BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC123596.12 - phase: 0
(408 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
RL4_PRUAR (Q9XF97) 60S ribosomal protein L4 (L1) 694 0.0
RL4B_ARATH (Q9SF40) 60S ribosomal protein L4-2 (L1) 684 0.0
RL4A_ARATH (P49691) 60S ribosomal protein L4-1 (L1) 676 0.0
RL4A_XENLA (P08429) 60S ribosomal protein L4A (L1A) 455 e-127
RL4B_XENLA (P02385) 60S ribosomal protein L4B (L1B) (Fragment) 450 e-126
RL4_URECA (P49165) 60S ribosomal protein L4 (L1) 449 e-126
RL4_MOUSE (Q9D8E6) 60S ribosomal protein L4 (L1) 446 e-125
RL4_HUMAN (P36578) 60S ribosomal protein L4 (L1) 444 e-124
RL4_RAT (P50878) 60S ribosomal protein L4 (L1) 440 e-123
RL4A_SCHPO (P35679) 60S ribosomal protein L4-A (L2) 433 e-121
RL4B_SCHPO (Q9P784) 60s ribosomal protein L4-B 430 e-120
RL4_CANFA (Q28346) 60S ribosomal protein L4 (L1) (Fragment) 425 e-119
RL4_DROME (P09180) 60S ribosomal protein L4 (L1) 405 e-113
RL4B_YEAST (P49626) 60S ribosomal protein L4-B (L2B) (RP2) 402 e-112
RL4A_YEAST (P10664) 60S ribosomal protein L4-A (L2A) (RP2) 402 e-112
RL4_TRYBB (P49669) 60S ribosomal protein L4 (L1) 379 e-105
RL4_CAEEL (O02056) 60S ribosomal protein L4 370 e-102
RL4_ENTHI (O15594) 60S ribosomal protein L4 (L1) (Fragments) 234 2e-61
RL4_METTH (O26111) 50S ribosomal protein L4P 185 2e-46
RL4_PYRAE (Q8ZW51) 50S ribosomal protein L4P 174 3e-43
>RL4_PRUAR (Q9XF97) 60S ribosomal protein L4 (L1)
Length = 408
Score = 694 bits (1792), Expect = 0.0
Identities = 341/408 (83%), Positives = 377/408 (91%)
Query: 1 MAAAAAAARPLVTIQTLESEMSTDSPNTLPIPDVMRASIRPDIVNFVHSNISKNSRQPYA 60
MAAAAAAARPLVT+Q+LE +M+TD T+ +PDVM+ASIRPDIV FVHSNISKNSRQPYA
Sbjct: 1 MAAAAAAARPLVTVQSLEGDMATDQTQTVALPDVMKASIRPDIVTFVHSNISKNSRQPYA 60
Query: 61 VSRKAGHQTSAESWGTGRAVSRIPRVAGGGTHRAGQAAFGNMCRGGRMFAPTRIWRKWHR 120
VS+KAGHQTSAESWGTGRAVSRIPRV GGGTHRAGQ AFGNMCRGGRMFAPT+IWR+WHR
Sbjct: 61 VSKKAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHR 120
Query: 121 KINVNQKRYAVVSAIAASAIPSLVLARGHRIETVPEFPLVVGDAAEGVEKTKEAIKVLKQ 180
KINVNQKRYAVVSAIAASA+PSLVLARGH+IETVPE PLVV D+ EGVE+T A+KVLKQ
Sbjct: 121 KINVNQKRYAVVSAIAASAVPSLVLARGHKIETVPELPLVVSDSIEGVEETSAALKVLKQ 180
Query: 181 VGAFADAEKAKDSLGIRPGKGKMRNRRYISRKGPLIVYGTDGAKAVKAFRNIPGVEITNV 240
+GA++DAEKAKDS IRPGKGKMRNRRYI+RKGPLIVYGT+GAK VKAFRNIPG++I NV
Sbjct: 181 IGAYSDAEKAKDSHSIRPGKGKMRNRRYINRKGPLIVYGTEGAKLVKAFRNIPGIDIINV 240
Query: 241 ERLNLLKLAPGGHLGRFVIWTKSAFEKLDSIYGTFDKGSEKKKGYVLPRAKMVNSDLTRI 300
ERLNLLKLAPGGHLGRFV+WTKSAFEKLDSIYG+FDK SEKK GYVLPR+KMVN+DL RI
Sbjct: 241 ERLNLLKLAPGGHLGRFVVWTKSAFEKLDSIYGSFDKVSEKKNGYVLPRSKMVNADLARI 300
Query: 301 INSDEVQSVVRPIKKDVKRATLKKNPLKNLNVMLRLNPYAKTAKRMALLAEAERVKSKKE 360
INSDEVQSVV PI++ KRA LKKNPL+ LN ML+LNPYAKTA+RM+LLAEAERVK+KKE
Sbjct: 301 INSDEVQSVVSPIQEGSKRAPLKKNPLRILNTMLKLNPYAKTARRMSLLAEAERVKAKKE 360
Query: 361 KFDKKRKIVSKEEASAIKAAGKAWYNTMVSDSDYAEFDNFSKWLGVSQ 408
K DKKRK +SKEEAS IKAAGKAWY TM+SDSDY EFDNF+KWLGVSQ
Sbjct: 361 KLDKKRKPISKEEASTIKAAGKAWYQTMISDSDYTEFDNFTKWLGVSQ 408
>RL4B_ARATH (Q9SF40) 60S ribosomal protein L4-2 (L1)
Length = 406
Score = 684 bits (1764), Expect = 0.0
Identities = 331/405 (81%), Positives = 374/405 (91%)
Query: 4 AAAAARPLVTIQTLESEMSTDSPNTLPIPDVMRASIRPDIVNFVHSNISKNSRQPYAVSR 63
AAAAARPLVTIQTL+ +MSTD +T+ +PDVM A +RPDIVNFVH+ IS NSRQPYAVS+
Sbjct: 2 AAAAARPLVTIQTLDGDMSTDQSSTVVLPDVMTAPVRPDIVNFVHAQISNNSRQPYAVSK 61
Query: 64 KAGHQTSAESWGTGRAVSRIPRVAGGGTHRAGQAAFGNMCRGGRMFAPTRIWRKWHRKIN 123
KAGHQTSAESWGTGRAVSRIPRV GGGTHRAGQAAFGNMCRGGRMFAPT+IWR+WHR++N
Sbjct: 62 KAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHRRVN 121
Query: 124 VNQKRYAVVSAIAASAIPSLVLARGHRIETVPEFPLVVGDAAEGVEKTKEAIKVLKQVGA 183
VN KR+A+VSAIAA+A+P+LV+ARGH+IE VPE PLVV D+AE VEKT AIKVLKQ+GA
Sbjct: 122 VNMKRHAIVSAIAATAVPALVMARGHKIENVPEMPLVVSDSAEAVEKTSAAIKVLKQIGA 181
Query: 184 FADAEKAKDSLGIRPGKGKMRNRRYISRKGPLIVYGTDGAKAVKAFRNIPGVEITNVERL 243
