BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC124214.17 - phase: 0
(362 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
YJ23_SCHPO (Q9USJ3) Hypothetical protein C4B3.03c in chromosome III 164 3e-40
YN87_MYCBO (P67131) Hypothetical UPF0053 protein Mb2387c 80 6e-15
YN66_MYCTU (P67130) Hypothetical UPF0053 protein Rv2366c/MT2435 80 6e-15
YHDP_BACSU (O07585) Hypothetical UPF0053 protein yhdP 72 3e-12
YC54_SYNY3 (P74078) Hypothetical UPF0053 protein sll1254 71 4e-12
YQHB_BACSU (P54505) Hypothetical UPF0053 protein yqhB 69 2e-11
YI41_MYCTU (Q50593) Hypothetical protein Rv1841c/MT1889 67 5e-11
CORC_BUCAP (Q8K9C0) Magnesium and cobalt efflux protein corC 67 5e-11
YUGS_BACSU (O05241) Hypothetical UPF0053 protein yugS 65 2e-10
CORC_ECOLI (P77392) Magnesium and cobalt efflux protein corC 65 3e-10
CORC_VIBCH (Q9KTE3) Magnesium and cobalt efflux protein corC 64 5e-10
CORC_SALTY (Q9R874) Magnesium and cobalt efflux protein corC 64 6e-10
YRKA_BACSU (P54428) Hypothetical UPF0053 protein yrkA 64 8e-10
Y740_RICPR (O05961) Hypothetical UPF0053 protein RP740 61 4e-09
YFJD_ECOLI (P37908) Hypothetical UPF0053 protein yfjD 60 7e-09
YHDT_BACSU (O07589) Hypothetical UPF0053 protein yhdT 57 7e-08
CORC_HAEIN (Q57368) Magnesium and cobalt efflux protein corC 57 7e-08
YTFL_ECOLI (P39319) Hypothetical UPF0053 protein ytfL 55 2e-07
Y452_HAEIN (P44717) Hypothetical UPF0053 protein HI0452 55 2e-07
CORC_PASMU (Q9CM13) Magnesium and cobalt efflux protein corC 55 4e-07
>YJ23_SCHPO (Q9USJ3) Hypothetical protein C4B3.03c in chromosome III
Length = 679
Score = 164 bits (415), Expect = 3e-40
Identities = 86/223 (38%), Positives = 138/223 (61%), Gaps = 4/223 (1%)
Query: 22 QALPIFLDSLVTA-WGAILISVTLILLFGEIIPQSVCSRYGLAIGASVTPFVRVLVWICY 80
+ LPI DS++ W A+LIS +I++FGE+IPQ+ C RYGL+IGA + P V ++++ +
Sbjct: 136 ETLPIVFDSIIGGGWPAVLISTAMIVIFGEVIPQATCVRYGLSIGAKLEPIVLFMMYLLW 195
Query: 81 PVAFPISKLLDYLLGHRNEALFRRAELKTLVDLHGNEAGKGGELTHDETTIIAGALELSE 140
P+A+P + +LD LG +++++ LKTLV LH + G +L DE TII L+L E
Sbjct: 196 PIAYPTALILDACLGESQSTMYKKSGLKTLVTLH-RDLGI-DKLNQDEVTIITAVLDLRE 253
Query: 141 KTASDAMTPISETFAIDINSKLDRELMTEILEKGHSRVPVYYEQ-STNIIGLILIKNLLT 199
K A MTPI + F + ++ LD +L+ EI+ G+SR+PV+ + IG++L K L+
Sbjct: 254 KHAESIMTPIEDVFTLPMDRILDEDLIGEIICAGYSRIPVHKPGFPHDFIGMLLTKTLIG 313
Query: 200 IHPEDESPVKSVTIRRIPRVPESMPLYDILNEFQKGHSHMAVV 242
P+D+ PV + +P+ + D+LN Q+G SHM ++
Sbjct: 314 YDPDDKWPVGKFALATLPQTWPNTSCLDLLNYCQEGKSHMILI 356
Score = 42.7 bits (99), Expect = 0.001
Identities = 22/47 (46%), Positives = 31/47 (65%), Gaps = 4/47 (8%)
