BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC122729.6 + phase: 0 /pseudo
(247 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ITAE_HUMAN (P38570) Integrin alpha-E precursor (Mucosal lymphocy... 39 0.009
A32E_HUMAN (Q9BTT0) Acidic leucine-rich nuclear phosphoprotein 3... 39 0.009
NRDC_RAT (P47245) Nardilysin precursor (EC 3.4.24.61) (N-arginin... 36 0.075
ECX1_METMA (Q8PTT8) Probable exosome complex exonuclease 1 (EC 3... 35 0.17
MP62_LYTPI (P91753) Mitotic apparatus protein p62 33 0.64
YQ28_BORBU (O50999) Hypothetical ANK-repeat protein BBB28 33 0.83
SCPA_MYCGA (Q7NB76) Segregation and condensation protein A 33 0.83
VP5_BTV11 (P33476) Outer capsid protein VP5 32 1.1
MYS2_SCHPO (Q9USI6) Myosin type II heavy chain 1 32 1.1
NRDC_MOUSE (Q8BHG1) Nardilysin precursor (EC 3.4.24.61) (N-argin... 32 1.4
MYS4_YEAST (P32492) Myosin-4 isoform 32 1.4
ENGA_CAMJE (Q9PIB6) GTP-binding protein engA 32 1.4
PHPA_PLACH (Q02752) Acidic phosphoprotein precursor (50 kDa anti... 32 1.9
YK05_YEAST (P36121) Hypothetical 32.1 kDa protein in DBP7-GCN3 i... 31 2.4
S521_RAT (Q9QY02) Putative splicing factor YT521 (RA301-binding ... 31 2.4
NRDC_HUMAN (O43847) Nardilysin precursor (EC 3.4.24.61) (N-argin... 31 2.4
FKB3_YEAST (P38911) FK506-binding nuclear protein (EC 5.2.1.8) (... 31 2.4
ASF1_YEAST (P32447) Anti-silencing protein 1 31 2.4
YA54_METJA (Q58454) Hypothetical protein MJ1054 (EC 1.1.1.-) [Co... 31 3.2
DP2L_METMA (Q8PXH2) DNA polymerase II large subunit (EC 2.7.7.7)... 31 3.2
>ITAE_HUMAN (P38570) Integrin alpha-E precursor (Mucosal
lymphocyte-1 antigen) (HML-1 antigen) (CD103 antigen)
(Integrin alpha-IEL)
Length = 1179
Score = 39.3 bits (90), Expect = 0.009
Identities = 32/134 (23%), Positives = 62/134 (45%), Gaps = 13/134 (9%)
Query: 32 EEEREDIYESFEDETLEKPIYDEEYVGADICEVFDEEGNIDPIYDENGLDDIHEAFEKEE 91
E+E E+ E EDE +EE G +I + D G+IDP + D I
Sbjct: 181 EKEEEEDKEEEEDE-------EEEEAGTEIAIILDGSGSIDPPDFQRAKDFISNMM--RN 231
Query: 92 HNEPIYDEEYVLAEYGEYLETKKRFQTSTNKDMFLMSSSITKVVKMLHQTI*KKS*SSE* 151
E ++ + L +YG ++T+ F ++D+ + + + ++ ++ K + + +
Sbjct: 232 FYEKCFECNFALVQYGGVIQTE--FDLRDSQDVMASLARVQNITQV--GSVTKTASAMQH 287
Query: 152 LITKIHTSCNGSTR 165
++ I TS +GS R
Sbjct: 288 VLDSIFTSSHGSRR 301
>A32E_HUMAN (Q9BTT0) Acidic leucine-rich nuclear phosphoprotein 32
family member E (LANP-like protein) (LANP-L)
Length = 268
Score = 39.3 bits (90), Expect = 0.009
Identities = 27/85 (31%), Positives = 41/85 (47%), Gaps = 1/85 (1%)
Query: 16 NYKAVTIVNREINNIFEEEREDIYESFEDETLEKPIYDEEYVGADICEVFDEEGNIDPIY 75