+ DAEKAK+S+GIRPGKGKMRNRRYISRKGPL+VYGT+G+K VKAFRN+PGVE+ +VERL
Sbjct: 182 YDDAEKAKNSIGIRPGKGKMRNRRYISRKGPLVVYGTEGSKIVKAFRNLPGVELCHVERL 241
Query: 244 NLLKLAPGGHLGRFVIWTKSAFEKLDSIYGTFDKGSEKKKGYVLPRAKMVNSDLTRIINS 303
NLLKLAPGGHLGRFVIWTKSAFEKL+SIYG+F+K SEKKKGYVLPRAKMVN+DL RIINS
Sbjct: 242 NLLKLAPGGHLGRFVIWTKSAFEKLESIYGSFEKPSEKKKGYVLPRAKMVNADLARIINS 301
Query: 304 DEVQSVVRPIKKDVKRATLKKNPLKNLNVMLRLNPYAKTAKRMALLAEAERVKSKKEKFD 363
DE+QSVV PIKKD KRA LKKNPLKNLNVML+LNPYAKTAKRM+LLAEA+RVK+KKEK
Sbjct: 302 DEIQSVVNPIKKDAKRAVLKKNPLKNLNVMLKLNPYAKTAKRMSLLAEAQRVKAKKEKLA 361
Query: 364 KKRKIVSKEEASAIKAAGKAWYNTMVSDSDYAEFDNFSKWLGVSQ 408
KKRK V+KEEA AIKAAGK+WY TM+SDSDY EFDNF+KWLG SQ
Sbjct: 362 KKRKTVTKEEALAIKAAGKSWYKTMISDSDYTEFDNFTKWLGASQ 406
>RL4A_ARATH (P49691) 60S ribosomal protein L4-1 (L1)
Length = 407
Score = 676 bits (1745), Expect = 0.0
Identities = 327/405 (80%), Positives = 370/405 (90%)
Query: 4 AAAAARPLVTIQTLESEMSTDSPNTLPIPDVMRASIRPDIVNFVHSNISKNSRQPYAVSR 63
A+AAARPLVT+Q L+ +MSTD T+ +PDVM A +RPDIVNFVH+ IS NSRQPYAVS+
Sbjct: 3 ASAAARPLVTVQGLDGDMSTDQSTTVTLPDVMTAPVRPDIVNFVHAQISNNSRQPYAVSK 62
Query: 64 KAGHQTSAESWGTGRAVSRIPRVAGGGTHRAGQAAFGNMCRGGRMFAPTRIWRKWHRKIN 123
KAGHQTSAESWGTGRAVSRIPRV GGGTHRAGQAAFGNMCRGGRMFAPT+IWR+WHR++N
Sbjct: 63 KAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHRRVN 122
Query: 124 VNQKRYAVVSAIAASAIPSLVLARGHRIETVPEFPLVVGDAAEGVEKTKEAIKVLKQVGA 183
VN KR+A+VSAIAA+A+P+LV+ARGH+IE VPE PLVV D+AE VEKT AIKVLKQ+GA
Sbjct: 123 VNMKRHAIVSAIAATAVPALVMARGHKIENVPEMPLVVSDSAEAVEKTSAAIKVLKQIGA 182
Query: 184 FADAEKAKDSLGIRPGKGKMRNRRYISRKGPLIVYGTDGAKAVKAFRNIPGVEITNVERL 243
+ DAEKAK+S+GIRPGKGKMRNRRYISRKGPL+V+GT+GAK VKAFRN+PGVE+ +VERL
Sbjct: 183 YDDAEKAKNSIGIRPGKGKMRNRRYISRKGPLVVFGTEGAKIVKAFRNLPGVELCHVERL 242
Query: 244 NLLKLAPGGHLGRFVIWTKSAFEKLDSIYGTFDKGSEKKKGYVLPRAKMVNSDLTRIINS 303
NLLKLAPGGHLGRFVIWTKSAFEKL+SIYG+F+K SEKKKGYVLPRAKMVN+DL RIINS
Sbjct: 243 NLLKLAPGGHLGRFVIWTKSAFEKLESIYGSFEKPSEKKKGYVLPRAKMVNADLARIINS 302
Query: 304 DEVQSVVRPIKKDVKRATLKKNPLKNLNVMLRLNPYAKTAKRMALLAEAERVKSKKEKFD 363
DEVQSVV PIK KRA LKKNPLKNLNVM +LNPYAKTAKRM+LLAEA RVK+KKEK +
Sbjct: 303 DEVQSVVNPIKDGSKRAVLKKNPLKNLNVMFKLNPYAKTAKRMSLLAEASRVKAKKEKLE 362
Query: 364 KKRKIVSKEEASAIKAAGKAWYNTMVSDSDYAEFDNFSKWLGVSQ 408
KKRK+V+KEEA AIKAAGKAWY TM+SDSDY EFDNF+KWLG SQ
Sbjct: 363 KKRKVVTKEEAQAIKAAGKAWYQTMISDSDYTEFDNFTKWLGASQ 407
>RL4A_XENLA (P08429) 60S ribosomal protein L4A (L1A)
Length = 396
Score = 455 bits (1170), Expect = e-127
Identities = 221/363 (60%), Positives = 280/363 (76%), Gaps = 4/363 (1%)
Query: 1 MAAAAAAARPLVTIQTLESEMSTDSPNTLPIPDVMRASIRPDIVNFVHSNISKNSRQPYA 60
MA + A ARPL+++ SE S + +P V RA IRPDIVNFVH+N+ KN+RQPYA
Sbjct: 1 MAVSMACARPLISVY---SEKGESSGKNVTMPAVFRAPIRPDIVNFVHTNLRKNNRQPYA 57
Query: 61 VSRKAGHQTSAESWGTGRAVSRIPRVAGGGTHRAGQAAFGNMCRGGRMFAPTRIWRKWHR 120
VS+ AGHQTSAESWGTGRAV+RIPRV GGGTHR+GQ AFGNMCRGGRMFAPT+ WR+WHR
Sbjct: 58 VSKLAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHR 117
Query: 121 KINVNQKRYAVVSAIAASAIPSLVLARGHRIETVPEFPLVVGDAAEGVEKTKEAIKVLKQ 180
++N QKRYAV SA+AASA+P+L++++GHRIE +PE PLVV D E +KTKEA+ +LK+
Sbjct: 118 RVNTTQKRYAVCSALAASALPALIMSKGHRIEEIPEVPLVVEDKVESYKKTKEAVLLLKK 177
Query: 181 VGAFADAEKAKDSLGIRPGKGKMRNRRYISRKGPLIVYGTDGAKAVKAFRNIPGVEITNV 240
+ A+ D +K S +R GKGKMRNRR I R+GP ++Y + VKAFRNIPG+ + NV
Sbjct: 178 LKAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCVIYNENNG-LVKAFRNIPGITLLNV 236
Query: 241 ERLNLLKLAPGGHLGRFVIWTKSAFEKLDSIYGTFDKGSEKKKGYVLPRAKMVNSDLTRI 300
+LNLL+LAPGGH+GRF IWT+SAF KLD +YGT+ K ++ K Y LP KM N+DLTRI
Sbjct: 237 SKLNLLRLAPGGHVGRFCIWTESAFRKLDDLYGTWRKSAKLKADYNLPMHKMTNTDLTRI 296
Query: 301 INSDEVQSVVRPIKKDVKRATLKKNPLKNLNVMLRLNPYAKTAKRMALLAEAERVKSKKE 360
+ S E+Q +R K VKR LKKNPLKNL +M+RLNPYAKTA+R A+L + E +K+K++
Sbjct: 297 LKSQEIQRALRAPNKKVKRRELKKNPLKNLRIMMRLNPYAKTARRHAILQQLENIKAKEK 356
Query: 361 KFD 363
K D
Sbjct: 357 KPD 359
>RL4B_XENLA (P02385) 60S ribosomal protein L4B (L1B) (Fragment)