Query: 314 SDILEIDGSPLPNIPEEEEAVGIITMEDVIEELLQEEIFDETDHHFE 360
S ++ I SP E A+G+IT+ED+IEEL+ EEI DETD + +
Sbjct: 351 SHMILISNSP----GEPHGAIGVITLEDIIEELIGEEIIDETDVYID 393
>YN87_MYCBO (P67131) Hypothetical UPF0053 protein Mb2387c
Length = 435
Score = 80.5 bits (197), Expect = 6e-15
Identities = 60/219 (27%), Positives = 109/219 (49%), Gaps = 15/219 (6%)
Query: 35 WGAILISVTLILLFGEII---PQSVCSRYGLAIGASVTPFVRVLVWICYPVAFPISKLLD 91
WG L + ++L ++ P+++ + +I + +R++ W+ P++ + L +
Sbjct: 90 WGLYLAAGIMVLASFVVVGVGPRTLGRQNAYSISLATALPLRLISWLLMPISRLLVLLGN 149
Query: 92 YLL---GHRNEALFRRAELKTLVDLHGNEAGKGGELTHDETTIIAGALELSEKTASDAMT 148
L G RN EL+ +VDL A + G + DE +I EL + A + M
Sbjct: 150 ALTPGRGFRNGPFASEIELREVVDL----AQQRGVVAADERRMIESVFELGDTPAREVMV 205
Query: 149 PISETFAIDINSKLDRELMTEILEKGHSRVPVYYEQSTNIIGLILIKNLLTIHPEDESPV 208
P +E I+ + K + MT + GHSR+PV E +I+G++ +K+L+ +
Sbjct: 206 PRTEMIWIE-SDKTAGQAMTLAVRSGHSRIPVIGENVDDIVGVVYLKDLVEQTFCSTNGG 264
Query: 209 KSVTIRRIPR----VPESMPLYDILNEFQKGHSHMAVVV 243
+ T+ R+ R VP+S PL +L E Q+ +HMA++V
Sbjct: 265 RETTVARVMRPAVFVPDSKPLDALLREMQRDRNHMALLV 303
>YN66_MYCTU (P67130) Hypothetical UPF0053 protein Rv2366c/MT2435
Length = 435
Score = 80.5 bits (197), Expect = 6e-15
Identities = 60/219 (27%), Positives = 109/219 (49%), Gaps = 15/219 (6%)
Query: 35 WGAILISVTLILLFGEII---PQSVCSRYGLAIGASVTPFVRVLVWICYPVAFPISKLLD 91
WG L + ++L ++ P+++ + +I + +R++ W+ P++ + L +
Sbjct: 90 WGLYLAAGIMVLASFVVVGVGPRTLGRQNAYSISLATALPLRLISWLLMPISRLLVLLGN 149
Query: 92 YLL---GHRNEALFRRAELKTLVDLHGNEAGKGGELTHDETTIIAGALELSEKTASDAMT 148
L G RN EL+ +VDL A + G + DE +I EL + A + M
Sbjct: 150 ALTPGRGFRNGPFASEIELREVVDL----AQQRGVVAADERRMIESVFELGDTPAREVMV 205
Query: 149 PISETFAIDINSKLDRELMTEILEKGHSRVPVYYEQSTNIIGLILIKNLLTIHPEDESPV 208
P +E I+ + K + MT + GHSR+PV E +I+G++ +K+L+ +
Sbjct: 206 PRTEMIWIE-SDKTAGQAMTLAVRSGHSRIPVIGENVDDIVGVVYLKDLVEQTFCSTNGG 264
Query: 209 KSVTIRRIPR----VPESMPLYDILNEFQKGHSHMAVVV 243
+ T+ R+ R VP+S PL +L E Q+ +HMA++V
Sbjct: 265 RETTVARVMRPAVFVPDSKPLDALLREMQRDRNHMALLV 303
>YHDP_BACSU (O07585) Hypothetical UPF0053 protein yhdP
Length = 444
Score = 71.6 bits (174), Expect = 3e-12
Identities = 65/233 (27%), Positives = 108/233 (45%), Gaps = 23/233 (9%)
Query: 24 LPIFLDSLVTAWGAILISVTLILLFGEIIPQSVCSRYGLAIGASVTPFVRVLVWICYPVA 83
+P L +++ A I L ++ GE+ P++V + A+ F + L+W Y +A
Sbjct: 94 VPGSLSHVISFIFAYAIITFLHVVVGELAPKTVAIQKAEAVSML---FAKPLIWF-YRIA 149
Query: 84 FPI-------SKLLDYLLG----HRNEALFRRAELKTLVDLHGNEAGKGGELTHDETTII 132
FP ++LL G NE EL+ ++ +E+ K GE+ E +
