BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC123593.8 + phase: 0
(550 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
LPRC_HUMAN (P42704) 130 kDa leucine-rich protein (LRP 130) (GP13... 59 4e-08
YLE1_SCHPO (Q10451) Hypothetical protein C1093.01 in chromosome I 52 5e-06
YG3M_YEAST (P48237) Hypothetical 101.4 kDa protein in RPL24B-RSR... 42 0.004
Y391_HUMAN (O15091) Hypothetical protein KIAA0391 39 0.027
RPOM_HUMAN (O00411) DNA-directed RNA polymerase, mitochondrial p... 36 0.23
PT09_YEAST (P32522) PET309 protein, mitochondrial precursor 36 0.23
RPOM_MOUSE (Q8BKF1) DNA-directed RNA polymerase, mitochondrial p... 35 0.39
YKK5_YEAST (P34250) Hypothetical 125.6 kDa protein in AAT1-GFA1 ... 33 1.5
SP98_DICDI (Q95ZG4) Spindle pole body component 98 (Spc98) (DdSp... 33 1.5
MYS3_HUMAN (Q92794) MYST histone acetyltransferase 3 (Runt-relat... 33 1.5
MUTL_BUCBP (Q89A38) DNA mismatch repair protein mutL 33 1.9
MAD3_YEAST (P47074) Spindle assembly checkpoint component MAD3 (... 32 3.3
SRB9_YEAST (P38931) Suppressor of RNA polymerase B SRB9 (SCA1 pr... 32 4.3
RFAY_ECOLI (P27240) Lipopolysaccharide core biosynthesis protein... 32 4.3
YH32_AQUAE (O67622) Hypothetical UPF0144 protein AQ_1732 31 7.3
Y136_ARCFU (O30101) Hypothetical protein AF0136 31 7.3
ASPN_HUMAN (Q9BXN1) Asporin precursor (Periodontal ligament asso... 31 7.3
RPB1_PLAFD (P14248) DNA-directed RNA polymerase II largest subun... 31 9.5
LIFO_XYLFT (Q87E55) Lipase chaperone (Lipase foldase) (Lipase he... 31 9.5
LIFO_XYLFA (Q9PE46) Lipase chaperone (Lipase foldase) (Lipase he... 31 9.5
>LPRC_HUMAN (P42704) 130 kDa leucine-rich protein (LRP 130) (GP130)
(Leucine-rich PPR-motif containing protein)
Length = 1273
Score = 58.5 bits (140), Expect = 4e-08
Identities = 38/180 (21%), Positives = 81/180 (44%), Gaps = 3/180 (1%)
Query: 257 AERIWEEMSKRRIQHDVVSYASIISCYSKSSKLYRVLQLFEQMKKRNITPDRKVYNAVIF 316
A RIW+ + K +DV Y +++ Y ++ + +M++ NI P+R Y +I
Sbjct: 25 AHRIWDTLQKLGAVYDVSHYNALLKVYLQNEYKFSPTDFLAKMEEANIQPNRVTYQRLIA 84
Query: 317 SLAKNRMVKEAVNLIIKMEDNNVTPDAITYNSLIKPLCKARKIDEAKEIFNVMLERGISP 376
S ++ A ++ M+ ++ +++L+ +A ++ A+ I VM + GI P
Sbjct: 85 SYCNVGDIEGASKILGFMKTKDLPVTEAVFSALVTGHARAGDMENAENILTVMRDAGIEP 144
Query: 377 SIRTFHAFFRILRVK---EEVFELLDKMKELGCNPTIETYIMLIRKFCRWRQLDEVKRIW 433
T+ A K + V + L+K+++ + + +I F + L ++ W
Sbjct: 145 GPDTYLALLNAYAEKGDIDHVKQTLEKVEKFELHLMDRDLLQIIFSFSKAGYLSMSQKFW 204
Score = 38.5 bits (88), Expect = 0.046