Length = 396
Score = 450 bits (1157), Expect = e-126
Identities = 222/389 (57%), Positives = 287/389 (73%), Gaps = 15/389 (3%)
Query: 6 AAARPLVTIQTLESEMSTDSPNTLPIPDVMRASIRPDIVNFVHSNISKNSRQPYAVSRKA 65
A ARPL+++ SE S + +P V +A IRPDIVNFVH+N+ KN+RQPYAVS+ A
Sbjct: 1 ACARPLISVY---SEKGETSGKNVTMPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSKLA 57
Query: 66 GHQTSAESWGTGRAVSRIPRVAGGGTHRAGQAAFGNMCRGGRMFAPTRIWRKWHRKINVN 125
GHQTSAESWGTGRAV+RIPRV GGGTHR+GQ AFGNMCRGGRMFAPT+ WR+WHR++N
Sbjct: 58 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTT 117
Query: 126 QKRYAVVSAIAASAIPSLVLARGHRIETVPEFPLVVGDAAEGVEKTKEAIKVLKQVGAFA 185
QKRYAV SA+AASA+P+L++++GHRIE +PE PLVV D E +KTKEA+ +LK++ A+
Sbjct: 118 QKRYAVCSALAASALPALIMSKGHRIEEIPEVPLVVEDKVESYKKTKEAVLLLKKLKAWN 177
Query: 186 DAEKAKDSLGIRPGKGKMRNRRYISRKGPLIVYGTDGAKAVKAFRNIPGVEITNVERLNL 245
D +K S +R GKGKMRNRR I R+GP ++Y + +KAFRNIPG+ + NV +LNL
Sbjct: 178 DIKKVYASQRMRAGKGKMRNRRRIQRRGPCVIYNENNG-IIKAFRNIPGITLLNVSKLNL 236
Query: 246 LKLAPGGHLGRFVIWTKSAFEKLDSIYGTFDKGSEKKKGYVLPRAKMVNSDLTRIINSDE 305
L+LAPGGH+GRF IWT+SAF KLD +YGT+ K ++ K Y LP KM N+DLTRI+ S E
Sbjct: 237 LRLAPGGHVGRFCIWTESAFRKLDDLYGTWRKSAKLKADYNLPMHKMTNTDLTRILKSQE 296
Query: 306 VQSVVRPIKKDVKRATLKKNPLKNLNVMLRLNPYAKTAKRMALLAEAERVKSKKEK---- 361
+Q +R K VKR LKKNPLKNL +M+RLNPYAKTA+R A+L + E +K+K++K
Sbjct: 297 IQRALRAPNKKVKRRELKKNPLKNLRIMMRLNPYAKTARRHAILQQLENIKAKEKKPDDG 356
Query: 362 -------FDKKRKIVSKEEASAIKAAGKA 383
D K K++ +A +A +A
Sbjct: 357 KPKAKKPLDAKTKMIKLAKAKKRQARAEA 385
>RL4_URECA (P49165) 60S ribosomal protein L4 (L1)
Length = 386
Score = 449 bits (1154), Expect = e-126
Identities = 220/376 (58%), Positives = 284/376 (75%), Gaps = 9/376 (2%)
Query: 7 AARPLVTIQTLESEMSTDSPNTLPIPDVMRASIRPDIVNFVHSNISKNSRQPYAVSRKAG 66
AARPL+T+ S+ S + + +P V RA IRPDIVNFVH + KN RQPYAVS+KAG
Sbjct: 2 AARPLITVH---SDKGAASESNVTLPAVFRAPIRPDIVNFVHFELKKNGRQPYAVSQKAG 58
Query: 67 HQTSAESWGTGRAVSRIPRVAGGGTHRAGQAAFGNMCRGGRMFAPTRIWRKWHRKINVNQ 126
HQTSAESWGTGRAV+RIPRV GGGTHR+GQ AFGNMCRG RMFAPT+ WR+WHR++N Q
Sbjct: 59 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGRRMFAPTKTWRRWHRRVNTTQ 118
Query: 127 KRYAVVSAIAASAIPSLVLARGHRIETVPEFPLVVGDAAEGVEKTKEAIKVLKQVGAFAD 186
+R+A+VSAIAA+ IP++V+++GH IE +PE PLVV D+ E ++KTKEA+ VL+++ A+ D
Sbjct: 119 RRHALVSAIAATGIPAVVMSKGHCIEQIPEVPLVVSDSVESIKKTKEAVVVLRRLKAWPD 178
Query: 187 AEKAKDSLGIRPGKGKMRNRRYISRKGPLIVYGTDGAKAVKAFRNIPGVEITNVERLNLL 246
EK K+S R GKGK+RNRR I R+GPLI+YGTD + +AFRNIPG+ + NV RLNLL
Sbjct: 179 VEKVKNSRRFRAGKGKLRNRRAIQRRGPLIIYGTDNGIS-RAFRNIPGITLVNVNRLNLL 237
Query: 247 KLAPGGHLGRFVIWTKSAFEKLDSIYGTFDKGSEKKKGYVLPRAKMVNSDLTRIINSDEV 306
+APGGH+GRF IWT+SAF++LD+IYGT+ + S +K Y LP KM N+DL+R++ SDE+
Sbjct: 238 SMAPGGHVGRFCIWTESAFKQLDNIYGTWKRPSAEKSHYNLPMPKMTNTDLSRLLKSDEI 297
Query: 307 QSVVRPIKKDVKRATLKKNPLKNLNVMLRLNPYAKTAKRMALLAEAERVKSKKEKFDKKR 366
Q+ +R KKD R KKNPLKN VM+RLNP+A K A E R+K K+ K D+KR
Sbjct: 298 QNALREPKKDKARRLQKKNPLKNYRVMMRLNPFAGAQKAAAKAVEQRRLKEKQAKLDQKR 357
Query: 367 KIVSKEEASAIKAAGK 382
I A+ ++ AGK
Sbjct: 358 GI-----ATPVEGAGK 368
>RL4_MOUSE (Q9D8E6) 60S ribosomal protein L4 (L1)
Length = 419
Score = 446 bits (1147), Expect = e-125
Identities = 216/378 (57%), Positives = 279/378 (73%), Gaps = 4/378 (1%)
Query: 6 AAARPLVTIQTLESEMSTDSPNTLPIPDVMRASIRPDIVNFVHSNISKNSRQPYAVSRKA 65
A ARPL+++ SE S + +P V +A IRPDIVNFVH+N+ KN+RQPYAVS A
Sbjct: 2 ACARPLISVY---SEKGESSGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELA 58
Query: 66 GHQTSAESWGTGRAVSRIPRVAGGGTHRAGQAAFGNMCRGGRMFAPTRIWRKWHRKINVN 125
GHQTSAESWGTGRAV+RIPRV GGGTHR+GQ AFGNMCRGGRMFAPT+ WR+WHR++N
Sbjct: 59 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTT 118
Query: 126 QKRYAVVSAIAASAIPSLVLARGHRIETVPEFPLVVGDAAEGVEKTKEAIKVLKQVGAFA 185
QKRYA+ SA+AASA+P+LV+++GHRIE VPE PLVV D EG +KTKEA+++LK++ A+
Sbjct: 119 QKRYAICSALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVQLLKKLKAWN 178