N K++ + N EI N+ E+ RE I+E + T E+ D E DE+G+ D
Sbjct: 114 NLKSLDLFNCEITNL-EDYRESIFELLQQITYLDGFDQEDNEAPDSEEEDDEDGDEDDEE 172
Query: 76 DENGLDDIHEAFEKEEHNEPIYDEE 100
+E E +E+EE E DE+
Sbjct: 173 EEENEAGPPEGYEEEEEEEEEEDED 197
Score = 30.8 bits (68), Expect = 3.2
Identities = 24/68 (35%), Positives = 33/68 (48%), Gaps = 9/68 (13%)
Query: 31 FEEEREDIYESFEDETLEKPIYDEEYVGADICEVFDEEGNI----DPIYDENGLDDIHEA 86
+EEE E+ E EDE DE+ G+++ E +E G + I DE DD E
Sbjct: 184 YEEEEEEEEEEDEDED-----EDEDEAGSELGEGEEEVGLSYLMKEEIQDEEDDDDYVEE 238
Query: 87 FEKEEHNE 94
E+EE E
Sbjct: 239 GEEEEEEE 246
>NRDC_RAT (P47245) Nardilysin precursor (EC 3.4.24.61) (N-arginine
dibasic convertase) (NRD convertase) (NRD-C)
Length = 1161
Score = 36.2 bits (82), Expect = 0.075
Identities = 29/85 (34%), Positives = 42/85 (49%), Gaps = 13/85 (15%)
Query: 32 EEEREDIYESFEDETLEKPIYDEEYVGADICEVFDEEGNIDPIYDENGLDDIHEAFEKEE 91
EEE E+ E E+E + D+E GA+I + DE G DD E F+ +E
Sbjct: 144 EEEEEEEGEEEEEEEEDDDDDDDEDSGAEIQDD-----------DEEGFDD-EEEFDDDE 191
Query: 92 HNEPIYD-EEYVLAEYGEYLETKKR 115
H++ D EE L E E +E +K+
Sbjct: 192 HDDDDLDNEENELEELEERVEARKK 216
>ECX1_METMA (Q8PTT8) Probable exosome complex exonuclease 1 (EC
3.1.13.-)
Length = 493
Score = 35.0 bits (79), Expect = 0.17
Identities = 30/97 (30%), Positives = 40/97 (40%), Gaps = 14/97 (14%)
Query: 23 VNREINNIFEEEREDIY---ESFEDETLEKPIYDEEYVGADICEVFDEEGNIDPIYDENG 79
+ EI EE ED+ E FE+E LE+ EE + D+ E EE
Sbjct: 303 LEEEIEEELEESEEDLETEEEEFEEEALEEEAEPEEDLEEDLEEDLGEE----------- 351
Query: 80 LDDIHEAFEKEEHNEPIYDEEYVLAEYGEYLETKKRF 116
L++ E E+EE E +EE L E K F
Sbjct: 352 LEEEEEELEEEEFEEEALEEETELEASLECAPELKEF 388
>MP62_LYTPI (P91753) Mitotic apparatus protein p62
Length = 411
Score = 33.1 bits (74), Expect = 0.64
Identities = 31/94 (32%), Positives = 43/94 (44%), Gaps = 7/94 (7%)
Query: 32 EEEREDIYESFEDETLEKPIYDEEY-VGADICEVFDEEGNIDPIYDENGLDDIHEAFEKE 90
EEE E EDE E+ DEE +G D E DEE + DE G+DD E E+E
Sbjct: 265 EEEATSGEEEEEDEEEEEEEDDEEMALGDDDDEDDDEEDD----EDEEGMDDEDE--EEE 318
Query: 91 EHNEPIYDEEYVLAEYGEYLETKKRFQTSTNKDM 124
E + P+ + + + K ++ NK M
Sbjct: 319 EDSSPVKPAKKAKGKVNGTAKPKGTPKSQANKGM 352
>YQ28_BORBU (O50999) Hypothetical ANK-repeat protein BBB28
Length = 414
Score = 32.7 bits (73), Expect = 0.83
Identities = 19/59 (32%), Positives = 29/59 (48%), Gaps = 1/59 (1%)
Query: 66 DEEGNIDPI-YDENGLDDIHEAFEKEEHNEPIYDEEYVLAEYGEYLETKKRFQTSTNKD 123
DE+ I PI Y +N +D + +E+ + + EYG Y+E KK+ Q T D
Sbjct: 244 DEKNIITPIEYYKNNIDMSPYYIDLQENKDDFLKAIKIKKEYGLYIEKKKQLQNLTEND 302
>SCPA_MYCGA (Q7NB76) Segregation and condensation protein A