Identities = 30/138 (21%), Positives = 56/138 (39%), Gaps = 3/138 (2%)
Query: 348 SLIKPLCKARKIDEAKEIFNVMLERGISPSIRTFHAFFRILRVKEEVF---ELLDKMKEL 404
SL+ L + + A I++ + + G + ++A ++ E F + L KM+E
Sbjct: 11 SLLPELKLEERTEFAHRIWDTLQKLGAVYDVSHYNALLKVYLQNEYKFSPTDFLAKMEEA 70
Query: 405 GCNPTIETYIMLIRKFCRWRQLDEVKRIWNAMREDGIGHDRSSYIVLIHGLFLNCKVEEA 464
P TY LI +C ++ +I M+ + + + L+ G +E A
Sbjct: 71 NIQPNRVTYQRLIASYCNVGDIEGASKILGFMKTKDLPVTEAVFSALVTGHARAGDMENA 130
Query: 465 YKYYIEMQEKGFLPEPKT 482
M++ G P P T
Sbjct: 131 ENILTVMRDAGIEPGPDT 148
>YLE1_SCHPO (Q10451) Hypothetical protein C1093.01 in chromosome I
Length = 1261
Score = 51.6 bits (122), Expect = 5e-06
Identities = 35/168 (20%), Positives = 75/168 (43%), Gaps = 7/168 (4%)
Query: 293 LQLFEQMKKRNITPDRKVYNAVIFSLAKNRMVKEAVNLIIKMEDNNVTPDAITYNSLIKP 352
L +FE+ K+ N+ P +YNAV+ L + R E L +M+++ + P ++TY ++I
Sbjct: 911 LNIFEETKRHNVKPSVFLYNAVLSKLGRARRTTECWKLFQEMKESGLLPTSVTYGTVINA 970
Query: 353 LCKARKIDEAKEIFNVMLER-GISPSIRTFHAFFRI----LRVKEEVFELLDKMKELGCN 407
C+ A+++F M + P + ++ + + +E+ +++
Sbjct: 971 ACRIGDESLAEKLFAEMENQPNYQPRVAPYNTMIQFEVQTMFNREKALFYYNRLCATDIE 1030
Query: 408 PTIETYIMLIRKFCRWRQLD--EVKRIWNAMREDGIGHDRSSYIVLIH 453
P+ TY +L+ + + ++ VK + M + Y IH
Sbjct: 1031 PSSHTYKLLMDAYGTLKPVNVGSVKAVLELMERTDVPILSMHYAAYIH 1078
Score = 49.7 bits (117), Expect = 2e-05
Identities = 56/261 (21%), Positives = 116/261 (43%), Gaps = 22/261 (8%)
Query: 129 SVREYHSMISVLGKMRRFDTAWALVEEMRRGKTGESIVTPQTLLIMIRKYCAVHDVGRAI 188
SV Y++++S LG+ RR W L +EM+ + VT T+ I C + D A
Sbjct: 925 SVFLYNAVLSKLGRARRTTECWKLFQEMKESGLLPTSVTYGTV---INAACRIGDESLAE 981
Query: 189 NTFYAFKRF-NFQVGLYEFQGLLSALCRYKNVQDAEHLLF-----CNKNVFPLDTKSFNI 242
F + N+Q + + ++ + + + E LF C ++ P + ++ +
Sbjct: 982 KLFAEMENQPNYQPRVAPYNTMIQF--EVQTMFNREKALFYYNRLCATDIEP-SSHTYKL 1038
Query: 243 ILNGWCNLI-VSARNAERIWEEMSKRRIQHDVVSYAS-------IISCYSKSSKLYRVLQ 294
+++ + L V+ + + + E M + + + YA+ ++S ++ Y +
Sbjct: 1039 LMDAYGTLKPVNVGSVKAVLELMERTDVPILSMHYAAYIHILGNVVSDVQAATSCY--MN 1096
Query: 295 LFEQMKKRNITPDRKVYNAVIFSLAKNRMVKEAVNLIIKMEDNNVTPDAITYNSLIKPLC 354
+ I D ++ + I SL N + E + ++ M+ NV+ +A N+LIK
Sbjct: 1097 ALAKHDAGEIQLDANLFQSQIESLIANDRIVEGIQIVSDMKRYNVSLNAYIVNALIKGFT 1156
Query: 355 KARKIDEAKEIFNVMLERGIS 375
K I +A+ F+++ G+S
Sbjct: 1157 KVGMISKARYYFDLLECEGMS 1177
Score = 42.4 bits (98), Expect = 0.003
Identities = 31/130 (23%), Positives = 59/130 (44%), Gaps = 2/130 (1%)
Query: 254 ARNAERIWEEMSKRRIQHDVVSYASIISCYSKSSKLYRVLQLFEQMKKRNITPDRKVYNA 313