Sbjct: 150 FPFIWLLNNSARLLTKAFGLETVSENELAHSEEELRIIL----SESYKSGEINQSEFKYV 205
Query: 133 AGALELSEKTASDAMTPISETFAIDINSKLDRELMTEILEKGHSRVPVYYEQSTNIIGLI 192
E ++ A + M P +E ++ + K+ E+M I + ++R PV NIIG+I
Sbjct: 206 NKIFEFDDRLAKEIMIPRTEIVSLPHDIKIS-EMMDIIQIEKYTRYPVEEGDKDNIIGVI 264
Query: 193 LIKNLLTIHPEDESPVKSVT---IRRIPRVPESMPLYDILNEFQKGHSHMAVV 242
IK +LT E V S + I V ES P+ D+L + QK HMA++
Sbjct: 265 NIKEVLTACISGEVSVDSTISQFVNPIIHVIESAPIQDLLVKMQKERVHMAIL 317
>YC54_SYNY3 (P74078) Hypothetical UPF0053 protein sll1254
Length = 346
Score = 71.2 bits (173), Expect = 4e-12
Identities = 60/217 (27%), Positives = 101/217 (45%), Gaps = 10/217 (4%)
Query: 31 LVTAWGAIL--ISVTLILLFGEIIPQSVCSRYGLAIGASVTPFVRVLVWICYPVAFPISK 88
L AW + I LI++FGEIIP+++ RY I + VR L I P+ + I +
Sbjct: 84 LQDAWMGVFSGILTLLIIVFGEIIPKTLGERYATNIALLIAIPVRFLTLIFTPLVWLIEQ 143
Query: 89 LLDYLLGHRNEALFRRAELKTLVDLHGNEAGKGGELTHDETTIIAGALELSEKTASDAMT 148
+ + + AE+K L L K G + DE +I +L++ A D MT
Sbjct: 144 ITNPFTHGKRVPSTNEAEIKFLATL----GYKEGVIEGDEEQMIQRVFQLNDLMAVDLMT 199
Query: 149 P-ISETFAIDINSKLDRELMTEILEKGHSRVPVYYEQSTNIIGLILIKNLLTIHPEDESP 207
P + T+ + E +I++ H+R+ + E ++G+ L ++LLT + E
Sbjct: 200 PRVIITYL--LGELTLAECQQDIIQSQHTRILIVDEYIDEVLGIALKQDLLTALIQGEGY 257
Query: 208 VKSVTIRRIPR-VPESMPLYDILNEFQKGHSHMAVVV 243
+ R + VPE M +L +FQ+ H+ VV+
Sbjct: 258 KTIAELARPAQFVPEGMRADKLLKQFQEKREHLMVVI 294
Score = 30.4 bits (67), Expect = 7.3
Identities = 16/34 (47%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 327 IPEEEEAVGIITMEDVIEELLQEEIFDETDHHFE 360
I E G+IT+EDV+ E+L EI DETD + +
Sbjct: 294 IDEYGGVAGVITLEDVV-EVLTGEIVDETDKNID 326
>YQHB_BACSU (P54505) Hypothetical UPF0053 protein yqhB
Length = 442
Score = 68.9 bits (167), Expect = 2e-11
Identities = 58/254 (22%), Positives = 115/254 (44%), Gaps = 26/254 (10%)
Query: 37 AILISVTLILLFGEIIPQSVCSRYGLAIGASVTP-FVRVLVWICYPVAFPISKLLDYLL- 94
A L+ L ++ GE+ P+S + + S+T F + L+W Y + FP LL++
Sbjct: 116 AFLVVTYLNVVIGELAPKS----FAIQKAESITLLFAKPLIWF-YKIMFPFIWLLNHSAR 170
Query: 95 ----------GHRNEALFRRAELKTLVDLHGNEAGKGGELTHDETTIIAGALELSEKTAS 144
+E + EL+ L+ E+ K GE+ E + ++ A
Sbjct: 171 LITGVFGLKPASEHELAYTEEELRVLLA----ESYKSGEIRKSELKYMNNIFTFDKRMAK 226
Query: 145 DAMTPISETFAIDINSKLDRELMTEILEKGHSRVPVYYEQSTNIIGLILIKNLLTIHPED 204
+ M P +E ++ ++ L + + ++R PV E N+IG+I +K +L
Sbjct: 227 EIMVPRNEMVSLSLDEDSISNLQETVKQTKYTRYPVVREDKDNVIGVINMKEVLFSMLTK 286
Query: 205 ESPVKSVTI----RRIPRVPESMPLYDILNEFQKGHSHMAVVVRQCDKTKQPSSKND-SN 259
+ +K I + + V E++P+Y +L + QK +HMA+++ + T + D
Sbjct: 287 DFSIKKHQIEPFVQPVIHVIETIPIYKLLLKMQKERTHMAILIDEYGGTSGLVTVEDIIE 346
