGDD 217
           N +LE+    ++IN  D
Sbjct: 385 NAQLEFDEEPKVINWGD 401


>ERC1_HUMAN (Q8IUD2) ERC protein 1 (ELKS protein)
          Length = 1116

 Score = 33.5 bits (75), Expect = 0.79
 Identities = 23/91 (25%), Positives = 42/91 (45%), Gaps = 6/91 (6%)

Query: 6   NGRHKADQYKSAQGQWLMQQHQHQ---HPSMKQIMSIMAERDAAIQERNLALSEKKAALA 62
           N +HK    K    Q L +  + +   + S +Q+   + ++D  I+E   AL E     A
Sbjct: 795 NLKHKEQVEKKKSAQMLEEARRREDNLNDSSQQLQDSLRKKDDRIEELEEALRESVQITA 854

Query: 63  ERDMAFLQRDTAIAERNNALMERDNAIATLQ 93
           ER+M   Q ++A   R NA  + +  +  ++
Sbjct: 855 EREMVLAQEESA---RTNAEKQVEELLMAME 882


>EG27_CAEEL (Q09228) Egg laying defective protein 27
          Length = 1129

 Score = 33.5 bits (75), Expect = 0.79
 Identities = 39/151 (25%), Positives = 61/151 (39%), Gaps = 28/151 (18%)

Query: 2    DDRENGRHKADQYKSAQGQWLMQQHQHQH---------PSMKQIMSIMAERDAAIQERNL 52
            + RE    + ++    Q Q  + Q Q QH         P+M Q+M++MA   AA Q+   
Sbjct: 919  EQREQRERERERQHQQQAQQALHQQQQQHAAAAANQLNPAMMQMMALMA-NSAASQQDIA 977

Query: 53   ALSEKKA-----------ALAERDMAFLQRD------TAIAERNNALMERDNAIATLQFR 95
             L E  A           A A+RD    +R+       A  ER      R+ A      R
Sbjct: 978  RLMEMAAQQQQQQQQAAQAQAQRDQERERREREAREREAAREREREQAAREAAARDQAAR 1037

Query: 96   ENALANGGMSSCPPGCQ-ISRGVKHIHHLPQ 125
            E+A A    ++     Q ++  ++H+H L Q
Sbjct: 1038 EHAQAVQAAAAAAQQAQALTPDMQHMHLLQQ 1068


>XRC1_MOUSE (Q60596) DNA-repair protein XRCC1
          Length = 631

 Score = 32.7 bits (73), Expect = 1.3
 Identities = 26/96 (27%), Positives = 37/96 (38%), Gaps = 8/96 (8%)

Query: 123 LPQQVNHLPNMGDSSYGTRELHTTDALPAAPVSLEVGKPPRRAKRPKESKSDSPNKKTPK 182
           LP +   +  +G SS    + H+      AP  L   +P  +AK      S  P   TPK
Sbjct: 396 LPSRRYLMAGLGSSSEDEGDSHSESGEDEAP-KLPQKRPQPKAKTQAAGPSSPPRPPTPK 454

Query: 183 SRKVKKEGDDLNKTMFANNKELEWKSSEEIINGDDD 218
             K    G         +N + E + SE   NG +D
Sbjct: 455 ETKAPSPGPQ-------DNSDTEGEESEGRDNGAED 483


>SSS2_SCYCA (P11020) Spermatid-specific protein S2 (Basic nuclear
           protein S2)
          Length = 80

 Score = 32.7 bits (73), Expect = 1.3
 Identities = 18/45 (40%), Positives = 30/45 (66%), Gaps = 2/45 (4%)

Query: 160 KPPRRAKRPKESKSDSPNKKTPKSRKVKKEGDDLNKTMFANNKEL 204
           KP RR K P++ +  +P+KK PK  K+K + ++++ T+ A NK L
Sbjct: 24  KPKRRPKPPRKLRY-APSKKQPKIMKLKLD-NEVDNTLKAKNKSL 66


>NK22_BRARE (Q90481) Homeobox protein Nkx-2.2 (Homeobox protein NK-2
           homolog B)
          Length = 269

 Score = 32.7 bits (73), Expect = 1.3
 Identities = 24/94 (25%), Positives = 43/94 (45%), Gaps = 6/94 (6%)

Query: 102 GGMSSCPPGCQISRGVKHIHHLPQQVNHLPNMGDSSYGTRELHTTDALPAAPVSLEVGKP 161
           G  ++  PG  +   ++++ +LP + N   +  D+ Y TR L TTD++  +   L     
Sbjct: 37  GSEATKTPGVLVQSPLENVQNLPLK-NPFYDNSDNPY-TRWLATTDSIQYSLHGLSANSQ 94