A A I+EE + ++ V Y +++S ++ + +LF++MK+ + P Y
Sbjct: 907 ATTALNIFEETKRHNVKPSVFLYNAVLSKLGRARRTTECWKLFQEMKESGLLPTSVTYGT 966
Query: 314 VIFSLAKNRMVKEAVNLIIKMEDN-NVTPDAITYNSLIK-PLCKARKIDEAKEIFNVMLE 371
VI + + A L +ME+ N P YN++I+ + ++A +N +
Sbjct: 967 VINAACRIGDESLAEKLFAEMENQPNYQPRVAPYNTMIQFEVQTMFNREKALFYYNRLCA 1026
Query: 372 RGISPSIRTF 381
I PS T+
Sbjct: 1027 TDIEPSSHTY 1036
Score = 33.1 bits (74), Expect = 1.9
Identities = 38/154 (24%), Positives = 57/154 (36%), Gaps = 17/154 (11%)
Query: 346 YNSLIKPLCKARKIDEAKEIF--NVMLERGISPSIRTFHAFFRILRVKEEVFE------- 396
Y +LI L K ++ D + +F + L R IS +F L + +
Sbjct: 810 YPTLISVLSKNKRFDAVQRVFEHSKHLYRKISTKSLEKANWFMALILDAMILSSSFARQF 869
Query: 397 -----LLDKMKELGCNPTIETYIMLIRKFCRWRQLDEVKRIWNAMREDGIGHDRSS---Y 448
D MK LG P T+ LI R D+ N E + + S Y
Sbjct: 870 KSSNLFCDNMKMLGYIPRASTFAHLINNSTRRGDTDDATTALNIFEETKRHNVKPSVFLY 929
Query: 449 IVLIHGLFLNCKVEEAYKYYIEMQEKGFLPEPKT 482
++ L + E +K + EM+E G LP T
Sbjct: 930 NAVLSKLGRARRTTECWKLFQEMKESGLLPTSVT 963
>YG3M_YEAST (P48237) Hypothetical 101.4 kDa protein in RPL24B-RSR1
intergenic region
Length = 864
Score = 42.0 bits (97), Expect = 0.004
Identities = 24/87 (27%), Positives = 43/87 (48%), Gaps = 2/87 (2%)
Query: 304 ITPDRKVYNAVIFSLAKNRMVKEAVNLI--IKMEDNNVTPDAITYNSLIKPLCKARKIDE 361
ITP+++ VI ++ M K+A N +K PD TYN++++ K R +
Sbjct: 316 ITPNKQNLTTVIQFYSRKEMTKQAWNTFDTMKFLSTKHFPDICTYNTMLRICEKERNFPK 375
Query: 362 AKEIFNVMLERGISPSIRTFHAFFRIL 388
A ++F + + I P+ T+ R+L
Sbjct: 376 ALDLFQEIQDHNIKPTTNTYIMMARVL 402
Score = 36.2 bits (82), Expect = 0.23
Identities = 26/104 (25%), Positives = 47/104 (45%), Gaps = 10/104 (9%)
Query: 278 SIISCYSKSSKLYRVLQLFEQMKKRNIT--PDRKVYNAVIFSLAKNRMVKEAVNLIIKME 335
++I YS+ + F+ MK + PD YN ++ K R +A++L +++
Sbjct: 325 TVIQFYSRKEMTKQAWNTFDTMKFLSTKHFPDICTYNTMLRICEKERNFPKALDLFQEIQ 384
Query: 336 DNNVTPDAITYNSLIKPLCKARKIDEAKEIFNVMLERGISPSIR 379
D+N+ P TY + + L A N ++ G S S+R
Sbjct: 385 DHNIKPTTNTYIMMARVL--------ASSSSNAVVSEGKSDSLR 420
Score = 32.3 bits (72), Expect = 3.3
Identities = 50/248 (20%), Positives = 96/248 (38%), Gaps = 30/248 (12%)
Query: 188 INTFYAFKRFNFQVGLYEFQGLLSALCRYKNVQDAEHL-----LFCNKNVFPLDTKSFNI 242
I+ Y ++ + EF L+ +Y HL N +V +T +
Sbjct: 166 IDRLYVSEKRFMDIDSREFSVWLNGTVKYLPFHSILHLDEMLLEQINGDVVKFNTHMYEC 225
Query: 243 ILNGWCNLIVSARNAERIWEEMSKRRIQHDVVSYASIISCYSKSSKLYRVLQLFEQMKKR 302
I N NL + N + +++ ++ ++ Y K+ K+ E++ K+
Sbjct: 226 IFNNLGNLKPTNFNQDGTNDKV--------ILKMKELLERYDKALKITE-----ERINKK 272