Query: 186 DAEKAKDSLGIRPGKGKMRNRRYISRKGPLIVYGTDGAKAVKAFRNIPGVEITNVERLNL 245
D +K S +R GKGKMRNRR I R+GP I+Y D +KAFRNIPG+ + NV +LN+
Sbjct: 179 DIKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNG-IIKAFRNIPGITLLNVSKLNI 237
Query: 246 LKLAPGGHLGRFVIWTKSAFEKLDSIYGTFDKGSEKKKGYVLPRAKMVNSDLTRIINSDE 305
LKLAPGGH+GRF IWT+SAF KLD +YGT+ K + K Y LP KM+N+DL+RI+ S E
Sbjct: 238 LKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPMHKMMNTDLSRILKSPE 297
Query: 306 VQSVVRPIKKDVKRATLKKNPLKNLNVMLRLNPYAKTAKRMALLAEAERVKSKKEKFDKK 365
+Q +R +K + R LKKNPLKNL +ML+LNPYAKT +R +L +A K + +K +
Sbjct: 298 IQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILRQARNHKLRVKKLEAA 357
Query: 366 RKIVSKEEASAIKAAGKA 383
++ + + G A
Sbjct: 358 ATALATKSEKVVPEKGTA 375
>RL4_HUMAN (P36578) 60S ribosomal protein L4 (L1)
Length = 427
Score = 444 bits (1142), Expect = e-124
Identities = 217/377 (57%), Positives = 276/377 (72%), Gaps = 4/377 (1%)
Query: 6 AAARPLVTIQTLESEMSTDSPNTLPIPDVMRASIRPDIVNFVHSNISKNSRQPYAVSRKA 65
A ARPL+++ SE S + +P V +A IRPDIVNFVH+N+ KN+RQPYAVS A
Sbjct: 2 ACARPLISVY---SEKGESSGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELA 58
Query: 66 GHQTSAESWGTGRAVSRIPRVAGGGTHRAGQAAFGNMCRGGRMFAPTRIWRKWHRKINVN 125
GHQTSAESWGTGRAV+RIPRV GGGTHR+GQ AFGNMCRGGRMFAPT+ WR+WHR++N
Sbjct: 59 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTT 118
Query: 126 QKRYAVVSAIAASAIPSLVLARGHRIETVPEFPLVVGDAAEGVEKTKEAIKVLKQVGAFA 185
QKRYA+ SA+AASA+P+LV+++GHRIE VPE PLVV D EG +KTKEA+ +LK++ A+
Sbjct: 119 QKRYAICSALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWN 178
Query: 186 DAEKAKDSLGIRPGKGKMRNRRYISRKGPLIVYGTDGAKAVKAFRNIPGVEITNVERLNL 245
D +K S +R GKGKMRNRR I R+GP I+Y D +KAFRNIPG+ + NV +LN+
Sbjct: 179 DIKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNG-IIKAFRNIPGITLLNVSKLNI 237
Query: 246 LKLAPGGHLGRFVIWTKSAFEKLDSIYGTFDKGSEKKKGYVLPRAKMVNSDLTRIINSDE 305
LKLAPGGH+GRF IWT+SAF KLD +YGT+ K + K Y LP KM+N+DL+RI+ S E
Sbjct: 238 LKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPMHKMINTDLSRILKSPE 297
Query: 306 VQSVVRPIKKDVKRATLKKNPLKNLNVMLRLNPYAKTAKRMALLAEAERVKSKKEKFDKK 365
+Q +R +K + R LKKNPLKNL +ML+LNPYAKT +R +L +A K + +K
Sbjct: 298 IQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILRQARNHKLRVDKAAAA 357
Query: 366 RKIVSKEEASAIKAAGK 382
+ + AGK
Sbjct: 358 AAALQAKSDEKAAVAGK 374
>RL4_RAT (P50878) 60S ribosomal protein L4 (L1)
Length = 421
Score = 440 bits (1132), Expect = e-123
Identities = 218/383 (56%), Positives = 280/383 (72%), Gaps = 12/383 (3%)
Query: 6 AAARPLVTIQTLESEMSTDSPNTLPIPDVMRASIRPDIVNFVHSNISKNSRQPYAVSRKA 65
A ARPL+++ SE S + +P V +A IRPDIVNFVH+N+ KN+RQPYAVS A
Sbjct: 2 ACARPLISVY---SEKGESSGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELA 58
Query: 66 GHQTSAESWGTGRAVSRIPRVAGGGTHRAGQAAFGNMCRGGRMFAPTRIWRKWHRKINVN 125
GHQTSAESWGTGRAV+RIPRV GGGTHR+GQ AFGNMCRGGRMFAPT+ WR+WHR++N
Sbjct: 59 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTT 118
Query: 126 QKRYAVVSAIAASAIPSLVLARGHRIETVPEFPLVVGDAAEGVEKTKEAIKVLKQVGAFA 185
QKRYA+ SA+AASA+P+LV+++GH +E VPE PLVV D E +KTKEA+++LK++ A+
Sbjct: 119 QKRYAICSALAASALPALVMSKGHCVEEVPELPLVVEDKVESYKKTKEAVQLLKKLKAWN 178
Query: 186 DAEKAKDSLGIRPGKGKMRNRRYISRKGPLIVYGTDGAKAVKAFRNIPGVEITNVERLNL 245
D +K S +R GKGKMRNRR I R+GP I+Y D +KAFRNIPG+ + NV +LN+
Sbjct: 179 DIKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNG-IIKAFRNIPGITLLNVSKLNI 237
Query: 246 LKLAPGGHLGRFVIWTKSAFEKLDSIYGTFDKGSEKKKGYVLPRAKMVNSDLTRIINSDE 305
LKLAPGGH+GRF IWT+SAF KLD +YGT+ K + K Y LP KM+N+DL+RI+ S E
Sbjct: 238 LKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPMHKMMNTDLSRILKSPE 297
Query: 306 VQSVVRPIKKDVKRATLKKNPLKNLNVMLRLNPYAKTAKRMALLAEAERVKSKKEKFD-- 363
+Q +R +K + R LKKNPLKNL +ML+LNPYAKT +R +L +A K + +K +
Sbjct: 298 IQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILRQARNHKLRVKKLEAA 357
Query: 364 ------KKRKIVSKEEASAIKAA 380
K KIV ++ A K A
Sbjct: 358 AAALAAKSEKIVPEKGAGDKKPA 380