Query: 260 DSVKEVKVDIDGEK 273
+ V E++ + D ++
Sbjct: 347 EIVGEIRDEFDADE 360
>YI41_MYCTU (Q50593) Hypothetical protein Rv1841c/MT1889
Length = 345
Score = 67.4 bits (163), Expect = 5e-11
Identities = 54/217 (24%), Positives = 104/217 (47%), Gaps = 16/217 (7%)
Query: 37 AILISVTLILLFGEIIPQSVCSRYGLAIGASVTPFVRVLVWICYP-VAF------PISKL 89
++ I V L +L GE++P+++ + P V V + P +AF I +L
Sbjct: 104 SLAIVVALHVLLGEMVPKNIALAGPERTAMLLVPPYLVYVRLARPFIAFYNNCANAILRL 163
Query: 90 LDYLLGHRNEALFRRAELKTLVDLHGNEAGKGGELTHDETTIIAGALELSEKTASDAMTP 149
+ + AEL ++ E+ G L H+E T + AL + + +D P
Sbjct: 164 VGVQPKDELDIAVSTAELSEMIA----ESLSEGLLDHEEHTRLTRALRIRTRLVADVAVP 219
Query: 150 ISETFAIDINSKLDRELM----TEILEKGHSRVPVYYEQSTNIIGLILIKNLLTIHPEDE 205
+ A+ +++ + + + G+SR PV ++ IG + IK++LT+ +
Sbjct: 220 LVNIRAVQVSAVGSGPTIGGVEQALAQTGYSRFPVV-DRGGRFIGYLHIKDVLTLGDNPQ 278
Query: 206 SPVKSVTIRRIPRVPESMPLYDILNEFQKGHSHMAVV 242
+ + +R +PRVP+S+PL D L+ ++ +SH+A+V
Sbjct: 279 TVIDLAVVRPLPRVPQSLPLADALSRMRRINSHLALV 315
>CORC_BUCAP (Q8K9C0) Magnesium and cobalt efflux protein corC
Length = 291
Score = 67.4 bits (163), Expect = 5e-11
Identities = 56/204 (27%), Positives = 99/204 (48%), Gaps = 15/204 (7%)
Query: 104 RAELKTLV-DLHGNEAGKGGELTHDETTIIAGALELSEKTASDAMTPISETFAIDINSKL 162
R EL L+ D NE + D ++ G + +++K D M P ++ + +N L
Sbjct: 33 REELLVLIRDSEQNEL-----IDQDTCDMLEGVMHIAKKRIKDIMIPRTQMITLKLNYNL 87
Query: 163 DRELMTEILEKGHSRVPVYYEQSTNIIGLILIKNLLTI--HPEDESPVKSVTIRRIPRVP 220
++ + I+E HSR PV + G ++ K+LL HPED +K++ +R VP
Sbjct: 88 NK-CLDIIIESAHSRFPVMSRDQNYVEGFLIAKDLLPFMKHPEDAFCIKNI-LRSAVVVP 145
Query: 221 ESMPLYDILNEFQKGHSHMAVVVRQCDKTKQPSSKNDSND-SVKEVKVDIDGEKPLQEKV 279
ES + +L EF+ SHMA+V+ + + D + V E++ + D E+ + +
Sbjct: 146 ESKSVDTMLKEFRLKRSHMAIVIDEFGAVSGLVTIEDILELIVGEIQDEYDDEEKVNIRK 205
Query: 280 LKPKI----PIQKWKSFPNTNKSN 299
LK I + + K F +T ++N
Sbjct: 206 LKKCIFSIKALTEIKEFNDTFETN 229
>YUGS_BACSU (O05241) Hypothetical UPF0053 protein yugS
Length = 434
Score = 65.5 bits (158), Expect = 2e-10
Identities = 54/231 (23%), Positives = 108/231 (46%), Gaps = 20/231 (8%)
Query: 24 LPIFLDSLVTAWGAILISVTLILLFGEIIPQSVCSRYGLAIGASVTPFVRVLVWICYPVA 83
+P + +VT A +I L ++ GE+ P++V + A+ + + L+W Y +
Sbjct: 99 IPEPFNHIVTFVVAFIIVTFLHVVMGELAPKTVSIQKAEAVSLWIA---KPLIWF-YKIT 154
Query: 84 FPISKLLD-------YLLGHRN----EALFRRAELKTLVDLHGNEAGKGGELTHDETTII 132
+P K L+ L G + + + EL+ ++ +E+ + GE+ E +
Sbjct: 155 YPFIKALNGSASFLVKLFGFHSVKEHQVVISEEELRLIL----SESYEKGEINQSEFRYV 210
Query: 133 AGALELSEKTASDAMTPISETFAIDINSKLDRELMTEILEKGHSRVPVYYEQSTNIIGLI 192