Query: 303 NITPDR--KVYNAVIFSLAKNRMVKEAVN----LIIKMEDN-NVTPDAITYNSLIKPLCK 355
P + K+ A++ + K + + I K D+ +TP+ ++I+ +
Sbjct: 273 EGFPSKVPKMTQAILNNCLKYSTKCSSFHDMDYFITKFRDDYGITPNKQNLTTVIQFYSR 332
Query: 356 ARKIDEAKEIFNVM--LERGISPSIRTFHAFFRILRVKEEVFELLDKMKEL---GCNPTI 410
+A F+ M L P I T++ RI + + LD +E+ PT
Sbjct: 333 KEMTKQAWNTFDTMKFLSTKHFPDICTYNTMLRICEKERNFPKALDLFQEIQDHNIKPTT 392
Query: 411 ETYIMLIR 418
TYIM+ R
Sbjct: 393 NTYIMMAR 400
>Y391_HUMAN (O15091) Hypothetical protein KIAA0391
Length = 567
Score = 39.3 bits (90), Expect = 0.027
Identities = 26/94 (27%), Positives = 47/94 (49%), Gaps = 1/94 (1%)
Query: 292 VLQLFEQMKKRNITPDRKVYNAVIFSLAKNRMVKEAVNLIIKMEDNNVTPDAITYNSLIK 351
V+ +FE MK R T + + Y+ +I L + +EA+ L+++ +TP YN I+
Sbjct: 194 VIDVFEIMKARYKTLEPRGYSLLIRGLIHSDRWREAL-LLLEDIKKVITPSKKNYNDCIQ 252
Query: 352 PLCKARKIDEAKEIFNVMLERGISPSIRTFHAFF 385
+ ++ A ++ +L I P + T AFF
Sbjct: 253 GALLHQDVNTAWNLYQELLGHDIVPMLETLKAFF 286
>RPOM_HUMAN (O00411) DNA-directed RNA polymerase, mitochondrial
precursor (EC 2.7.7.6) (MtRPOL)
Length = 1230
Score = 36.2 bits (82), Expect = 0.23
Identities = 20/69 (28%), Positives = 40/69 (56%), Gaps = 4/69 (5%)
Query: 297 EQMKKRNITPDRKVYNAVIFSLAKNRMVKEAVNLIIKMEDNNVTPDAITYNSLIKPLCKA 356
++ K++ +T D +YNAV+ A+ KE V ++ ++D +TPD ++Y + ++ C
Sbjct: 252 QRQKRKLLTLD--MYNAVMLGWARQGAFKELVYVLFMVKDAGLTPDLLSYAAALQ--CMG 307
Query: 357 RKIDEAKEI 365
R+ +A I
Sbjct: 308 RQDQDAGTI 316
>PT09_YEAST (P32522) PET309 protein, mitochondrial precursor
Length = 965
Score = 36.2 bits (82), Expect = 0.23
Identities = 83/429 (19%), Positives = 167/429 (38%), Gaps = 64/429 (14%)
Query: 81 YEIKQKLEDCNVKASSELVVEVLSRVRNDWEAAFTFFLWAGKQPGYDHSVREYHSMISVL 140
+E+ +K + A+ ++++V R ND + AF + P + + + +I +
Sbjct: 404 FELFKKYDITPSTATHTIMLKVY-RGLNDLDGAFRILKRLSEDPSVEITEGHFALLIQMC 462
Query: 141 GKMRRFDTAWALVEEMRRGKTGESIVTPQTLLIMIRKYCAVHDVGRAINTFYAF-KRFNF 199
K A L M + T +++ ++ Y + AI F K ++
Sbjct: 463 CKTTNHLIAQELFNLMTEHYNIQH--TGKSISALMDVYIESNRPTEAIALFEKHSKNLSW 520
Query: 200 QVGLYE-FQGLLSALCRYKNVQDAEHL--------LFCNKNVFPLDTKSFNIILNGWCNL 250
+ GL + + A +N E L L N + + K F + LN C
Sbjct: 521 RDGLISVYNKAIKAYIGLRNANKCEELFDKITTSKLAVNSEFYKMMIK-FLVTLNEDCET 579
Query: 251 IVSARNAERIWEEMSKRR-IQHDVVSYASIISCYSKSSKLYRVLQLFEQMKKRNITPDRK 309
+S I +++ K I+ D + I+ Y K ++ L++ M + + + K
Sbjct: 580 ALS------IIDQLIKHSVIKVDATHFEIIMEAYDKEGYRDGIINLYKTMSQNKVPANSK 633
Query: 310 VYNAVIFSLAK-----NRMVKEAVNLIIKMEDN--NVTPDAITYNSL--------IKPLC 354
