BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC124216.10 - phase: 0 
         (543 letters)

Database: sprot 
           164,201 sequences; 59,974,054 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

GAOA_DACDE (Q01745) Galactose oxidase precursor (EC 1.1.3.9) (GAO)     90  1e-17
PPA_ECOLI (P07102) Periplasmic appA protein precursor [Includes:...    32  3.2
SUCC_THETH (P25126) Succinyl-CoA synthetase beta chain (EC 6.2.1...    31  9.4

>GAOA_DACDE (Q01745) Galactose oxidase precursor (EC 1.1.3.9) (GAO)
          Length = 680

 Score = 90.1 bits (222), Expect = 1e-17
 Identities = 118/449 (26%), Positives = 190/449 (42%), Gaps = 51/449 (11%)

Query: 109 DVWCSSGSVNPKGTLVQTGGYNDGDRTIRMFDTCNNCDWQEFDGGLAARRWYATNHILPD 168
           D++C   S++  G +V TGG ND  +T  ++D+ ++  W      +   R Y ++  + D
Sbjct: 266 DMFCPGISMDGNGQIVVTGG-NDAKKT-SLYDSSSD-SWIP-GPDMQVARGYQSSATMSD 321

Query: 169 GRQIIIGGRKQFNYEFYPKNNIGVYRLPFLEQTNDAGAENNLYPFVILNVDGNLFIFANN 228
           GR   IGG   ++   + KN   VY       T+   A+ N     +L  D      ++N
Sbjct: 322 GRVFTIGG--SWSGGVFEKNG-EVYSPSSKTWTSLPNAKVN----PMLTADKQGLYRSDN 374

Query: 229 RAILFDYTKNVVVRTFPQIPGGDPRSYPSSGSGVLLPLKNLQSKFIEAEVLICGGAPKGS 288
            A LF + K  V   F   P      Y +SGSG +      QS    A   +CG A    
Sbjct: 375 HAWLFGWKKGSV---FQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYD 431

Query: 289 YQKASKREFLGA-------LNTCARIKI-----TDPNPTWVVETMPRARVMGDMVMLPNG 336
             K     F G+         T A I       T PN  +    +  AR     V+LP+G
Sbjct: 432 AVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDG 491

Query: 337 DVLIINGAGSGTAGWEYGRDPVLNPVLYKTNNPIGARFELQNPSHTPRMYHSTAILVRDG 396
              I  G   G    +    PV  P +Y    P    F  QNP+   R+YHS ++L+ DG
Sbjct: 492 STFITGGQRRGIPFED--STPVFTPEIYV---PEQDTFYKQNPNSIVRVYHSISLLLPDG 546

Query: 397 RVLVGGSNPHIGYNFNNVLFPTELSIEAFSPSYLEPRFANV--RPRIVASTSELQKHGQK 454
           RV  GG         N+         + F+P+YL     N+  RP+I  ++++  K G +
Sbjct: 547 RVFNGGGGLCGDCTTNH------FDAQIFTPNYLYNSNGNLATRPKITRTSTQSVKVGGR 600

Query: 455 LGLRFQVKAALDKNLVYVTMLAPPFNTHSFSMNQRLLVLESNKVNIVEGTTYDVQVTMPG 514
           + +      + D ++   +++     TH+ + +QR + L         G +Y  QV  P 
Sbjct: 601 ITI------STDSSISKASLIRYGTATHTVNTDQRRIPLTLTNNG---GNSYSFQV--PS 649

Query: 515 SPILAPPGFYLLFVVHKE-IPSEGIWIQI 542
              +A PG+++LFV++   +PS    I++
Sbjct: 650 DSGVALPGYWMLFVMNSAGVPSVASTIRV 678


>PPA_ECOLI (P07102) Periplasmic appA protein precursor [Includes:
           Phosphoanhydride phosphohydrolase (EC 3.1.3.2) (pH 2.5
           acid phosphatase) (AP); 4-phytase (EC 3.1.3.26)]
          Length = 432

 Score = 32.3 bits (72), Expect = 3.2
 Identities = 20/86 (23%), Positives = 36/86 (41%), Gaps = 1/86 (1%)

Query: 458 RFQVKAALDKNLVYVTMLAPPFNTHSFSMNQRLLVLESNKVNIVE-GTTYDVQVTMPGSP 516
           R +    LD     +T   P    +  ++   +L +  +  N+   G   ++  T+PG P
Sbjct: 287 RSRATPLLDLIKTALTPHPPQKQAYGVTLPTSVLFIAGHDTNLANLGGALELNWTLPGQP 346

Query: 517 ILAPPGFYLLFVVHKEIPSEGIWIQI 542
              PPG  L+F   + +     WIQ+
Sbjct: 347 DNTPPGGELVFERWRRLSDNSQWIQV 372


>SUCC_THETH (P25126) Succinyl-CoA synthetase beta chain (EC 6.2.1.5)
           (SCS-beta)
          Length = 378

 Score = 30.8 bits (68), Expect = 9.4
 Identities = 22/76 (28%), Positives = 36/76 (46%), Gaps = 12/76 (15%)

Query: 192 VYRLPFLEQTNDAGAENNL------YPFVILNVDGNLFIFANNRAILFDYTKNVVVRTFP 245
           ++R P L +  +  AE+ L      Y F  + +DGN+ I  N   ++  YT ++V R   
Sbjct: 214 LFRHPDLAELREVEAEHPLEVEASNYGFAYVKLDGNIGIIGNGAGLVM-YTLDLVNRV-- 270

Query: 246 QIPGGDPRSYPSSGSG 261
              GG P ++   G G
Sbjct: 271 ---GGKPANFLDIGGG 283


  Database: sprot
    Posted date:  Nov 25, 2004 10:54 AM
  Number of letters in database: 59,974,054
  Number of sequences in database:  164,201
  
Lambda     K      H
   0.321    0.139    0.427 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 70,003,199
Number of Sequences: 164201
Number of extensions: 3223250
Number of successful extensions: 6271
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 6265
Number of HSP's gapped (non-prelim): 3
length of query: 543
length of database: 59,974,054
effective HSP length: 115
effective length of query: 428
effective length of database: 41,090,939
effective search space: 17586921892
effective search space used: 17586921892
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 68 (30.8 bits)