E + A + M P +E I + L+ E + I+ + ++R PV + +I+G+I
Sbjct: 211 NKIFEFDNRVAREIMIPRTEIAVISLEQSLE-EAIHHIINERYTRYPVIKDDKDHILGII 269
Query: 193 LIKNLLTIHPEDESPVKSVTIRRIPRVPESMPLYDILNEFQKGHSHMAVVV 243
K++ + + + +R + RV ES+P+ +L QK HMA++V
Sbjct: 270 NSKDMFKAYFLGQPIKLNQIMRPVIRVIESIPVQQLLIRMQKERIHMAILV 320
>CORC_ECOLI (P77392) Magnesium and cobalt efflux protein corC
Length = 292
Score = 65.1 bits (157), Expect = 3e-10
Identities = 42/141 (29%), Positives = 72/141 (50%), Gaps = 6/141 (4%)
Query: 104 RAELKTLVDLHGNEAGKGGELTHDETTIIAGALELSEKTASDAMTPISETFAIDINSKLD 163
R EL L+ ++G+ + D ++ G ++++++ D M P S+ + N LD
Sbjct: 34 RDELLALI----RDSGQNDLIDEDTRDMLEGVMDIADQRVRDIMIPRSQMITLKRNQTLD 89
Query: 164 RELMTEILEKGHSRVPVYYEQSTNIIGLILIKNLLTIHPED-ESPVKSVTIRRIPRVPES 222
E + I+E HSR PV E +I G+++ K+LL D E+ +R+ VPES
Sbjct: 90 -ECLDVIIESAHSRFPVISEDKDHIEGILMAKDLLPFMRSDAEAFSMDKVLRQAVVVPES 148
Query: 223 MPLYDILNEFQKGHSHMAVVV 243
+ +L EF+ HMA+V+
Sbjct: 149 KRVDRMLKEFRSQRYHMAIVI 169
>CORC_VIBCH (Q9KTE3) Magnesium and cobalt efflux protein corC
Length = 291
Score = 64.3 bits (155), Expect = 5e-10
Identities = 47/150 (31%), Positives = 74/150 (49%), Gaps = 5/150 (3%)
Query: 124 LTHDETTIIAGALELSEKTASDAMTPISETFAIDINSKLDRELMTEILEKGHSRVPVYYE 183
+ HD ++ G +E++E D M P S+ ID LD L+ + + HSR PV E
Sbjct: 48 IDHDTRDMLEGVMEIAEMRVRDIMIPRSQMVTIDRTHNLD-ALVAIMTDAQHSRYPVISE 106
Query: 184 QSTNIIGLILIKNLLTIHPEDESPVK-SVTIRRIPRVPESMPLYDILNEFQKGHSHMAVV 242
++ G++L K+LL + +P IR VPES + +L EF++ HMA+V
Sbjct: 107 DKDHVEGILLAKDLLKYLGSNCAPFNIQEVIRPAVVVPESKRVDRLLKEFREERYHMAIV 166
Query: 243 VRQCDKTKQPSSKNDSNDSVKEVKVDIDGE 272
V D+ S D ++E+ DI+ E
Sbjct: 167 V---DEFGGVSGLVTIEDILEEIVGDIEDE 193
>CORC_SALTY (Q9R874) Magnesium and cobalt efflux protein corC
Length = 292
Score = 63.9 bits (154), Expect = 6e-10
Identities = 42/141 (29%), Positives = 71/141 (49%), Gaps = 6/141 (4%)
Query: 104 RAELKTLVDLHGNEAGKGGELTHDETTIIAGALELSEKTASDAMTPISETFAIDINSKLD 163
R EL L+ ++G+ + D ++ G ++++++ D M P S+ + N LD
Sbjct: 34 RDELLALI----RDSGQNELIDEDTRDMLEGVMDIADQRVRDIMIPRSQMITLKRNQTLD 89
Query: 164 RELMTEILEKGHSRVPVYYEQSTNIIGLILIKNLLTIHPED-ESPVKSVTIRRIPRVPES 222
E + I+E HSR PV E +I G+++ K+LL D E+ +R VPES
Sbjct: 90 -ECLDVIIESAHSRFPVISEDKDHIEGILMAKDLLPFMRSDAEAFSMDKVLRTAVVVPES 148
Query: 223 MPLYDILNEFQKGHSHMAVVV 243
+ +L EF+ HMA+V+
Sbjct: 149 KRVDRMLKEFRSQRYHMAIVI 169
>YRKA_BACSU (P54428) Hypothetical UPF0053 protein yrkA
Length = 434
Score = 63.5 bits (153), Expect = 8e-10
Identities = 60/251 (23%), Positives = 116/251 (45%), Gaps = 20/251 (7%)