>RL4A_SCHPO (P35679) 60S ribosomal protein L4-A (L2)
Length = 363
Score = 433 bits (1114), Expect = e-121
Identities = 218/359 (60%), Positives = 275/359 (75%), Gaps = 6/359 (1%)
Query: 6 AAARPLVTIQTLESEMSTDSPNTLPIPDVMRASIRPDIVNFVHSNISKNSRQPYAVSRKA 65
AAARP V+I + + +S++ T+ +P V +A IRPD+V VH+ ++KN RQPYAVS KA
Sbjct: 2 AAARPTVSIYSKDGSVSSE---TIALPFVFKAPIRPDLVRSVHTAVAKNKRQPYAVSEKA 58
Query: 66 GHQTSAESWGTGRAVSRIPRVAGGGTHRAGQAAFGNMCRGGRMFAPTRIWRKWHRKINVN 125
GHQTSAESWGTGRA++RIPRV GGGTHR+GQAAFGNMCR GRMFAPT+ WRKWH K+N N
Sbjct: 59 GHQTSAESWGTGRALARIPRVGGGGTHRSGQAAFGNMCRSGRMFAPTKTWRKWHVKVNQN 118
Query: 126 QKRYAVVSAIAASAIPSLVLARGHRIETVPEFPLVVGDAAEGVEKTKEAIKVLKQVGAFA 185
+KRYA+ SA+AAS +PSL+LARGHRIE +PE PLVV DA + +KTKEA+ +LK++ A+
Sbjct: 119 EKRYAISSAVAASGVPSLLLARGHRIEEIPEVPLVVDDAVQSFQKTKEAVALLKEIKAYR 178
Query: 186 DAEKAKDSLGIRPGKGKMRNRRYISRKGPLIVYGTDGAKAVKAFRNIPGVEITNVERLNL 245
D K +S +R GKGK+RNRR++ R+GPL+V+ D A VKAFRNIPGVEI NV RLNL
Sbjct: 179 DVVKVANSRKLRAGKGKLRNRRHVQRRGPLVVFNED-AGIVKAFRNIPGVEIVNVRRLNL 237
Query: 246 LKLAPGGHLGRFVIWTKSAFEKLDSIYGTFDKGSEKKKGYVLPRAKMVNSDLTRIINSDE 305
L+LAPGGHLGRFVIWTKSAF LDS++G+ + ++ KK Y LP + N+D+TR+INSDE
Sbjct: 238 LQLAPGGHLGRFVIWTKSAFGLLDSVFGSTTEAAQLKKNYFLPENIISNADVTRLINSDE 297
Query: 306 VQSVVRPI-KKDVKRATL-KKNPLKNLNVMLRLNPYAKTAKRMALLAEAERVKSKKEKF 362
+QS+V+ VKRA + KKNPLKN V+ RLNPYAK K L + K+ EKF
Sbjct: 298 IQSIVKAAGPSRVKRAHVQKKNPLKNKAVLARLNPYAKAYKANVKLNTGKTPKAAGEKF 356
>RL4B_SCHPO (Q9P784) 60s ribosomal protein L4-B
Length = 363
Score = 430 bits (1106), Expect = e-120
Identities = 217/359 (60%), Positives = 273/359 (75%), Gaps = 6/359 (1%)
Query: 6 AAARPLVTIQTLESEMSTDSPNTLPIPDVMRASIRPDIVNFVHSNISKNSRQPYAVSRKA 65
AAARP V+I + +S++ TL +P V +A IRPD+V VH+ ++KN RQPYAVS KA
Sbjct: 2 AAARPTVSIYNKDGSVSSE---TLALPFVFKAPIRPDLVRSVHTAVAKNKRQPYAVSEKA 58
Query: 66 GHQTSAESWGTGRAVSRIPRVAGGGTHRAGQAAFGNMCRGGRMFAPTRIWRKWHRKINVN 125
GHQTSAESWGTGRA++RIPRV GGGTHR+GQAAFGNMCR GRMFAPT+ WRKWH K+N N
Sbjct: 59 GHQTSAESWGTGRALARIPRVGGGGTHRSGQAAFGNMCRSGRMFAPTKTWRKWHVKVNQN 118
Query: 126 QKRYAVVSAIAASAIPSLVLARGHRIETVPEFPLVVGDAAEGVEKTKEAIKVLKQVGAFA 185
+KRYA+ SA+AAS +PSL+LARGHRIE +PE PLVV DA + +KTKEA+ +LK++ A+
Sbjct: 119 EKRYAIASAVAASGVPSLLLARGHRIEEIPEVPLVVDDAVQSFQKTKEAVALLKEIKAYR 178
Query: 186 DAEKAKDSLGIRPGKGKMRNRRYISRKGPLIVYGTDGAKAVKAFRNIPGVEITNVERLNL 245
D K +S +R GKGK+RNRR++ R+GPL+V+ D VKAFRNIPGVEI NV RLNL
Sbjct: 179 DVIKVANSRKLRAGKGKLRNRRHVQRRGPLVVFNED-TGIVKAFRNIPGVEIVNVRRLNL 237
Query: 246 LKLAPGGHLGRFVIWTKSAFEKLDSIYGTFDKGSEKKKGYVLPRAKMVNSDLTRIINSDE 305
L+LAPGGHLGRFVIWTKSAF LDS++G+ + ++ KK Y LP + N+D+TR+INSDE
Sbjct: 238 LQLAPGGHLGRFVIWTKSAFGLLDSVFGSTTEVAQLKKNYFLPENIISNADVTRLINSDE 297
Query: 306 VQSVVRPI-KKDVKRATL-KKNPLKNLNVMLRLNPYAKTAKRMALLAEAERVKSKKEKF 362
+QS+V+ VKRA + KKNPLKN V+ RLNPYAK K + + K+ EKF
Sbjct: 298 IQSIVKAAGPSRVKRAHVQKKNPLKNKAVLSRLNPYAKAYKANVKINSEKTPKAAGEKF 356
>RL4_CANFA (Q28346) 60S ribosomal protein L4 (L1) (Fragment)
Length = 420
Score = 425 bits (1093), Expect = e-119
Identities = 208/368 (56%), Positives = 269/368 (72%), Gaps = 4/368 (1%)
Query: 6 AAARPLVTIQTLESEMSTDSPNTLPIPDVMRASIRPDIVNFVHSNISKNSRQPYAVSRKA 65
A ARPL+++ SE S + +P V +A IRPDIVNFVH+N+ KN+RQPYAVS A
Sbjct: 1 ACARPLISVY---SEKGESSGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELA 57
Query: 66 GHQTSAESWGTGRAVSRIPRVAGGGTHRAGQAAFGNMCRGGRMFAPTRIWRKWHRKINVN 125
GHQTSAESWGTGRAV+RIPRV GGGTHR+GQ AFGNMCRGGRMFAPT+ WR+WHR++N
Sbjct: 58 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTT 117
Query: 126 QKRYAVVSAIAASAIPSLVLARGHRIETVPEFPLVVGDAAEGVEKTKEAIKVLKQVGAFA 185
QKRYA+ SA+A ++P+LV+++GHRIE VPE PLVV D EG +KTKEA+ +LK++ A+
Sbjct: 118 QKRYAICSALACLSLPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWN 177
Query: 186 DAEKAKDSLGIRPGKGKMRNRRYISRKGPLIVYGTDGAKAVKAFRNIPGVEITNVERLNL 245
D +K S +R GKGKMRNRR I R+GP I+Y D +KAFR PG+ + NV +LN+
Sbjct: 178 DIKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNG-IIKAFRKHPGITLLNVSKLNI 236
