
BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC124215.1 + phase: 0
(45 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
MOC_ORYSA (Q84MM9) Protein MONOCULM 1 38 0.006
DPHB_METMP (Q6LZN6) Probable diphthine synthase (EC 2.1.1.98) (D... 32 0.42
FBP1_STRPU (P10079) Fibropellin I precursor (Epidermal growth fa... 28 4.7
PLM1_PLAFA (P39898) Plasmepsin 1 precursor (EC 3.4.23.38) (Aspar... 27 8.0
>MOC_ORYSA (Q84MM9) Protein MONOCULM 1
Length = 441
Score = 37.7 bits (86), Expect = 0.006
Identities = 16/32 (50%), Positives = 21/32 (65%)
Query: 2 FPSEGYTLVEDNGILKLGWKDLCLLTASAWRP 33
+PSEGY + E G LGW+ LL+ SAW+P
Sbjct: 407 YPSEGYLVQEARGACFLGWQTRPLLSVSAWQP 438
>DPHB_METMP (Q6LZN6) Probable diphthine synthase (EC 2.1.1.98)
(Diphthamide biosynthesis methyltransferase)
Length = 255
Score = 31.6 bits (70), Expect = 0.42
Identities = 17/38 (44%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Query: 2 FPSEGYTLVEDNGILKLGWKDLCLLTASAWRPPFHTNN 39
FP Y +++DN LKLG+ LCLL A + F T N
Sbjct: 142 FPETPYDVIKDN--LKLGYHTLCLLDIQADKERFMTAN 177
>FBP1_STRPU (P10079) Fibropellin I precursor (Epidermal growth
factor-related protein 1) (UEGF-1)
Length = 1064
Score = 28.1 bits (61), Expect = 4.7
Identities = 12/25 (48%), Positives = 14/25 (56%)
Query: 2 FPSEGYTLVEDNGILKLGWKDLCLL 26
FPS G+T+V DNG W C L
Sbjct: 993 FPSFGFTVVRDNGQSTTSWTGQCHL 1017
>PLM1_PLAFA (P39898) Plasmepsin 1 precursor (EC 3.4.23.38) (Aspartic
hemoglobinase I) (PFAPG)
Length = 452
Score = 27.3 bits (59), Expect = 8.0
Identities = 11/19 (57%), Positives = 15/19 (78%)
Query: 7 YTLVEDNGILKLGWKDLCL 25
YTL + +GI+ LGWKDL +
Sbjct: 238 YTLGQFDGIVGLGWKDLSI 256
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.322 0.141 0.490
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,432,794
Number of Sequences: 164201
Number of extensions: 164532
Number of successful extensions: 248
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 245
Number of HSP's gapped (non-prelim): 4
length of query: 45
length of database: 59,974,054
effective HSP length: 21
effective length of query: 24
effective length of database: 56,525,833
effective search space: 1356619992
effective search space used: 1356619992
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 59 (27.3 bits)
Medicago: description of AC124215.1