+ ++ ++AK N +KE +N++ + +N N T D +TYN L ++ +
Sbjct: 634 ILYYILKAVAKKSLQNNEEIKETINMVEDIMENAANGTLD-VTYNKLHPSVMAWPMRMIV 692
Query: 355 KARKIDEAKEIFN----VMLERGISPSIRTFHAFFRILRVK----------EEVF-ELLD 399
K A E++N + ++ S R L V E +F + +D
Sbjct: 693 KHDSPQRALELYNRYNELFFKKHDWISNNNKFVMMRSLLVLLAQIEQWKDFETLFAKYMD 752
Query: 400 KMKELGCNPTIETYIMLIR------------KFCRWRQLDEVKRIWNAMREDGIGHDRSS 447
+++ + P+ T + +R + ++DE+ +W +RE G D S
Sbjct: 753 RIENIENLPSSTTPNIKLRSIFSGLFPYKVSQLIAMNKIDELPLLWKKLREKGFILDNIS 812
Query: 448 YIVLIHGLF 456
+ + LF
Sbjct: 813 WNSAVEALF 821
Score = 33.5 bits (75), Expect = 1.5
Identities = 37/215 (17%), Positives = 82/215 (37%), Gaps = 8/215 (3%)
Query: 228 CNKNVFPLDTKSFNIILNGWCNLIVSARNAERIWEEMSKRRIQHDVVSYASIISCYSKSS 287
C N+ P+ + IL +C++ + W+ QHD + ++ +S+
Sbjct: 270 CEHNL-PIVSSDLTCILKTYCHMQKFNLVSSTYWKYPDA---QHDQNQFDYLLVAHSRLH 325
Query: 288 KLYRVLQLFEQMKKRNITPDRKVYNAVIFSLAKNRMVKEAVNLIIKMEDNNVTPDAITYN 347
+ Q F + P + Y +++++A+ + L ++ + P
Sbjct: 326 NWDALQQQFNALFGIGKLPSIQHYGILMYTMARIGELDSVNKLYTQLLRRGMIPTYAVLQ 385
Query: 348 SLIKPLCKARKIDEAKEIFNVMLERGISPSIRTFHAFFRILRVKEEVFELLDKMKELGCN 407
SL+ K F + + I+PS T ++ R ++ +K L +
Sbjct: 386 SLLYAHYKVGDFAACFSHFELFKKYDITPSTATHTIMLKVYRGLNDLDGAFRILKRLSED 445
Query: 408 PTIET----YIMLIRKFCRWRQLDEVKRIWNAMRE 438
P++E + +LI+ C+ + ++N M E
Sbjct: 446 PSVEITEGHFALLIQMCCKTTNHLIAQELFNLMTE 480
Score = 33.5 bits (75), Expect = 1.5
Identities = 53/256 (20%), Positives = 104/256 (39%), Gaps = 17/256 (6%)
Query: 104 SRVRNDWEAA---FTFFLWAGKQPGYDHSVREYHSMISVLGKMRRFDTAWALVEEM-RRG 159
SR+ N W+A F GK P S++ Y ++ + ++ D+ L ++ RRG
Sbjct: 322 SRLHN-WDALQQQFNALFGIGKLP----SIQHYGILMYTMARIGELDSVNKLYTQLLRRG 376
Query: 160 KTGESIVTPQTLLIMIRKYCAVHDVGRAINTFYAFKRFNFQVGLYEFQGLLSALCRYKNV 219
I T L ++ + V D + F FK+++ +L ++
Sbjct: 377 M----IPTYAVLQSLLYAHYKVGDFAACFSHFELFKKYDITPSTATHTIMLKVYRGLNDL 432
Query: 220 QDAEHLLF-CNKNVFPLDTKSFNIILNGWCNLIVSARNAERIWEEMSKR-RIQHDVVSYA 277
A +L +++ T+ +L C + A+ ++ M++ IQH S +
Sbjct: 433 DGAFRILKRLSEDPSVEITEGHFALLIQMCCKTTNHLIAQELFNLMTEHYNIQHTGKSIS 492
Query: 278 SIISCYSKSSKLYRVLQLFEQMKKRNITPDR--KVYNAVIFSLAKNRMVKEAVNLIIKME 335
+++ Y +S++ + LFE+ K D VYN I + R + L K+
Sbjct: 493 ALMDVYIESNRPTEAIALFEKHSKNLSWRDGLISVYNKAIKAYIGLRNANKCEELFDKIT 552
Query: 336 DNNVTPDAITYNSLIK 351
+ + ++ Y +IK
Sbjct: 553 TSKLAVNSEFYKMMIK 568
>RPOM_MOUSE (Q8BKF1) DNA-directed RNA polymerase, mitochondrial
precursor (EC 2.7.7.6) (MtRPOL)
Length = 1207
Score = 35.4 bits (80), Expect = 0.39