Length = 599
Score = 32.7 bits (73), Expect = 0.83
Identities = 28/147 (19%), Positives = 64/147 (43%), Gaps = 33/147 (22%)
Query: 10 IAIDCVNYKAVTIVNREINNIFEE--EREDIYESFEDETLEKPIYDEEYV---------G 58
++I+ V + ++I+ + +NN ++ + E I+E + + L + +V
Sbjct: 358 LSIEDVKNEILSIIKKLLNNQYDRFIDLEKIFEQIDPKKLNLRYFVTSFVCLLILVREQK 417
Query: 59 ADICEVFDEEGN----IDPIYDENGLDDIHEAFEKEEHNEPIYDE--------------- 99
D+ + D+E +DP N + I E ++++ +E E
Sbjct: 418 IDLNQKNDDESISACLVDPTKIVNSQESIQEVIQRQQEDEKALKESIKQIQEERKQSFFK 477
Query: 100 ---EYVLAEYGEYLETKKRFQTSTNKD 123
EY+ +YGEY +++++Q T ++
Sbjct: 478 QREEYLKKKYGEYYVSREQYQKLTPEE 504
>VP5_BTV11 (P33476) Outer capsid protein VP5
Length = 526
Score = 32.3 bits (72), Expect = 1.1
Identities = 23/91 (25%), Positives = 44/91 (48%), Gaps = 4/91 (4%)
Query: 24 NREINNIFEEEREDIYESFEDETLEKPIYDEEYVGADICEVFDEEGNIDPIYDENGLDDI 83
N+EI F +E E++Y+ E E+ + E+Y + +C+ D I D + +
Sbjct: 116 NKEITKEFGKELEEVYDFMNGEAKEEEVVQEQY--SMLCKAVDSYEKILKAEDSK-MAML 172
Query: 84 HEAFEKEEHNEPIYDEEYVLAEYGEYLETKK 114
A ++E +E DE ++ EY + ++ K
Sbjct: 173 ARALQREA-SERSQDEIKMVKEYRQKIDALK 202
>MYS2_SCHPO (Q9USI6) Myosin type II heavy chain 1
Length = 1526
Score = 32.3 bits (72), Expect = 1.1
Identities = 27/107 (25%), Positives = 49/107 (45%), Gaps = 17/107 (15%)
Query: 34 EREDIYESFEDETLEKPIYDEEYVGADICEVFDEEGNIDPIYDENGLDDIHEAFEK--EE 91
E ++I+E+ + + Y ++Y G + D GL D+ F++ ++
Sbjct: 1152 ELQEIHENLLLKVSDLENYKKKYEGLQL--------------DLEGLKDVDTNFQELSKK 1197
Query: 92 HNEPIYDEEYVLAEYGEYLETKKRFQTSTNKDMFLMSSSITKVVKML 138
H + ++ E +L + Y E K +S NKD+ SS+TK V L
Sbjct: 1198 HRDLTFNHESLLRQSASYKE-KLSLASSENKDLSNKVSSLTKQVNEL 1243
>NRDC_MOUSE (Q8BHG1) Nardilysin precursor (EC 3.4.24.61) (N-arginine
dibasic convertase) (NRD convertase) (NRD-C)
Length = 1161
Score = 32.0 bits (71), Expect = 1.4
Identities = 26/84 (30%), Positives = 42/84 (49%), Gaps = 8/84 (9%)
Query: 32 EEEREDIYESFEDETLEKPIYDEEYVGADICEVFDEEGNIDPIYDENGLDDIHEAFEKEE 91
EEE E+ E +D+ + D+E GA+I + D+E D DE DD + E
Sbjct: 141 EEEEEEEEEEEDDDDDDDDDDDDEDSGAEIQD--DDEEGFD---DEEEFDDDD---DDEH 192
Query: 92 HNEPIYDEEYVLAEYGEYLETKKR 115
++ + +EE L E E +E +K+
Sbjct: 193 DDDDLENEENELEELEERVEARKK 216
>MYS4_YEAST (P32492) Myosin-4 isoform
Length = 1471
Score = 32.0 bits (71), Expect = 1.4
Identities = 29/120 (24%), Positives = 54/120 (44%), Gaps = 10/120 (8%)
Query: 14 CVNY---KAVTIVNREINNIFEEE--REDIYESFEDETLEKPIYDEEYVGADICEVFDEE 68
C+NY K N+ + + +EE +E+I SF + + +P D I + DEE
Sbjct: 465 CINYANEKLQQEFNQHVFKLEQEEYVKEEIEWSFIEFSDNQPCIDLIENKLGILSLLDEE 524