Query: 246 LKLAPGGHLGRFVIWTKSAFEKLDSIYGTFDKGSEKKKGYVLPRAKMVNSDLTRIINSDE 305
LKLAPGGH+GRF IWT+SAF KLD +YGT+ K + K Y LP KM+N+DL+RI+
Sbjct: 237 LKLAPGGHVGRFCIWTESAFRKLDDLYGTWRKAASLKSNYNLPMHKMLNTDLSRILKMPR 296
Query: 306 VQSVVRPIKKDVKRATLKKNPLKNLNVMLRLNPYAKTAKRMALLAEAERVKSKKEKFDKK 365
+R +K + R LKKNPLKNL +ML+LNPYAKT +R +L +A+ K + +K
Sbjct: 297 DPRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILRQAKNHKLRMDKAAAA 356
Query: 366 RKIVSKEE 373
+ S+E+
Sbjct: 357 LEAKSEEK 364
>RL4_DROME (P09180) 60S ribosomal protein L4 (L1)
Length = 407
Score = 405 bits (1042), Expect = e-113
Identities = 201/361 (55%), Positives = 272/361 (74%), Gaps = 3/361 (0%)
Query: 8 ARPLVTIQTLESEMSTDSPNTLPIPDVMRASIRPDIVNFVHSNISKNSRQPYAVSRKAGH 67
ARPLV++ T ++E + D + +P V +A IRPD+VN VH + +N+RQ YAVS AGH
Sbjct: 6 ARPLVSVYTEKNEPAKDK--NICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSELAGH 63
Query: 68 QTSAESWGTGRAVSRIPRVAGGGTHRAGQAAFGNMCRGGRMFAPTRIWRKWHRKINVNQK 127
QTSAESWGTGRAV+RIPRV GGGTHR+GQ AFGNMCRGGRMFAPT+ +R+WHRK+NVNQ+
Sbjct: 64 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRKVNVNQR 123
Query: 128 RYAVVSAIAASAIPSLVLARGHRIETVPEFPLVVGDAAEGVEKTKEAIKVLKQVGAFADA 187
RYA+VSAIAAS +P+LV ++GH I+ V EFPLVV D + V+KTK+A+ L+++ +AD
Sbjct: 124 RYALVSAIAASGVPALVQSKGHVIDGVSEFPLVVSDEVQKVQKTKQAVIFLRRLKIWADI 183
Query: 188 EKAKDSLGIRPGKGKMRNRRYISRKGPLIVYGTDGAKAVKAFRNIPGVEITNVERLNLLK 247
+K S R G+G MR+RR I+R+GPL+VY D KAFRNIPG+E NV++LN+LK
Sbjct: 184 QKVYKSQRFRAGRGTMRDRRRIARRGPLVVYDKDEGLR-KAFRNIPGIETINVDKLNVLK 242
Query: 248 LAPGGHLGRFVIWTKSAFEKLDSIYGTFDKGSEKKKGYVLPRAKMVNSDLTRIINSDEVQ 307
LAPGGH+GRFVIWT+SAF +L+ ++GT+ K S KKGY LP+ KM N+DL+R++ S+E++
Sbjct: 243 LAPGGHVGRFVIWTESAFARLNDLFGTWKKPSTLKKGYNLPQPKMANTDLSRLLKSEEIR 302
Query: 308 SVVRPIKKDVKRATLKKNPLKNLNVMLRLNPYAKTAKRMALLAEAERVKSKKEKFDKKRK 367
V+R +K V R+ + NPL N+ +++LNPYA+ KR A LA +R +K KK+
Sbjct: 303 KVLRDPRKRVFRSVRRLNPLTNVRQLIKLNPYAEVLKRRAALAAEKRTVAKVLAKAKKQN 362
Query: 368 I 368
+
Sbjct: 363 V 363
>RL4B_YEAST (P49626) 60S ribosomal protein L4-B (L2B) (RP2)
Length = 361
Score = 402 bits (1033), Expect = e-112
Identities = 214/368 (58%), Positives = 262/368 (71%), Gaps = 15/368 (4%)
Query: 8 ARPLVTIQTLESEMSTDSPNTLPIPDVMRASIRPDIVNFVHSNISKNSRQPYAVSRKAGH 67
+RP VT+ +L E + N LP+P V A IRPDIV+ V ++++KN RQ YAVS KAGH
Sbjct: 1 SRPQVTVHSLTGEATA---NALPLPAVFSAPIRPDIVHTVFTSVNKNKRQAYAVSEKAGH 57
Query: 68 QTSAESWGTGRAVSRIPRVAGGGTHRAGQAAFGNMCRGGRMFAPTRIWRKWHRKINVNQK 127
QTSAESWGTGRAV+RIPRV GGGT R+GQ AFGNMCRGGRMFAPT+ WRKW+ K+N N+K
Sbjct: 58 QTSAESWGTGRAVARIPRVGGGGTGRSGQGAFGNMCRGGRMFAPTKTWRKWNVKVNHNEK 117
Query: 128 RYAVVSAIAASAIPSLVLARGHRIETVPEFPLVVGDAAEGVEKTKEAIKVLKQVGAFADA 187
RYA SAIAA+A+ SLVLARGHR+E +PE PLVV E ++KTKEA+ LK VGA +D
Sbjct: 118 RYATASAIAATAVASLVLARGHRVEKIPEIPLVVSTDLESIQKTKEAVAALKAVGAHSDL 177
Query: 188 EKAKDSLGIRPGKGKMRNRRYISRKGPLIVYGTDGAKAVKAFRNIPGVEITNVERLNLLK 247
K S +R GKGK RNRR+ R+GPL+VY D VKA RN+PGVE NV LNLL+
Sbjct: 178 LKVLKSKKLRAGKGKYRNRRWTQRRGPLVVYAEDNG-IVKALRNVPGVETANVASLNLLQ 236
Query: 248 LAPGGHLGRFVIWTKSAFEKLDSIYGTFDKGSEKKKGYVLPRAKMVNSDLTRIINSDEVQ 307
LAPG HLGRFVIWT++AF KLD ++G+ + + K GY LP + SD+TRIINS E+Q
Sbjct: 237 LAPGAHLGRFVIWTEAAFTKLDQVWGS-ETVASSKVGYTLPSHIISTSDVTRIINSSEIQ 295
Query: 308 SVVRPIKKDVKRAT--LKKNPLKNLNVMLRLNPYAKTAKRMALLAEAERVKSKK-EKFDK 364
S +RP + ++ T LKKNPLKN V+LRLNPYAK + AE++ SKK EK
Sbjct: 296 SAIRPAGQATQKRTHVLKKNPLKNKQVLLRLNPYAK-------VFAAEKLGSKKAEKTGT 348
Query: 365 KRKIVSKE 372
K V E
Sbjct: 349 KPAAVFAE 356
>RL4A_YEAST (P10664) 60S ribosomal protein L4-A (L2A) (RP2)
Length = 361
Score = 402 bits (1033), Expect = e-112
Identities = 214/368 (58%), Positives = 262/368 (71%), Gaps = 15/368 (4%)
Query: 8 ARPLVTIQTLESEMSTDSPNTLPIPDVMRASIRPDIVNFVHSNISKNSRQPYAVSRKAGH 67
+RP VT+ +L E + N LP+P V A IRPDIV+ V ++++KN RQ YAVS KAGH
Sbjct: 1 SRPQVTVHSLTGEATA---NALPLPAVFSAPIRPDIVHTVFTSVNKNKRQAYAVSEKAGH 57