Identities = 27/136 (19%), Positives = 57/136 (41%), Gaps = 11/136 (8%)
Query: 252 VSARNAERIWEEMSKRR------IQHDVVSYASIISCYSKSSKLYRVLQLFEQMKKRNIT 305
+S+R AE + + +K +Q +++ C + + VL R
Sbjct: 171 LSSREAEALARKKAKAVEAQILVLQQKFLAFFECCVCTGQVPLAHHVLVTHHNNGDRQQV 230
Query: 306 PDRKVYNAVIFSLAKNRMVKEAVNLIIKMEDNNVTPDAITYNSLIKPLCKARKIDEAKEI 365
+YN V+ A+ +E V + + ++D ++PD +Y + ++ C R+ + + I
Sbjct: 231 LTLHMYNTVMLGWARKGSFRELVYVFLMLKDAGLSPDLCSYAAALQ--CMGRRDQDVRTI 288
Query: 366 ---FNVMLERGISPSI 378
M+E G P +
Sbjct: 289 QRCLKQMMEEGFQPQL 304
>YKK5_YEAST (P34250) Hypothetical 125.6 kDa protein in AAT1-GFA1
intergenic region
Length = 1132
Score = 33.5 bits (75), Expect = 1.5
Identities = 24/73 (32%), Positives = 33/73 (44%), Gaps = 2/73 (2%)
Query: 32 ESSSDDDYNEDDGDDDHDKNSSQLHLRDDGFVKD-VKTILDIIHKPG-SGPYEIKQKLED 89
+ + DDD N DD DDD D + + H D ++D V+ DI P P E + ED
Sbjct: 621 DENVDDDENVDDDDDDDDDDDDEYHDSYDVIMRDPVQIEQDISDVPSLKHPSEYSTETED 680
Query: 90 CNVKASSELVVEV 102
K + EV
Sbjct: 681 NKKKEQNSENAEV 693
>SP98_DICDI (Q95ZG4) Spindle pole body component 98 (Spc98)
(DdSpc98) (Fragment)
Length = 812
Score = 33.5 bits (75), Expect = 1.5
Identities = 22/86 (25%), Positives = 45/86 (51%), Gaps = 17/86 (19%)
Query: 28 FFSAESSSDDDYNEDDGDDDHDKNSSQ----------LHLRDDGFVKDVKTILDIIHKPG 77
+++ E DDD + DD DDD D+N +Q L +++ +K+ L+ I+K
Sbjct: 412 YYNQEDDDDDDEDHDDNDDD-DENENQGEDDEIIERKLLIKESKIIKEKTKELNYINK-- 468
Query: 78 SGPYEIKQKLEDCNVKASSELVVEVL 103
E+ Q++ + + SSE +++++
Sbjct: 469 ----EVLQEIIELVSRQSSERLLKIV 490
>MYS3_HUMAN (Q92794) MYST histone acetyltransferase 3 (Runt-related
transcription factor binding protein 2) (Monocytic
leukemia zinc finger protein) (Zinc finger protein 220)
Length = 2004
Score = 33.5 bits (75), Expect = 1.5
Identities = 19/70 (27%), Positives = 38/70 (54%), Gaps = 11/70 (15%)
Query: 30 SAESSSDDDYNEDDGDDDHDKNSSQLHLRDDGFVKDVKTILDIIHKPGSGPYEIKQKLED 89
+AE++ +DD++ DD DD H +++ + L + +DVK +PG +++ D
Sbjct: 1305 AAETAQNDDHDADDEDDGHLESTKKKELEEQPTREDVK------EEPG-----VQESFLD 1353
Query: 90 CNVKASSELV 99
N++ S E +
Sbjct: 1354 ANMQKSREKI 1363
>MUTL_BUCBP (Q89A38) DNA mismatch repair protein mutL
Length = 597
Score = 33.1 bits (74), Expect = 1.9
Identities = 32/136 (23%), Positives = 55/136 (39%), Gaps = 20/136 (14%)
Query: 232 VFPLDTKSFNIILNGWCNLIVSARNAERIWEE-------MSKRRIQHDVVSYASIISCYS 284
V P+D + + GW L+ S +++ ++ + R + H V S I+ Y
Sbjct: 225 VVPVDYFLNTMKITGWLYLLGSYHTSKKKFQYFYINGRIILNRSVHHAVYQAVSEINHYQ 284