Query: 162 PRRAKRPKESKSDSPNKKTPKSRKVKKEGDDLNK 195
              AK P+ S  +SP+      ++    G D  K
Sbjct: 95  DTSAKSPEPSADESPD----NDKETSSNGSDSGK 124


>INVO_HUMAN (P07476) Involucrin
          Length = 585

 Score = 32.7 bits (73), Expect = 1.3
 Identities = 22/77 (28%), Positives = 35/77 (44%), Gaps = 5/77 (6%)

Query: 13  QYKSAQGQWLMQQHQHQHPSMKQI----MSIMAERDAAIQERNLALSEKKAALAER-DMA 67
           Q K  Q Q L QQH  QH   ++       +  E+    Q+ N  L E+K  L ++ D  
Sbjct: 78  QQKEPQEQELQQQHWEQHEEYQKAENPEQQLKQEKTQRDQQLNKQLEEEKKLLDQQLDQE 137

Query: 68  FLQRDTAIAERNNALME 84
            ++RD  +  +   L+E
Sbjct: 138 LVKRDEQLGMKKEQLLE 154


>ERC1_MOUSE (Q99MI1) ERC protein 1 (Rab6-interacting protein 2)
           (Rab6IP2) (CAZ-associated structural protein 2) (CAST2)
          Length = 1120

 Score = 32.7 bits (73), Expect = 1.3
 Identities = 23/91 (25%), Positives = 41/91 (44%), Gaps = 6/91 (6%)

Query: 6   NGRHKADQYKSAQGQWLMQQHQHQHP---SMKQIMSIMAERDAAIQERNLALSEKKAALA 62
           N +HK    K    Q L +  + +     S +Q+   + ++D  I+E   AL E     A
Sbjct: 799 NLKHKEQVEKKKSAQMLEEARRREDSLSDSSQQLQDSLRKKDDRIEELEEALRESVQITA 858

Query: 63  ERDMAFLQRDTAIAERNNALMERDNAIATLQ 93
           ER+M   Q ++A   R NA  + +  +  ++
Sbjct: 859 EREMVLAQEESA---RTNAEKQVEELLMAME 886


>INVO_PONPY (P14708) Involucrin
          Length = 835

 Score = 32.3 bits (72), Expect = 1.8
 Identities = 25/80 (31%), Positives = 37/80 (46%), Gaps = 11/80 (13%)

Query: 13  QYKSAQGQWLMQQHQHQHPS-------MKQIMSIMAERDAAIQERNLALSEKKAALAER- 64
           Q +  Q Q L QQH  QH          +Q+    A+RD   Q+ N  L E+K  L +R 
Sbjct: 78  QQQEPQEQELQQQHWEQHEEHQKAENPEQQLKQEKAQRD---QQLNEQLEEEKKLLDQRL 134

Query: 65  DMAFLQRDTAIAERNNALME 84
           D   ++RD  +  +   L+E
Sbjct: 135 DQELVKRDEQLGMKKEQLLE 154


>HME3_APIME (P09076) Homeobox protein E30 (Fragment)
          Length = 109

 Score = 32.0 bits (71), Expect = 2.3
 Identities = 31/105 (29%), Positives = 47/105 (44%), Gaps = 19/105 (18%)

Query: 159 GKPPRRAKRPKESKSDSPNKKTPKSRKVKKEGDDLNKTMFANNKELEWKSSEEIINGDDD 218
           G   RR KR    K+ SP +K P++    ++   L K  FA N+ L  +  +++     D
Sbjct: 1   GPRTRRVKRSHNGKNGSPEEKRPRTAFSAEQLARL-KREFAENRYLTERRRQQL---SRD 56

Query: 219 L------------NKQLAISKADWKPQDLALNQVA---YDDSTMP 248
           L            NK+  I KA  +   LAL  +A   Y+ ST+P
Sbjct: 57  LGLTEAQIKIWFQNKRAKIKKASGQKNPLALQLMAQGLYNHSTVP 101


  Database: sprot
    Posted date:  Nov 25, 2004 10:54 AM
  Number of letters in database: 59,974,054
  Number of sequences in database:  164,201
  
Lambda     K      H
   0.314    0.128    0.385 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 41,507,556
Number of Sequences: 164201
Number of extensions: 1764753
Number of successful extensions: 5239
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 49
Number of HSP's that attempted gapping in prelim test: 5165
Number of HSP's gapped (non-prelim): 114
length of query: 340
length of database: 59,974,054
effective HSP length: 111
effective length of query: 229
effective length of database: 41,747,743
effective search space: 9560233147
effective search space used: 9560233147
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 66 (30.0 bits)