Query: 69 GNIDPIYDENGLDDIHEAFEKEEHNE----PIYDE-EYVLAEYGEYLETKKRFQTSTNKD 123
+ DE+ ++ AF K NE P + + +++++ Y +E + N+D
Sbjct: 525 SRLPSGSDESWASKLYSAFNKPPSNEVFSKPRFGQTKFIVSHYAVDVEYEVEGFIEKNRD 584
>ENGA_CAMJE (Q9PIB6) GTP-binding protein engA
Length = 460
Score = 32.0 bits (71), Expect = 1.4
Identities = 19/40 (47%), Positives = 24/40 (59%), Gaps = 1/40 (2%)
Query: 79 GLDDIHEAFEKEEHNE-PIYDEEYVLAEYGEYLETKKRFQ 117
GLD+++E EK H E I DEE L ++ EY E K FQ
Sbjct: 148 GLDELYEWLEKFLHEEFLIPDEEENLEDFLEYYEEGKEFQ 187
>PHPA_PLACH (Q02752) Acidic phosphoprotein precursor (50 kDa
antigen)
Length = 441
Score = 31.6 bits (70), Expect = 1.9
Identities = 32/127 (25%), Positives = 55/127 (43%), Gaps = 11/127 (8%)
Query: 17 YKAVTIVNREINNIFEEEREDIYESFE---DETLEKPIYDEEYVGADICEVFDEEGNIDP 73
Y A T+ + + EEE E+ E +E E D+E + ++ +FD++ + D
Sbjct: 275 YDAGTLNEYDAGTLNEEEGSTTNEAGEGTSNEAGEGTANDDEELDEEVASIFDDDEHADD 334
Query: 74 I----YDENGLDDIHEAFEKEEHNEPIYDEEYVLAEYGEYLETKKRFQTSTNKDMFLMSS 129
+ YDEN ++ E +K NE E+ GE KK+ + + K + +
Sbjct: 335 LSLLDYDENS-NENQENVKKGNENE---GEQKGNENEGEQKGKKKKAKEKSKKKVKNKPT 390
Query: 130 SITKVVK 136
TK K
Sbjct: 391 MTTKKKK 397
>YK05_YEAST (P36121) Hypothetical 32.1 kDa protein in DBP7-GCN3
intergenic region
Length = 282
Score = 31.2 bits (69), Expect = 2.4
Identities = 20/48 (41%), Positives = 27/48 (55%), Gaps = 1/48 (2%)
Query: 53 DEEYVGADICEVFDEEGNIDPIYDENGLDDIHEAFEKEEHNEPIYDEE 100
DEE D +V DE +ID I DENG + A E+EE +E + E+
Sbjct: 13 DEEDRTQDRADVEDESNDIDMIADENGTNSA-IANEQEEKSEEVKAED 59
>S521_RAT (Q9QY02) Putative splicing factor YT521 (RA301-binding
protein)
Length = 738
Score = 31.2 bits (69), Expect = 2.4
Identities = 28/104 (26%), Positives = 45/104 (42%), Gaps = 10/104 (9%)
Query: 28 NNIFEEEREDIYESFEDETLEKPIYDEEYVGADICEVFDEEGNIDPIYDENGLDDIHEAF 87
NN EE + EDE +++ D+E V D E DEE DE D+ E
Sbjct: 195 NNTENEEEGGEEDVEEDEEVDEDGDDDEEVDEDAEEEEDEE------EDEEEEDEEEEEE 248
Query: 88 EKEEHNEPIYDEEYVLAEYGEYLETKKRFQTSTNKDMFLMSSSI 131
E+EE+ + D++ E G +T+ S ++ + S+
Sbjct: 249 EEEEYEQDERDQK----EEGNDYDTRSEASDSGSESVSFTDGSV 288
>NRDC_HUMAN (O43847) Nardilysin precursor (EC 3.4.24.61) (N-arginine
dibasic convertase) (NRD convertase) (NRD-C)
Length = 1150
Score = 31.2 bits (69), Expect = 2.4
Identities = 19/57 (33%), Positives = 30/57 (52%)
Query: 32 EEEREDIYESFEDETLEKPIYDEEYVGADICEVFDEEGNIDPIYDENGLDDIHEAFE 88
EEE E E +DE I D++ G D + FD+E + D ++N L+++ E E
Sbjct: 144 EEEEEVEEEEDDDEDSGAEIEDDDEEGFDDEDEFDDEHDDDLDTEDNELEELEERAE 200
>FKB3_YEAST (P38911) FK506-binding nuclear protein (EC 5.2.1.8)
(Peptidyl-prolyl cis-trans isomerase) (PPIase) (Proline