Query: 285 KSSKLYRVLQLFEQMKKRNITPDRKVYN-------------AVIFSLAKNRMVKEAVNLI 331
S L+L NI P +K+ A+++SL K ++K+ I
Sbjct: 285 YSVSYILYLKLNCNELDVNIHPAKKIIKIINIRLIHVFICQAILYSLKKECILKKDCTKI 344
Query: 332 IKMEDNNVTPDAITYN 347
IK NN + + YN
Sbjct: 345 IKNISNNKKKNNLNYN 360
>MAD3_YEAST (P47074) Spindle assembly checkpoint component MAD3
(Mitotic MAD3 protein)
Length = 515
Score = 32.3 bits (72), Expect = 3.3
Identities = 15/45 (33%), Positives = 27/45 (59%)
Query: 361 EAKEIFNVMLERGISPSIRTFHAFFRILRVKEEVFELLDKMKELG 405
E+++IF ML GI + +F+ F L +++E F+ K+ +LG
Sbjct: 144 ESRDIFMYMLRNGIGSELASFYEEFTNLLIQKEKFQYAVKILQLG 188
>SRB9_YEAST (P38931) Suppressor of RNA polymerase B SRB9 (SCA1
protein)
Length = 1420
Score = 32.0 bits (71), Expect = 4.3
Identities = 24/91 (26%), Positives = 40/91 (43%), Gaps = 5/91 (5%)
Query: 6 NAFNSSNYYTFFAPPK---FSFSVRFFSAESSSDDDYNEDDGDDDHDKNSSQLHLRDDGF 62
N + S ++F K +F + SS +++ E++G D D S L++RDD
Sbjct: 625 NKYKSGGKFSFSPLQKEEALNFDISMADLSSSEEEEDEEENGSSDEDLKS--LNVRDDMK 682
Query: 63 VKDVKTILDIIHKPGSGPYEIKQKLEDCNVK 93
D + IH+P Y L+D +K
Sbjct: 683 PSDNISTNTNIHEPQYINYSSIPSLQDSIIK 713
>RFAY_ECOLI (P27240) Lipopolysaccharide core biosynthesis protein
rfaY
Length = 232
Score = 32.0 bits (71), Expect = 4.3
Identities = 28/109 (25%), Positives = 53/109 (47%), Gaps = 17/109 (15%)
Query: 329 NLIIKMEDNN-----VTPDAITYN-SLIKPLCKARKIDEAKEI-----FNVMLERGISPS 377
+L++ ++NN V D ++YN ++IK R ID+ K + + ++ + SP
Sbjct: 9 DLVVFTDENNSKYLNVLNDFLSYNINIIKVF---RSIDDTKVMLIDTDYGKLILKVFSPK 65
Query: 378 IRTFHAFFRILR---VKEEVFELLDKMKELGCNPTIETYIMLIRKFCRW 423
++ FF+ L E +FE K++ G N + Y++ RK R+
Sbjct: 66 VKRNERFFKSLLKGDYYERLFEQTQKVRNEGLNTLNDFYLLAERKTLRF 114
>YH32_AQUAE (O67622) Hypothetical UPF0144 protein AQ_1732
Length = 558
Score = 31.2 bits (69), Expect = 7.3
Identities = 32/134 (23%), Positives = 63/134 (46%), Gaps = 8/134 (5%)
Query: 249 NLIVSARNAERIWEEMSKRRIQHDVVSYASIISCYSKSSKLYR--VLQLFEQMK--KRNI 304
N++ R+ +R WE + KR + +++ + + +S + +R + E++K K +
Sbjct: 114 NVLAKERHLDRRWEALEKR--EEELLHRERELKDFERSLERWRDEIRHKEEELKHMKEEV 171
Query: 305 TPDRKVYNAVIFSLAKNRMVKEAVNLIIKMEDNNVTPDAITYNSLIKPLCKARKIDEAKE 364
+K + +AK + +EA IIK + DA+ +I+ K R EAK+
Sbjct: 172 EELKKKELEELQRIAKLTL-EEARQEIIKKVEEEAKKDAVKLMKVIEEDAKRRAEFEAKK 230
Query: 365 IFNVMLERGISPSI 378
I +R ++P I
Sbjct: 231 IIATATQR-LAPQI 243
>Y136_ARCFU (O30101) Hypothetical protein AF0136
Length = 185
Score = 31.2 bits (69), Expect = 7.3
Identities = 31/104 (29%), Positives = 48/104 (45%), Gaps = 8/104 (7%)