Query: 37 AILISVTLILLFGEIIPQSVCSRYG----LAIGASVTPFVRVL---VWICYPVAFPISKL 89
A +++ L ++ GE+ P+++ + L + F R+L +W A I L
Sbjct: 107 AFVMATFLHVVVGELAPKTLAIQKAETITLLTAKPIIWFYRILFPFIWFLNGSARFIVGL 166
Query: 90 LDYLLGHRNEALFRRAELKTLVDLHGNEAGKGGELTHDETTIIAGALELSEKTASDAMTP 149
+E EL+ L+ +E+ K GE+ +E + E E+ A + M P
Sbjct: 167 FGLKPASEHELAHSEEELRILL----SESYKSGEINQNELKYVNNIFEFDERIAKEIMIP 222
Query: 150 ISETFAIDINSKLDRELMTEILE-KGHSRVPVYYEQSTNIIGLILIKNLLTIHPEDESPV 208
E AI +S+ E + +I++ + ++R PV +IIG I K L+ + + + +
Sbjct: 223 RREIVAI--SSEDSYETIVKIIKTESYTRYPVLNGDKDSIIGFINAKEFLSAYIDTDQKI 280
Query: 209 KSVT-----IRRIPRVPESMPLYDILNEFQKGHSHMAVVVRQCDKTKQPSSKND-SNDSV 262
K I + V ES+P++D+L + QK +H+A++V + T + D + V
Sbjct: 281 KEDFKLENHINPVIHVIESVPIHDVLVKMQKERTHIAILVDEYGGTSGLVTAEDILEEIV 340
Query: 263 KEVKVDIDGEK 273
E++ + D ++
Sbjct: 341 GEIRDEFDKDE 351
>Y740_RICPR (O05961) Hypothetical UPF0053 protein RP740
Length = 303
Score = 61.2 bits (147), Expect = 4e-09
Identities = 44/155 (28%), Positives = 77/155 (49%), Gaps = 5/155 (3%)
Query: 123 ELTHDETTIIAGALELSEKTASDAMTPISETFAIDINSKLDRELMTEILEKGHSRVPVYY 182
+++ DE I+A L+L +K D M P S+ AI + + L+ + + H+R +Y
Sbjct: 57 KMSLDEFNILANLLKLEDKIVEDIMVPRSDIIAIKLTTNLEELSESIKIAVPHTRTLIYD 116
Query: 183 EQSTNIIGLILIKNLL-TIHPEDESPVKSVTIRRIPRVPESMPLYDILNEFQKGHSHMAV 241
N++G I IK+L + + SP+K + + I P SM L D+L + ++ +H+A+
Sbjct: 117 GTLDNVVGFIHIKDLFKALATKQNSPLKRLIRKHIIAAP-SMKLLDLLAKMRRERTHIAI 175
Query: 242 VVRQCDKTKQPSSKNDSNDSVKEVKVDIDGEKPLQ 276
VV D+ D ++E+ ID E Q
Sbjct: 176 VV---DEYGGTDGLVTIEDLIEEIVGRIDDEHDQQ 207
>YFJD_ECOLI (P37908) Hypothetical UPF0053 protein yfjD
Length = 420
Score = 60.5 bits (145), Expect = 7e-09
Identities = 45/212 (21%), Positives = 101/212 (47%), Gaps = 17/212 (8%)
Query: 44 LILLFGEIIPQSVCSRYGLAIGASVTPFVRVLVWICYPVAF---PISKLLDYLLGHRNEA 100
++L+F E++P+++ + Y + + + L + P+ + I+++L ++G + +
Sbjct: 96 VVLVFAEVLPKTIAALYPEKVAYPSSFLLAPLQILMMPLVWLLNAITRMLMRMMGIKTDI 155
Query: 101 L----FRRAELKTLVDLHGNEAGKGGELTHDETTIIAGALELSEKTASDAMTPISETFAI 156
+ + EL+T+V H + + +++ ++ L+L + T D M P SE I
Sbjct: 156 VVSGSLSKEELRTIV--HESRS----QISRRNQDMLLSVLDLEKMTVDDIMVPRSEIIGI 209
Query: 157 DINSKLDRELMTEILEKGHSRVPVYYEQSTNIIGLILIKNLLTIHPEDESPVKSVTIR-- 214
DIN + ++ ++ H R+ +Y + + I ++ ++ + E + K +R
Sbjct: 210 DINDDW-KSILRQLSHSPHGRIVLYRDSLDDAISMLRVREAWRLMSEKKEFTKETMLRAA 268
Query: 215 -RIPRVPESMPLYDILNEFQKGHSHMAVVVRQ 245
I VPE PL L +FQ+ + +VV +
Sbjct: 269 DEIYFVPEGTPLSTQLVKFQRNKKKVGLVVNE 300
>YHDT_BACSU (O07589) Hypothetical UPF0053 protein yhdT
Length = 461
