Medicago
BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC124215.1 + phase: 0 
         (45 letters)

Database: sprot 
           164,201 sequences; 59,974,054 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

MOC_ORYSA (Q84MM9) Protein MONOCULM 1                                  38  0.006
DPHB_METMP (Q6LZN6) Probable diphthine synthase (EC 2.1.1.98) (D...    32  0.42
FBP1_STRPU (P10079) Fibropellin I precursor (Epidermal growth fa...    28  4.7
PLM1_PLAFA (P39898) Plasmepsin 1 precursor (EC 3.4.23.38) (Aspar...    27  8.0

>MOC_ORYSA (Q84MM9) Protein MONOCULM 1
          Length = 441

 Score = 37.7 bits (86), Expect = 0.006
 Identities = 16/32 (50%), Positives = 21/32 (65%)

Query: 2   FPSEGYTLVEDNGILKLGWKDLCLLTASAWRP 33
           +PSEGY + E  G   LGW+   LL+ SAW+P
Sbjct: 407 YPSEGYLVQEARGACFLGWQTRPLLSVSAWQP 438


>DPHB_METMP (Q6LZN6) Probable diphthine synthase (EC 2.1.1.98)
           (Diphthamide biosynthesis methyltransferase)
          Length = 255

 Score = 31.6 bits (70), Expect = 0.42
 Identities = 17/38 (44%), Positives = 22/38 (57%), Gaps = 2/38 (5%)

Query: 2   FPSEGYTLVEDNGILKLGWKDLCLLTASAWRPPFHTNN 39
           FP   Y +++DN  LKLG+  LCLL   A +  F T N
Sbjct: 142 FPETPYDVIKDN--LKLGYHTLCLLDIQADKERFMTAN 177


>FBP1_STRPU (P10079) Fibropellin I precursor (Epidermal growth
            factor-related protein 1) (UEGF-1)
          Length = 1064

 Score = 28.1 bits (61), Expect = 4.7
 Identities = 12/25 (48%), Positives = 14/25 (56%)

Query: 2    FPSEGYTLVEDNGILKLGWKDLCLL 26
            FPS G+T+V DNG     W   C L
Sbjct: 993  FPSFGFTVVRDNGQSTTSWTGQCHL 1017


>PLM1_PLAFA (P39898) Plasmepsin 1 precursor (EC 3.4.23.38) (Aspartic
           hemoglobinase I) (PFAPG)
          Length = 452

 Score = 27.3 bits (59), Expect = 8.0
 Identities = 11/19 (57%), Positives = 15/19 (78%)

Query: 7   YTLVEDNGILKLGWKDLCL 25
           YTL + +GI+ LGWKDL +
Sbjct: 238 YTLGQFDGIVGLGWKDLSI 256


  Database: sprot
    Posted date:  Nov 25, 2004 10:54 AM
  Number of letters in database: 59,974,054
  Number of sequences in database:  164,201
  
Lambda     K      H
   0.322    0.141    0.490 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,432,794
Number of Sequences: 164201
Number of extensions: 164532
Number of successful extensions: 248
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 245
Number of HSP's gapped (non-prelim): 4
length of query: 45
length of database: 59,974,054
effective HSP length: 21
effective length of query: 24
effective length of database: 56,525,833
effective search space: 1356619992
effective search space used: 1356619992
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 59 (27.3 bits)


Medicago: description of AC124215.1