Query: 390 VKEEVFELLDKMKEL--GCNPTIETYIMLIRKFCRWRQLDEVKRIWNAMREDGIGHDRSS 447
+ EE F +++K K G N IE + L+ + R D++ I D G RS
Sbjct: 10 LSEEAFRIIEKFKPDYGGINEVIEAALKLLNREDRNLSEDDILLIRLIRDLDFTGCGRSQ 69
Query: 448 YIVLIHGLFLNCKVEEAYK-YYIEMQEKGFLPEPKTESMLQAWL 490
Y+ LI G +E+A K +E + FL +P E L+ +L
Sbjct: 70 YMHLICG-----DIEKAVKESMMETAVEWFLKKPFAEIELEEFL 108
>ASPN_HUMAN (Q9BXN1) Asporin precursor (Periodontal ligament
associated protein-1) (PLAP-1) (UNQ215/PRO241)
Length = 379
Score = 31.2 bits (69), Expect = 7.3
Identities = 13/37 (35%), Positives = 19/37 (51%)
Query: 16 FFAPPKFSFSVRFFSAESSSDDDYNEDDGDDDHDKNS 52
FF+P + +DDD ++DD DDD + NS
Sbjct: 18 FFSPSHIALKNMMLKDMEDTDDDDDDDDDDDDDEDNS 54
>RPB1_PLAFD (P14248) DNA-directed RNA polymerase II largest subunit
(EC 2.7.7.6)
Length = 2452
Score = 30.8 bits (68), Expect = 9.5
Identities = 13/33 (39%), Positives = 21/33 (63%)
Query: 36 DDDYNEDDGDDDHDKNSSQLHLRDDGFVKDVKT 68
DD ++D DDD+D N S + +++D V +KT
Sbjct: 1806 DDGDVDNDNDDDNDDNKSDITIKEDNDVAFMKT 1838
>LIFO_XYLFT (Q87E55) Lipase chaperone (Lipase foldase) (Lipase
helper protein) (Lipase activator protein) (Lipase
modulator)
Length = 353
Score = 30.8 bits (68), Expect = 9.5
Identities = 17/48 (35%), Positives = 29/48 (60%)
Query: 297 EQMKKRNITPDRKVYNAVIFSLAKNRMVKEAVNLIIKMEDNNVTPDAI 344
EQ KKR + ++K+ + V K + ++AV II+++ + VTPD I
Sbjct: 227 EQKKKRLVALEQKLPSKVQEERIKIQQQQDAVVKIIQLQKDEVTPDGI 274
>LIFO_XYLFA (Q9PE46) Lipase chaperone (Lipase foldase) (Lipase
helper protein) (Lipase activator protein) (Lipase
modulator)
Length = 350
Score = 30.8 bits (68), Expect = 9.5
Identities = 17/48 (35%), Positives = 29/48 (60%)
Query: 297 EQMKKRNITPDRKVYNAVIFSLAKNRMVKEAVNLIIKMEDNNVTPDAI 344
EQ KKR + ++K+ + V K + ++AV II+++ + VTPD I
Sbjct: 227 EQKKKRLVALEQKLPSKVQEERIKIQQQQDAVVKIIQLQKDEVTPDGI 274
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.322 0.137 0.408
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 64,481,560
Number of Sequences: 164201
Number of extensions: 2699199
Number of successful extensions: 9731
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 9643
Number of HSP's gapped (non-prelim): 63
length of query: 550
length of database: 59,974,054
effective HSP length: 115
effective length of query: 435
effective length of database: 41,090,939
effective search space: 17874558465
effective search space used: 17874558465
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 68 (30.8 bits)
Medicago: description of AC123593.8