Score = 57.0 bits (136), Expect = 7e-08
Identities = 57/264 (21%), Positives = 121/264 (45%), Gaps = 22/264 (8%)
Query: 30 SLVTAWGAILISVTLILLFGEIIPQSVCSRYGLAIGASVTPFVRVLVWICYPVAFPISKL 89
S A+G I L ++ GE+ P++V + + + +R+ + +P + ++
Sbjct: 104 SFAVAYGLITF---LHVVVGELAPKTVAIQKAEQLTLLIAGPLRLFYLLLFPFIWILNGS 160
Query: 90 LDYLLG-------HRNEALFRRAELKTLVDLHGNEAGKGGELTHDETTIIAGALELSEKT 142
L G ++ EL+ L+ +E+ K GE+ E + E +
Sbjct: 161 ARLLCGMFGLKPASEHDGSHSEEELRMLL----SESLKNGEINPSEYKYVNKIFEFDNRI 216
Query: 143 ASDAMTPISETFAIDINSKLDRELMTEILEKGHSRVPVYYEQSTNIIGLILIKNLLT--I 200
A + M P E A+ + E++ +L++ ++R PV +++GL+ K+L + +
Sbjct: 217 AKEIMIPRKEMAAVSTEMTM-AEMLEVMLKEKYTRWPVTDGDKDSVLGLVNTKHLFSDLL 275
Query: 201 HPEDESPVKSVT---IRRIPRVPESMPLYDILNEFQKGHSHMAVVVRQCDKTKQPSSKND 257
+E +K +R + V E++P++D+L + Q+ HMA++ + T + D
Sbjct: 276 FMTEEERMKMTIHPYVRPVIEVIETIPVHDLLIKMQRERIHMAILSDEYGGTSGLVTTED 335
Query: 258 -SNDSVKEVKVDID-GEKPLQEKV 279
+ V E++ + D E+PL +K+
Sbjct: 336 ILEEIVGEIRDEFDEDEQPLIQKL 359
>CORC_HAEIN (Q57368) Magnesium and cobalt efflux protein corC
Length = 299
Score = 57.0 bits (136), Expect = 7e-08
Identities = 46/145 (31%), Positives = 72/145 (48%), Gaps = 7/145 (4%)
Query: 131 IIAGALELSEKTASDAMTPISETFAIDINSKLDRELMTEILEKGHSRVPVYYEQST--NI 188
+I G +E++E D M P S+ I+ L+ L T I+E HSR PV + NI
Sbjct: 57 MIEGVMEIAELRVRDIMIPRSQIIFIEDQQDLNTCLNT-IIESAHSRFPVIADADDRDNI 115
Query: 189 IGLILIKNLLTIHPEDESPVK-SVTIRRIPRVPESMPLYDILNEFQKGHSHMAVVVRQCD 247
+G++ K+LL ED S +R + VPES + +L +F+ HMA+VV D
Sbjct: 116 VGILHAKDLLKFLREDAEVFDLSSLLRPVVIVPESKRVDRMLKDFRSERFHMAIVV---D 172
Query: 248 KTKQPSSKNDSNDSVKEVKVDIDGE 272
+ S D ++++ DI+ E
Sbjct: 173 EFGAVSGLVTIEDILEQIVGDIEDE 197
>YTFL_ECOLI (P39319) Hypothetical UPF0053 protein ytfL
Length = 447
Score = 55.5 bits (132), Expect = 2e-07
Identities = 48/206 (23%), Positives = 94/206 (45%), Gaps = 6/206 (2%)
Query: 44 LILLFGEIIPQSVCSRYGLAIGASVTPFVRVLVWICYPVAFPISKLLDYLLGHRNEALFR 103
+ +LF ++ P+ + A+ + +R +++C P+ + + L + + + R
Sbjct: 112 MFILFADLTPKRIGMIAPEAVALRIINPMRFCLYVCTPLVWFFNGLANIIFRIFKLPMVR 171
Query: 104 RAELKTLVDLHGN-EAGK-GGELTHDETTIIAGALELSEKTASDAMTPISETFAIDINSK 161
+ ++ T D++ EAG G L E +I EL +T +MTP D++
Sbjct: 172 KDDI-TSDDIYAVVEAGALAGVLRKQEHELIENVFELESRTVPSSMTPRENVIWFDLHED 230
Query: 162 LDRELMTEILEKGHSRVPVYYEQSTNIIGLILIKNLLTIHPEDESPV--KSVTIRRIPRV 219
++ L ++ E HS+ V E +IIG + K+LL ++S V IR V
Sbjct: 231 -EQSLKNKVAEHPHSKFLVCNEDIDHIIGYVDSKDLLNRVLANQSLALNSGVQIRNTLIV 289
Query: 220 PESMPLYDILNEFQKGHSHMAVVVRQ 245
P+++ L + L F+ AV++ +
Sbjct: 290 PDTLTLSEALESFKTAGEDFAVIMNE 315