Query: 68 QTSAESWGTGRAVSRIPRVAGGGTHRAGQAAFGNMCRGGRMFAPTRIWRKWHRKINVNQK 127
QTSAESWGTGRAV+RIPRV GGGT R+GQ AFGNMCRGGRMFAPT+ WRKW+ K+N N+K
Sbjct: 58 QTSAESWGTGRAVARIPRVGGGGTGRSGQGAFGNMCRGGRMFAPTKTWRKWNVKVNHNEK 117
Query: 128 RYAVVSAIAASAIPSLVLARGHRIETVPEFPLVVGDAAEGVEKTKEAIKVLKQVGAFADA 187
RYA SAIAA+A+ SLVLARGHR+E +PE PLVV E ++KTKEA+ LK VGA +D
Sbjct: 118 RYATASAIAATAVASLVLARGHRVEKIPEIPLVVSTDLESIQKTKEAVAALKAVGAHSDL 177
Query: 188 EKAKDSLGIRPGKGKMRNRRYISRKGPLIVYGTDGAKAVKAFRNIPGVEITNVERLNLLK 247
K S +R GKGK RNRR+ R+GPL+VY D VKA RN+PGVE NV LNLL+
Sbjct: 178 LKVLKSKKLRAGKGKYRNRRWTQRRGPLVVYAEDNG-IVKALRNVPGVETANVASLNLLQ 236
Query: 248 LAPGGHLGRFVIWTKSAFEKLDSIYGTFDKGSEKKKGYVLPRAKMVNSDLTRIINSDEVQ 307
LAPG HLGRFVIWT++AF KLD ++G+ + + K GY LP + SD+TRIINS E+Q
Sbjct: 237 LAPGAHLGRFVIWTEAAFTKLDQVWGS-ETVASSKVGYTLPSHIISTSDVTRIINSSEIQ 295
Query: 308 SVVRPIKKDVKRAT--LKKNPLKNLNVMLRLNPYAKTAKRMALLAEAERVKSKK-EKFDK 364
S +RP + ++ T LKKNPLKN V+LRLNPYAK + AE++ SKK EK
Sbjct: 296 SAIRPAGQATQKRTHVLKKNPLKNKQVLLRLNPYAK-------VFAAEKLGSKKAEKTGT 348
Query: 365 KRKIVSKE 372
K V E
Sbjct: 349 KPAAVFTE 356
>RL4_TRYBB (P49669) 60S ribosomal protein L4 (L1)
Length = 374
Score = 379 bits (973), Expect = e-105
Identities = 196/372 (52%), Positives = 263/372 (70%), Gaps = 13/372 (3%)
Query: 8 ARPLVTIQTLESEMSTDSPNTLPIPDVMRASIRPDIVNFVHSNISKNSRQPYAVSRKAGH 67
ARP V++ + + T +P V A IR D+V FVH+N++KNSRQPYAV+R +G
Sbjct: 3 ARPSVSVYSASEDKVV---GTCSLPAVFTAPIRHDVVQFVHTNMAKNSRQPYAVNRLSGM 59
Query: 68 QTSAESWGTGRAVSRIPRVAGGGTHRAGQAAFGNMCRGGRMFAPTRIWRKWHRKINVNQK 127
+ S ESWGTGRAV+RIPR+ GGGT +G AFGNMCRGGRMFAPT+I+R+WHRKIN++QK
Sbjct: 60 KHSTESWGTGRAVARIPRIHGGGTSMSGAGAFGNMCRGGRMFAPTKIFRRWHRKINLHQK 119
Query: 128 RYAVVSAIAASAIPSLVLARGHRIETVPEFPLVVGDAAEGVEKTKEAIKVLKQVGAFADA 187
R+AVVSA+AAS++P+LV++RGH+IE V E PLVV D EKTKEA+ LK VGA D
Sbjct: 120 RFAVVSALAASSLPALVMSRGHKIENVAEVPLVVEDGVRAYEKTKEAMTFLKTVGAIDDV 179
Query: 188 EKAKDSLGIRPGKGKMRNRRYISRKGPLIVYGTDGAKAVKAFRNIPGVEITNVERLNLLK 247
+ DS IR G+GKMRNRRY++R+GP++V + K +AFRNI G+++ NV LNLL
Sbjct: 180 NRVNDSRQIRAGRGKMRNRRYVARRGPMLVMPDN--KGTRAFRNIFGLDLANVNSLNLLH 237
Query: 248 LAPGGHLGRFVIWTKSAFEKLDSIYGTFDKGSEKKKGYVLPRAKMVNSDLTRIINSDEVQ 307
LAPGGH+GRF+IWTKSAFEKLD I+GTF + S K G++LP + ++D+TRI+ S+EV+
Sbjct: 238 LAPGGHVGRFIIWTKSAFEKLDKIFGTFTEPSTVKSGFMLPAPMLTSTDVTRIMQSEEVR 297
Query: 308 SVVRPIKKDVKRATLKKNP---LKNLNVMLRLNPYAKTAKRMALLAEAE-----RVKSKK 359
V++P K KR + + P ++N + LRLNP+ K K MA + + R +K
Sbjct: 298 RVLKPKKLQPKRPSRYRQPTNGIRNRRLRLRLNPFQKKEKAMAKGMQNKKNREARHAAKV 357
Query: 360 EKFDKKRKIVSK 371
+ K RK V+K
Sbjct: 358 VRLAKARKNVAK 369
>RL4_CAEEL (O02056) 60S ribosomal protein L4
Length = 345
Score = 370 bits (950), Expect = e-102
Identities = 191/354 (53%), Positives = 250/354 (69%), Gaps = 11/354 (3%)
Query: 7 AARPLVTIQTLESEMSTDSPNTLPIPDVMRASIRPDIVNFVHSNISKNSRQPYAVSRKAG 66
AARPLVT+ + E + + +P V R IRPD+V+F+ + +N RQ +AV+ KAG
Sbjct: 2 AARPLVTVYDEKYEATQSQ---IRLPAVFRTPIRPDLVSFIADQVRRNRRQAHAVNTKAG 58
Query: 67 HQTSAESWGTGRAVSRIPRVAGGGTHRAGQAAFGNMCRGGRMFAPTRIWRKWHRKINVNQ 126
Q SAESWGTGRAV+RIPRV GGGTHR+GQ AFGNMCRGG MFAP +++R+WHR +N+ Q
Sbjct: 59 KQHSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGHMFAPLKVFRRWHRNVNIAQ 118
Query: 127 KRYAVVSAIAASAIPSLVLARGHRIETVPEFPLVVGDAAEGVEKTKEAIKVLKQVGAFAD 186
KRYAV SAIAAS IP+L+ ARGH I+ V E PLVV D E KTKEA+ L++ +AD
Sbjct: 119 KRYAVSSAIAASGIPALLQARGHVIDQVAEVPLVVSDKVESFRKTKEAVVFLRRSHLWAD 178
Query: 187 AEKAKDSLGIRPGKGKMRNRRYISRKGPLIVYGTDGAKAVKAFRNIPGVEITNVERLNLL 246
EK +S R GKGK+RNR++ + GP+++YG D A+ +AFRNIPGV++ NVERLNLL
Sbjct: 179 IEKVYNSKRNRAGKGKLRNRQHKQKLGPVVIYGQD-AECARAFRNIPGVDVMNVERLNLL 237
Query: 247 KLAPGGHLGRFVIWTKSAFEKLDSIYG-TFDKGSEKKKGYVLPRAKMVNSDLTRIINSDE 305
KLAPGGHLGR +IWT+SAF+KLD+IYG T S+ KKG+ +P M NSD +RII S+E
Sbjct: 238 KLAPGGHLGRLIIWTESAFKKLDTIYGTTVANSSQLKKGWSVPLPIMANSDFSRIIRSEE 297
Query: 306 VQSVVRPIKKDVKRATLKKNPLKNLNVMLRLNPYAKTAKRMALLAEAERVKSKK 359