rotamase) (Nucleolar proline isomerase) (FKBP-70)
Length = 411
Score = 31.2 bits (69), Expect = 2.4
Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 8/87 (9%)
Query: 32 EEEREDIYESFEDETLEKPIYDEEYVGADICEVFDEEG---NIDPIYDENGLDDIHEAFE 88
E+E DIY+S ED L ++E +G D+ ++ DEE I+ + +E+ D+ E +
Sbjct: 177 EDEDADIYDS-EDYDLTPD--EDEIIGDDMDDLDDEEEEEVRIEEVQEEDEEDNDGEEEQ 233
Query: 89 KEEHNEPIYDEEYVLAEYGEYLETKKR 115
+EE E +E V E + + KKR
Sbjct: 234 EEEEEEE--QKEEVKPEPKKSKKEKKR 258
>ASF1_YEAST (P32447) Anti-silencing protein 1
Length = 279
Score = 31.2 bits (69), Expect = 2.4
Identities = 33/106 (31%), Positives = 42/106 (39%), Gaps = 10/106 (9%)
Query: 16 NYKAVTIVNREINNIFEEE-REDIYESFEDETLEKPIYDEEYVGADICEVFDEEGNIDPI 74
N A V+ + NI E+ R + D E +Y E G D E D+E D
Sbjct: 125 NPPAKVQVDHIVRNILAEKPRVTRFNIVWDNENEGDLYPPEQPGVDDEEEEDDEEEDDDE 184
Query: 75 YDENGLDDIHE---------AFEKEEHNEPIYDEEYVLAEYGEYLE 111
DE+ DD E A E+EE E D E L E E +E
Sbjct: 185 DDEDDEDDDQEDGEGEAEEAAEEEEEEEEKTEDNETNLEEEEEDIE 230
>YA54_METJA (Q58454) Hypothetical protein MJ1054 (EC 1.1.1.-)
[Contains: Mja UDPGD intein]
Length = 895
Score = 30.8 bits (68), Expect = 3.2
Identities = 22/92 (23%), Positives = 45/92 (48%), Gaps = 6/92 (6%)
Query: 6 GYGHIAIDCVNYKAVTIVNREINNIFEEEREDIYESFEDETLE-----KPIYDEEYVGAD 60
G+ + ID ++ V +NR ++EE E + + ++ L KPI D + +
Sbjct: 23 GFDVVGID-IDESKVKALNRGECPLYEEGLEGLLKKHVNKNLTFTTSYKPIKDSDVIFLC 81
Query: 61 ICEVFDEEGNIDPIYDENGLDDIHEAFEKEEH 92
+ D++GN D + + ++ I E +KE++
Sbjct: 82 VGTPQDKDGNADLRFLFSAVEKIKETIDKEDY 113
>DP2L_METMA (Q8PXH2) DNA polymerase II large subunit (EC 2.7.7.7)
(Pol II)
Length = 1152
Score = 30.8 bits (68), Expect = 3.2
Identities = 14/32 (43%), Positives = 20/32 (61%)
Query: 80 LDDIHEAFEKEEHNEPIYDEEYVLAEYGEYLE 111
+DDI EA+E + E I D +L YG++LE
Sbjct: 390 VDDIKEAYEVRQQVEVIVDIGEILINYGDFLE 421
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.331 0.144 0.442
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,986,074
Number of Sequences: 164201
Number of extensions: 1185455
Number of successful extensions: 5054
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 28
Number of HSP's that attempted gapping in prelim test: 4964
Number of HSP's gapped (non-prelim): 67
length of query: 247
length of database: 59,974,054
effective HSP length: 107
effective length of query: 140
effective length of database: 42,404,547
effective search space: 5936636580
effective search space used: 5936636580
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 64 (29.3 bits)
Medicago: description of AC122729.6