>Y452_HAEIN (P44717) Hypothetical UPF0053 protein HI0452
Length = 432
Score = 55.5 bits (132), Expect = 2e-07
Identities = 60/264 (22%), Positives = 113/264 (42%), Gaps = 29/264 (10%)
Query: 37 AILISVTLILLFGEIIPQSVCSRYGLAIGASVTPFVRVLVWICYPVAFPISKLLDYLLGH 96
A ++ L +LF ++IP+ + Y + SV + +++ P+ + + +
Sbjct: 109 AFILVTCLFILFADLIPKRIAITYPEMVALSVVGIMNFSMYVFKPLVWFFDTIANVFF-- 166
Query: 97 RNEALFR----RAELKTLVDLHG-NEAG-KGGELTHDETTIIAGALELSEKTASDAMTPI 150
LFR R + T D+ EAG + G L E +I ++ +T + MT
Sbjct: 167 ---RLFRISTVREDGMTSEDIFAVVEAGAEAGVLKTQEHYLIENIFDMQARTVTSTMTTR 223
Query: 151 SETFAIDINSKLDRELMTEILEKGHSRVPVYYEQSTNIIGLILIKNLLTIHPEDESPVKS 210
+D + +E+M + HS++ + I+G I LLT++ ++E+ V +
Sbjct: 224 ENIVYLD-RTFSRQEVMDTLSRDSHSKIVICDNGLDKILGYIESHTLLTMYLQNENVVLT 282
Query: 211 --VTIRRIPRVPESMPLYDILNEFQKGHSHMAVVVRQCDKTKQPSSKND----------S 258
+R+ VP+++ LY++L F+ A++V + + ND S
Sbjct: 283 DPKLLRKALFVPDTLSLYEVLELFKSTGEDFAIIVNEYALVVGIVTLNDVMSIVMGELVS 342
Query: 259 NDSVKEVKVD-----IDGEKPLQE 277
N+ V D IDG PL+E
Sbjct: 343 NEEEYIVSRDENSWLIDGATPLEE 366
>CORC_PASMU (Q9CM13) Magnesium and cobalt efflux protein corC
Length = 300
Score = 54.7 bits (130), Expect = 4e-07
Identities = 46/150 (30%), Positives = 72/150 (47%), Gaps = 5/150 (3%)
Query: 131 IIAGALELSEKTASDAMTPISETFAIDINSKLDRELMTEILEKGHSRVPVYYEQSTNIIG 190
+I G +E++E D M P S+ I + LD L T I+ HSR PV ++ NI G
Sbjct: 59 MIEGVMEIAELRVRDIMIPRSQIVFIHTDQNLDSCLDT-IIVSAHSRFPVITDERDNIAG 117
Query: 191 LILIKNLLT-IHPEDESPVKSVTIRRIPRVPESMPLYDILNEFQKGHSHMAVVVRQCDKT 249
++ K+LL + E +R VPES + +L +F+ HMA+VV D+
Sbjct: 118 ILHAKDLLRFLRSNAEEFDLMPLLRPAVIVPESKRVDRMLKDFRSERFHMAIVV---DEF 174
Query: 250 KQPSSKNDSNDSVKEVKVDIDGEKPLQEKV 279
S D ++++ DI+ E +E V
Sbjct: 175 GAVSGLVTIEDILEQIVGDIEDEFDEEEIV 204
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.318 0.138 0.403
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,809,091
Number of Sequences: 164201
Number of extensions: 1913433
Number of successful extensions: 5316
Number of sequences better than 10.0: 64
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 50
Number of HSP's that attempted gapping in prelim test: 5239
Number of HSP's gapped (non-prelim): 96
length of query: 362
length of database: 59,974,054
effective HSP length: 111
effective length of query: 251
effective length of database: 41,747,743
effective search space: 10478683493
effective search space used: 10478683493
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 66 (30.0 bits)
Medicago: description of AC124214.17