V +R KK+ + +NPLK ++ +LNPYA ++L +A + KK
Sbjct: 298 VVKAIRAPKKNPVLPKVHRNPLKKRTLLYKLNPYA------SILRKASKANVKK 345
>RL4_ENTHI (O15594) 60S ribosomal protein L4 (L1) (Fragments)
Length = 245
Score = 234 bits (598), Expect = 2e-61
Identities = 119/230 (51%), Positives = 159/230 (68%), Gaps = 8/230 (3%)
Query: 64 KAGHQTSAESWGTGRAVSRIPRVAGGGTHRAGQAAFGNMCRGGRMFAPTRIWRKWHRKIN 123
KAG Q SA SWGTGRAV+RIPR++G G+ R GQ AFGNM R G MF+P + +RKW RK
Sbjct: 3 KAGKQHSAISWGTGRAVARIPRISGSGSGRNGQGAFGNMTRKGHMFSPLKNFRKWQRKTP 62
Query: 124 VNQKRYAVVSAIAASAIPSLVLARGHRIETVPEFPLVV--------GDAAEGVEKTKEAI 175
+R+AV S IAASA+P+LV ARGH I VP+ P V + ++KTK+A+
Sbjct: 63 KQMRRFAVASCIAASAVPALVSARGHHIAGVPQLPSVSFLQPQFHSSKSISVIKKTKQAV 122
Query: 176 KVLKQVGAFADAEKAKDSLGIRPGKGKMRNRRYISRKGPLIVYGTDGAKAVKAFRNIPGV 235
+LK++ A++D K S IR G+GKMR R+ RKGPL+VYG D +AVKAFRNIPGV
Sbjct: 123 YLLKKINAYSDVLKVIASKTIRAGQGKMRGRKIKERKGPLVVYGNDDLQAVKAFRNIPGV 182
Query: 236 EITNVERLNLLKLAPGGHLGRFVIWTKSAFEKLDSIYGTFDKGSEKKKGY 285
+ VE L++L LAPG H+GRF+IW +SAF+KL++ +GT + ++ G+
Sbjct: 183 DTCRVENLSVLNLAPGCHMGRFIIWPESAFKKLNTTFGTQKEMAQGPSGF 232
>RL4_METTH (O26111) 50S ribosomal protein L4P
Length = 254
Score = 185 bits (469), Expect = 2e-46
Identities = 101/261 (38%), Positives = 151/261 (57%), Gaps = 10/261 (3%)
Query: 12 VTIQTLESEMSTDSPNTLPIPDVMRASIRPDIVNFVHSNISKNSRQPYAVSRKAGHQTSA 71
+ + +LE E + + +P++ RPD++ + QP+ AG +TSA
Sbjct: 3 IKVYSLEGEAIDE----MELPEIFNEEFRPDVIKRAVLSAQTARVQPWGPDPMAGKRTSA 58
Query: 72 ESWGTGRAVSRIPRVAGGGTHRAGQAAFGNMCRGGRMFAPTRIWRKWHRKINVNQKRYAV 131
+S+G GR V+ +PR+ G +AAF GGR P R + +H +IN ++R A+
Sbjct: 59 QSYGAGRGVAMVPRIKNGS-----RAAFVPQAVGGRRAHPPRPQKNYHERINRKERRLAI 113
Query: 132 VSAIAASAIPSLVLARGHRIETVPEFPLVVGDAAEGVEKTKEAIKVLKQVGAFADAEKAK 191
SA+AA+A LV ARGHRIE VP+ PLVV D +++T + +V +++G D +A+
Sbjct: 114 RSAVAATARKDLVEARGHRIENVPQLPLVVDDELSMIKRTADTREVFRKLGIMDDIVRAR 173
Query: 192 DSLGIRPGKGKMRNRRYISRKGPLIVYGTDGAKAVKAFRNIPGVEITNVERLNLLKLAPG 251
+ IR GKGKMR R+Y + +GPLIV G D + RN PGV++ VE LN LAPG
Sbjct: 174 EGKKIRAGKGKMRGRKYRTPRGPLIVVGDDKG-ITRGARNHPGVDVVRVENLNAELLAPG 232
Query: 252 GHLGRFVIWTKSAFEKLDSIY 272
H GR ++T+SA EKLD ++
Sbjct: 233 THPGRLTVFTRSAIEKLDELF 253
>RL4_PYRAE (Q8ZW51) 50S ribosomal protein L4P
Length = 283
Score = 174 bits (442), Expect = 3e-43
Identities = 98/234 (41%), Positives = 133/234 (55%), Gaps = 3/234 (1%)
Query: 39 IRPDIVNFVHSNISKNSRQPYAVSRKAGHQTSAESWGTGRAVSRIPRVAGGGTHRAGQAA 98
IRPD++ + + QP V AG + S ES+G G ++RIPR G R
Sbjct: 52 IRPDLIRRAYLSALSARFQPKGVYEGAGKEHSCESFGVGLGIARIPRYKGSLWPRG---C 108
Query: 99 FGNMCRGGRMFAPTRIWRKWHRKINVNQKRYAVVSAIAASAIPSLVLARGHRIETVPEFP 158
F RGGR P ++ +K H +IN +K+ A+ SAIAA+A S V ARGH +E VP P
Sbjct: 109 FAPNTRGGRRAHPPKVEKKLHEEINKKEKKLAIRSAIAATAYRSWVAARGHVVEKVPSLP 168
Query: 159 LVVGDAAEGVEKTKEAIKVLKQVGAFADAEKAKDSLGIRPGKGKMRNRRYISRKGPLIVY 218
+VV AE + + KEA K+ + +G + D E+A + + IR GKGKMR RRY K L+V
Sbjct: 169 VVVVGDAEKINRAKEAKKLFEALGLWPDVERAAEGVKIRAGKGKMRGRRYKEPKSVLVVV 228
Query: 219 GTDGAKAVKAFRNIPGVEITNVERLNLLKLAPGGHLGRFVIWTKSAFEKLDSIY 272
A + A RN PGV++ V LN+L LAPGG GR +WT A EKL ++
Sbjct: 229 SDLNAPLIAAVRNFPGVDVVAVNNLNILVLAPGGVPGRLTLWTAPAVEKLRGLF 282
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.316 0.131 0.374
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 45,669,848
Number of Sequences: 164201
Number of extensions: 1887395
Number of successful extensions: 6177
Number of sequences better than 10.0: 87
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 45
Number of HSP's that attempted gapping in prelim test: 6059
Number of HSP's gapped (non-prelim): 99
length of query: 408
length of database: 59,974,054
effective HSP length: 113
effective length of query: 295
effective length of database: 41,419,341
effective search space: 12218705595
effective search space used: 12218705595
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 67 (30.4 bits)
Medicago: description of AC123596.12